modified: src1/input.c
[GalaxyCodeBases.git] / c_cpp / lib / htslib / test / c1#unknown.sam
blob1f1616a2f24e4b1ba1edeb94b849d08e6f1a8cc1
1 @SQ     SN:c1   LN:10
2 @CO     Tests permuations of seq / qual being present or "*" in mapped
3 @CO     and unmapped forms.  Also tests MD/NM tag generation.
4 _sqm    0       c1      1       0       2M1I4M1D3M      *       0       0       AACCCTCGTT      IIIIIIIIII      MD:Z:4G1^G3     NM:i:3
5 _sm     0       c1      1       0       2M1I4M1D3M      *       0       0       AACCCTCGTT      *       MD:Z:4G1^G3     NM:i:3
6 _m      0       c1      1       0       2M1I4M1D3M      *       0       0       *       *       MD:Z:4G1^G3     NM:i:3
7 _squ    4       c1      1       0       *       *       0       0       AACCCTCGTT      IIIIIIIIII
8 _su     4       c1      1       0       *       *       0       0       AACCCTCGTT      *
9 _u      4       c1      1       0       *       *       0       0       *       *