pkgs/development/python-modules/pydicom-seg/default.nix

   1 {
   2   lib,
   3   buildPythonPackage,
   4   fetchFromGitHub,
   5   fetchpatch,
   6   pythonOlder,
   7   pytest7CheckHook,
   8   poetry-core,
   9   jsonschema,
  10   numpy,
  11   pydicom,
  12   simpleitk,
  13 }:
  14
  15 buildPythonPackage rec {
  16   pname = "pydicom-seg";
  17   version = "0.4.1";
  18   pyproject = true;
  19
  20   disabled = pythonOlder "3.7";
  21
  22   src = fetchFromGitHub {
  23     owner = "razorx89";
  24     repo = pname;
  25     rev = "refs/tags/v${version}";
  26     hash = "sha256-2Y3fZHKfZqdp5EU8HfVsmJ5JFfVGZuAR7+Kj7qaTiPM=";
  27     fetchSubmodules = true;
  28   };
  29
  30   patches = [
  31     # https://github.com/razorx89/pydicom-seg/pull/54
  32     (fetchpatch {
  33       name = "replace-poetry-with-poetry-core.patch";
  34       url = "https://github.com/razorx89/pydicom-seg/commit/ac91eaefe3b0aecfe745869972c08de5350d2b61.patch";
  35       hash = "sha256-xBOVjWZPjyQ8gSj6JLe9B531e11TI3FUFFtL+IelZOM=";
  36     })
  37   ];
  38
  39   pythonRelaxDeps = [ "jsonschema" ];
  40
  41   build-system = [ poetry-core ];
  42
  43   dependencies = [
  44     jsonschema
  45     numpy
  46     pydicom
  47     simpleitk
  48   ];
  49
  50   nativeCheckInputs = [ pytest7CheckHook ];
  51
  52   pythonImportsCheck = [ "pydicom_seg" ];
  53
  54   meta = with lib; {
  55     description = "Medical segmentation file reading and writing";
  56     homepage = "https://github.com/razorx89/pydicom-seg";
  57     changelog = "https://github.com/razorx89/pydicom-seg/releases/tag/v${version}";
  58     license = licenses.mit;
  59     maintainers = with maintainers; [ bcdarwin ];
  60   };
  61 }