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updated on Thu Jan 26 12:02:26 UTC 2012
[aur-mirror.git] / ncbi-toolkit / include_string_h.patch
blob44a96b4c1dbaeed70bd879fcf485fb3f5b799656
1 diff -ur ncbisrc/include/algo/align/nw/nw_spliced_aligner.hpp ncbisrc2/include/algo/align/nw/nw_spliced_aligner.hpp
2 --- ncbisrc/include/algo/align/nw/nw_spliced_aligner.hpp 2008-05-08 16:53:46.000000000 -0700
3 +++ ncbisrc2/include/algo/align/nw/nw_spliced_aligner.hpp 2009-03-30 08:06:47.600674999 -0700
4 @@ -34,7 +34,7 @@
5 */
6
7 #include "nw_band_aligner.hpp"
8 -
9 +#include <string.h>
10
11 /** @addtogroup AlgoAlignSpliced
12 *
13 Only in ncbisrc2/include/algo/align/nw: nw_spliced_aligner.hpp~
14 diff -ur ncbisrc/include/algo/text/text_util.hpp ncbisrc2/include/algo/text/text_util.hpp
15 --- ncbisrc/include/algo/text/text_util.hpp 2007-09-24 04:48:04.000000000 -0700
16 +++ ncbisrc2/include/algo/text/text_util.hpp 2009-03-30 08:06:24.728575320 -0700
17 @@ -36,7 +36,7 @@
18 #include <corelib/hash_map.hpp>
19 #include <corelib/hash_set.hpp>
20 #include <util/simple_buffer.hpp>
21 -
22 +#include <string.h>
23 #include <algo/text/vector.hpp>
24
25
26 Only in ncbisrc2/include/algo/text: text_util.hpp~
27 diff -ur ncbisrc/include/bdb/bdb_expt.hpp ncbisrc2/include/bdb/bdb_expt.hpp
28 --- ncbisrc/include/bdb/bdb_expt.hpp 2007-09-11 06:00:53.000000000 -0700
29 +++ ncbisrc2/include/bdb/bdb_expt.hpp 2009-03-30 08:13:26.974049223 -0700
30 @@ -37,7 +37,7 @@
31 /// Exception specifications for BDB library.
32
33 #include <corelib/ncbiexpt.hpp>
34 -
35 +#include <string.h>
36
37 BEGIN_NCBI_SCOPE
38
39 Only in ncbisrc2/include/bdb: bdb_expt.hpp~
40 diff -ur ncbisrc/include/bdb/bdb_ext_blob.hpp ncbisrc2/include/bdb/bdb_ext_blob.hpp
41 --- ncbisrc/include/bdb/bdb_ext_blob.hpp 2007-10-16 04:53:08.000000000 -0700
42 +++ ncbisrc2/include/bdb/bdb_ext_blob.hpp 2009-03-30 08:12:36.695233255 -0700
43 @@ -48,6 +48,7 @@
44 #include <bdb/bdb_cursor.hpp>
45 #include <bdb/error_codes.hpp>
46
47 +#include <string.h>
48
49 BEGIN_NCBI_SCOPE
50
51 Only in ncbisrc2/include/bdb: bdb_ext_blob.hpp~
52 diff -ur ncbisrc/include/bdb/bdb_result_store.hpp ncbisrc2/include/bdb/bdb_result_store.hpp
53 --- ncbisrc/include/bdb/bdb_result_store.hpp 2007-05-04 10:18:18.000000000 -0700
54 +++ ncbisrc2/include/bdb/bdb_result_store.hpp 2009-03-30 08:12:50.300638761 -0700
55 @@ -41,7 +41,7 @@
56 #include <bdb/bdb_cursor.hpp>
57
58 #include <vector>
59 -
60 +#include <string.h>
61
62 BEGIN_NCBI_SCOPE
63
64 Only in ncbisrc2/include/bdb: bdb_result_store.hpp~
65 diff -ur ncbisrc/include/bdb/bdb_types.hpp ncbisrc2/include/bdb/bdb_types.hpp
66 --- ncbisrc/include/bdb/bdb_types.hpp 2008-07-09 18:14:15.000000000 -0700
67 +++ ncbisrc2/include/bdb/bdb_types.hpp 2009-03-30 08:13:07.060629124 -0700
68 @@ -38,7 +38,7 @@
69 #include <corelib/ncbistr.hpp>
70 #include <util/simple_buffer.hpp>
71
72 -#include <string>
73 +#include <string.h>
74 #include <vector>
75 #include <memory>
76
77 Only in ncbisrc2/include/bdb: bdb_types.hpp~
78 diff -ur ncbisrc/include/cgi/cgi_serial.hpp ncbisrc2/include/cgi/cgi_serial.hpp
79 --- ncbisrc/include/cgi/cgi_serial.hpp 2007-05-04 10:18:18.000000000 -0700
80 +++ ncbisrc2/include/cgi/cgi_serial.hpp 2009-03-30 07:44:03.707613180 -0700
81 @@ -36,7 +36,7 @@
82 #include <corelib/ncbistre.hpp>
83 #include <corelib/ncbistr.hpp>
84 #include <cgi/ncbicgi.hpp>
85 -
86 +#include <string.h>
87 #include <vector>
88
89 BEGIN_NCBI_SCOPE
90 diff -ur ncbisrc/include/cgi/ncbicgi.hpp ncbisrc2/include/cgi/ncbicgi.hpp
91 --- ncbisrc/include/cgi/ncbicgi.hpp 2008-06-26 07:12:00.000000000 -0700
92 +++ ncbisrc2/include/cgi/ncbicgi.hpp 2009-03-30 07:44:15.930939033 -0700
93 @@ -39,7 +39,7 @@
94 #include <corelib/stream_utils.hpp>
95 #include <cgi/cgi_util.hpp>
96 #include <set>
97 -
98 +#include <string.h>
99
100 /** @addtogroup CGIReqRes
101 *
102 diff -ur ncbisrc/include/connect/email_diag_handler.hpp ncbisrc2/include/connect/email_diag_handler.hpp
103 --- ncbisrc/include/connect/email_diag_handler.hpp 2007-05-04 10:18:18.000000000 -0700
104 +++ ncbisrc2/include/connect/email_diag_handler.hpp 2009-03-30 08:04:49.530687285 -0700
105 @@ -35,7 +35,7 @@
106
107 #include <connect/connect_export.h>
108 #include <corelib/ncbistd.hpp>
109 -
110 +#include <string.h>
111
112 /** @addtogroup EmailDiag
113 *
114 Only in ncbisrc2/include/connect: email_diag_handler.hpp~
115 diff -ur ncbisrc/include/connect/ncbi_conn_stream.hpp ncbisrc2/include/connect/ncbi_conn_stream.hpp
116 --- ncbisrc/include/connect/ncbi_conn_stream.hpp 2008-05-24 11:27:38.000000000 -0700
117 +++ ncbisrc2/include/connect/ncbi_conn_stream.hpp 2009-03-30 08:05:29.780683283 -0700
118 @@ -77,6 +77,7 @@
119 #include <connect/ncbi_service_connector.h>
120 #include <connect/ncbi_socket_connector.h>
121 #include <vector>
122 +#include <string.h>
123
124 /** @addtogroup ConnStreams
125 *
126 Only in ncbisrc2/include/connect: ncbi_conn_stream.hpp~
127 diff -ur ncbisrc/include/connect/ncbi_sendmail.h ncbisrc2/include/connect/ncbi_sendmail.h
128 --- ncbisrc/include/connect/ncbi_sendmail.h 2007-05-04 10:18:18.000000000 -0700
129 +++ ncbisrc2/include/connect/ncbi_sendmail.h 2009-03-30 08:05:07.724018325 -0700
130 @@ -34,7 +34,7 @@
131 */
132
133 #include <connect/ncbi_types.h>
134 -
135 +#include <string.h>
136
137 /** @addtogroup Sendmail
138 *
139 Only in ncbisrc2/include/connect: ncbi_sendmail.h~
140 diff -ur ncbisrc/include/connect/ncbi_util.h ncbisrc2/include/connect/ncbi_util.h
141 --- ncbisrc/include/connect/ncbi_util.h 2008-05-14 10:37:01.000000000 -0700
142 +++ ncbisrc2/include/connect/ncbi_util.h 2009-03-30 08:04:32.204046404 -0700
143 @@ -62,7 +62,7 @@
144
145 #include <connect/ncbi_core.h>
146 #include <stdio.h>
147 -
148 +#include <string.h>
149
150 /** @addtogroup UtilityFunc
151 *
152 Only in ncbisrc2/include/connect: ncbi_util.h~
153 diff -ur ncbisrc/include/corelib/ddumpable.hpp ncbisrc2/include/corelib/ddumpable.hpp
154 --- ncbisrc/include/corelib/ddumpable.hpp 2007-05-04 10:18:18.000000000 -0700
155 +++ ncbisrc2/include/corelib/ddumpable.hpp 2009-03-30 07:46:59.790783745 -0700
156 @@ -34,6 +34,7 @@
157 */
158
159 #include <corelib/ncbistd.hpp>
160 +#include <string.h>
161
162 BEGIN_NCBI_SCOPE
163
164 Only in ncbisrc2/include/corelib: ddumpable.hpp~
165 diff -ur ncbisrc/include/corelib/hash_impl/stlp_defs.hpp ncbisrc2/include/corelib/hash_impl/stlp_defs.hpp
166 --- ncbisrc/include/corelib/hash_impl/stlp_defs.hpp 2007-05-04 10:18:18.000000000 -0700
167 +++ ncbisrc2/include/corelib/hash_impl/stlp_defs.hpp 2009-03-30 07:46:42.720785218 -0700
168 @@ -69,6 +69,7 @@
169 #ifndef STLP_DEFS__HPP
170 #define STLP_DEFS__HPP
171
172 +#include <string.h>
173 #include <corelib/ncbistl.hpp>
174
175 // Use STL types
176 Only in ncbisrc2/include/corelib/hash_impl: stlp_defs.hpp~
177 diff -ur ncbisrc/include/corelib/impl/ncbi_param_impl.hpp ncbisrc2/include/corelib/impl/ncbi_param_impl.hpp
178 --- ncbisrc/include/corelib/impl/ncbi_param_impl.hpp 2007-12-12 08:36:27.000000000 -0800
179 +++ ncbisrc2/include/corelib/impl/ncbi_param_impl.hpp 2009-03-30 07:47:15.094208305 -0700
180 @@ -36,7 +36,7 @@
181
182 #include <corelib/ncbistr.hpp>
183 #include <corelib/ncbistre.hpp>
184 -
185 +#include <string.h>
186
187 BEGIN_NCBI_SCOPE
188
189 Only in ncbisrc2/include/corelib/impl: ncbi_param_impl.hpp~
190 diff -ur ncbisrc/include/corelib/ncbi_os_mac.hpp ncbisrc2/include/corelib/ncbi_os_mac.hpp
191 --- ncbisrc/include/corelib/ncbi_os_mac.hpp 2007-05-04 10:18:18.000000000 -0700
192 +++ ncbisrc2/include/corelib/ncbi_os_mac.hpp 2009-03-30 07:45:45.955375886 -0700
193 @@ -36,6 +36,7 @@
194 #include <corelib/ncbistd.hpp>
195 #include <corelib/ncbistl.hpp>
196 #include <corelib/ncbistr.hpp>
197 +#include <string.h>
198
199 #if !defined(NCBI_OS_MAC)
200 # error "ncbi_os_mac.hpp must be used on MAC platforms only"
201 diff -ur ncbisrc/include/corelib/ncbiexec.hpp ncbisrc2/include/corelib/ncbiexec.hpp
202 --- ncbisrc/include/corelib/ncbiexec.hpp 2008-02-29 06:09:40.000000000 -0800
203 +++ ncbisrc2/include/corelib/ncbiexec.hpp 2009-03-30 07:47:40.511196238 -0700
204 @@ -36,7 +36,7 @@
205
206
207 #include <corelib/ncbi_process.hpp>
208 -
209 +#include <string.h>
210
211 /** @addtogroup Exec
212 *
213 Only in ncbisrc2/include/corelib: ncbiexec.hpp~
214 diff -ur ncbisrc/include/corelib/ncbiexpt.hpp ncbisrc2/include/corelib/ncbiexpt.hpp
215 --- ncbisrc/include/corelib/ncbiexpt.hpp 2008-01-15 16:52:57.000000000 -0800
216 +++ ncbisrc2/include/corelib/ncbiexpt.hpp 2009-03-30 07:44:43.521599947 -0700
217 @@ -43,6 +43,7 @@
218 #include <corelib/ncbi_stack.hpp>
219 #include <errno.h>
220 #include <typeinfo>
221 +#include <string.h>
222
223 #ifdef NCBI_OS_MSWIN
224 # include <corelib/ncbi_os_mswin.hpp>
225 Only in ncbisrc2/include/corelib: ncbiexpt.hpp~
226 diff -ur ncbisrc/include/corelib/ncbistr.hpp ncbisrc2/include/corelib/ncbistr.hpp
227 --- ncbisrc/include/corelib/ncbistr.hpp 2008-09-15 14:38:55.000000000 -0700
228 +++ ncbisrc2/include/corelib/ncbistr.hpp 2009-03-30 07:45:11.067462214 -0700
229 @@ -42,7 +42,7 @@
230 #include <time.h>
231 #include <stdarg.h>
232 #include <vector>
233 -
234 +#include <string.h>
235
236
237 BEGIN_NCBI_SCOPE
238 diff -ur ncbisrc/include/corelib/ncbistre.hpp ncbisrc2/include/corelib/ncbistre.hpp
239 --- ncbisrc/include/corelib/ncbistre.hpp 2007-12-05 10:59:41.000000000 -0800
240 +++ ncbisrc2/include/corelib/ncbistre.hpp 2009-03-30 07:46:05.912058329 -0700
241 @@ -38,7 +38,7 @@
242
243 #include <corelib/ncbistl.hpp>
244 #include <corelib/ncbitype.h>
245 -
246 +#include <string.h>
247
248 /// Determine which iostream library to use, include appropriate
249 /// headers, and #define specific preprocessor variables.
250 Only in ncbisrc2/include/corelib: ncbistre.hpp~
251 diff -ur ncbisrc/include/corelib/tempstr.hpp ncbisrc2/include/corelib/tempstr.hpp
252 --- ncbisrc/include/corelib/tempstr.hpp 2008-07-02 13:22:02.000000000 -0700
253 +++ ncbisrc2/include/corelib/tempstr.hpp 2009-03-30 07:46:20.820822657 -0700
254 @@ -40,7 +40,7 @@
255 #include <corelib/ncbimisc.hpp>
256 #include <corelib/ncbidbg.hpp>
257 #include <algorithm>
258 -
259 +#include <string.h>
260
261 BEGIN_NCBI_SCOPE
262
263 Only in ncbisrc2/include/corelib: tempstr.hpp~
264 diff -ur ncbisrc/include/dbapi/driver/ftds63/freetds/cspublic.h ncbisrc2/include/dbapi/driver/ftds63/freetds/cspublic.h
265 --- ncbisrc/include/dbapi/driver/ftds63/freetds/cspublic.h 2007-05-04 10:18:18.000000000 -0700
266 +++ ncbisrc2/include/dbapi/driver/ftds63/freetds/cspublic.h 2009-03-30 07:59:55.970716018 -0700
267 @@ -21,6 +21,7 @@
268 #define _cspublic_h_
269
270 #include "tds_sysdep_public.h"
271 +#include <string.h>
272
273 #ifdef __cplusplus
274 extern "C"
275 Only in ncbisrc2/include/dbapi/driver/ftds63/freetds: cspublic.h~
276 diff -ur ncbisrc/include/dbapi/driver/ftds63/freetds/replacements.h ncbisrc2/include/dbapi/driver/ftds63/freetds/replacements.h
277 --- ncbisrc/include/dbapi/driver/ftds63/freetds/replacements.h 2007-05-04 10:18:18.000000000 -0700
278 +++ ncbisrc2/include/dbapi/driver/ftds63/freetds/replacements.h 2009-03-30 07:59:34.634050584 -0700
279 @@ -20,6 +20,8 @@
280 #ifndef _replacements_h_
281 #define _replacements_h_
282
283 +#include <string.h>
284 +
285 #ifdef __cplusplus
286 extern "C"
287 {
288 Only in ncbisrc2/include/dbapi/driver/ftds63/freetds: replacements.h~
289 diff -ur ncbisrc/include/dbapi/driver/ftds63/freetds/sybdb.h ncbisrc2/include/dbapi/driver/ftds63/freetds/sybdb.h
290 --- ncbisrc/include/dbapi/driver/ftds63/freetds/sybdb.h 2007-05-04 10:18:18.000000000 -0700
291 +++ ncbisrc2/include/dbapi/driver/ftds63/freetds/sybdb.h 2009-03-30 07:59:19.794053204 -0700
292 @@ -20,6 +20,8 @@
293 #ifndef _sybdb_h_
294 #define _sybdb_h_
295
296 +#include <string.h>
297 +
298 #ifndef NCBI_FTDS_RENAME_SYBDB
299 # define NCBI_FTDS_RENAME_SYBDB
300 #endif
301 Only in ncbisrc2/include/dbapi/driver/ftds63/freetds: sybdb.h~
302 diff -ur ncbisrc/include/dbapi/driver/ftds63/freetds/tdsstring.h ncbisrc2/include/dbapi/driver/ftds63/freetds/tdsstring.h
303 --- ncbisrc/include/dbapi/driver/ftds63/freetds/tdsstring.h 2007-05-04 10:18:18.000000000 -0700
304 +++ ncbisrc2/include/dbapi/driver/ftds63/freetds/tdsstring.h 2009-03-30 07:59:05.087387677 -0700
305 @@ -20,6 +20,8 @@
306 #ifndef _tdsstring_h_
307 #define _tdsstring_h_
308
309 +#include <string.h>
310 +
311 static const char rcsid_tdsstring_h[] = "$Id: tdsstring.h 103491 2007-05-04 17:18:18Z kazimird $";
312 static const void *const no_unused_tdsstring_h_warn[] = { rcsid_tdsstring_h, no_unused_tdsstring_h_warn };
313
314 Only in ncbisrc2/include/dbapi/driver/ftds63/freetds: tdsstring.h~
315 diff -ur ncbisrc/include/dbapi/driver/ftds64/freetds/cspublic.h ncbisrc2/include/dbapi/driver/ftds64/freetds/cspublic.h
316 --- ncbisrc/include/dbapi/driver/ftds64/freetds/cspublic.h 2008-04-03 05:33:27.000000000 -0700
317 +++ ncbisrc2/include/dbapi/driver/ftds64/freetds/cspublic.h 2009-03-30 08:01:23.644494415 -0700
318 @@ -21,6 +21,7 @@
319 #define _cspublic_h_
320
321 #include <cstypes.h>
322 +#include <string.h>
323
324 #ifndef NCBI_DBAPI_RENAME_CTLIB
325 # define NCBI_DBAPI_RENAME_CTLIB
326 Only in ncbisrc2/include/dbapi/driver/ftds64/freetds: cspublic.h~
327 diff -ur ncbisrc/include/dbapi/driver/ftds64/freetds/replacements.h ncbisrc2/include/dbapi/driver/ftds64/freetds/replacements.h
328 --- ncbisrc/include/dbapi/driver/ftds64/freetds/replacements.h 2007-05-04 10:18:18.000000000 -0700
329 +++ ncbisrc2/include/dbapi/driver/ftds64/freetds/replacements.h 2009-03-30 08:01:10.664041173 -0700
330 @@ -20,6 +20,8 @@
331 #ifndef _replacements_h_
332 #define _replacements_h_
333
334 +#include <string.h>
335 +
336 #ifdef __cplusplus
337 extern "C"
338 {
339 Only in ncbisrc2/include/dbapi/driver/ftds64/freetds: replacements.h~
340 diff -ur ncbisrc/include/dbapi/driver/ftds64/freetds/sybdb.h ncbisrc2/include/dbapi/driver/ftds64/freetds/sybdb.h
341 --- ncbisrc/include/dbapi/driver/ftds64/freetds/sybdb.h 2008-08-14 08:20:28.000000000 -0700
342 +++ ncbisrc2/include/dbapi/driver/ftds64/freetds/sybdb.h 2009-03-30 08:00:58.970709718 -0700
343 @@ -27,6 +27,8 @@
344 #ifndef _sybdb_h_
345 #define _sybdb_h_
346
347 +#include <string.h>
348 +
349 #ifndef NCBI_FTDS_RENAME_SYBDB
350 # define NCBI_FTDS_RENAME_SYBDB
351 #endif
352 Only in ncbisrc2/include/dbapi/driver/ftds64/freetds: sybdb.h~
353 diff -ur ncbisrc/include/dbapi/driver/ftds64/freetds/tdsstring.h ncbisrc2/include/dbapi/driver/ftds64/freetds/tdsstring.h
354 --- ncbisrc/include/dbapi/driver/ftds64/freetds/tdsstring.h 2007-05-04 10:18:18.000000000 -0700
355 +++ ncbisrc2/include/dbapi/driver/ftds64/freetds/tdsstring.h 2009-03-30 08:00:39.994242251 -0700
356 @@ -22,6 +22,8 @@
357
358 /* $Id: tdsstring.h 103491 2007-05-04 17:18:18Z kazimird $ */
359
360 +#include <string.h>
361 +
362 extern const struct DSTR_STRUCT tds_str_empty;
363
364 /* TODO do some function and use inline if available */
365 Only in ncbisrc2/include/dbapi/driver/ftds64/freetds: tdsstring.h~
366 diff -ur ncbisrc/include/dbapi/driver/ftds8/freetds/sybdb.h ncbisrc2/include/dbapi/driver/ftds8/freetds/sybdb.h
367 --- ncbisrc/include/dbapi/driver/ftds8/freetds/sybdb.h 2008-08-14 08:20:28.000000000 -0700
368 +++ ncbisrc2/include/dbapi/driver/ftds8/freetds/sybdb.h 2009-03-30 08:02:00.814037112 -0700
369 @@ -20,6 +20,8 @@
370 #ifndef _sybdb_h_
371 #define _sybdb_h_
372
373 +#include <string.h>
374 +
375 #ifndef NCBI_FTDS_RENAME_SYBDB
376 # define NCBI_FTDS_RENAME_SYBDB
377 #endif
378 Only in ncbisrc2/include/dbapi/driver/ftds8/freetds: sybdb.h~
379 diff -ur ncbisrc/include/dbapi/driver/ftds8/freetds/tds.h ncbisrc2/include/dbapi/driver/ftds8/freetds/tds.h
380 --- ncbisrc/include/dbapi/driver/ftds8/freetds/tds.h 2007-12-21 10:02:52.000000000 -0800
381 +++ ncbisrc2/include/dbapi/driver/ftds8/freetds/tds.h 2009-03-30 08:01:49.344038125 -0700
382 @@ -20,6 +20,8 @@
383 #ifndef _tds_h_
384 #define _tds_h_
385
386 +#include <string.h>
387 +
388 static char rcsid_tds_h[]=
389 "$Id: tds.h 115998 2007-12-21 18:02:52Z ivanovp $";
390 static void *no_unused_tds_h_warn[]={rcsid_tds_h, no_unused_tds_h_warn};
391 Only in ncbisrc2/include/dbapi/driver/ftds8/freetds: tds.h~
392 diff -ur ncbisrc/include/dbapi/driver/types.hpp ncbisrc2/include/dbapi/driver/types.hpp
393 --- ncbisrc/include/dbapi/driver/types.hpp 2008-04-28 08:26:25.000000000 -0700
394 +++ ncbisrc2/include/dbapi/driver/types.hpp 2009-03-30 08:02:18.457600888 -0700
395 @@ -1,6 +1,8 @@
396 #ifndef DBAPI_DRIVER___TYPES__HPP
397 #define DBAPI_DRIVER___TYPES__HPP
398
399 +#include <string.h>
400 +
401 /* $Id: types.hpp 125882 2008-04-28 15:26:25Z ivanovp $
402 * ===========================================================================
403 *
404 Only in ncbisrc2/include/dbapi/driver: types.hpp~
405 diff -ur ncbisrc/include/html/page.hpp ncbisrc2/include/html/page.hpp
406 --- ncbisrc/include/html/page.hpp 2008-06-02 07:14:52.000000000 -0700
407 +++ ncbisrc2/include/html/page.hpp 2009-03-30 08:08:00.343990399 -0700
408 @@ -43,7 +43,7 @@
409 #include <html/html.hpp>
410 #include <html/nodemap.hpp>
411 #include <html/jsmenu.hpp>
412 -
413 +#include <string.h>
414
415 /** @addtogroup HTMLcomp
416 *
417 Only in ncbisrc2/include/html: page.hpp~
418 diff -ur ncbisrc/include/objects/seqalign/Dense_seg.hpp ncbisrc2/include/objects/seqalign/Dense_seg.hpp
419 --- ncbisrc/include/objects/seqalign/Dense_seg.hpp 2007-05-04 10:18:18.000000000 -0700
420 +++ ncbisrc2/include/objects/seqalign/Dense_seg.hpp 2009-03-30 08:08:25.347321273 -0700
421 @@ -40,7 +40,7 @@
422
423 // generated includes
424 #include <objects/seqalign/Dense_seg_.hpp>
425 -
426 +#include <string.h>
427 #include <objects/seqalign/seqalign_exception.hpp>
428 #include <util/range.hpp>
429
430 Only in ncbisrc2/include/objects/seqalign: Dense_seg.hpp~
431 diff -ur ncbisrc/include/objmgr/split/asn_sizer.hpp ncbisrc2/include/objmgr/split/asn_sizer.hpp
432 --- ncbisrc/include/objmgr/split/asn_sizer.hpp 2007-05-04 10:18:18.000000000 -0700
433 +++ ncbisrc2/include/objmgr/split/asn_sizer.hpp 2009-03-30 08:04:04.928226974 -0700
434 @@ -37,7 +37,7 @@
435
436 #include <corelib/ncbistd.hpp>
437 #include <corelib/ncbiobj.hpp>
438 -
439 +#include <string.h>
440 #include <serial/serial.hpp>
441 #include <serial/objostr.hpp>
442
443 Only in ncbisrc2/include/objmgr/split: asn_sizer.hpp~
444 diff -ur ncbisrc/include/objtools/data_loaders/genbank/reader_id2_base.hpp ncbisrc2/include/objtools/data_loaders/genbank/reader_id2_base.hpp
445 --- ncbisrc/include/objtools/data_loaders/genbank/reader_id2_base.hpp 2008-05-21 09:24:51.000000000 -0700
446 +++ ncbisrc2/include/objtools/data_loaders/genbank/reader_id2_base.hpp 2009-03-30 07:43:36.932053563 -0700
447 @@ -32,6 +32,7 @@
448
449 #include <objtools/data_loaders/genbank/reader.hpp>
450 #include <corelib/ncbitime.hpp>
451 +#include <string.h>
452
453 BEGIN_NCBI_SCOPE
454
455 diff -ur ncbisrc/include/objtools/format/gbseq_formatter.hpp ncbisrc2/include/objtools/format/gbseq_formatter.hpp
456 --- ncbisrc/include/objtools/format/gbseq_formatter.hpp 2007-05-04 10:18:18.000000000 -0700
457 +++ ncbisrc2/include/objtools/format/gbseq_formatter.hpp 2009-03-30 07:42:59.660807736 -0700
458 @@ -36,7 +36,7 @@
459 #include <serial/objectio.hpp>
460 #include <objects/gbseq/GBSeq.hpp>
461 #include <objtools/format/item_formatter.hpp>
462 -
463 +#include <string.h>
464
465 BEGIN_NCBI_SCOPE
466 BEGIN_SCOPE(objects)
467 diff -ur ncbisrc/include/objtools/format/item_formatter.hpp ncbisrc2/include/objtools/format/item_formatter.hpp
468 --- ncbisrc/include/objtools/format/item_formatter.hpp 2007-05-04 10:18:18.000000000 -0700
469 +++ ncbisrc2/include/objtools/format/item_formatter.hpp 2009-03-30 07:43:15.697473020 -0700
470 @@ -35,7 +35,7 @@
471 */
472 #include <corelib/ncbistd.hpp>
473 #include <corelib/ncbiobj.hpp>
474 -
475 +#include <string.h>
476 #include <objtools/format/formatter.hpp>
477 #include <objtools/format/context.hpp>
478
479 Only in ncbisrc2/include/objtools/format: item_formatter.hpp~
480 diff -ur ncbisrc/include/objtools/format/items/flat_seqloc.hpp ncbisrc2/include/objtools/format/items/flat_seqloc.hpp
481 --- ncbisrc/include/objtools/format/items/flat_seqloc.hpp 2007-05-04 10:18:18.000000000 -0700
482 +++ ncbisrc2/include/objtools/format/items/flat_seqloc.hpp 2009-03-30 07:42:21.774188024 -0700
483 @@ -36,6 +36,7 @@
484 #include <corelib/ncbiobj.hpp>
485 #include <util/range.hpp>
486 #include <objects/seqloc/Seq_loc.hpp>
487 +#include <string.h>
488
489 BEGIN_NCBI_SCOPE
490 BEGIN_SCOPE(objects)
491 diff -ur ncbisrc/include/serial/impl/objistrxml.inl ncbisrc2/include/serial/impl/objistrxml.inl
492 --- ncbisrc/include/serial/impl/objistrxml.inl 2008-03-11 07:53:45.000000000 -0700
493 +++ ncbisrc2/include/serial/impl/objistrxml.inl 2009-03-30 08:07:40.277335608 -0700
494 @@ -32,6 +32,8 @@
495 * !!! PUT YOUR DESCRIPTION HERE !!!
496 */
497
498 +#include <string.h>
499 +
500 inline
501 bool CObjectIStreamXml::InsideTag(void) const
502 {
503 Only in ncbisrc2/include/serial/impl: objistrxml.inl~
504 diff -ur ncbisrc/include/serial/pack_string.hpp ncbisrc2/include/serial/pack_string.hpp
505 --- ncbisrc/include/serial/pack_string.hpp 2008-06-09 12:19:52.000000000 -0700
506 +++ ncbisrc2/include/serial/pack_string.hpp 2009-03-30 08:07:09.801330926 -0700
507 @@ -33,8 +33,7 @@
508 #include <serial/objhook.hpp>
509 #include <serial/impl/objecttype.hpp>
510 #include <serial/objistr.hpp>
511 -
512 -#include <string>
513 +#include <string.h>
514 #include <set>
515
516 BEGIN_NCBI_SCOPE
517 Only in ncbisrc2/include/serial: pack_string.hpp~
518 diff -ur ncbisrc/include/util/bitset/bmblocks.h ncbisrc2/include/util/bitset/bmblocks.h
519 --- ncbisrc/include/util/bitset/bmblocks.h 2007-05-04 10:18:18.000000000 -0700
520 +++ ncbisrc2/include/util/bitset/bmblocks.h 2009-03-30 08:10:50.543973375 -0700
521 @@ -29,6 +29,7 @@
522 #define BM_BLOCKS__H__INCLUDED__
523
524 #include "bmfwd.h"
525 +#include <string.h>
526
527 namespace bm
528 {
529 Only in ncbisrc2/include/util/bitset: bmblocks.h~
530 diff -ur ncbisrc/include/util/bitset/bmfunc.h ncbisrc2/include/util/bitset/bmfunc.h
531 --- ncbisrc/include/util/bitset/bmfunc.h 2007-05-04 10:18:18.000000000 -0700
532 +++ ncbisrc2/include/util/bitset/bmfunc.h 2009-03-30 08:10:35.530652546 -0700
533 @@ -28,7 +28,7 @@
534 #define BMFUNC__H__INCLUDED__
535
536 #include <memory.h>
537 -
538 +#include <string.h>
539
540 #ifdef _MSC_VER
541 # pragma warning( disable: 4146 )
542 Only in ncbisrc2/include/util/bitset: bmfunc.h~
543 diff -ur ncbisrc/include/util/bitset/bmserial.h ncbisrc2/include/util/bitset/bmserial.h
544 --- ncbisrc/include/util/bitset/bmserial.h 2008-05-29 05:50:41.000000000 -0700
545 +++ ncbisrc2/include/util/bitset/bmserial.h 2009-03-30 08:09:54.043989563 -0700
546 @@ -26,7 +26,7 @@
547
548 #ifndef BMSERIAL__H__INCLUDED__
549 #define BMSERIAL__H__INCLUDED__
550 -
551 +#include <string.h>
552 /*! \defgroup bvserial bvector serialization
553 * bvector serialization
554 * \ingroup bmagic
555 Only in ncbisrc2/include/util/bitset: bmserial.h~
556 diff -ur ncbisrc/include/util/bitset/bmsse2.h ncbisrc2/include/util/bitset/bmsse2.h
557 --- ncbisrc/include/util/bitset/bmsse2.h 2007-05-04 10:18:18.000000000 -0700
558 +++ ncbisrc2/include/util/bitset/bmsse2.h 2009-03-30 08:09:39.664000995 -0700
559 @@ -27,7 +27,7 @@
560
561 #ifndef BMSSE2__H__INCLUDED__
562 #define BMSSE2__H__INCLUDED__
563 -
564 +#include <string.h>
565
566 // Header implements processor specific intrinsics declarations for SSE2
567 // instruction set
568 Only in ncbisrc2/include/util/bitset: bmsse2.h~
569 diff -ur ncbisrc/include/util/bitset/bmvmin.h ncbisrc2/include/util/bitset/bmvmin.h
570 --- ncbisrc/include/util/bitset/bmvmin.h 2007-05-04 10:18:18.000000000 -0700
571 +++ ncbisrc2/include/util/bitset/bmvmin.h 2009-03-30 08:10:19.563986488 -0700
572 @@ -27,6 +27,8 @@
573 #ifndef BMVMIN__H__INCLUDED__
574 #define BMVMIN__H__INCLUDED__
575
576 +#include <string.h>
577 +
578 namespace bm
579 {
580
581 Only in ncbisrc2/include/util/bitset: bmvmin.h~
582 diff -ur ncbisrc/include/util/cache/cache_ref.hpp ncbisrc2/include/util/cache/cache_ref.hpp
583 --- ncbisrc/include/util/cache/cache_ref.hpp 2007-05-04 10:18:18.000000000 -0700
584 +++ ncbisrc2/include/util/cache/cache_ref.hpp 2009-03-30 08:09:16.787371994 -0700
585 @@ -36,6 +36,7 @@
586 /// cache (ICache) external reference using hash key(CRC32, MD5)
587 ///
588
589 +#include <string.h>
590 #include <util/cache/icache.hpp>
591
592 BEGIN_NCBI_SCOPE
593 Only in ncbisrc2/include/util/cache: cache_ref.hpp~
594 diff -ur ncbisrc/include/util/compress/tar.hpp ncbisrc2/include/util/compress/tar.hpp
595 --- ncbisrc/include/util/compress/tar.hpp 2008-06-27 12:59:40.000000000 -0700
596 +++ ncbisrc2/include/util/compress/tar.hpp 2009-03-30 08:08:41.787320075 -0700
597 @@ -51,7 +51,7 @@
598 #include <corelib/ncbifile.hpp>
599 #include <list>
600 #include <utility>
601 -
602 +#include <string.h>
603
604 /** @addtogroup Compression
605 *
606 Only in ncbisrc2/include/util/compress: tar.hpp~
607 diff -ur ncbisrc/include/util/compress/zlib/zutil.h ncbisrc2/include/util/compress/zlib/zutil.h
608 --- ncbisrc/include/util/compress/zlib/zutil.h 2007-05-04 10:18:18.000000000 -0700
609 +++ ncbisrc2/include/util/compress/zlib/zutil.h 2009-03-30 08:08:59.157327513 -0700
610 @@ -13,6 +13,8 @@
611 #ifndef ZUTIL_H
612 #define ZUTIL_H
613
614 +#include <string.h>
615 +
616 #define ZLIB_INTERNAL
617 #include "zlib.h"
618
619 Only in ncbisrc2/include/util/compress/zlib: zutil.h~
620 diff -ur ncbisrc/include/util/math/matrix.hpp ncbisrc2/include/util/math/matrix.hpp
621 --- ncbisrc/include/util/math/matrix.hpp 2007-05-04 10:18:18.000000000 -0700
622 +++ ncbisrc2/include/util/math/matrix.hpp 2009-03-30 08:11:19.114441264 -0700
623 @@ -35,7 +35,7 @@
624 #include <corelib/ncbistd.hpp>
625 #include <util/math/promote.hpp>
626 #include <vector>
627 -
628 +#include <string.h>
629
630 BEGIN_NCBI_SCOPE
631
632 Only in ncbisrc2/include/util/math: matrix.hpp~
633 diff -ur ncbisrc/include/util/simple_buffer.hpp ncbisrc2/include/util/simple_buffer.hpp
634 --- ncbisrc/include/util/simple_buffer.hpp 2008-05-21 07:18:11.000000000 -0700
635 +++ ncbisrc2/include/util/simple_buffer.hpp 2009-03-30 08:12:10.030641726 -0700
636 @@ -33,6 +33,7 @@
637 */
638
639 #include <corelib/ncbistd.hpp>
640 +#include <string.h>
641
642 BEGIN_NCBI_SCOPE
643
644 Only in ncbisrc2/include/util: simple_buffer.hpp~
645 diff -ur ncbisrc/include/util/strbuffer.inl ncbisrc2/include/util/strbuffer.inl
646 --- ncbisrc/include/util/strbuffer.inl 2007-05-04 10:18:18.000000000 -0700
647 +++ ncbisrc2/include/util/strbuffer.inl 2009-03-30 08:11:39.863978450 -0700
648 @@ -31,6 +31,7 @@
649 * File Description:
650 * !!! PUT YOUR DESCRIPTION HERE !!!
651 */
652 +#include <string.h>
653
654 inline
655 bool CIStreamBuffer::fail(void) const
656 Only in ncbisrc2/include/util: strbuffer.inl~
657 diff -ur ncbisrc/include/util/tables/raw_scoremat.h ncbisrc2/include/util/tables/raw_scoremat.h
658 --- ncbisrc/include/util/tables/raw_scoremat.h 2008-08-22 07:44:37.000000000 -0700
659 +++ ncbisrc2/include/util/tables/raw_scoremat.h 2009-03-30 08:11:55.017900034 -0700
660 @@ -35,6 +35,7 @@
661 **/
662
663 #include <util/tables/tables_export.h>
664 +#include <string.h>
665
666 #ifdef __cplusplus
667 extern "C" {
668 Only in ncbisrc2/include/util/tables: raw_scoremat.h~
669 diff -ur ncbisrc/src/algo/align/contig_assembly/demo/demo_contig_assembly.cpp ncbisrc2/src/algo/align/contig_assembly/demo/demo_contig_assembly.cpp
670 --- ncbisrc/src/algo/align/contig_assembly/demo/demo_contig_assembly.cpp 2007-05-04 10:18:18.000000000 -0700
671 +++ ncbisrc2/src/algo/align/contig_assembly/demo/demo_contig_assembly.cpp 2009-03-30 09:17:24.091552327 -0700
672 @@ -1,3 +1,4 @@
673 +#include <string.h>
674 /* $Id: demo_contig_assembly.cpp 103491 2007-05-04 17:18:18Z kazimird $
675 * ===========================================================================
676 *
677 diff -ur ncbisrc/src/algo/align/nw/nw_aligner.cpp ncbisrc2/src/algo/align/nw/nw_aligner.cpp
678 --- ncbisrc/src/algo/align/nw/nw_aligner.cpp 2008-04-15 11:30:36.000000000 -0700
679 +++ ncbisrc2/src/algo/align/nw/nw_aligner.cpp 2009-03-30 09:17:24.101542161 -0700
680 @@ -1,3 +1,4 @@
681 +#include <string.h>
682 /* $Id: nw_aligner.cpp 124580 2008-04-15 18:30:36Z kapustin $
683 * ===========================================================================
684 *
685 diff -ur ncbisrc/src/algo/align/nw/nw_formatter.cpp ncbisrc2/src/algo/align/nw/nw_formatter.cpp
686 --- ncbisrc/src/algo/align/nw/nw_formatter.cpp 2008-08-26 12:14:06.000000000 -0700
687 +++ ncbisrc2/src/algo/align/nw/nw_formatter.cpp 2009-03-30 09:17:24.108198633 -0700
688 @@ -1,3 +1,4 @@
689 +#include <string.h>
690 /* $Id: nw_formatter.cpp 138540 2008-08-26 19:14:06Z kapustin $
691 * ===========================================================================
692 *
693 diff -ur ncbisrc/src/algo/align/nw/nw_spliced_aligner32.cpp ncbisrc2/src/algo/align/nw/nw_spliced_aligner32.cpp
694 --- ncbisrc/src/algo/align/nw/nw_spliced_aligner32.cpp 2007-06-05 13:49:45.000000000 -0700
695 +++ ncbisrc2/src/algo/align/nw/nw_spliced_aligner32.cpp 2009-03-30 09:17:24.111511750 -0700
696 @@ -1,3 +1,4 @@
697 +#include <string.h>
698 /* $Id: nw_spliced_aligner32.cpp 105172 2007-06-05 20:49:45Z kapustin $
699 * ===========================================================================
700 *
701 diff -ur ncbisrc/src/algo/align/splign/splign.cpp ncbisrc2/src/algo/align/splign/splign.cpp
702 --- ncbisrc/src/algo/align/splign/splign.cpp 2008-11-07 10:00:39.000000000 -0800
703 +++ ncbisrc2/src/algo/align/splign/splign.cpp 2009-03-30 09:17:24.121562271 -0700
704 @@ -1,3 +1,4 @@
705 +#include <string.h>
706 /* $Id: splign.cpp 145192 2008-11-07 18:00:39Z chetvern $
707 * ===========================================================================
708 *
709 diff -ur ncbisrc/src/algo/align/splign/splign_formatter.cpp ncbisrc2/src/algo/align/splign/splign_formatter.cpp
710 --- ncbisrc/src/algo/align/splign/splign_formatter.cpp 2008-11-07 10:00:39.000000000 -0800
711 +++ ncbisrc2/src/algo/align/splign/splign_formatter.cpp 2009-03-30 09:17:24.114864474 -0700
712 @@ -1,3 +1,4 @@
713 +#include <string.h>
714 /* $Id: splign_formatter.cpp 145192 2008-11-07 18:00:39Z chetvern $
715 * ===========================================================================
716 *
717 diff -ur ncbisrc/src/algo/align/util/blast_tabular.cpp ncbisrc2/src/algo/align/util/blast_tabular.cpp
718 --- ncbisrc/src/algo/align/util/blast_tabular.cpp 2008-09-08 09:10:11.000000000 -0700
719 +++ ncbisrc2/src/algo/align/util/blast_tabular.cpp 2009-03-30 09:17:24.098219074 -0700
720 @@ -1,3 +1,4 @@
721 +#include <string.h>
722 /* $Id: blast_tabular.cpp 139702 2008-09-08 16:10:11Z kapustin $
723 * ===========================================================================
724 *
725 diff -ur ncbisrc/src/algo/align/util/demo/compart/em.cpp ncbisrc2/src/algo/align/util/demo/compart/em.cpp
726 --- ncbisrc/src/algo/align/util/demo/compart/em.cpp 2008-09-22 11:25:56.000000000 -0700
727 +++ ncbisrc2/src/algo/align/util/demo/compart/em.cpp 2009-03-30 09:17:24.094953786 -0700
728 @@ -1,3 +1,4 @@
729 +#include <string.h>
730 /* $Id: em.cpp 140909 2008-09-22 18:25:56Z ucko $
731 * ===========================================================================
732 *
733 diff -ur ncbisrc/src/algo/blast/api/blast_memento_priv.hpp ncbisrc2/src/algo/blast/api/blast_memento_priv.hpp
734 --- ncbisrc/src/algo/blast/api/blast_memento_priv.hpp 2007-11-08 14:38:18.000000000 -0800
735 +++ ncbisrc2/src/algo/blast/api/blast_memento_priv.hpp 2009-03-30 09:21:04.873562802 -0700
736 @@ -34,6 +34,7 @@
737 #ifndef ALGO_BLAST_API__BLAST_MEMENTO_PRIV__HPP
738 #define ALGO_BLAST_API__BLAST_MEMENTO_PRIV__HPP
739
740 +#include <string.h>
741 #include <algo/blast/core/blast_gapalign.h>
742 #include <algo/blast/api/blast_aux.hpp>
743 #include "blast_options_local_priv.hpp"
744 Only in ncbisrc2/src/algo/blast/api: blast_memento_priv.hpp~
745 diff -ur ncbisrc/src/algo/blast/api/blast_options_cxx.cpp ncbisrc2/src/algo/blast/api/blast_options_cxx.cpp
746 --- ncbisrc/src/algo/blast/api/blast_options_cxx.cpp 2008-07-17 10:42:49.000000000 -0700
747 +++ ncbisrc2/src/algo/blast/api/blast_options_cxx.cpp 2009-03-30 09:17:23.924884826 -0700
748 @@ -1,3 +1,4 @@
749 +#include <string.h>
750 #ifndef SKIP_DOXYGEN_PROCESSING
751 static char const rcsid[] =
752 "$Id: blast_options_cxx.cpp 134303 2008-07-17 17:42:49Z camacho $";
753 diff -ur ncbisrc/src/algo/blast/api/blast_options_local_priv.cpp ncbisrc2/src/algo/blast/api/blast_options_local_priv.cpp
754 --- ncbisrc/src/algo/blast/api/blast_options_local_priv.cpp 2008-02-14 07:33:39.000000000 -0800
755 +++ ncbisrc2/src/algo/blast/api/blast_options_local_priv.cpp 2009-03-30 09:17:23.968177373 -0700
756 @@ -1,3 +1,4 @@
757 +#include <string.h>
758 #ifndef SKIP_DOXYGEN_PROCESSING
759 static char const rcsid[] =
760 "$Id: blast_options_local_priv.cpp 119800 2008-02-14 15:33:39Z camacho $";
761 diff -ur ncbisrc/src/algo/blast/api/blast_setup_cxx.cpp ncbisrc2/src/algo/blast/api/blast_setup_cxx.cpp
762 --- ncbisrc/src/algo/blast/api/blast_setup_cxx.cpp 2008-09-23 13:01:27.000000000 -0700
763 +++ ncbisrc2/src/algo/blast/api/blast_setup_cxx.cpp 2009-03-30 09:17:23.941490666 -0700
764 @@ -1,3 +1,4 @@
765 +#include <string.h>
766 #ifndef SKIP_DOXYGEN_PROCESSING
767 static char const rcsid[] =
768 "$Id: blast_setup_cxx.cpp 141090 2008-09-23 20:01:27Z gouriano $";
769 diff -ur ncbisrc/src/algo/blast/api/dust_filter.cpp ncbisrc2/src/algo/blast/api/dust_filter.cpp
770 --- ncbisrc/src/algo/blast/api/dust_filter.cpp 2007-05-04 10:18:18.000000000 -0700
771 +++ ncbisrc2/src/algo/blast/api/dust_filter.cpp 2009-03-30 09:17:23.931531989 -0700
772 @@ -1,3 +1,4 @@
773 +#include <string.h>
774 /* $Id: dust_filter.cpp 103491 2007-05-04 17:18:18Z kazimird $
775 * ===========================================================================
776 *
777 diff -ur ncbisrc/src/algo/blast/api/psi_pssm_input.cpp ncbisrc2/src/algo/blast/api/psi_pssm_input.cpp
778 --- ncbisrc/src/algo/blast/api/psi_pssm_input.cpp 2008-04-15 08:27:44.000000000 -0700
779 +++ ncbisrc2/src/algo/blast/api/psi_pssm_input.cpp 2009-03-30 09:17:23.928178365 -0700
780 @@ -1,3 +1,4 @@
781 +#include <string.h>
782 #ifndef SKIP_DOXYGEN_PROCESSING
783 static char const rcsid[] =
784 "$Id: psi_pssm_input.cpp 124526 2008-04-15 15:27:44Z camacho $";
785 diff -ur ncbisrc/src/algo/blast/api/pssm_engine.cpp ncbisrc2/src/algo/blast/api/pssm_engine.cpp
786 --- ncbisrc/src/algo/blast/api/pssm_engine.cpp 2008-04-15 08:27:44.000000000 -0700
787 +++ ncbisrc2/src/algo/blast/api/pssm_engine.cpp 2009-03-30 09:17:23.958198469 -0700
788 @@ -1,3 +1,4 @@
789 +#include <string.h>
790 #ifndef SKIP_DOXYGEN_PROCESSING
791 static char const rcsid[] =
792 "$Id: pssm_engine.cpp 124526 2008-04-15 15:27:44Z camacho $";
793 diff -ur ncbisrc/src/algo/blast/api/remote_blast.cpp ncbisrc2/src/algo/blast/api/remote_blast.cpp
794 --- ncbisrc/src/algo/blast/api/remote_blast.cpp 2008-09-15 09:35:34.000000000 -0700
795 +++ ncbisrc2/src/algo/blast/api/remote_blast.cpp 2009-03-30 09:17:23.953617733 -0700
796 @@ -1,3 +1,4 @@
797 +#include <string.h>
798 /* $Id: remote_blast.cpp 140187 2008-09-15 16:35:34Z camacho $
799 * ===========================================================================
800 *
801 diff -ur ncbisrc/src/algo/blast/api/rps_aux.cpp ncbisrc2/src/algo/blast/api/rps_aux.cpp
802 --- ncbisrc/src/algo/blast/api/rps_aux.cpp 2008-09-22 11:25:56.000000000 -0700
803 +++ ncbisrc2/src/algo/blast/api/rps_aux.cpp 2009-03-30 09:17:23.961536187 -0700
804 @@ -1,3 +1,4 @@
805 +#include <string.h>
806 #ifndef SKIP_DOXYGEN_PROCESSING
807 static char const rcsid[] =
808 "$Id: rps_aux.cpp 140909 2008-09-22 18:25:56Z ucko $";
809 diff -ur ncbisrc/src/algo/blast/api/unit_test/bl2seq_unit_test.cpp ncbisrc2/src/algo/blast/api/unit_test/bl2seq_unit_test.cpp
810 --- ncbisrc/src/algo/blast/api/unit_test/bl2seq_unit_test.cpp 2008-08-25 11:19:42.000000000 -0700
811 +++ ncbisrc2/src/algo/blast/api/unit_test/bl2seq_unit_test.cpp 2009-03-30 09:17:23.948157123 -0700
812 @@ -1,3 +1,4 @@
813 +#include <string.h>
814 /* $Id: bl2seq_unit_test.cpp 138388 2008-08-25 18:19:42Z camacho $
815 * ===========================================================================
816 *
817 diff -ur ncbisrc/src/algo/blast/api/unit_test/remote_blast_unit_test.cpp ncbisrc2/src/algo/blast/api/unit_test/remote_blast_unit_test.cpp
818 --- ncbisrc/src/algo/blast/api/unit_test/remote_blast_unit_test.cpp 2008-09-15 09:35:34.000000000 -0700
819 +++ ncbisrc2/src/algo/blast/api/unit_test/remote_blast_unit_test.cpp 2009-03-30 09:17:23.944824865 -0700
820 @@ -1,3 +1,4 @@
821 +#include <string.h>
822 /* $Id: remote_blast_unit_test.cpp 140187 2008-09-15 16:35:34Z camacho $
823 * ===========================================================================
824 *
825 diff -ur ncbisrc/src/algo/blast/api/winmask_filter.cpp ncbisrc2/src/algo/blast/api/winmask_filter.cpp
826 --- ncbisrc/src/algo/blast/api/winmask_filter.cpp 2008-08-21 12:28:07.000000000 -0700
827 +++ ncbisrc2/src/algo/blast/api/winmask_filter.cpp 2009-03-30 09:17:23.934864432 -0700
828 @@ -1,3 +1,4 @@
829 +#include <string.h>
830 /* $Id: winmask_filter.cpp 138123 2008-08-21 19:28:07Z camacho $
831 * ===========================================================================
832 *
833 diff -ur ncbisrc/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp ncbisrc2/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp
834 --- ncbisrc/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp 2008-09-21 19:35:28.000000000 -0700
835 +++ ncbisrc2/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp 2009-03-30 09:17:23.971592443 -0700
836 @@ -1,3 +1,4 @@
837 +#include <string.h>
838 /* $Id: blast_scope_src_unit_test.cpp 140833 2008-09-22 02:35:28Z ucko $
839 * ===========================================================================
840 *
841 diff -ur ncbisrc/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp ncbisrc2/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp
842 --- ncbisrc/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp 2008-07-24 13:57:18.000000000 -0700
843 +++ ncbisrc2/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp 2009-03-30 09:17:23.974905201 -0700
844 @@ -1,3 +1,4 @@
845 +#include <string.h>
846 /* $Id: blastinput_unit_test.cpp 135448 2008-07-24 20:57:18Z camacho $
847 * ===========================================================================
848 *
849 diff -ur ncbisrc/src/algo/blast/composition_adjustment/compo_heap.c ncbisrc2/src/algo/blast/composition_adjustment/compo_heap.c
850 --- ncbisrc/src/algo/blast/composition_adjustment/compo_heap.c 2008-04-15 08:27:44.000000000 -0700
851 +++ ncbisrc2/src/algo/blast/composition_adjustment/compo_heap.c 2009-03-30 09:17:23.788238923 -0700
852 @@ -1,3 +1,4 @@
853 +#include <string.h>
854 /* ===========================================================================
855 *
856 * PUBLIC DOMAIN NOTICE
857 diff -ur ncbisrc/src/algo/blast/composition_adjustment/composition_adjustment.c ncbisrc2/src/algo/blast/composition_adjustment/composition_adjustment.c
858 --- ncbisrc/src/algo/blast/composition_adjustment/composition_adjustment.c 2008-08-21 12:28:07.000000000 -0700
859 +++ ncbisrc2/src/algo/blast/composition_adjustment/composition_adjustment.c 2009-03-30 09:17:23.791511318 -0700
860 @@ -1,3 +1,4 @@
861 +#include <string.h>
862 /* ===========================================================================
863 *
864 * PUBLIC DOMAIN NOTICE
865 diff -ur ncbisrc/src/algo/blast/composition_adjustment/matrix_frequency_data.c ncbisrc2/src/algo/blast/composition_adjustment/matrix_frequency_data.c
866 --- ncbisrc/src/algo/blast/composition_adjustment/matrix_frequency_data.c 2006-09-27 10:36:18.000000000 -0700
867 +++ ncbisrc2/src/algo/blast/composition_adjustment/matrix_frequency_data.c 2009-03-30 09:17:23.784905747 -0700
868 @@ -1,3 +1,4 @@
869 +#include <string.h>
870 /* ===========================================================================
871 *
872 * PUBLIC DOMAIN NOTICE
873 diff -ur ncbisrc/src/algo/blast/composition_adjustment/optimize_target_freq.c ncbisrc2/src/algo/blast/composition_adjustment/optimize_target_freq.c
874 --- ncbisrc/src/algo/blast/composition_adjustment/optimize_target_freq.c 2005-12-19 07:38:01.000000000 -0800
875 +++ ncbisrc2/src/algo/blast/composition_adjustment/optimize_target_freq.c 2009-03-30 09:17:23.798199066 -0700
876 @@ -1,3 +1,4 @@
877 +#include <string.h>
878 /* ===========================================================================
879 *
880 * PUBLIC DOMAIN NOTICE
881 diff -ur ncbisrc/src/algo/blast/core/blast_dynarray.c ncbisrc2/src/algo/blast/core/blast_dynarray.c
882 --- ncbisrc/src/algo/blast/core/blast_dynarray.c 2007-11-08 14:38:18.000000000 -0800
883 +++ ncbisrc2/src/algo/blast/core/blast_dynarray.c 2009-03-30 09:17:23.841511012 -0700
884 @@ -1,3 +1,4 @@
885 +#include <string.h>
886 /* $Id: blast_dynarray.c 113776 2007-11-08 22:38:18Z camacho $
887 * ===========================================================================
888 *
889 diff -ur ncbisrc/src/algo/blast/core/blast_engine.c ncbisrc2/src/algo/blast/core/blast_engine.c
890 --- ncbisrc/src/algo/blast/core/blast_engine.c 2008-07-17 10:42:49.000000000 -0700
891 +++ ncbisrc2/src/algo/blast/core/blast_engine.c 2009-03-30 09:17:23.838198314 -0700
892 @@ -1,3 +1,4 @@
893 +#include <string.h>
894 /* $Id: blast_engine.c 134303 2008-07-17 17:42:49Z camacho $
895 * ===========================================================================
896 *
897 diff -ur ncbisrc/src/algo/blast/core/blast_extend.c ncbisrc2/src/algo/blast/core/blast_extend.c
898 --- ncbisrc/src/algo/blast/core/blast_extend.c 2006-11-21 09:01:24.000000000 -0800
899 +++ ncbisrc2/src/algo/blast/core/blast_extend.c 2009-03-30 09:17:23.864845094 -0700
900 @@ -1,3 +1,4 @@
901 +#include <string.h>
902 /* $Id: blast_extend.c 94053 2006-11-21 17:01:24Z papadopo $
903 * ===========================================================================
904 *
905 diff -ur ncbisrc/src/algo/blast/core/blast_filter.c ncbisrc2/src/algo/blast/core/blast_filter.c
906 --- ncbisrc/src/algo/blast/core/blast_filter.c 2008-04-28 10:54:36.000000000 -0700
907 +++ ncbisrc2/src/algo/blast/core/blast_filter.c 2009-03-30 09:17:23.848238306 -0700
908 @@ -1,3 +1,4 @@
909 +#include <string.h>
910 /* $Id: blast_filter.c 125908 2008-04-28 17:54:36Z camacho $
911 * ===========================================================================
912 *
913 diff -ur ncbisrc/src/algo/blast/core/blast_gapalign.c ncbisrc2/src/algo/blast/core/blast_gapalign.c
914 --- ncbisrc/src/algo/blast/core/blast_gapalign.c 2008-07-17 10:42:49.000000000 -0700
915 +++ ncbisrc2/src/algo/blast/core/blast_gapalign.c 2009-03-30 09:17:23.811510863 -0700
916 @@ -1,3 +1,4 @@
917 +#include <string.h>
918 /* $Id: blast_gapalign.c 134303 2008-07-17 17:42:49Z camacho $
919 * ===========================================================================
920 *
921 diff -ur ncbisrc/src/algo/blast/core/blast_hits.c ncbisrc2/src/algo/blast/core/blast_hits.c
922 --- ncbisrc/src/algo/blast/core/blast_hits.c 2008-07-17 10:42:49.000000000 -0700
923 +++ ncbisrc2/src/algo/blast/core/blast_hits.c 2009-03-30 09:17:23.868218558 -0700
924 @@ -1,3 +1,4 @@
925 +#include <string.h>
926 /* $Id: blast_hits.c 134303 2008-07-17 17:42:49Z camacho $
927 * ===========================================================================
928 *
929 diff -ur ncbisrc/src/algo/blast/core/blast_kappa.c ncbisrc2/src/algo/blast/core/blast_kappa.c
930 --- ncbisrc/src/algo/blast/core/blast_kappa.c 2008-07-17 10:42:49.000000000 -0700
931 +++ ncbisrc2/src/algo/blast/core/blast_kappa.c 2009-03-30 09:17:23.874845160 -0700
932 @@ -1,3 +1,4 @@
933 +#include <string.h>
934 /* $Id: blast_kappa.c 134303 2008-07-17 17:42:49Z camacho $
935 * ==========================================================================
936 *
937 diff -ur ncbisrc/src/algo/blast/core/blast_message.c ncbisrc2/src/algo/blast/core/blast_message.c
938 --- ncbisrc/src/algo/blast/core/blast_message.c 2008-07-17 10:42:49.000000000 -0700
939 +++ ncbisrc2/src/algo/blast/core/blast_message.c 2009-03-30 09:17:23.824946579 -0700
940 @@ -1,3 +1,4 @@
941 +#include <string.h>
942 /* $Id: blast_message.c 134303 2008-07-17 17:42:49Z camacho $
943 * ===========================================================================
944 *
945 diff -ur ncbisrc/src/algo/blast/core/blast_nalookup.c ncbisrc2/src/algo/blast/core/blast_nalookup.c
946 --- ncbisrc/src/algo/blast/core/blast_nalookup.c 2008-07-17 10:42:49.000000000 -0700
947 +++ ncbisrc2/src/algo/blast/core/blast_nalookup.c 2009-03-30 09:17:23.804824112 -0700
948 @@ -1,3 +1,4 @@
949 +#include <string.h>
950 /* $Id: blast_nalookup.c 134303 2008-07-17 17:42:49Z camacho $
951 * ===========================================================================
952 *
953 diff -ur ncbisrc/src/algo/blast/core/blast_options.c ncbisrc2/src/algo/blast/core/blast_options.c
954 --- ncbisrc/src/algo/blast/core/blast_options.c 2008-04-28 10:54:36.000000000 -0700
955 +++ ncbisrc2/src/algo/blast/core/blast_options.c 2009-03-30 09:17:23.814905410 -0700
956 @@ -1,3 +1,4 @@
957 +#include <string.h>
958 /* $Id: blast_options.c 125908 2008-04-28 17:54:36Z camacho $
959 * ===========================================================================
960 *
961 diff -ur ncbisrc/src/algo/blast/core/blast_psi.c ncbisrc2/src/algo/blast/core/blast_psi.c
962 --- ncbisrc/src/algo/blast/core/blast_psi.c 2008-04-15 08:27:44.000000000 -0700
963 +++ ncbisrc2/src/algo/blast/core/blast_psi.c 2009-03-30 09:17:23.878259445 -0700
964 @@ -1,3 +1,4 @@
965 +#include <string.h>
966 #ifndef SKIP_DOXYGEN_PROCESSING
967 static char const rcsid[] =
968 "$Id: blast_psi.c 124526 2008-04-15 15:27:44Z camacho $";
969 diff -ur ncbisrc/src/algo/blast/core/blast_psi_priv.c ncbisrc2/src/algo/blast/core/blast_psi_priv.c
970 --- ncbisrc/src/algo/blast/core/blast_psi_priv.c 2008-04-15 08:27:44.000000000 -0700
971 +++ ncbisrc2/src/algo/blast/core/blast_psi_priv.c 2009-03-30 09:17:23.821592714 -0700
972 @@ -1,3 +1,4 @@
973 +#include <string.h>
974 #ifndef SKIP_DOXYGEN_PROCESSING
975 static char const rcsid[] =
976 "$Id: blast_psi_priv.c 124526 2008-04-15 15:27:44Z camacho $";
977 diff -ur ncbisrc/src/algo/blast/core/blast_query_info.c ncbisrc2/src/algo/blast/core/blast_query_info.c
978 --- ncbisrc/src/algo/blast/core/blast_query_info.c 2008-07-17 10:42:49.000000000 -0700
979 +++ ncbisrc2/src/algo/blast/core/blast_query_info.c 2009-03-30 09:17:23.801571698 -0700
980 @@ -1,3 +1,4 @@
981 +#include <string.h>
982 /* $Id: blast_query_info.c 134303 2008-07-17 17:42:49Z camacho $
983 * ===========================================================================
984 *
985 diff -ur ncbisrc/src/algo/blast/core/blast_setup.c ncbisrc2/src/algo/blast/core/blast_setup.c
986 --- ncbisrc/src/algo/blast/core/blast_setup.c 2008-07-17 10:42:49.000000000 -0700
987 +++ ncbisrc2/src/algo/blast/core/blast_setup.c 2009-03-30 09:17:23.891591995 -0700
988 @@ -1,3 +1,4 @@
989 +#include <string.h>
990 /* $Id: blast_setup.c 134303 2008-07-17 17:42:49Z camacho $
991 * ===========================================================================
992 *
993 diff -ur ncbisrc/src/algo/blast/core/blast_stat.c ncbisrc2/src/algo/blast/core/blast_stat.c
994 --- ncbisrc/src/algo/blast/core/blast_stat.c 2008-09-15 09:35:34.000000000 -0700
995 +++ ncbisrc2/src/algo/blast/core/blast_stat.c 2009-03-30 09:17:23.884864294 -0700
996 @@ -1,3 +1,4 @@
997 +#include <string.h>
998 /* $Id: blast_stat.c 140187 2008-09-15 16:35:34Z camacho $
999 * ===========================================================================
1000 *
1001 diff -ur ncbisrc/src/algo/blast/core/blast_sw.c ncbisrc2/src/algo/blast/core/blast_sw.c
1002 --- ncbisrc/src/algo/blast/core/blast_sw.c 2008-07-17 10:42:49.000000000 -0700
1003 +++ ncbisrc2/src/algo/blast/core/blast_sw.c 2009-03-30 09:17:23.828219230 -0700
1004 @@ -1,3 +1,4 @@
1005 +#include <string.h>
1006 /* $Id: blast_sw.c 134303 2008-07-17 17:42:49Z camacho $
1007 * ===========================================================================
1008 *
1009 diff -ur ncbisrc/src/algo/blast/core/blast_traceback.c ncbisrc2/src/algo/blast/core/blast_traceback.c
1010 --- ncbisrc/src/algo/blast/core/blast_traceback.c 2008-07-17 10:42:49.000000000 -0700
1011 +++ ncbisrc2/src/algo/blast/core/blast_traceback.c 2009-03-30 09:17:23.888218926 -0700
1012 @@ -1,3 +1,4 @@
1013 +#include <string.h>
1014 /* $Id: blast_traceback.c 134303 2008-07-17 17:42:49Z camacho $
1015 * ===========================================================================
1016 *
1017 diff -ur ncbisrc/src/algo/blast/core/blast_tune.c ncbisrc2/src/algo/blast/core/blast_tune.c
1018 --- ncbisrc/src/algo/blast/core/blast_tune.c 2006-11-21 09:19:42.000000000 -0800
1019 +++ ncbisrc2/src/algo/blast/core/blast_tune.c 2009-03-30 09:17:23.908177560 -0700
1020 @@ -1,3 +1,4 @@
1021 +#include <string.h>
1022 /* $Id: blast_tune.c 94064 2006-11-21 17:19:42Z papadopo $
1023 * ===========================================================================
1024 *
1025 diff -ur ncbisrc/src/algo/blast/core/blast_util.c ncbisrc2/src/algo/blast/core/blast_util.c
1026 --- ncbisrc/src/algo/blast/core/blast_util.c 2008-08-21 12:28:07.000000000 -0700
1027 +++ ncbisrc2/src/algo/blast/core/blast_util.c 2009-03-30 09:17:23.854865289 -0700
1028 @@ -1,3 +1,4 @@
1029 +#include <string.h>
1030 /* $Id: blast_util.c 138123 2008-08-21 19:28:07Z camacho $
1031 * ===========================================================================
1032 *
1033 diff -ur ncbisrc/src/algo/blast/core/gapinfo.c ncbisrc2/src/algo/blast/core/gapinfo.c
1034 --- ncbisrc/src/algo/blast/core/gapinfo.c 2006-11-21 09:19:42.000000000 -0800
1035 +++ ncbisrc2/src/algo/blast/core/gapinfo.c 2009-03-30 09:17:23.851531981 -0700
1036 @@ -1,3 +1,4 @@
1037 +#include <string.h>
1038 /* $Id: gapinfo.c 94064 2006-11-21 17:19:42Z papadopo $
1039 * ===========================================================================
1040 *
1041 diff -ur ncbisrc/src/algo/blast/core/link_hsps.c ncbisrc2/src/algo/blast/core/link_hsps.c
1042 --- ncbisrc/src/algo/blast/core/link_hsps.c 2008-07-17 10:42:49.000000000 -0700
1043 +++ ncbisrc2/src/algo/blast/core/link_hsps.c 2009-03-30 09:17:23.831531154 -0700
1044 @@ -1,3 +1,4 @@
1045 +#include <string.h>
1046
1047 /* $Id: link_hsps.c 134303 2008-07-17 17:42:49Z camacho $
1048 * ===========================================================================
1049 diff -ur ncbisrc/src/algo/blast/core/matrix_freq_ratios.c ncbisrc2/src/algo/blast/core/matrix_freq_ratios.c
1050 --- ncbisrc/src/algo/blast/core/matrix_freq_ratios.c 2007-03-05 12:41:55.000000000 -0800
1051 +++ ncbisrc2/src/algo/blast/core/matrix_freq_ratios.c 2009-03-30 09:17:23.861531284 -0700
1052 @@ -1,3 +1,4 @@
1053 +#include <string.h>
1054 #ifndef SKIP_DOXYGEN_PROCESSING
1055 static char const rcsid[] =
1056 "$Id: matrix_freq_ratios.c 99676 2007-03-05 20:41:55Z kazimird $";
1057 diff -ur ncbisrc/src/algo/blast/core/ncbi_std.c ncbisrc2/src/algo/blast/core/ncbi_std.c
1058 --- ncbisrc/src/algo/blast/core/ncbi_std.c 2005-11-16 06:31:37.000000000 -0800
1059 +++ ncbisrc2/src/algo/blast/core/ncbi_std.c 2009-03-30 09:17:23.914904847 -0700
1060 @@ -1,3 +1,4 @@
1061 +#include <string.h>
1062 /* $Id: ncbi_std.c 72729 2005-11-16 14:31:37Z madden $
1063 * ===========================================================================
1064 *
1065 diff -ur ncbisrc/src/algo/blast/core/pattern.c ncbisrc2/src/algo/blast/core/pattern.c
1066 --- ncbisrc/src/algo/blast/core/pattern.c 2008-07-17 10:42:49.000000000 -0700
1067 +++ ncbisrc2/src/algo/blast/core/pattern.c 2009-03-30 09:17:23.904844121 -0700
1068 @@ -1,3 +1,4 @@
1069 +#include <string.h>
1070 /* $Id: pattern.c 134303 2008-07-17 17:42:49Z camacho $
1071 * ===========================================================================
1072 *
1073 diff -ur ncbisrc/src/algo/blast/core/phi_lookup.c ncbisrc2/src/algo/blast/core/phi_lookup.c
1074 --- ncbisrc/src/algo/blast/core/phi_lookup.c 2006-11-21 09:14:28.000000000 -0800
1075 +++ ncbisrc2/src/algo/blast/core/phi_lookup.c 2009-03-30 09:17:23.918218819 -0700
1076 @@ -1,3 +1,4 @@
1077 +#include <string.h>
1078 /* $Id: phi_lookup.c 94060 2006-11-21 17:14:28Z papadopo $
1079 * ===========================================================================
1080 *
1081 diff -ur ncbisrc/src/algo/blast/core/split_query.c ncbisrc2/src/algo/blast/core/split_query.c
1082 --- ncbisrc/src/algo/blast/core/split_query.c 2007-05-04 10:18:18.000000000 -0700
1083 +++ ncbisrc2/src/algo/blast/core/split_query.c 2009-03-30 09:17:23.898177588 -0700
1084 @@ -1,3 +1,4 @@
1085 +#include <string.h>
1086 /* $Id: split_query.c 103491 2007-05-04 17:18:18Z kazimird $
1087 * ===========================================================================
1088 *
1089 diff -ur ncbisrc/src/algo/cobalt/cobalt.cpp ncbisrc2/src/algo/cobalt/cobalt.cpp
1090 --- ncbisrc/src/algo/cobalt/cobalt.cpp 2008-09-15 10:40:34.000000000 -0700
1091 +++ ncbisrc2/src/algo/cobalt/cobalt.cpp 2009-03-30 09:17:23.998157505 -0700
1092 @@ -1,3 +1,4 @@
1093 +#include <string.h>
1094 static char const rcsid[] = "$Id: cobalt.cpp 140192 2008-09-15 17:40:34Z boratyng $";
1095
1096 /*
1097 diff -ur ncbisrc/src/algo/cobalt/kmercounts.cpp ncbisrc2/src/algo/cobalt/kmercounts.cpp
1098 --- ncbisrc/src/algo/cobalt/kmercounts.cpp 2008-09-09 13:29:16.000000000 -0700
1099 +++ ncbisrc2/src/algo/cobalt/kmercounts.cpp 2009-03-30 09:17:23.984864773 -0700
1100 @@ -1,3 +1,4 @@
1101 +#include <string.h>
1102 /*
1103 * ===========================================================================
1104 *
1105 diff -ur ncbisrc/src/algo/cobalt/prog.cpp ncbisrc2/src/algo/cobalt/prog.cpp
1106 --- ncbisrc/src/algo/cobalt/prog.cpp 2007-08-14 09:12:22.000000000 -0700
1107 +++ ncbisrc2/src/algo/cobalt/prog.cpp 2009-03-30 09:17:24.001490688 -0700
1108 @@ -1,3 +1,4 @@
1109 +#include <string.h>
1110 static char const rcsid[] = "$Id: prog.cpp 108836 2007-08-14 16:12:22Z papadopo $";
1111
1112 /*
1113 diff -ur ncbisrc/src/algo/cobalt/resfreq.cpp ncbisrc2/src/algo/cobalt/resfreq.cpp
1114 --- ncbisrc/src/algo/cobalt/resfreq.cpp 2007-05-04 10:18:18.000000000 -0700
1115 +++ ncbisrc2/src/algo/cobalt/resfreq.cpp 2009-03-30 09:17:24.004987045 -0700
1116 @@ -1,3 +1,4 @@
1117 +#include <string.h>
1118 static char const rcsid[] = "$Id: resfreq.cpp 103491 2007-05-04 17:18:18Z kazimird $";
1119
1120 /*
1121 diff -ur ncbisrc/src/algo/gnomon/score.cpp ncbisrc2/src/algo/gnomon/score.cpp
1122 --- ncbisrc/src/algo/gnomon/score.cpp 2008-08-27 13:07:15.000000000 -0700
1123 +++ ncbisrc2/src/algo/gnomon/score.cpp 2009-03-30 09:17:23.778158880 -0700
1124 @@ -1,3 +1,4 @@
1125 +#include <string.h>
1126 /* $Id: score.cpp 138712 2008-08-27 20:07:15Z souvorov $
1127 * ===========================================================================
1128 *
1129 diff -ur ncbisrc/src/algo/ms/omssa/SpectrumSet.cpp ncbisrc2/src/algo/ms/omssa/SpectrumSet.cpp
1130 --- ncbisrc/src/algo/ms/omssa/SpectrumSet.cpp 2008-08-08 09:17:07.000000000 -0700
1131 +++ ncbisrc2/src/algo/ms/omssa/SpectrumSet.cpp 2009-03-30 09:17:24.034480718 -0700
1132 @@ -1,3 +1,4 @@
1133 +#include <string.h>
1134 /* $Id: SpectrumSet.cpp 136925 2008-08-08 16:17:07Z lewisg $
1135 * ===========================================================================
1136 *
1137 diff -ur ncbisrc/src/algo/ms/omssa/omssa.hpp ncbisrc2/src/algo/ms/omssa/omssa.hpp
1138 --- ncbisrc/src/algo/ms/omssa/omssa.hpp 2008-09-22 11:25:56.000000000 -0700
1139 +++ ncbisrc2/src/algo/ms/omssa/omssa.hpp 2009-03-30 09:21:44.040269678 -0700
1140 @@ -63,6 +63,7 @@
1141
1142 #include <vector>
1143 #include <set>
1144 +#include <string.h>
1145
1146 BEGIN_NCBI_SCOPE
1147 BEGIN_SCOPE(objects)
1148 Only in ncbisrc2/src/algo/ms/omssa: omssa.hpp~
1149 diff -ur ncbisrc/src/algo/phy_tree/fastme/fastme.cpp ncbisrc2/src/algo/phy_tree/fastme/fastme.cpp
1150 --- ncbisrc/src/algo/phy_tree/fastme/fastme.cpp 2007-05-04 10:18:18.000000000 -0700
1151 +++ ncbisrc2/src/algo/phy_tree/fastme/fastme.cpp 2009-03-30 09:17:24.028198245 -0700
1152 @@ -1,3 +1,4 @@
1153 +#include <string.h>
1154 /* $Id: fastme.cpp 103491 2007-05-04 17:18:18Z kazimird $
1155 * ===========================================================================
1156 *
1157 diff -ur ncbisrc/src/algo/phy_tree/fastme/graph.cpp ncbisrc2/src/algo/phy_tree/fastme/graph.cpp
1158 --- ncbisrc/src/algo/phy_tree/fastme/graph.cpp 2008-05-20 08:29:38.000000000 -0700
1159 +++ ncbisrc2/src/algo/phy_tree/fastme/graph.cpp 2009-03-30 09:17:24.021491241 -0700
1160 @@ -1,3 +1,4 @@
1161 +#include <string.h>
1162 /* $Id: graph.cpp 128093 2008-05-20 15:29:38Z jcherry $
1163 * ===========================================================================
1164 *
1165 diff -ur ncbisrc/src/algo/phy_tree/fastme/inputs.cpp ncbisrc2/src/algo/phy_tree/fastme/inputs.cpp
1166 --- ncbisrc/src/algo/phy_tree/fastme/inputs.cpp 2007-05-04 10:18:18.000000000 -0700
1167 +++ ncbisrc2/src/algo/phy_tree/fastme/inputs.cpp 2009-03-30 09:17:24.031490658 -0700
1168 @@ -1,3 +1,4 @@
1169 +#include <string.h>
1170 /* $Id: inputs.cpp 103491 2007-05-04 17:18:18Z kazimird $
1171 * ===========================================================================
1172 *
1173 diff -ur ncbisrc/src/algo/phy_tree/lex.newick.cpp ncbisrc2/src/algo/phy_tree/lex.newick.cpp
1174 --- ncbisrc/src/algo/phy_tree/lex.newick.cpp 2008-05-01 07:38:45.000000000 -0700
1175 +++ ncbisrc2/src/algo/phy_tree/lex.newick.cpp 2009-03-30 09:17:24.014865266 -0700
1176 @@ -1,3 +1,4 @@
1177 +#include <string.h>
1178 #include <ncbi_pch.hpp>
1179
1180 #define yy_create_buffer newick_create_buffer
1181 diff -ur ncbisrc/src/algo/phy_tree/newick.tab.cpp ncbisrc2/src/algo/phy_tree/newick.tab.cpp
1182 --- ncbisrc/src/algo/phy_tree/newick.tab.cpp 2008-05-13 09:41:19.000000000 -0700
1183 +++ ncbisrc2/src/algo/phy_tree/newick.tab.cpp 2009-03-30 09:17:24.018218287 -0700
1184 @@ -1,3 +1,4 @@
1185 +#include <string.h>
1186 #include <ncbi_pch.hpp>
1187
1188 /* A Bison parser, made by GNU Bison 1.875. */
1189 diff -ur ncbisrc/src/algo/seqqa/seqtest.cpp ncbisrc2/src/algo/seqqa/seqtest.cpp
1190 --- ncbisrc/src/algo/seqqa/seqtest.cpp 2007-05-04 10:18:18.000000000 -0700
1191 +++ ncbisrc2/src/algo/seqqa/seqtest.cpp 2009-03-30 09:17:23.981531363 -0700
1192 @@ -1,3 +1,4 @@
1193 +#include <string.h>
1194 /* $Id: seqtest.cpp 103491 2007-05-04 17:18:18Z kazimird $
1195 * ===========================================================================
1196 *
1197 diff -ur ncbisrc/src/algo/sequence/compare_feats.cpp ncbisrc2/src/algo/sequence/compare_feats.cpp
1198 --- ncbisrc/src/algo/sequence/compare_feats.cpp 2008-07-23 13:45:19.000000000 -0700
1199 +++ ncbisrc2/src/algo/sequence/compare_feats.cpp 2009-03-30 09:17:24.038197956 -0700
1200 @@ -1,3 +1,4 @@
1201 +#include <string.h>
1202 /* $Id: compare_feats.cpp 135226 2008-07-23 20:45:19Z astashya $
1203 * ===========================================================================
1204 *
1205 diff -ur ncbisrc/src/algo/structure/bma_refine/BMAUtils.cpp ncbisrc2/src/algo/structure/bma_refine/BMAUtils.cpp
1206 --- ncbisrc/src/algo/structure/bma_refine/BMAUtils.cpp 2007-05-04 10:18:18.000000000 -0700
1207 +++ ncbisrc2/src/algo/structure/bma_refine/BMAUtils.cpp 2009-03-30 09:17:24.048177512 -0700
1208 @@ -1,3 +1,4 @@
1209 +#include <string.h>
1210 /* $Id: BMAUtils.cpp 103491 2007-05-04 17:18:18Z kazimird $
1211 * ===========================================================================
1212 *
1213 diff -ur ncbisrc/src/algo/structure/bma_refine/BlockEditor.cpp ncbisrc2/src/algo/structure/bma_refine/BlockEditor.cpp
1214 --- ncbisrc/src/algo/structure/bma_refine/BlockEditor.cpp 2007-05-04 10:18:18.000000000 -0700
1215 +++ ncbisrc2/src/algo/structure/bma_refine/BlockEditor.cpp 2009-03-30 09:17:24.051490862 -0700
1216 @@ -1,3 +1,4 @@
1217 +#include <string.h>
1218 /* $Id: BlockEditor.cpp 103491 2007-05-04 17:18:18Z kazimird $
1219 * ===========================================================================
1220 *
1221 diff -ur ncbisrc/src/algo/structure/cd_utils/cuAlign.cpp ncbisrc2/src/algo/structure/cd_utils/cuAlign.cpp
1222 --- ncbisrc/src/algo/structure/cd_utils/cuAlign.cpp 2008-07-16 09:37:42.000000000 -0700
1223 +++ ncbisrc2/src/algo/structure/cd_utils/cuAlign.cpp 2009-03-30 09:17:24.061572579 -0700
1224 @@ -1,3 +1,4 @@
1225 +#include <string.h>
1226 /* $Id: cuAlign.cpp 134091 2008-07-16 16:37:42Z lanczyck $
1227 * ===========================================================================
1228 *
1229 diff -ur ncbisrc/src/algo/structure/cd_utils/cuMatrix.cpp ncbisrc2/src/algo/structure/cd_utils/cuMatrix.cpp
1230 --- ncbisrc/src/algo/structure/cd_utils/cuMatrix.cpp 2007-05-04 10:18:18.000000000 -0700
1231 +++ ncbisrc2/src/algo/structure/cd_utils/cuMatrix.cpp 2009-03-30 09:17:24.064945601 -0700
1232 @@ -1,3 +1,4 @@
1233 +#include <string.h>
1234 /* $Id: cuMatrix.cpp 103491 2007-05-04 17:18:18Z kazimird $
1235 * ===========================================================================
1236 *
1237 diff -ur ncbisrc/src/algo/structure/cd_utils/cuPssmMaker.cpp ncbisrc2/src/algo/structure/cd_utils/cuPssmMaker.cpp
1238 --- ncbisrc/src/algo/structure/cd_utils/cuPssmMaker.cpp 2008-07-07 11:34:41.000000000 -0700
1239 +++ ncbisrc2/src/algo/structure/cd_utils/cuPssmMaker.cpp 2009-03-30 09:17:24.068157150 -0700
1240 @@ -1,3 +1,4 @@
1241 +#include <string.h>
1242 /* $Id: cuPssmMaker.cpp 133085 2008-07-07 18:34:41Z lanczyck $
1243 * ===========================================================================
1244 *
1245 diff -ur ncbisrc/src/algo/structure/cd_utils/cuReadFastaWrapper.cpp ncbisrc2/src/algo/structure/cd_utils/cuReadFastaWrapper.cpp
1246 --- ncbisrc/src/algo/structure/cd_utils/cuReadFastaWrapper.cpp 2007-05-07 07:58:34.000000000 -0700
1247 +++ ncbisrc2/src/algo/structure/cd_utils/cuReadFastaWrapper.cpp 2009-03-30 09:17:24.078259113 -0700
1248 @@ -1,3 +1,4 @@
1249 +#include <string.h>
1250 /* $Id: cuReadFastaWrapper.cpp 103525 2007-05-07 14:58:34Z lanczyck $
1251 * ===========================================================================
1252 *
1253 diff -ur ncbisrc/src/algo/structure/cd_utils/cuScoringMatrix.cpp ncbisrc2/src/algo/structure/cd_utils/cuScoringMatrix.cpp
1254 --- ncbisrc/src/algo/structure/cd_utils/cuScoringMatrix.cpp 2007-05-04 10:18:18.000000000 -0700
1255 +++ ncbisrc2/src/algo/structure/cd_utils/cuScoringMatrix.cpp 2009-03-30 09:17:24.054865297 -0700
1256 @@ -1,3 +1,4 @@
1257 +#include <string.h>
1258 /* $Id: cuScoringMatrix.cpp 103491 2007-05-04 17:18:18Z kazimird $
1259 * ===========================================================================
1260 *
1261 diff -ur ncbisrc/src/algo/structure/cd_utils/cuSeqTreeStream.cpp ncbisrc2/src/algo/structure/cd_utils/cuSeqTreeStream.cpp
1262 --- ncbisrc/src/algo/structure/cd_utils/cuSeqTreeStream.cpp 2007-05-04 10:18:18.000000000 -0700
1263 +++ ncbisrc2/src/algo/structure/cd_utils/cuSeqTreeStream.cpp 2009-03-30 09:17:24.071492456 -0700
1264 @@ -1,3 +1,4 @@
1265 +#include <string.h>
1266 /* $Id: cuSeqTreeStream.cpp 103491 2007-05-04 17:18:18Z kazimird $
1267 * ===========================================================================
1268 *
1269 diff -ur ncbisrc/src/algo/structure/cd_utils/cuUtils.cpp ncbisrc2/src/algo/structure/cd_utils/cuUtils.cpp
1270 --- ncbisrc/src/algo/structure/cd_utils/cuUtils.cpp 2007-05-04 10:18:18.000000000 -0700
1271 +++ ncbisrc2/src/algo/structure/cd_utils/cuUtils.cpp 2009-03-30 09:17:24.081532082 -0700
1272 @@ -1,3 +1,4 @@
1273 +#include <string.h>
1274 /* $Id: cuUtils.cpp 103491 2007-05-04 17:18:18Z kazimird $
1275 * ===========================================================================
1276 *
1277 diff -ur ncbisrc/src/algo/structure/threader/thrdatd.c ncbisrc2/src/algo/structure/threader/thrdatd.c
1278 --- ncbisrc/src/algo/structure/threader/thrdatd.c 2007-03-05 12:41:55.000000000 -0800
1279 +++ ncbisrc2/src/algo/structure/threader/thrdatd.c 2009-03-30 09:17:24.084905912 -0700
1280 @@ -1,3 +1,4 @@
1281 +#include <string.h>
1282 /* $Id: thrdatd.c 99676 2007-03-05 20:41:55Z kazimird $
1283 *===========================================================================
1284 *
1285 diff -ur ncbisrc/src/algo/text/vector_serial.cpp ncbisrc2/src/algo/text/vector_serial.cpp
1286 --- ncbisrc/src/algo/text/vector_serial.cpp 2008-07-23 12:41:58.000000000 -0700
1287 +++ ncbisrc2/src/algo/text/vector_serial.cpp 2009-03-30 09:17:24.044865094 -0700
1288 @@ -1,3 +1,4 @@
1289 +#include <string.h>
1290 /* $Id: vector_serial.cpp 135205 2008-07-23 19:41:58Z vakatov $
1291 * ===========================================================================
1292 *
1293 diff -ur ncbisrc/src/algo/volume_merge/volume_merge.cpp ncbisrc2/src/algo/volume_merge/volume_merge.cpp
1294 --- ncbisrc/src/algo/volume_merge/volume_merge.cpp 2007-11-12 18:00:31.000000000 -0800
1295 +++ ncbisrc2/src/algo/volume_merge/volume_merge.cpp 2009-03-30 09:17:24.011571631 -0700
1296 @@ -1,3 +1,4 @@
1297 +#include <string.h>
1298 /* $Id: volume_merge.cpp 113919 2007-11-13 02:00:31Z dicuccio $
1299 * ===========================================================================
1300 *
1301 diff -ur ncbisrc/src/algo/winmask/seq_masker_istat_ascii.cpp ncbisrc2/src/algo/winmask/seq_masker_istat_ascii.cpp
1302 --- ncbisrc/src/algo/winmask/seq_masker_istat_ascii.cpp 2008-03-19 12:14:23.000000000 -0700
1303 +++ ncbisrc2/src/algo/winmask/seq_masker_istat_ascii.cpp 2009-03-30 09:17:24.134965896 -0700
1304 @@ -1,3 +1,4 @@
1305 +#include <string.h>
1306 /* $Id: seq_masker_istat_ascii.cpp 122478 2008-03-19 19:14:23Z morgulis $
1307 * ===========================================================================
1308 *
1309 diff -ur ncbisrc/src/algo/winmask/seq_masker_ostat.cpp ncbisrc2/src/algo/winmask/seq_masker_ostat.cpp
1310 --- ncbisrc/src/algo/winmask/seq_masker_ostat.cpp 2007-05-04 10:18:18.000000000 -0700
1311 +++ ncbisrc2/src/algo/winmask/seq_masker_ostat.cpp 2009-03-30 09:17:24.124864561 -0700
1312 @@ -1,3 +1,4 @@
1313 +#include <string.h>
1314 /* $Id: seq_masker_ostat.cpp 103491 2007-05-04 17:18:18Z kazimird $
1315 * ===========================================================================
1316 *
1317 diff -ur ncbisrc/src/algo/winmask/seq_masker_ostat_ascii.cpp ncbisrc2/src/algo/winmask/seq_masker_ostat_ascii.cpp
1318 --- ncbisrc/src/algo/winmask/seq_masker_ostat_ascii.cpp 2007-05-04 10:18:18.000000000 -0700
1319 +++ ncbisrc2/src/algo/winmask/seq_masker_ostat_ascii.cpp 2009-03-30 09:17:24.131511751 -0700
1320 @@ -1,3 +1,4 @@
1321 +#include <string.h>
1322 /* $Id: seq_masker_ostat_ascii.cpp 103491 2007-05-04 17:18:18Z kazimird $
1323 * ===========================================================================
1324 *
1325 diff -ur ncbisrc/src/app/agp_validate/AgpErrEx.hpp ncbisrc2/src/app/agp_validate/AgpErrEx.hpp
1326 --- ncbisrc/src/app/agp_validate/AgpErrEx.hpp 2008-08-27 12:07:46.000000000 -0700
1327 +++ ncbisrc2/src/app/agp_validate/AgpErrEx.hpp 2009-03-30 08:34:59.123828252 -0700
1328 @@ -40,6 +40,7 @@
1329 #include <corelib/ncbistd.hpp>
1330 #include <iostream>
1331 #include <objtools/readers/agp_util.hpp>
1332 +#include <string.h>
1333
1334 BEGIN_NCBI_SCOPE
1335
1336 Only in ncbisrc2/src/app/agp_validate: AgpErrEx.hpp~
1337 diff -ur ncbisrc/src/app/agp_validate/AltValidator.cpp ncbisrc2/src/app/agp_validate/AltValidator.cpp
1338 --- ncbisrc/src/app/agp_validate/AltValidator.cpp 2008-01-14 13:46:14.000000000 -0800
1339 +++ ncbisrc2/src/app/agp_validate/AltValidator.cpp 2009-03-30 08:34:26.983841946 -0700
1340 @@ -34,6 +34,7 @@
1341 #include <ncbi_pch.hpp>
1342
1343 #include "AltValidator.hpp"
1344 +#include <string.h>
1345
1346 // Objects includes
1347 #include <objects/seq/Bioseq.hpp>
1348 Only in ncbisrc2/src/app/agp_validate: AltValidator.cpp~
1349 diff -ur ncbisrc/src/app/agp_validate/ContextValidator.cpp ncbisrc2/src/app/agp_validate/ContextValidator.cpp
1350 --- ncbisrc/src/app/agp_validate/ContextValidator.cpp 2008-08-27 12:07:46.000000000 -0700
1351 +++ ncbisrc2/src/app/agp_validate/ContextValidator.cpp 2009-03-30 08:35:21.407169879 -0700
1352 @@ -33,7 +33,7 @@
1353 */
1354
1355 #include <ncbi_pch.hpp>
1356 -
1357 +#include <string.h>
1358 #include "ContextValidator.hpp"
1359 #include <algorithm>
1360 #include <objects/seqloc/Seq_id.hpp>
1361 Only in ncbisrc2/src/app/agp_validate: ContextValidator.cpp~
1362 diff -ur ncbisrc/src/app/agp_validate/agp_renumber.cpp ncbisrc2/src/app/agp_validate/agp_renumber.cpp
1363 --- ncbisrc/src/app/agp_validate/agp_renumber.cpp 2008-06-05 13:30:16.000000000 -0700
1364 +++ ncbisrc2/src/app/agp_validate/agp_renumber.cpp 2009-03-30 08:34:41.530507133 -0700
1365 @@ -36,7 +36,7 @@
1366 #include <corelib/ncbiargs.hpp>
1367 #include <corelib/ncbienv.hpp>
1368 #include <corelib/ncbifile.hpp>
1369 -
1370 +#include <string.h>
1371 #include <objtools/readers/agp_util.hpp>
1372
1373 USING_NCBI_SCOPE;
1374 Only in ncbisrc2/src/app/agp_validate: agp_renumber.cpp~
1375 diff -ur ncbisrc/src/app/agp_validate/agp_validate.cpp ncbisrc2/src/app/agp_validate/agp_validate.cpp
1376 --- ncbisrc/src/app/agp_validate/agp_validate.cpp 2008-08-27 12:07:46.000000000 -0700
1377 +++ ncbisrc2/src/app/agp_validate/agp_validate.cpp 2009-03-30 08:34:10.950510006 -0700
1378 @@ -34,6 +34,8 @@
1379 *
1380 */
1381
1382 +#include <string.h>
1383 +
1384 #include <ncbi_pch.hpp>
1385
1386 #include <corelib/ncbiapp.hpp>
1387 Only in ncbisrc2/src/app/agp_validate: agp_validate.cpp~
1388 diff -ur ncbisrc/src/app/blast/data4xmlformat.cpp ncbisrc2/src/app/blast/data4xmlformat.cpp
1389 --- ncbisrc/src/app/blast/data4xmlformat.cpp 2008-09-22 11:25:56.000000000 -0700
1390 +++ ncbisrc2/src/app/blast/data4xmlformat.cpp 2009-03-30 08:36:33.313829172 -0700
1391 @@ -35,6 +35,7 @@
1392 * Produce data required for generating BLAST XML output
1393 */
1394
1395 +#include <string.h>
1396 #include <ncbi_pch.hpp>
1397 #include <objects/seq/Seq_annot.hpp>
1398 #include <objtools/blast/seqdb_reader/seqdb.hpp>
1399 Only in ncbisrc2/src/app/blast: data4xmlformat.cpp~
1400 diff -ur ncbisrc/src/app/blastdb/blastdb_aliastool.cpp ncbisrc2/src/app/blastdb/blastdb_aliastool.cpp
1401 --- ncbisrc/src/app/blastdb/blastdb_aliastool.cpp 2008-09-22 11:25:56.000000000 -0700
1402 +++ ncbisrc2/src/app/blastdb/blastdb_aliastool.cpp 2009-03-30 08:14:52.537920420 -0700
1403 @@ -31,6 +31,8 @@
1404 * Command line tool to create BLAST database aliases and associated files.
1405 */
1406
1407 +#include <string.h>
1408 +
1409 #ifndef SKIP_DOXYGEN_PROCESSING
1410 static char const rcsid[] =
1411 "$Id: blastdb_aliastool.cpp 140909 2008-09-22 18:25:56Z ucko $";
1412 Only in ncbisrc2/src/app/blastdb: blastdb_aliastool.cpp~
1413 diff -ur ncbisrc/src/app/cn3d/cn3d_app.cpp ncbisrc2/src/app/cn3d/cn3d_app.cpp
1414 --- ncbisrc/src/app/cn3d/cn3d_app.cpp 2008-06-10 09:53:25.000000000 -0700
1415 +++ ncbisrc2/src/app/cn3d/cn3d_app.cpp 2009-03-30 08:16:45.433937756 -0700
1416 @@ -47,6 +47,8 @@
1417 #include <algorithm>
1418 #include <vector>
1419
1420 +#include <string.h>
1421 +
1422 #include "remove_header_conflicts.hpp"
1423
1424 #ifdef __WXMSW__
1425 Only in ncbisrc2/src/app/cn3d: cn3d_app.cpp~
1426 diff -ur ncbisrc/src/app/cn3d/cn3d_blast.hpp ncbisrc2/src/app/cn3d/cn3d_blast.hpp
1427 --- ncbisrc/src/app/cn3d/cn3d_blast.hpp 2007-05-04 10:18:18.000000000 -0700
1428 +++ ncbisrc2/src/app/cn3d/cn3d_blast.hpp 2009-03-30 08:17:02.517686306 -0700
1429 @@ -37,7 +37,7 @@
1430 #include <corelib/ncbistd.hpp>
1431
1432 #include <list>
1433 -
1434 +#include <string.h>
1435
1436 BEGIN_SCOPE(Cn3D)
1437
1438 Only in ncbisrc2/src/app/cn3d: cn3d_blast.hpp~
1439 diff -ur ncbisrc/src/app/cn3d/cn3d_png.cpp ncbisrc2/src/app/cn3d/cn3d_png.cpp
1440 --- ncbisrc/src/app/cn3d/cn3d_png.cpp 2007-05-04 10:18:18.000000000 -0700
1441 +++ ncbisrc2/src/app/cn3d/cn3d_png.cpp 2009-03-30 08:22:11.254066092 -0700
1442 @@ -56,6 +56,7 @@
1443 #endif
1444
1445 #include <png.h>
1446 +#include <string.h>
1447
1448 #include "remove_header_conflicts.hpp"
1449
1450 Only in ncbisrc2/src/app/cn3d: cn3d_png.cpp~
1451 diff -ur ncbisrc/src/app/cn3d/cn3d_threader.cpp ncbisrc2/src/app/cn3d/cn3d_threader.cpp
1452 --- ncbisrc/src/app/cn3d/cn3d_threader.cpp 2007-05-04 10:18:18.000000000 -0700
1453 +++ ncbisrc2/src/app/cn3d/cn3d_threader.cpp 2009-03-30 08:20:04.443928924 -0700
1454 @@ -36,6 +36,7 @@
1455 #include <corelib/ncbistl.hpp>
1456
1457 #include <memory>
1458 +#include <string.h>
1459
1460 #include <objects/scoremat/scoremat__.hpp>
1461
1462 Only in ncbisrc2/src/app/cn3d: cn3d_threader.cpp~
1463 diff -ur ncbisrc/src/app/cn3d/cn3d_tools.cpp ncbisrc2/src/app/cn3d/cn3d_tools.cpp
1464 --- ncbisrc/src/app/cn3d/cn3d_tools.cpp 2008-05-28 08:23:58.000000000 -0700
1465 +++ ncbisrc2/src/app/cn3d/cn3d_tools.cpp 2009-03-30 08:18:04.887451609 -0700
1466 @@ -32,6 +32,7 @@
1467 */
1468 #include <ncbi_pch.hpp>
1469 #include <corelib/ncbistd.hpp>
1470 +#include <string.h>
1471
1472 #if defined(__WXMSW__)
1473 #include <windows.h>
1474 Only in ncbisrc2/src/app/cn3d: cn3d_tools.cpp~
1475 diff -ur ncbisrc/src/app/cn3d/data_manager.cpp ncbisrc2/src/app/cn3d/data_manager.cpp
1476 --- ncbisrc/src/app/cn3d/data_manager.cpp 2008-04-01 12:42:38.000000000 -0700
1477 +++ ncbisrc2/src/app/cn3d/data_manager.cpp 2009-03-30 08:20:52.598330836 -0700
1478 @@ -63,6 +63,8 @@
1479
1480 #include <algo/structure/cd_utils/cuCD.hpp>
1481
1482 +#include <string.h>
1483 +
1484 USING_NCBI_SCOPE;
1485 USING_SCOPE(objects);
1486
1487 Only in ncbisrc2/src/app/cn3d: data_manager.cpp~
1488 diff -ur ncbisrc/src/app/cn3d/file_messaging.cpp ncbisrc2/src/app/cn3d/file_messaging.cpp
1489 --- ncbisrc/src/app/cn3d/file_messaging.cpp 2007-05-04 10:18:18.000000000 -0700
1490 +++ ncbisrc2/src/app/cn3d/file_messaging.cpp 2009-03-30 08:18:45.320831236 -0700
1491 @@ -42,6 +42,7 @@
1492 #include <serial/objistr.hpp>
1493
1494 #include <memory>
1495 +#include <string.h>
1496
1497 #include "file_messaging.hpp"
1498
1499 Only in ncbisrc2/src/app/cn3d: file_messaging.cpp~
1500 diff -ur ncbisrc/src/app/cn3d/messenger.cpp ncbisrc2/src/app/cn3d/messenger.cpp
1501 --- ncbisrc/src/app/cn3d/messenger.cpp 2007-05-31 13:08:39.000000000 -0700
1502 +++ ncbisrc2/src/app/cn3d/messenger.cpp 2009-03-30 08:21:27.723920201 -0700
1503 @@ -36,6 +36,7 @@
1504 #include <corelib/ncbistd.hpp>
1505
1506 #include <memory>
1507 +#include <string.h>
1508
1509 #include <objects/mmdb1/Biostruc_id.hpp>
1510 #include <objects/mmdb1/Mmdb_id.hpp>
1511 Only in ncbisrc2/src/app/cn3d: messenger.cpp~
1512 diff -ur ncbisrc/src/app/cn3d/molecule.cpp ncbisrc2/src/app/cn3d/molecule.cpp
1513 --- ncbisrc/src/app/cn3d/molecule.cpp 2007-05-04 10:18:18.000000000 -0700
1514 +++ ncbisrc2/src/app/cn3d/molecule.cpp 2009-03-30 08:17:46.317274989 -0700
1515 @@ -45,6 +45,7 @@
1516 #include "remove_header_conflicts.hpp"
1517
1518 #include "molecule.hpp"
1519 +#include <string.h>
1520 #include "residue.hpp"
1521 #include "bond.hpp"
1522 #include "style_manager.hpp"
1523 Only in ncbisrc2/src/app/cn3d: molecule.cpp~
1524 diff -ur ncbisrc/src/app/cn3d/molecule_identifier.cpp ncbisrc2/src/app/cn3d/molecule_identifier.cpp
1525 --- ncbisrc/src/app/cn3d/molecule_identifier.cpp 2007-05-31 13:08:39.000000000 -0700
1526 +++ ncbisrc2/src/app/cn3d/molecule_identifier.cpp 2009-03-30 08:17:29.203943289 -0700
1527 @@ -50,6 +50,8 @@
1528 #include "sequence_set.hpp"
1529 #include "cn3d_tools.hpp"
1530
1531 +#include <string.h>
1532 +
1533 USING_NCBI_SCOPE;
1534
1535
1536 Only in ncbisrc2/src/app/cn3d: molecule_identifier.cpp~
1537 diff -ur ncbisrc/src/app/cn3d/nowin_main.cpp ncbisrc2/src/app/cn3d/nowin_main.cpp
1538 --- ncbisrc/src/app/cn3d/nowin_main.cpp 2007-05-04 10:18:18.000000000 -0700
1539 +++ ncbisrc2/src/app/cn3d/nowin_main.cpp 2009-03-30 08:19:25.290602233 -0700
1540 @@ -31,6 +31,7 @@
1541 * ===========================================================================
1542 */
1543
1544 +#include <string.h>
1545 #include <ncbi_pch.hpp>
1546 #include <corelib/ncbistd.hpp>
1547 #include <corelib/ncbitime.hpp> // avoids some 'CurrentTime' conflict later on...
1548 Only in ncbisrc2/src/app/cn3d: nowin_main.cpp~
1549 diff -ur ncbisrc/src/app/cn3d/residue.cpp ncbisrc2/src/app/cn3d/residue.cpp
1550 --- ncbisrc/src/app/cn3d/residue.cpp 2007-05-04 10:18:18.000000000 -0700
1551 +++ ncbisrc2/src/app/cn3d/residue.cpp 2009-03-30 08:19:43.721847223 -0700
1552 @@ -31,6 +31,7 @@
1553 * ===========================================================================
1554 */
1555
1556 +#include <string.h>
1557 #include <ncbi_pch.hpp>
1558 #include <corelib/ncbistd.hpp>
1559
1560 Only in ncbisrc2/src/app/cn3d: residue.cpp~
1561 diff -ur ncbisrc/src/app/cn3d/sequence_set.cpp ncbisrc2/src/app/cn3d/sequence_set.cpp
1562 --- ncbisrc/src/app/cn3d/sequence_set.cpp 2007-05-04 10:18:18.000000000 -0700
1563 +++ ncbisrc2/src/app/cn3d/sequence_set.cpp 2009-03-30 08:19:06.090591590 -0700
1564 @@ -31,6 +31,7 @@
1565 * ===========================================================================
1566 */
1567
1568 +#include <string.h>
1569 #include <ncbi_pch.hpp>
1570 #include <corelib/ncbistd.hpp>
1571 #include <corelib/ncbistre.hpp>
1572 Only in ncbisrc2/src/app/cn3d: sequence_set.cpp~
1573 diff -ur ncbisrc/src/app/cn3d/sequence_viewer.cpp ncbisrc2/src/app/cn3d/sequence_viewer.cpp
1574 --- ncbisrc/src/app/cn3d/sequence_viewer.cpp 2008-05-28 08:19:45.000000000 -0700
1575 +++ ncbisrc2/src/app/cn3d/sequence_viewer.cpp 2009-03-30 08:21:46.573931358 -0700
1576 @@ -35,6 +35,7 @@
1577 #include <corelib/ncbistd.hpp>
1578
1579 #include <memory>
1580 +#include <string.h>
1581
1582 #include <objects/seq/Bioseq.hpp>
1583
1584 Only in ncbisrc2/src/app/cn3d: sequence_viewer.cpp~
1585 diff -ur ncbisrc/src/app/cn3d/show_hide_manager.cpp ncbisrc2/src/app/cn3d/show_hide_manager.cpp
1586 --- ncbisrc/src/app/cn3d/show_hide_manager.cpp 2007-08-24 05:16:08.000000000 -0700
1587 +++ ncbisrc2/src/app/cn3d/show_hide_manager.cpp 2009-03-30 08:20:22.745091275 -0700
1588 @@ -33,6 +33,7 @@
1589
1590 #include <ncbi_pch.hpp>
1591 #include <corelib/ncbistd.hpp>
1592 +#include <string.h>
1593
1594 #include "remove_header_conflicts.hpp"
1595
1596 Only in ncbisrc2/src/app/cn3d: show_hide_manager.cpp~
1597 diff -ur ncbisrc/src/app/cn3d/structure_set.cpp ncbisrc2/src/app/cn3d/structure_set.cpp
1598 --- ncbisrc/src/app/cn3d/structure_set.cpp 2008-04-28 10:42:50.000000000 -0700
1599 +++ ncbisrc2/src/app/cn3d/structure_set.cpp 2009-03-30 08:21:11.237551492 -0700
1600 @@ -38,6 +38,7 @@
1601 #include <corelib/ncbistl.hpp>
1602
1603 #include <deque>
1604 +#include <string.h>
1605
1606 #include <objects/ncbimime/Biostruc_seq.hpp>
1607 #include <objects/ncbimime/Biostruc_seqs.hpp>
1608 Only in ncbisrc2/src/app/cn3d: structure_set.cpp~
1609 diff -ur ncbisrc/src/app/cn3d/update_viewer.cpp ncbisrc2/src/app/cn3d/update_viewer.cpp
1610 --- ncbisrc/src/app/cn3d/update_viewer.cpp 2007-11-26 16:23:06.000000000 -0800
1611 +++ ncbisrc2/src/app/cn3d/update_viewer.cpp 2009-03-30 08:18:25.137261389 -0700
1612 @@ -31,6 +31,7 @@
1613 * ===========================================================================
1614 */
1615
1616 +#include <string.h>
1617 #include <ncbi_pch.hpp>
1618 #include <corelib/ncbistd.hpp>
1619 #include <corelib/ncbistl.hpp>
1620 Only in ncbisrc2/src/app/cn3d: update_viewer.cpp~
1621 diff -ur ncbisrc/src/app/id1_fetch/id1_fetch.cpp ncbisrc2/src/app/id1_fetch/id1_fetch.cpp
1622 --- ncbisrc/src/app/id1_fetch/id1_fetch.cpp 2008-05-08 08:27:40.000000000 -0700
1623 +++ ncbisrc2/src/app/id1_fetch/id1_fetch.cpp 2009-03-30 08:48:45.647089262 -0700
1624 @@ -80,7 +80,7 @@
1625
1626 #include <memory>
1627 #include <algorithm>
1628 -
1629 +#include <string.h>
1630
1631 BEGIN_NCBI_SCOPE
1632 USING_SCOPE(NCBI_NS_NCBI::objects); // MSVC requires qualification (!)
1633 Only in ncbisrc2/src/app/id1_fetch: id1_fetch.cpp~
1634 diff -ur ncbisrc/src/app/id1_fetch/id1_fetch_simple.cpp ncbisrc2/src/app/id1_fetch/id1_fetch_simple.cpp
1635 --- ncbisrc/src/app/id1_fetch/id1_fetch_simple.cpp 2007-05-04 10:18:18.000000000 -0700
1636 +++ ncbisrc2/src/app/id1_fetch/id1_fetch_simple.cpp 2009-03-30 08:50:36.153744921 -0700
1637 @@ -51,7 +51,7 @@
1638 #include <objects/seqset/Seq_entry.hpp>
1639
1640 #include <memory>
1641 -
1642 +#include <string.h>
1643
1644 USING_NCBI_SCOPE;
1645 USING_SCOPE(objects);
1646 Only in ncbisrc2/src/app/id1_fetch: id1_fetch_simple.cpp~
1647 diff -ur ncbisrc/src/app/id2_fetch/id2_fetch_simple.cpp ncbisrc2/src/app/id2_fetch/id2_fetch_simple.cpp
1648 --- ncbisrc/src/app/id2_fetch/id2_fetch_simple.cpp 2008-06-05 09:28:43.000000000 -0700
1649 +++ ncbisrc2/src/app/id2_fetch/id2_fetch_simple.cpp 2009-03-30 08:23:52.103905181 -0700
1650 @@ -65,6 +65,8 @@
1651 #include <util/compress/zlib.hpp>
1652 #include <corelib/rwstream.hpp>
1653
1654 +#include <string.h>
1655 +
1656 USING_NCBI_SCOPE;
1657 USING_SCOPE(objects);
1658
1659 Only in ncbisrc2/src/app/id2_fetch: id2_fetch_simple.cpp~
1660 diff -ur ncbisrc/src/app/netbvstore/netbvstore.cpp ncbisrc2/src/app/netbvstore/netbvstore.cpp
1661 --- ncbisrc/src/app/netbvstore/netbvstore.cpp 2007-06-20 13:02:49.000000000 -0700
1662 +++ ncbisrc2/src/app/netbvstore/netbvstore.cpp 2009-03-30 08:53:46.193715582 -0700
1663 @@ -45,7 +45,7 @@
1664 #include <connect/services/netservice_api_expt.hpp>
1665
1666 #include <util/thread_nonstop.hpp>
1667 -
1668 +#include <string.h>
1669
1670 #if defined(NCBI_OS_UNIX)
1671 # include <corelib/ncbi_os_unix.hpp>
1672 Only in ncbisrc2/src/app/netbvstore: netbvstore.cpp~
1673 diff -ur ncbisrc/src/app/netcache/message_handler.cpp ncbisrc2/src/app/netcache/message_handler.cpp
1674 --- ncbisrc/src/app/netcache/message_handler.cpp 2008-09-16 07:27:23.000000000 -0700
1675 +++ ncbisrc2/src/app/netcache/message_handler.cpp 2009-03-30 08:36:50.503828174 -0700
1676 @@ -31,7 +31,7 @@
1677 #include <ncbi_pch.hpp>
1678 #include <corelib/ncbi_param.hpp>
1679 #include <corelib/request_ctx.hpp>
1680 -
1681 +#include <string.h>
1682 #include "message_handler.hpp"
1683 #include "nc_handler.hpp"
1684 #include "ic_handler.hpp"
1685 Only in ncbisrc2/src/app/netcache: message_handler.cpp~
1686 diff -ur ncbisrc/src/app/netcache/netcache_check.cpp ncbisrc2/src/app/netcache/netcache_check.cpp
1687 --- ncbisrc/src/app/netcache/netcache_check.cpp 2008-04-16 11:54:04.000000000 -0700
1688 +++ ncbisrc2/src/app/netcache/netcache_check.cpp 2009-03-30 08:37:03.290492741 -0700
1689 @@ -28,7 +28,7 @@
1690 * File Description: Check NetCache service (functionality).
1691 *
1692 */
1693 -
1694 +#include <string.h>
1695 #include <ncbi_pch.hpp>
1696 #include <corelib/ncbistl.hpp>
1697 #include <corelib/ncbiapp.hpp>
1698 Only in ncbisrc2/src/app/netcache: netcache_check.cpp~
1699 diff -ur ncbisrc/src/app/netschedule/grid_mgr/mgrlogic.cpp ncbisrc2/src/app/netschedule/grid_mgr/mgrlogic.cpp
1700 --- ncbisrc/src/app/netschedule/grid_mgr/mgrlogic.cpp 2007-05-04 10:18:18.000000000 -0700
1701 +++ ncbisrc2/src/app/netschedule/grid_mgr/mgrlogic.cpp 2009-03-30 08:40:32.637139021 -0700
1702 @@ -37,6 +37,7 @@
1703 #include <connect/services/netcache_client.hpp>
1704 #include <connect/ncbi_conn_stream.hpp>
1705
1706 +#include <string.h>
1707 #include <functional>
1708 #include <algorithm>
1709
1710 Only in ncbisrc2/src/app/netschedule/grid_mgr: mgrlogic.cpp~
1711 diff -ur ncbisrc/src/app/netschedule/netschedule_check.cpp ncbisrc2/src/app/netschedule/netschedule_check.cpp
1712 --- ncbisrc/src/app/netschedule/netschedule_check.cpp 2008-05-29 18:26:33.000000000 -0700
1713 +++ ncbisrc2/src/app/netschedule/netschedule_check.cpp 2009-03-30 08:42:47.360455582 -0700
1714 @@ -43,7 +43,7 @@
1715 #include <common/ncbi_package_ver.h>
1716
1717 #include <common/test_assert.h> /* This header must go last */
1718 -
1719 +#include <string.h>
1720
1721 USING_NCBI_SCOPE;
1722
1723 Only in ncbisrc2/src/app/netschedule: netschedule_check.cpp~
1724 diff -ur ncbisrc/src/app/netschedule/netscheduled.cpp ncbisrc2/src/app/netschedule/netscheduled.cpp
1725 --- ncbisrc/src/app/netschedule/netscheduled.cpp 2008-09-18 11:36:51.000000000 -0700
1726 +++ ncbisrc2/src/app/netschedule/netscheduled.cpp 2009-03-30 08:41:00.417553059 -0700
1727 @@ -31,6 +31,7 @@
1728
1729 #include <ncbi_pch.hpp>
1730 #include <stdio.h>
1731 +#include <string.h>
1732 #include <corelib/ncbiapp.hpp>
1733 #include <corelib/ncbienv.hpp>
1734 #include <corelib/ncbireg.hpp>
1735 Only in ncbisrc2/src/app/netschedule: netscheduled.cpp~
1736 diff -ur ncbisrc/src/app/netschedule/squeue.hpp ncbisrc2/src/app/netschedule/squeue.hpp
1737 --- ncbisrc/src/app/netschedule/squeue.hpp 2008-12-20 14:56:44.000000000 -0800
1738 +++ ncbisrc2/src/app/netschedule/squeue.hpp 2009-03-30 08:42:26.057544156 -0700
1739 @@ -54,6 +54,7 @@
1740
1741 #include <deque>
1742 #include <map>
1743 +#include <string.h>
1744
1745 BEGIN_NCBI_SCOPE
1746
1747 Only in ncbisrc2/src/app/netschedule: squeue.hpp~
1748 diff -ur ncbisrc/src/app/netschedule/test/test_netschedule_data.hpp ncbisrc2/src/app/netschedule/test/test_netschedule_data.hpp
1749 --- ncbisrc/src/app/netschedule/test/test_netschedule_data.hpp 2008-02-25 15:59:39.000000000 -0800
1750 +++ ncbisrc2/src/app/netschedule/test/test_netschedule_data.hpp 2009-03-30 08:41:20.207247014 -0700
1751 @@ -32,6 +32,8 @@
1752 *
1753 */
1754
1755 +#include <string.h>
1756 +
1757 static const char output_buffer_seed[] =
1758 "AZBYCXDWEVFUGTHSIRJQKPLOMNNMOLPKQJRISHTGUFVEWDXCYB\n"
1759 "ZAYBXCWDVEUFTGSHRIQJPKOLNMMNLOKPJQIRHSGTFUEVDWCXBY\n";
1760 Only in ncbisrc2/src/app/netschedule/test: test_netschedule_data.hpp~
1761 diff -ur ncbisrc/src/app/objmgr/demo/objmgr_demo.cpp ncbisrc2/src/app/objmgr/demo/objmgr_demo.cpp
1762 --- ncbisrc/src/app/objmgr/demo/objmgr_demo.cpp 2008-07-17 11:04:09.000000000 -0700
1763 +++ ncbisrc2/src/app/objmgr/demo/objmgr_demo.cpp 2009-03-30 08:22:35.870580014 -0700
1764 @@ -31,6 +31,8 @@
1765 * ===========================================================================
1766 */
1767
1768 +#include <string.h>
1769 +
1770 #include <ncbi_pch.hpp>
1771 #include <corelib/ncbistd.hpp>
1772 #include <corelib/ncbiapp.hpp>
1773 Only in ncbisrc2/src/app/objmgr/demo: objmgr_demo.cpp~
1774 diff -ur ncbisrc/src/app/oligofar/capp.cpp ncbisrc2/src/app/oligofar/capp.cpp
1775 --- ncbisrc/src/app/oligofar/capp.cpp 2008-09-04 08:44:39.000000000 -0700
1776 +++ ncbisrc2/src/app/oligofar/capp.cpp 2009-03-30 08:51:04.817065678 -0700
1777 @@ -7,7 +7,7 @@
1778 #define EX_USAGE 64
1779 #endif
1780 #include <iostream>
1781 -
1782 +#include <string.h>
1783 USING_OLIGOFAR_SCOPES;
1784
1785 CApp::CApp( int argc, char ** argv ) :
1786 Only in ncbisrc2/src/app/oligofar: capp.cpp~
1787 diff -ur ncbisrc/src/app/oligofar/cguidefile.hpp ncbisrc2/src/app/oligofar/cguidefile.hpp
1788 --- ncbisrc/src/app/oligofar/cguidefile.hpp 2008-09-03 13:40:16.000000000 -0700
1789 +++ ncbisrc2/src/app/oligofar/cguidefile.hpp 2009-03-30 08:51:16.697074721 -0700
1790 @@ -3,7 +3,7 @@
1791
1792 #include "defs.hpp"
1793 #include "cfilter.hpp"
1794 -
1795 +#include <string.h>
1796 BEGIN_OLIGOFAR_SCOPES
1797
1798 /* ************************************************************************
1799 Only in ncbisrc2/src/app/oligofar: cguidefile.hpp~
1800 diff -ur ncbisrc/src/app/oligofar/coligofarapp.cpp ncbisrc2/src/app/oligofar/coligofarapp.cpp
1801 --- ncbisrc/src/app/oligofar/coligofarapp.cpp 2008-09-17 11:51:11.000000000 -0700
1802 +++ ncbisrc2/src/app/oligofar/coligofarapp.cpp 2009-03-30 08:51:33.613739525 -0700
1803 @@ -15,7 +15,7 @@
1804 #include <iomanip>
1805 #include <fstream>
1806 #include <sstream>
1807 -
1808 +#include <string.h>
1809 #ifndef _WIN32
1810 #include <sys/resource.h>
1811 #else
1812 Only in ncbisrc2/src/app/oligofar: coligofarapp.cpp~
1813 diff -ur ncbisrc/src/app/oligofar/cquery.hpp ncbisrc2/src/app/oligofar/cquery.hpp
1814 --- ncbisrc/src/app/oligofar/cquery.hpp 2008-09-03 13:40:16.000000000 -0700
1815 +++ ncbisrc2/src/app/oligofar/cquery.hpp 2009-03-30 08:53:23.763759048 -0700
1816 @@ -5,7 +5,7 @@
1817 #include "cseqcoding.hpp"
1818 #include "debug.hpp"
1819 #include "chit.hpp"
1820 -
1821 +#include <string.h>
1822 BEGIN_OLIGOFAR_SCOPES
1823
1824 class CHit;
1825 Only in ncbisrc2/src/app/oligofar: cquery.hpp~
1826 diff -ur ncbisrc/src/app/oligofar/cseqcoding.hpp ncbisrc2/src/app/oligofar/cseqcoding.hpp
1827 --- ncbisrc/src/app/oligofar/cseqcoding.hpp 2008-09-16 05:42:01.000000000 -0700
1828 +++ ncbisrc2/src/app/oligofar/cseqcoding.hpp 2009-03-30 08:52:27.280400410 -0700
1829 @@ -3,7 +3,7 @@
1830
1831 #include "defs.hpp"
1832 #include <cmath>
1833 -
1834 +#include <string.h>
1835 BEGIN_OLIGOFAR_SCOPES
1836
1837 class CIupacnaBase;
1838 Only in ncbisrc2/src/app/oligofar: cseqcoding.hpp~
1839 diff -ur ncbisrc/src/app/oligofar/csnpdb.cpp ncbisrc2/src/app/oligofar/csnpdb.cpp
1840 --- ncbisrc/src/app/oligofar/csnpdb.cpp 2008-08-21 13:48:38.000000000 -0700
1841 +++ ncbisrc2/src/app/oligofar/csnpdb.cpp 2009-03-30 08:52:15.390401647 -0700
1842 @@ -1,6 +1,7 @@
1843 #include <ncbi_pch.hpp>
1844 #include "csnpdb.hpp"
1845 #include "iupac-util.hpp"
1846 +#include <string.h>
1847
1848 USING_OLIGOFAR_SCOPES;
1849
1850 Only in ncbisrc2/src/app/oligofar: csnpdb.cpp~
1851 diff -ur ncbisrc/src/app/oligofar/iupac-util.impl.hpp ncbisrc2/src/app/oligofar/iupac-util.impl.hpp
1852 --- ncbisrc/src/app/oligofar/iupac-util.impl.hpp 2008-09-03 13:40:16.000000000 -0700
1853 +++ ncbisrc2/src/app/oligofar/iupac-util.impl.hpp 2009-03-30 08:52:56.547488399 -0700
1854 @@ -2,7 +2,7 @@
1855 #define OLIGOFAR_IUPAC_UTIL__IMPL__HPP
1856
1857 #include "iupac-util.hpp"
1858 -
1859 +#include <string.h>
1860 inline string Ncbi2naToIupac( unsigned char w )
1861 {
1862 const char * acgt = "ACGT";
1863 Only in ncbisrc2/src/app/oligofar: iupac-util.impl.hpp~
1864 diff -ur ncbisrc/src/app/oligofar/string-util.hpp ncbisrc2/src/app/oligofar/string-util.hpp
1865 --- ncbisrc/src/app/oligofar/string-util.hpp 2008-08-19 18:28:26.000000000 -0700
1866 +++ ncbisrc2/src/app/oligofar/string-util.hpp 2009-03-30 08:52:41.270399482 -0700
1867 @@ -4,7 +4,7 @@
1868
1869 #include "defs.hpp"
1870 #include <cstring>
1871 -#include <string>
1872 +#include <string.h>
1873
1874 BEGIN_OLIGOFAR_SCOPES
1875
1876 Only in ncbisrc2/src/app/oligofar: string-util.hpp~
1877 diff -ur ncbisrc/src/app/read_blast_result/fit_blast.cpp ncbisrc2/src/app/read_blast_result/fit_blast.cpp
1878 --- ncbisrc/src/app/read_blast_result/fit_blast.cpp 2008-01-24 13:31:19.000000000 -0800
1879 +++ ncbisrc2/src/app/read_blast_result/fit_blast.cpp 2009-03-30 08:38:43.050657326 -0700
1880 @@ -29,6 +29,8 @@
1881 *
1882 * ===========================================================================
1883 */
1884 +
1885 +#include <string.h>
1886 #include <ncbi_pch.hpp>
1887 #include "read_blast_result.hpp"
1888
1889 Only in ncbisrc2/src/app/read_blast_result: fit_blast.cpp~
1890 diff -ur ncbisrc/src/app/read_blast_result/match.cpp ncbisrc2/src/app/read_blast_result/match.cpp
1891 --- ncbisrc/src/app/read_blast_result/match.cpp 2008-06-24 13:05:20.000000000 -0700
1892 +++ ncbisrc2/src/app/read_blast_result/match.cpp 2009-03-30 08:38:56.531167311 -0700
1893 @@ -31,8 +31,7 @@
1894 */
1895 #include <ncbi_pch.hpp>
1896 #include "read_blast_result.hpp"
1897 -
1898 -
1899 +#include <string.h>
1900
1901 bool CReadBlastApp::match_na
1902 (
1903 Only in ncbisrc2/src/app/read_blast_result: match.cpp~
1904 diff -ur ncbisrc/src/app/read_blast_result/missing.cpp ncbisrc2/src/app/read_blast_result/missing.cpp
1905 --- ncbisrc/src/app/read_blast_result/missing.cpp 2008-06-24 13:05:20.000000000 -0700
1906 +++ ncbisrc2/src/app/read_blast_result/missing.cpp 2009-03-30 08:39:32.770779625 -0700
1907 @@ -31,6 +31,7 @@
1908 */
1909 #include <ncbi_pch.hpp>
1910 #include "read_blast_result.hpp"
1911 +#include <string.h>
1912
1913 // internal functions
1914
1915 Only in ncbisrc2/src/app/read_blast_result: missing.cpp~
1916 diff -ur ncbisrc/src/app/read_blast_result/problems.cpp ncbisrc2/src/app/read_blast_result/problems.cpp
1917 --- ncbisrc/src/app/read_blast_result/problems.cpp 2008-06-24 13:05:20.000000000 -0700
1918 +++ ncbisrc2/src/app/read_blast_result/problems.cpp 2009-03-30 08:39:19.660476090 -0700
1919 @@ -31,7 +31,7 @@
1920 */
1921 #include <ncbi_pch.hpp>
1922 #include "read_blast_result.hpp"
1923 -
1924 +#include <string.h>
1925
1926 void CReadBlastApp::reportProblems(const bool report_and_forget, diagMap& diag, ostream& out,
1927 const CBioseq::TAnnot& annots, const EProblem type)
1928 Only in ncbisrc2/src/app/read_blast_result: problems.cpp~
1929 diff -ur ncbisrc/src/app/read_blast_result/read_rrna.cpp ncbisrc2/src/app/read_blast_result/read_rrna.cpp
1930 --- ncbisrc/src/app/read_blast_result/read_rrna.cpp 2008-06-24 13:05:20.000000000 -0700
1931 +++ ncbisrc2/src/app/read_blast_result/read_rrna.cpp 2009-03-30 08:37:44.203821829 -0700
1932 @@ -31,6 +31,7 @@
1933 */
1934 #include <ncbi_pch.hpp>
1935 #include "read_blast_result.hpp"
1936 +#include <string.h>
1937
1938 int CReadBlastApp::ReadRRNA2(const string& file)
1939 {
1940 Only in ncbisrc2/src/app/read_blast_result: read_rrna.cpp~
1941 diff -ur ncbisrc/src/app/read_blast_result/read_trna.cpp ncbisrc2/src/app/read_blast_result/read_trna.cpp
1942 --- ncbisrc/src/app/read_blast_result/read_trna.cpp 2008-06-24 13:05:20.000000000 -0700
1943 +++ ncbisrc2/src/app/read_blast_result/read_trna.cpp 2009-03-30 08:37:57.307384404 -0700
1944 @@ -31,6 +31,7 @@
1945 */
1946 #include <ncbi_pch.hpp>
1947 #include "read_blast_result.hpp"
1948 +#include <string.h>
1949
1950 int CReadBlastApp::ReadTRNA(const string& file)
1951 {
1952 Only in ncbisrc2/src/app/read_blast_result: read_trna.cpp~
1953 diff -ur ncbisrc/src/app/read_blast_result/tbl.cpp ncbisrc2/src/app/read_blast_result/tbl.cpp
1954 --- ncbisrc/src/app/read_blast_result/tbl.cpp 2008-09-08 09:03:44.000000000 -0700
1955 +++ ncbisrc2/src/app/read_blast_result/tbl.cpp 2009-03-30 08:38:26.857151245 -0700
1956 @@ -34,7 +34,7 @@
1957 #include <ncbi_pch.hpp>
1958 #include <corelib/ncbienv.hpp>
1959 #include "tbl.hpp"
1960 -
1961 +#include <string.h>
1962
1963
1964 bool Ctbl::Read(istream& in)
1965 Only in ncbisrc2/src/app/read_blast_result: tbl.cpp~
1966 diff -ur ncbisrc/src/app/sample/cgi/cgi_session_sample.cpp ncbisrc2/src/app/sample/cgi/cgi_session_sample.cpp
1967 --- ncbisrc/src/app/sample/cgi/cgi_session_sample.cpp 2007-05-04 10:18:18.000000000 -0700
1968 +++ ncbisrc2/src/app/sample/cgi/cgi_session_sample.cpp 2009-03-30 08:15:18.517310174 -0700
1969 @@ -33,7 +33,7 @@
1970 #include <cgi/cgiapp.hpp>
1971 #include <cgi/cgictx.hpp>
1972 #include <html/html.hpp>
1973 -
1974 +#include <string.h>
1975 #include <misc/grid_cgi/cgi_session_netcache.hpp>
1976
1977
1978 Only in ncbisrc2/src/app/sample/cgi: cgi_session_sample.cpp~
1979 diff -ur ncbisrc/src/app/sample/netcache/netcache_client_sample1.cpp ncbisrc2/src/app/sample/netcache/netcache_client_sample1.cpp
1980 --- ncbisrc/src/app/sample/netcache/netcache_client_sample1.cpp 2008-02-26 09:31:23.000000000 -0800
1981 +++ ncbisrc2/src/app/sample/netcache/netcache_client_sample1.cpp 2009-03-30 08:16:21.303971182 -0700
1982 @@ -46,6 +46,8 @@
1983 #include <connect/services/netcache_api.hpp>
1984 #include <util/simple_buffer.hpp>
1985
1986 +#include <string.h>
1987 +
1988
1989 USING_NCBI_SCOPE;
1990
1991 Only in ncbisrc2/src/app/sample/netcache: netcache_client_sample1.cpp~
1992 diff -ur ncbisrc/src/app/sample/objmgr/bioseq_edit_sample.cpp ncbisrc2/src/app/sample/objmgr/bioseq_edit_sample.cpp
1993 --- ncbisrc/src/app/sample/objmgr/bioseq_edit_sample.cpp 2007-05-04 10:18:18.000000000 -0700
1994 +++ ncbisrc2/src/app/sample/objmgr/bioseq_edit_sample.cpp 2009-03-30 08:15:44.390621693 -0700
1995 @@ -36,6 +36,8 @@
1996 #include <corelib/ncbiargs.hpp>
1997 #include <connect/ncbi_core_cxx.hpp>
1998
1999 +#include <string.h>
2000 +
2001 #include <serial/objostr.hpp>
2002 #include <serial/objistr.hpp>
2003 #include <serial/serial.hpp>
2004 Only in ncbisrc2/src/app/sample/objmgr: bioseq_edit_sample.cpp~
2005 diff -ur ncbisrc/src/app/sample/objmgr/file_db_engine.cpp ncbisrc2/src/app/sample/objmgr/file_db_engine.cpp
2006 --- ncbisrc/src/app/sample/objmgr/file_db_engine.cpp 2007-05-04 10:18:18.000000000 -0700
2007 +++ ncbisrc2/src/app/sample/objmgr/file_db_engine.cpp 2009-03-30 08:15:59.034334134 -0700
2008 @@ -42,6 +42,8 @@
2009 #include "map_rw_helper.hpp"
2010 #include "file_db_engine.hpp"
2011
2012 +#include <string.h>
2013 +
2014 BEGIN_NCBI_SCOPE
2015
2016 template<>
2017 Only in ncbisrc2/src/app/sample/objmgr: file_db_engine.cpp~
2018 diff -ur ncbisrc/src/app/split_cache/split_cache.cpp ncbisrc2/src/app/split_cache/split_cache.cpp
2019 --- ncbisrc/src/app/split_cache/split_cache.cpp 2008-07-28 11:12:28.000000000 -0700
2020 +++ ncbisrc2/src/app/split_cache/split_cache.cpp 2009-03-30 08:36:05.971443297 -0700
2021 @@ -97,6 +97,8 @@
2022 #include <objmgr/split/blob_splitter.hpp>
2023 #include <objmgr/split/id2_compress.hpp>
2024
2025 +#include <string.h>
2026 +
2027
2028 #define NCBI_USE_ERRCODE_X Objtools_SplitCache
2029
2030 Only in ncbisrc2/src/app/split_cache: split_cache.cpp~
2031 diff -ur ncbisrc/src/app/winmasker/win_mask_dup_table.cpp ncbisrc2/src/app/winmasker/win_mask_dup_table.cpp
2032 --- ncbisrc/src/app/winmasker/win_mask_dup_table.cpp 2007-11-26 08:22:45.000000000 -0800
2033 +++ ncbisrc2/src/app/winmasker/win_mask_dup_table.cpp 2009-03-30 08:37:23.893834365 -0700
2034 @@ -32,7 +32,7 @@
2035
2036 #include <ncbi_pch.hpp>
2037 #include <vector>
2038 -#include <string>
2039 +#include <string.h>
2040 #include <map>
2041
2042 #include <corelib/ncbitype.h>
2043 Only in ncbisrc2/src/app/winmasker: win_mask_dup_table.cpp~
2044 diff -ur ncbisrc/src/bdb/bdb_blob.cpp ncbisrc2/src/bdb/bdb_blob.cpp
2045 --- ncbisrc/src/bdb/bdb_blob.cpp 2007-05-04 10:18:18.000000000 -0700
2046 +++ ncbisrc2/src/bdb/bdb_blob.cpp 2009-03-30 09:17:24.651592479 -0700
2047 @@ -1,3 +1,4 @@
2048 +#include <string.h>
2049 /* $Id: bdb_blob.cpp 103491 2007-05-04 17:18:18Z kazimird $
2050 * ===========================================================================
2051 *
2052 diff -ur ncbisrc/src/bdb/bdb_blobcache.cpp ncbisrc2/src/bdb/bdb_blobcache.cpp
2053 --- ncbisrc/src/bdb/bdb_blobcache.cpp 2008-09-18 11:38:35.000000000 -0700
2054 +++ ncbisrc2/src/bdb/bdb_blobcache.cpp 2009-03-30 09:17:24.664823773 -0700
2055 @@ -1,3 +1,4 @@
2056 +#include <string.h>
2057 /* $Id: bdb_blobcache.cpp 140611 2008-09-18 18:38:35Z ivanovp $
2058 * ===========================================================================
2059 *
2060 diff -ur ncbisrc/src/bdb/bdb_env.cpp ncbisrc2/src/bdb/bdb_env.cpp
2061 --- ncbisrc/src/bdb/bdb_env.cpp 2008-07-09 18:21:48.000000000 -0700
2062 +++ ncbisrc2/src/bdb/bdb_env.cpp 2009-03-30 09:17:24.684845052 -0700
2063 @@ -1,3 +1,4 @@
2064 +#include <string.h>
2065 /* $Id: bdb_env.cpp 133416 2008-07-10 01:21:48Z dicuccio $
2066 * ===========================================================================
2067 *
2068 diff -ur ncbisrc/src/bdb/bdb_expt.cpp ncbisrc2/src/bdb/bdb_expt.cpp
2069 --- ncbisrc/src/bdb/bdb_expt.cpp 2007-05-04 10:18:18.000000000 -0700
2070 +++ ncbisrc2/src/bdb/bdb_expt.cpp 2009-03-30 09:17:24.668198425 -0700
2071 @@ -1,3 +1,4 @@
2072 +#include <string.h>
2073 /* $Id: bdb_expt.cpp 103491 2007-05-04 17:18:18Z kazimird $
2074 * ===========================================================================
2075 *
2076 diff -ur ncbisrc/src/bdb/bdb_ext_blob.cpp ncbisrc2/src/bdb/bdb_ext_blob.cpp
2077 --- ncbisrc/src/bdb/bdb_ext_blob.cpp 2007-06-18 05:27:53.000000000 -0700
2078 +++ ncbisrc2/src/bdb/bdb_ext_blob.cpp 2009-03-30 09:17:24.658198701 -0700
2079 @@ -1,3 +1,4 @@
2080 +#include <string.h>
2081 /* $Id: bdb_ext_blob.cpp 105812 2007-06-18 12:27:53Z dicuccio $
2082 * ===========================================================================
2083 *
2084 diff -ur ncbisrc/src/bdb/bdb_file.cpp ncbisrc2/src/bdb/bdb_file.cpp
2085 --- ncbisrc/src/bdb/bdb_file.cpp 2008-05-16 05:13:00.000000000 -0700
2086 +++ ncbisrc2/src/bdb/bdb_file.cpp 2009-03-30 09:17:24.678177903 -0700
2087 @@ -1,3 +1,4 @@
2088 +#include <string.h>
2089 /* $Id: bdb_file.cpp 127851 2008-05-16 12:13:00Z dicuccio $
2090 * ===========================================================================
2091 *
2092 diff -ur ncbisrc/src/bdb/bdb_query_bison.tab.c ncbisrc2/src/bdb/bdb_query_bison.tab.c
2093 --- ncbisrc/src/bdb/bdb_query_bison.tab.c 2004-03-23 08:37:55.000000000 -0800
2094 +++ ncbisrc2/src/bdb/bdb_query_bison.tab.c 2009-03-30 09:17:24.674864645 -0700
2095 @@ -1,3 +1,4 @@
2096 +#include <string.h>
2097 /* A Bison parser, made by GNU Bison 1.875b. */
2098
2099 /* Skeleton parser for Yacc-like parsing with Bison,
2100 diff -ur ncbisrc/src/bdb/bdb_types.cpp ncbisrc2/src/bdb/bdb_types.cpp
2101 --- ncbisrc/src/bdb/bdb_types.cpp 2008-07-09 18:14:15.000000000 -0700
2102 +++ ncbisrc2/src/bdb/bdb_types.cpp 2009-03-30 09:17:24.681490913 -0700
2103 @@ -1,3 +1,4 @@
2104 +#include <string.h>
2105 /* $Id: bdb_types.cpp 133415 2008-07-10 01:14:15Z dicuccio $
2106 * ===========================================================================
2107 *
2108 diff -ur ncbisrc/src/bdb/test/test_bdb.cpp ncbisrc2/src/bdb/test/test_bdb.cpp
2109 --- ncbisrc/src/bdb/test/test_bdb.cpp 2007-06-13 11:22:17.000000000 -0700
2110 +++ ncbisrc2/src/bdb/test/test_bdb.cpp 2009-03-30 09:17:24.661571506 -0700
2111 @@ -1,3 +1,4 @@
2112 +#include <string.h>
2113 /* $Id: test_bdb.cpp 105589 2007-06-13 18:22:17Z kuznets $
2114 * ===========================================================================
2115 *
2116 diff -ur ncbisrc/src/bdb/test_split/test_bdb_split.cpp ncbisrc2/src/bdb/test_split/test_bdb_split.cpp
2117 --- ncbisrc/src/bdb/test_split/test_bdb_split.cpp 2007-06-13 12:50:23.000000000 -0700
2118 +++ ncbisrc2/src/bdb/test_split/test_bdb_split.cpp 2009-03-30 09:17:24.691511698 -0700
2119 @@ -1,3 +1,4 @@
2120 +#include <string.h>
2121 /* $Id: test_bdb_split.cpp 105612 2007-06-13 19:50:23Z kuznets $
2122 * ===========================================================================
2123 *
2124 diff -ur ncbisrc/src/build-system/project_tree_builder/msvc_prj_utils.cpp ncbisrc2/src/build-system/project_tree_builder/msvc_prj_utils.cpp
2125 --- ncbisrc/src/build-system/project_tree_builder/msvc_prj_utils.cpp 2008-09-16 06:30:55.000000000 -0700
2126 +++ ncbisrc2/src/build-system/project_tree_builder/msvc_prj_utils.cpp 2009-03-30 09:17:24.704864606 -0700
2127 @@ -1,3 +1,4 @@
2128 +#include <string.h>
2129 /* $Id: msvc_prj_utils.cpp 140266 2008-09-16 13:30:55Z gouriano $
2130 * ===========================================================================
2131 *
2132 diff -ur ncbisrc/src/build-system/project_tree_builder/proj_builder_app.cpp ncbisrc2/src/build-system/project_tree_builder/proj_builder_app.cpp
2133 --- ncbisrc/src/build-system/project_tree_builder/proj_builder_app.cpp 2008-10-31 12:47:05.000000000 -0700
2134 +++ ncbisrc2/src/build-system/project_tree_builder/proj_builder_app.cpp 2009-03-30 09:17:24.694864540 -0700
2135 @@ -1,3 +1,4 @@
2136 +#include <string.h>
2137 /* $Id: proj_builder_app.cpp 144655 2008-10-31 19:47:05Z gouriano $
2138 * ===========================================================================
2139 *
2140 diff -ur ncbisrc/src/build-system/project_tree_builder/proj_tree_builder.cpp ncbisrc2/src/build-system/project_tree_builder/proj_tree_builder.cpp
2141 --- ncbisrc/src/build-system/project_tree_builder/proj_tree_builder.cpp 2008-10-31 12:43:43.000000000 -0700
2142 +++ ncbisrc2/src/build-system/project_tree_builder/proj_tree_builder.cpp 2009-03-30 09:17:24.701531148 -0700
2143 @@ -1,3 +1,4 @@
2144 +#include <string.h>
2145 /* $Id: proj_tree_builder.cpp 144654 2008-10-31 19:43:43Z gouriano $
2146 * ===========================================================================
2147 *
2148 diff -ur ncbisrc/src/cgi/cgi_entry_reader.cpp ncbisrc2/src/cgi/cgi_entry_reader.cpp
2149 --- ncbisrc/src/cgi/cgi_entry_reader.cpp 2008-06-05 13:41:44.000000000 -0700
2150 +++ ncbisrc2/src/cgi/cgi_entry_reader.cpp 2009-03-30 09:17:22.644509419 -0700
2151 @@ -1,3 +1,4 @@
2152 +#include <string.h>
2153 /* $Id: cgi_entry_reader.cpp 130031 2008-06-05 20:41:44Z ucko $
2154 * ===========================================================================
2155 *
2156 diff -ur ncbisrc/src/cgi/cgiapp.cpp ncbisrc2/src/cgi/cgiapp.cpp
2157 --- ncbisrc/src/cgi/cgiapp.cpp 2008-08-18 08:09:05.000000000 -0700
2158 +++ ncbisrc2/src/cgi/cgiapp.cpp 2009-03-30 09:17:22.634448002 -0700
2159 @@ -1,3 +1,4 @@
2160 +#include <string.h>
2161 /* $Id: cgiapp.cpp 137697 2008-08-18 15:09:05Z grichenk $
2162 * ===========================================================================
2163 *
2164 diff -ur ncbisrc/src/cgi/fcgi_run.cpp ncbisrc2/src/cgi/fcgi_run.cpp
2165 --- ncbisrc/src/cgi/fcgi_run.cpp 2008-08-07 13:40:49.000000000 -0700
2166 +++ ncbisrc2/src/cgi/fcgi_run.cpp 2009-03-30 09:17:22.661135016 -0700
2167 @@ -1,3 +1,4 @@
2168 +#include <string.h>
2169 /* $Id: fcgi_run.cpp 136881 2008-08-07 20:40:49Z grichenk $
2170 * ===========================================================================
2171 *
2172 diff -ur ncbisrc/src/cgi/ncbicgi.cpp ncbisrc2/src/cgi/ncbicgi.cpp
2173 --- ncbisrc/src/cgi/ncbicgi.cpp 2008-09-16 08:58:11.000000000 -0700
2174 +++ ncbisrc2/src/cgi/ncbicgi.cpp 2009-03-30 09:17:22.631135947 -0700
2175 @@ -1,3 +1,4 @@
2176 +#include <string.h>
2177 /* $Id: ncbicgi.cpp 140293 2008-09-16 15:58:11Z grichenk $
2178 * ===========================================================================
2179 *
2180 diff -ur ncbisrc/src/cgi/ncbicgir.cpp ncbisrc2/src/cgi/ncbicgir.cpp
2181 --- ncbisrc/src/cgi/ncbicgir.cpp 2007-10-15 11:28:19.000000000 -0700
2182 +++ ncbisrc2/src/cgi/ncbicgir.cpp 2009-03-30 09:17:22.641094710 -0700
2183 @@ -1,3 +1,4 @@
2184 +#include <string.h>
2185 /* $Id: ncbicgir.cpp 112285 2007-10-15 18:28:19Z ivanovp $
2186 * ===========================================================================
2187 *
2188 diff -ur ncbisrc/src/cgi/test/cgi_io_test.cpp ncbisrc2/src/cgi/test/cgi_io_test.cpp
2189 --- ncbisrc/src/cgi/test/cgi_io_test.cpp 2007-11-08 09:16:48.000000000 -0800
2190 +++ ncbisrc2/src/cgi/test/cgi_io_test.cpp 2009-03-30 09:17:22.651115382 -0700
2191 @@ -1,3 +1,4 @@
2192 +#include <string.h>
2193 /* $Id: cgi_io_test.cpp 113740 2007-11-08 17:16:48Z vakatov $
2194 * ===========================================================================
2195 *
2196 diff -ur ncbisrc/src/cgi/test/cgitest.cpp ncbisrc2/src/cgi/test/cgitest.cpp
2197 --- ncbisrc/src/cgi/test/cgitest.cpp 2008-10-01 10:49:38.000000000 -0700
2198 +++ ncbisrc2/src/cgi/test/cgitest.cpp 2009-03-30 09:17:22.657802577 -0700
2199 @@ -1,3 +1,4 @@
2200 +#include <string.h>
2201 /* $Id: cgitest.cpp 141990 2008-10-01 17:49:38Z ivanov $
2202 * ===========================================================================
2203 *
2204 diff -ur ncbisrc/src/connect/email_diag_handler.cpp ncbisrc2/src/connect/email_diag_handler.cpp
2205 --- ncbisrc/src/connect/email_diag_handler.cpp 2007-05-04 10:18:18.000000000 -0700
2206 +++ ncbisrc2/src/connect/email_diag_handler.cpp 2009-03-30 09:17:23.765006235 -0700
2207 @@ -1,3 +1,4 @@
2208 +#include <string.h>
2209 /* $Id: email_diag_handler.cpp 103491 2007-05-04 17:18:18Z kazimird $
2210 * ===========================================================================
2211 *
2212 diff -ur ncbisrc/src/connect/ncbi_ansi_ext.c ncbisrc2/src/connect/ncbi_ansi_ext.c
2213 --- ncbisrc/src/connect/ncbi_ansi_ext.c 2007-03-05 12:41:55.000000000 -0800
2214 +++ ncbisrc2/src/connect/ncbi_ansi_ext.c 2009-03-30 09:17:23.531074454 -0700
2215 @@ -1,3 +1,4 @@
2216 +#include <string.h>
2217 /* $Id: ncbi_ansi_ext.c 99676 2007-03-05 20:41:55Z kazimird $
2218 * ===========================================================================
2219 *
2220 diff -ur ncbisrc/src/connect/ncbi_ansi_ext.h ncbisrc2/src/connect/ncbi_ansi_ext.h
2221 --- ncbisrc/src/connect/ncbi_ansi_ext.h 2008-05-01 09:20:31.000000000 -0700
2222 +++ ncbisrc2/src/connect/ncbi_ansi_ext.h 2009-03-30 09:20:40.960231055 -0700
2223 @@ -1,6 +1,6 @@
2224 #ifndef CONNECT___NCBI_ANSI_EXT__H
2225 #define CONNECT___NCBI_ANSI_EXT__H
2226 -
2227 +#include <string.h>
2228 /* $Id: ncbi_ansi_ext.h 126384 2008-05-01 16:20:31Z lavr $
2229 * ===========================================================================
2230 *
2231 Only in ncbisrc2/src/connect: ncbi_ansi_ext.h~
2232 diff -ur ncbisrc/src/connect/ncbi_buffer.c ncbisrc2/src/connect/ncbi_buffer.c
2233 --- ncbisrc/src/connect/ncbi_buffer.c 2007-05-21 21:34:24.000000000 -0700
2234 +++ ncbisrc2/src/connect/ncbi_buffer.c 2009-03-30 09:17:23.728157840 -0700
2235 @@ -1,3 +1,4 @@
2236 +#include <string.h>
2237 /* $Id: ncbi_buffer.c 104318 2007-05-22 04:34:24Z joukovv $
2238 * ===========================================================================
2239 *
2240 diff -ur ncbisrc/src/connect/ncbi_conn_stream.cpp ncbisrc2/src/connect/ncbi_conn_stream.cpp
2241 --- ncbisrc/src/connect/ncbi_conn_stream.cpp 2008-06-25 13:08:25.000000000 -0700
2242 +++ ncbisrc2/src/connect/ncbi_conn_stream.cpp 2009-03-30 09:17:23.731532119 -0700
2243 @@ -1,3 +1,4 @@
2244 +#include <string.h>
2245 /* $Id: ncbi_conn_stream.cpp 132138 2008-06-25 20:08:25Z lavr $
2246 * ===========================================================================
2247 *
2248 diff -ur ncbisrc/src/connect/ncbi_conn_streambuf.cpp ncbisrc2/src/connect/ncbi_conn_streambuf.cpp
2249 --- ncbisrc/src/connect/ncbi_conn_streambuf.cpp 2008-05-05 08:22:14.000000000 -0700
2250 +++ ncbisrc2/src/connect/ncbi_conn_streambuf.cpp 2009-03-30 09:17:23.758197870 -0700
2251 @@ -1,3 +1,4 @@
2252 +#include <string.h>
2253 /* $Id: ncbi_conn_streambuf.cpp 126729 2008-05-05 15:22:14Z lavr $
2254 * ===========================================================================
2255 *
2256 diff -ur ncbisrc/src/connect/ncbi_connection.c ncbisrc2/src/connect/ncbi_connection.c
2257 --- ncbisrc/src/connect/ncbi_connection.c 2008-05-29 09:04:48.000000000 -0700
2258 +++ ncbisrc2/src/connect/ncbi_connection.c 2009-03-30 09:17:23.534509245 -0700
2259 @@ -1,3 +1,4 @@
2260 +#include <string.h>
2261 /* $Id: ncbi_connection.c 129067 2008-05-29 16:04:48Z lavr $
2262 * ===========================================================================
2263 *
2264 diff -ur ncbisrc/src/connect/ncbi_connutil.c ncbisrc2/src/connect/ncbi_connutil.c
2265 --- ncbisrc/src/connect/ncbi_connutil.c 2008-05-30 23:39:20.000000000 -0700
2266 +++ ncbisrc2/src/connect/ncbi_connutil.c 2009-03-30 09:17:23.514468340 -0700
2267 @@ -1,3 +1,4 @@
2268 +#include <string.h>
2269 /* $Id: ncbi_connutil.c 129355 2008-05-31 06:39:20Z lavr $
2270 * ===========================================================================
2271 *
2272 diff -ur ncbisrc/src/connect/ncbi_core.c ncbisrc2/src/connect/ncbi_core.c
2273 --- ncbisrc/src/connect/ncbi_core.c 2007-10-17 08:05:39.000000000 -0700
2274 +++ ncbisrc2/src/connect/ncbi_core.c 2009-03-30 09:17:23.564468465 -0700
2275 @@ -1,3 +1,4 @@
2276 +#include <string.h>
2277 /* $Id: ncbi_core.c 112400 2007-10-17 15:05:39Z ivanovp $
2278 * ===========================================================================
2279 *
2280 diff -ur ncbisrc/src/connect/ncbi_core_cxx.cpp ncbisrc2/src/connect/ncbi_core_cxx.cpp
2281 --- ncbisrc/src/connect/ncbi_core_cxx.cpp 2008-08-28 08:20:11.000000000 -0700
2282 +++ ncbisrc2/src/connect/ncbi_core_cxx.cpp 2009-03-30 09:17:23.517842930 -0700
2283 @@ -1,3 +1,4 @@
2284 +#include <string.h>
2285 /* $Id: ncbi_core_cxx.cpp 138763 2008-08-28 15:20:11Z lavr $
2286 * ===========================================================================
2287 *
2288 diff -ur ncbisrc/src/connect/ncbi_dispd.c ncbisrc2/src/connect/ncbi_dispd.c
2289 --- ncbisrc/src/connect/ncbi_dispd.c 2008-09-04 05:55:36.000000000 -0700
2290 +++ ncbisrc2/src/connect/ncbi_dispd.c 2009-03-30 09:17:23.734844768 -0700
2291 @@ -1,3 +1,4 @@
2292 +#include <string.h>
2293 /* $Id: ncbi_dispd.c 139308 2008-09-04 12:55:36Z lavr $
2294 * ===========================================================================
2295 *
2296 diff -ur ncbisrc/src/connect/ncbi_file_connector.c ncbisrc2/src/connect/ncbi_file_connector.c
2297 --- ncbisrc/src/connect/ncbi_file_connector.c 2007-03-05 12:41:55.000000000 -0800
2298 +++ ncbisrc2/src/connect/ncbi_file_connector.c 2009-03-30 09:17:23.527781435 -0700
2299 @@ -1,3 +1,4 @@
2300 +#include <string.h>
2301 /* $Id: ncbi_file_connector.c 99676 2007-03-05 20:41:55Z kazimird $
2302 * ===========================================================================
2303 *
2304 diff -ur ncbisrc/src/connect/ncbi_ftp_connector.c ncbisrc2/src/connect/ncbi_ftp_connector.c
2305 --- ncbisrc/src/connect/ncbi_ftp_connector.c 2008-05-24 11:27:38.000000000 -0700
2306 +++ ncbisrc2/src/connect/ncbi_ftp_connector.c 2009-03-30 09:17:23.761511534 -0700
2307 @@ -1,3 +1,4 @@
2308 +#include <string.h>
2309 /* $Id: ncbi_ftp_connector.c 128770 2008-05-24 18:27:38Z lavr $
2310 * ===========================================================================
2311 *
2312 diff -ur ncbisrc/src/connect/ncbi_heapmgr.c ncbisrc2/src/connect/ncbi_heapmgr.c
2313 --- ncbisrc/src/connect/ncbi_heapmgr.c 2008-05-30 20:22:47.000000000 -0700
2314 +++ ncbisrc2/src/connect/ncbi_heapmgr.c 2009-03-30 09:17:23.557801132 -0700
2315 @@ -1,3 +1,4 @@
2316 +#include <string.h>
2317 /* $Id: ncbi_heapmgr.c 129343 2008-05-31 03:22:47Z lavr $
2318 * ===========================================================================
2319 *
2320 diff -ur ncbisrc/src/connect/ncbi_host_info.c ncbisrc2/src/connect/ncbi_host_info.c
2321 --- ncbisrc/src/connect/ncbi_host_info.c 2008-09-03 13:31:30.000000000 -0700
2322 +++ ncbisrc2/src/connect/ncbi_host_info.c 2009-03-30 09:17:23.721531095 -0700
2323 @@ -1,3 +1,4 @@
2324 +#include <string.h>
2325 /* $Id: ncbi_host_info.c 139261 2008-09-03 20:31:30Z lavr $
2326 * ===========================================================================
2327 *
2328 diff -ur ncbisrc/src/connect/ncbi_http_connector.c ncbisrc2/src/connect/ncbi_http_connector.c
2329 --- ncbisrc/src/connect/ncbi_http_connector.c 2008-04-15 07:11:41.000000000 -0700
2330 +++ ncbisrc2/src/connect/ncbi_http_connector.c 2009-03-30 09:17:23.511135681 -0700
2331 @@ -1,3 +1,4 @@
2332 +#include <string.h>
2333 /* $Id: ncbi_http_connector.c 124505 2008-04-15 14:11:41Z lavr $
2334 * ===========================================================================
2335 *
2336 diff -ur ncbisrc/src/connect/ncbi_local.c ncbisrc2/src/connect/ncbi_local.c
2337 --- ncbisrc/src/connect/ncbi_local.c 2008-05-24 11:27:38.000000000 -0700
2338 +++ ncbisrc2/src/connect/ncbi_local.c 2009-03-30 09:17:23.554468973 -0700
2339 @@ -1,3 +1,4 @@
2340 +#include <string.h>
2341 /* $Id: ncbi_local.c 128770 2008-05-24 18:27:38Z lavr $
2342 * ===========================================================================
2343 *
2344 diff -ur ncbisrc/src/connect/ncbi_namedpipe.cpp ncbisrc2/src/connect/ncbi_namedpipe.cpp
2345 --- ncbisrc/src/connect/ncbi_namedpipe.cpp 2008-05-30 20:26:52.000000000 -0700
2346 +++ ncbisrc2/src/connect/ncbi_namedpipe.cpp 2009-03-30 09:17:23.711552699 -0700
2347 @@ -1,3 +1,4 @@
2348 +#include <string.h>
2349 /* $Id: ncbi_namedpipe.cpp 129351 2008-05-31 03:26:52Z lavr $
2350 * ===========================================================================
2351 *
2352 diff -ur ncbisrc/src/connect/ncbi_namedpipe_connector.cpp ncbisrc2/src/connect/ncbi_namedpipe_connector.cpp
2353 --- ncbisrc/src/connect/ncbi_namedpipe_connector.cpp 2007-05-04 10:18:18.000000000 -0700
2354 +++ ncbisrc2/src/connect/ncbi_namedpipe_connector.cpp 2009-03-30 09:17:23.744905006 -0700
2355 @@ -1,3 +1,4 @@
2356 +#include <string.h>
2357 /* $Id: ncbi_namedpipe_connector.cpp 103491 2007-05-04 17:18:18Z kazimird $
2358 * ===========================================================================
2359 *
2360 diff -ur ncbisrc/src/connect/ncbi_pipe.cpp ncbisrc2/src/connect/ncbi_pipe.cpp
2361 --- ncbisrc/src/connect/ncbi_pipe.cpp 2008-07-30 13:10:20.000000000 -0700
2362 +++ ncbisrc2/src/connect/ncbi_pipe.cpp 2009-03-30 09:17:23.544406902 -0700
2363 @@ -1,3 +1,4 @@
2364 +#include <string.h>
2365 /* $Id: ncbi_pipe.cpp 136132 2008-07-30 20:10:20Z lavr $
2366 * ===========================================================================
2367 *
2368 diff -ur ncbisrc/src/connect/ncbi_pipe_connector.cpp ncbisrc2/src/connect/ncbi_pipe_connector.cpp
2369 --- ncbisrc/src/connect/ncbi_pipe_connector.cpp 2007-05-04 10:18:18.000000000 -0700
2370 +++ ncbisrc2/src/connect/ncbi_pipe_connector.cpp 2009-03-30 09:17:23.524468709 -0700
2371 @@ -1,3 +1,4 @@
2372 +#include <string.h>
2373 /* $Id: ncbi_pipe_connector.cpp 103491 2007-05-04 17:18:18Z kazimird $
2374 * ===========================================================================
2375 *
2376 diff -ur ncbisrc/src/connect/ncbi_priv.c ncbisrc2/src/connect/ncbi_priv.c
2377 --- ncbisrc/src/connect/ncbi_priv.c 2007-03-05 12:41:55.000000000 -0800
2378 +++ ncbisrc2/src/connect/ncbi_priv.c 2009-03-30 09:17:23.718178023 -0700
2379 @@ -1,3 +1,4 @@
2380 +#include <string.h>
2381 /* $Id: ncbi_priv.c 99676 2007-03-05 20:41:55Z kazimird $
2382 * ===========================================================================
2383 *
2384 diff -ur ncbisrc/src/connect/ncbi_sendmail.c ncbisrc2/src/connect/ncbi_sendmail.c
2385 --- ncbisrc/src/connect/ncbi_sendmail.c 2008-05-24 11:27:38.000000000 -0700
2386 +++ ncbisrc2/src/connect/ncbi_sendmail.c 2009-03-30 09:17:23.571592403 -0700
2387 @@ -1,3 +1,4 @@
2388 +#include <string.h>
2389 /* $Id: ncbi_sendmail.c 128770 2008-05-24 18:27:38Z lavr $
2390 * ===========================================================================
2391 *
2392 diff -ur ncbisrc/src/connect/ncbi_server_info.c ncbisrc2/src/connect/ncbi_server_info.c
2393 --- ncbisrc/src/connect/ncbi_server_info.c 2008-05-28 21:15:45.000000000 -0700
2394 +++ ncbisrc2/src/connect/ncbi_server_info.c 2009-03-30 09:17:23.714849208 -0700
2395 @@ -1,3 +1,4 @@
2396 +#include <string.h>
2397 /* $Id: ncbi_server_info.c 128998 2008-05-29 04:15:45Z lavr $
2398 * ===========================================================================
2399 *
2400 diff -ur ncbisrc/src/connect/ncbi_service.c ncbisrc2/src/connect/ncbi_service.c
2401 --- ncbisrc/src/connect/ncbi_service.c 2008-09-04 10:35:27.000000000 -0700
2402 +++ ncbisrc2/src/connect/ncbi_service.c 2009-03-30 09:17:23.638259981 -0700
2403 @@ -1,3 +1,4 @@
2404 +#include <string.h>
2405 /* $Id: ncbi_service.c 139378 2008-09-04 17:35:27Z lavr $
2406 * ===========================================================================
2407 *
2408 diff -ur ncbisrc/src/connect/ncbi_service_connector.c ncbisrc2/src/connect/ncbi_service_connector.c
2409 --- ncbisrc/src/connect/ncbi_service_connector.c 2008-09-03 13:31:48.000000000 -0700
2410 +++ ncbisrc2/src/connect/ncbi_service_connector.c 2009-03-30 09:17:23.541135734 -0700
2411 @@ -1,3 +1,4 @@
2412 +#include <string.h>
2413 /* $Id: ncbi_service_connector.c 139262 2008-09-03 20:31:48Z lavr $
2414 * ===========================================================================
2415 *
2416 diff -ur ncbisrc/src/connect/ncbi_socket.c ncbisrc2/src/connect/ncbi_socket.c
2417 --- ncbisrc/src/connect/ncbi_socket.c 2008-07-29 08:40:04.000000000 -0700
2418 +++ ncbisrc2/src/connect/ncbi_socket.c 2009-03-30 09:17:23.751552124 -0700
2419 @@ -1,3 +1,4 @@
2420 +#include <string.h>
2421 /* $Id: ncbi_socket.c 135868 2008-07-29 15:40:04Z lavr $
2422 * ===========================================================================
2423 *
2424 diff -ur ncbisrc/src/connect/ncbi_socket_connector.c ncbisrc2/src/connect/ncbi_socket_connector.c
2425 --- ncbisrc/src/connect/ncbi_socket_connector.c 2007-03-05 12:41:55.000000000 -0800
2426 +++ ncbisrc2/src/connect/ncbi_socket_connector.c 2009-03-30 09:17:23.748178747 -0700
2427 @@ -1,3 +1,4 @@
2428 +#include <string.h>
2429 /* $Id: ncbi_socket_connector.c 99676 2007-03-05 20:41:55Z kazimird $
2430 * ===========================================================================
2431 *
2432 diff -ur ncbisrc/src/connect/ncbi_util.c ncbisrc2/src/connect/ncbi_util.c
2433 --- ncbisrc/src/connect/ncbi_util.c 2008-06-25 13:08:52.000000000 -0700
2434 +++ ncbisrc2/src/connect/ncbi_util.c 2009-03-30 09:17:23.704925300 -0700
2435 @@ -1,3 +1,4 @@
2436 +#include <string.h>
2437 /* $Id: ncbi_util.c 132140 2008-06-25 20:08:52Z lavr $
2438 * ===========================================================================
2439 *
2440 diff -ur ncbisrc/src/connect/services/grid_control_thread.cpp ncbisrc2/src/connect/services/grid_control_thread.cpp
2441 --- ncbisrc/src/connect/services/grid_control_thread.cpp 2008-02-26 17:02:01.000000000 -0800
2442 +++ ncbisrc2/src/connect/services/grid_control_thread.cpp 2009-03-30 09:17:23.698157943 -0700
2443 @@ -1,3 +1,4 @@
2444 +#include <string.h>
2445 /* $Id: grid_control_thread.cpp 120746 2008-02-27 01:02:01Z kazimird $
2446 * ===========================================================================
2447 *
2448 diff -ur ncbisrc/src/connect/services/grid_rw_impl.cpp ncbisrc2/src/connect/services/grid_rw_impl.cpp
2449 --- ncbisrc/src/connect/services/grid_rw_impl.cpp 2008-04-11 08:13:17.000000000 -0700
2450 +++ ncbisrc2/src/connect/services/grid_rw_impl.cpp 2009-03-30 09:17:23.671490937 -0700
2451 @@ -1,3 +1,4 @@
2452 +#include <string.h>
2453 /* $Id: grid_rw_impl.cpp 124328 2008-04-11 15:13:17Z kazimird $
2454 * ===========================================================================
2455 *
2456 diff -ur ncbisrc/src/connect/services/grid_worker.cpp ncbisrc2/src/connect/services/grid_worker.cpp
2457 --- ncbisrc/src/connect/services/grid_worker.cpp 2008-06-24 06:33:27.000000000 -0700
2458 +++ ncbisrc2/src/connect/services/grid_worker.cpp 2009-03-30 09:17:23.701532505 -0700
2459 @@ -1,3 +1,4 @@
2460 +#include <string.h>
2461 /* $Id: grid_worker.cpp 131910 2008-06-24 13:33:27Z kazimird $
2462 * ===========================================================================
2463 *
2464 diff -ur ncbisrc/src/connect/services/grid_worker_app_impl.cpp ncbisrc2/src/connect/services/grid_worker_app_impl.cpp
2465 --- ncbisrc/src/connect/services/grid_worker_app_impl.cpp 2008-06-24 06:33:27.000000000 -0700
2466 +++ ncbisrc2/src/connect/services/grid_worker_app_impl.cpp 2009-03-30 09:17:23.674865258 -0700
2467 @@ -1,3 +1,4 @@
2468 +#include <string.h>
2469 /* $Id: grid_worker_app_impl.cpp 131910 2008-06-24 13:33:27Z kazimird $
2470 * ===========================================================================
2471 *
2472 diff -ur ncbisrc/src/connect/services/netbvstore_client.cpp ncbisrc2/src/connect/services/netbvstore_client.cpp
2473 --- ncbisrc/src/connect/services/netbvstore_client.cpp 2008-02-26 12:02:31.000000000 -0800
2474 +++ ncbisrc2/src/connect/services/netbvstore_client.cpp 2009-03-30 09:17:23.681512056 -0700
2475 @@ -1,3 +1,4 @@
2476 +#include <string.h>
2477 /* $Id: netbvstore_client.cpp 120679 2008-02-26 20:02:31Z kazimird $
2478 * ===========================================================================
2479 *
2480 diff -ur ncbisrc/src/connect/services/netcache_api.cpp ncbisrc2/src/connect/services/netcache_api.cpp
2481 --- ncbisrc/src/connect/services/netcache_api.cpp 2008-09-18 14:35:14.000000000 -0700
2482 +++ ncbisrc2/src/connect/services/netcache_api.cpp 2009-03-30 09:17:23.694865389 -0700
2483 @@ -1,3 +1,4 @@
2484 +#include <string.h>
2485 /* $Id: netcache_api.cpp 140664 2008-09-18 21:35:14Z ivanovp $
2486 * ===========================================================================
2487 *
2488 diff -ur ncbisrc/src/connect/services/netcache_client.cpp ncbisrc2/src/connect/services/netcache_client.cpp
2489 --- ncbisrc/src/connect/services/netcache_client.cpp 2008-08-28 08:59:26.000000000 -0700
2490 +++ ncbisrc2/src/connect/services/netcache_client.cpp 2009-03-30 09:17:23.668239287 -0700
2491 @@ -1,3 +1,4 @@
2492 +#include <string.h>
2493 /* $Id: netcache_client.cpp 138773 2008-08-28 15:59:26Z vasilche $
2494 * ===========================================================================
2495 *
2496 diff -ur ncbisrc/src/connect/services/netschedule_client.cpp ncbisrc2/src/connect/services/netschedule_client.cpp
2497 --- ncbisrc/src/connect/services/netschedule_client.cpp 2008-08-06 09:37:07.000000000 -0700
2498 +++ ncbisrc2/src/connect/services/netschedule_client.cpp 2009-03-30 09:17:23.688157223 -0700
2499 @@ -1,3 +1,4 @@
2500 +#include <string.h>
2501 /* $Id: netschedule_client.cpp 136726 2008-08-06 16:37:07Z kazimird $
2502 * ===========================================================================
2503 *
2504 diff -ur ncbisrc/src/connect/services/remote_app_mb.cpp ncbisrc2/src/connect/services/remote_app_mb.cpp
2505 --- ncbisrc/src/connect/services/remote_app_mb.cpp 2008-05-09 17:03:46.000000000 -0700
2506 +++ ncbisrc2/src/connect/services/remote_app_mb.cpp 2009-03-30 09:17:23.644865312 -0700
2507 @@ -1,3 +1,4 @@
2508 +#include <string.h>
2509 /* $Id: remote_app_mb.cpp 127288 2008-05-10 00:03:46Z kazimird $
2510 * ===========================================================================
2511 *
2512 diff -ur ncbisrc/src/connect/services/remote_app_sb.cpp ncbisrc2/src/connect/services/remote_app_sb.cpp
2513 --- ncbisrc/src/connect/services/remote_app_sb.cpp 2008-02-26 12:02:31.000000000 -0800
2514 +++ ncbisrc2/src/connect/services/remote_app_sb.cpp 2009-03-30 09:17:23.684925578 -0700
2515 @@ -1,3 +1,4 @@
2516 +#include <string.h>
2517 /* $Id: remote_app_sb.cpp 120679 2008-02-26 20:02:31Z kazimird $
2518 * ===========================================================================
2519 *
2520 diff -ur ncbisrc/src/connect/services/test/test_ic_client.cpp ncbisrc2/src/connect/services/test/test_ic_client.cpp
2521 --- ncbisrc/src/connect/services/test/test_ic_client.cpp 2008-07-07 09:08:06.000000000 -0700
2522 +++ ncbisrc2/src/connect/services/test/test_ic_client.cpp 2009-03-30 09:17:23.661531136 -0700
2523 @@ -1,3 +1,4 @@
2524 +#include <string.h>
2525 /* $Id: test_ic_client.cpp 133043 2008-07-07 16:08:06Z kazimird $
2526 * ===========================================================================
2527 *
2528 diff -ur ncbisrc/src/connect/services/test/test_netcache_api.cpp ncbisrc2/src/connect/services/test/test_netcache_api.cpp
2529 --- ncbisrc/src/connect/services/test/test_netcache_api.cpp 2008-02-26 12:02:31.000000000 -0800
2530 +++ ncbisrc2/src/connect/services/test/test_netcache_api.cpp 2009-03-30 09:17:23.658279106 -0700
2531 @@ -1,3 +1,4 @@
2532 +#include <string.h>
2533 /* $Id: test_netcache_api.cpp 120679 2008-02-26 20:02:31Z kazimird $
2534 * ===========================================================================
2535 *
2536 diff -ur ncbisrc/src/connect/services/test/test_netcache_client.cpp ncbisrc2/src/connect/services/test/test_netcache_client.cpp
2537 --- ncbisrc/src/connect/services/test/test_netcache_client.cpp 2008-02-26 12:02:31.000000000 -0800
2538 +++ ncbisrc2/src/connect/services/test/test_netcache_client.cpp 2009-03-30 09:17:23.651491745 -0700
2539 @@ -1,3 +1,4 @@
2540 +#include <string.h>
2541 /* $Id: test_netcache_client.cpp 120679 2008-02-26 20:02:31Z kazimird $
2542 * ===========================================================================
2543 *
2544 diff -ur ncbisrc/src/connect/test/http_connector_hit.c ncbisrc2/src/connect/test/http_connector_hit.c
2545 --- ncbisrc/src/connect/test/http_connector_hit.c 2007-03-05 12:41:55.000000000 -0800
2546 +++ ncbisrc2/src/connect/test/http_connector_hit.c 2009-03-30 09:17:23.618198802 -0700
2547 @@ -1,3 +1,4 @@
2548 +#include <string.h>
2549 /* $Id: http_connector_hit.c 99676 2007-03-05 20:41:55Z kazimird $
2550 * ===========================================================================
2551 *
2552 diff -ur ncbisrc/src/connect/test/ncbi_conntest.c ncbisrc2/src/connect/test/ncbi_conntest.c
2553 --- ncbisrc/src/connect/test/ncbi_conntest.c 2007-04-17 04:22:42.000000000 -0700
2554 +++ ncbisrc2/src/connect/test/ncbi_conntest.c 2009-03-30 09:17:23.601511878 -0700
2555 @@ -1,3 +1,4 @@
2556 +#include <string.h>
2557 /* $Id: ncbi_conntest.c 102332 2007-04-17 11:22:42Z lavr $
2558 * ===========================================================================
2559 *
2560 diff -ur ncbisrc/src/connect/test/test_fw.c ncbisrc2/src/connect/test/test_fw.c
2561 --- ncbisrc/src/connect/test/test_fw.c 2007-03-05 12:41:55.000000000 -0800
2562 +++ ncbisrc2/src/connect/test/test_fw.c 2009-03-30 09:17:23.631492200 -0700
2563 @@ -1,3 +1,4 @@
2564 +#include <string.h>
2565 /* $Id: test_fw.c 99676 2007-03-05 20:41:55Z kazimird $
2566 * ===========================================================================
2567 *
2568 diff -ur ncbisrc/src/connect/test/test_ncbi_buffer.c ncbisrc2/src/connect/test/test_ncbi_buffer.c
2569 --- ncbisrc/src/connect/test/test_ncbi_buffer.c 2007-03-05 12:41:55.000000000 -0800
2570 +++ ncbisrc2/src/connect/test/test_ncbi_buffer.c 2009-03-30 09:17:23.574824570 -0700
2571 @@ -1,3 +1,4 @@
2572 +#include <string.h>
2573 /* $Id: test_ncbi_buffer.c 99676 2007-03-05 20:41:55Z kazimird $
2574 * ===========================================================================
2575 *
2576 diff -ur ncbisrc/src/connect/test/test_ncbi_connutil_misc.c ncbisrc2/src/connect/test/test_ncbi_connutil_misc.c
2577 --- ncbisrc/src/connect/test/test_ncbi_connutil_misc.c 2008-03-12 11:43:48.000000000 -0700
2578 +++ ncbisrc2/src/connect/test/test_ncbi_connutil_misc.c 2009-03-30 09:17:23.588218070 -0700
2579 @@ -1,3 +1,4 @@
2580 +#include <string.h>
2581 /* $Id: test_ncbi_connutil_misc.c 121904 2008-03-12 18:43:48Z lavr $
2582 * ===========================================================================
2583 *
2584 diff -ur ncbisrc/src/connect/test/test_ncbi_disp.c ncbisrc2/src/connect/test/test_ncbi_disp.c
2585 --- ncbisrc/src/connect/test/test_ncbi_disp.c 2008-04-30 07:39:45.000000000 -0700
2586 +++ ncbisrc2/src/connect/test/test_ncbi_disp.c 2009-03-30 09:17:23.591531412 -0700
2587 @@ -1,3 +1,4 @@
2588 +#include <string.h>
2589 /* $Id: test_ncbi_disp.c 126172 2008-04-30 14:39:45Z lavr $
2590 * ===========================================================================
2591 *
2592 diff -ur ncbisrc/src/connect/test/test_ncbi_dsock.c ncbisrc2/src/connect/test/test_ncbi_dsock.c
2593 --- ncbisrc/src/connect/test/test_ncbi_dsock.c 2008-05-01 09:22:25.000000000 -0700
2594 +++ ncbisrc2/src/connect/test/test_ncbi_dsock.c 2009-03-30 09:17:23.581511896 -0700
2595 @@ -1,3 +1,4 @@
2596 +#include <string.h>
2597 /* $Id: test_ncbi_dsock.c 126389 2008-05-01 16:22:25Z lavr $
2598 * ===========================================================================
2599 *
2600 diff -ur ncbisrc/src/connect/test/test_ncbi_http_connector.c ncbisrc2/src/connect/test/test_ncbi_http_connector.c
2601 --- ncbisrc/src/connect/test/test_ncbi_http_connector.c 2007-03-05 12:41:55.000000000 -0800
2602 +++ ncbisrc2/src/connect/test/test_ncbi_http_connector.c 2009-03-30 09:17:23.628158140 -0700
2603 @@ -1,3 +1,4 @@
2604 +#include <string.h>
2605 /* $Id: test_ncbi_http_connector.c 99676 2007-03-05 20:41:55Z kazimird $
2606 * ===========================================================================
2607 *
2608 diff -ur ncbisrc/src/connect/test/test_ncbi_http_get.c ncbisrc2/src/connect/test/test_ncbi_http_get.c
2609 --- ncbisrc/src/connect/test/test_ncbi_http_get.c 2007-09-26 07:50:12.000000000 -0700
2610 +++ ncbisrc2/src/connect/test/test_ncbi_http_get.c 2009-03-30 09:17:23.621510913 -0700
2611 @@ -1,3 +1,4 @@
2612 +#include <string.h>
2613 /* $Id: test_ncbi_http_get.c 111301 2007-09-26 14:50:12Z lavr $
2614 * ===========================================================================
2615 *
2616 diff -ur ncbisrc/src/connect/test/test_ncbi_namedpipe.cpp ncbisrc2/src/connect/test/test_ncbi_namedpipe.cpp
2617 --- ncbisrc/src/connect/test/test_ncbi_namedpipe.cpp 2007-05-11 08:51:10.000000000 -0700
2618 +++ ncbisrc2/src/connect/test/test_ncbi_namedpipe.cpp 2009-03-30 09:17:23.614985830 -0700
2619 @@ -1,3 +1,4 @@
2620 +#include <string.h>
2621 /* $Id: test_ncbi_namedpipe.cpp 103870 2007-05-11 15:51:10Z lavr $
2622 * ===========================================================================
2623 *
2624 diff -ur ncbisrc/src/connect/test/test_ncbi_pipe.cpp ncbisrc2/src/connect/test/test_ncbi_pipe.cpp
2625 --- ncbisrc/src/connect/test/test_ncbi_pipe.cpp 2007-10-05 07:43:12.000000000 -0700
2626 +++ ncbisrc2/src/connect/test/test_ncbi_pipe.cpp 2009-03-30 09:17:23.578198591 -0700
2627 @@ -1,3 +1,4 @@
2628 +#include <string.h>
2629 /* $Id: test_ncbi_pipe.cpp 111823 2007-10-05 14:43:12Z ivanov $
2630 * ===========================================================================
2631 *
2632 diff -ur ncbisrc/src/connect/test/test_ncbi_pipe_connector.cpp ncbisrc2/src/connect/test/test_ncbi_pipe_connector.cpp
2633 --- ncbisrc/src/connect/test/test_ncbi_pipe_connector.cpp 2007-05-04 10:18:18.000000000 -0700
2634 +++ ncbisrc2/src/connect/test/test_ncbi_pipe_connector.cpp 2009-03-30 09:17:23.598238244 -0700
2635 @@ -1,3 +1,4 @@
2636 +#include <string.h>
2637 /* $Id: test_ncbi_pipe_connector.cpp 103491 2007-05-04 17:18:18Z kazimird $
2638 * ===========================================================================
2639 *
2640 diff -ur ncbisrc/src/connect/test/test_ncbi_sendmail.c ncbisrc2/src/connect/test/test_ncbi_sendmail.c
2641 --- ncbisrc/src/connect/test/test_ncbi_sendmail.c 2008-03-14 20:29:14.000000000 -0700
2642 +++ ncbisrc2/src/connect/test/test_ncbi_sendmail.c 2009-03-30 09:17:23.634865633 -0700
2643 @@ -1,3 +1,4 @@
2644 +#include <string.h>
2645 /* $Id: test_ncbi_sendmail.c 122188 2008-03-15 03:29:14Z lavr $
2646 * ===========================================================================
2647 *
2648 diff -ur ncbisrc/src/connect/test/test_ncbi_service_connector.c ncbisrc2/src/connect/test/test_ncbi_service_connector.c
2649 --- ncbisrc/src/connect/test/test_ncbi_service_connector.c 2007-03-05 12:41:55.000000000 -0800
2650 +++ ncbisrc2/src/connect/test/test_ncbi_service_connector.c 2009-03-30 09:17:23.611511986 -0700
2651 @@ -1,3 +1,4 @@
2652 +#include <string.h>
2653 /* $Id: test_ncbi_service_connector.c 99676 2007-03-05 20:41:55Z kazimird $
2654 * ===========================================================================
2655 *
2656 diff -ur ncbisrc/src/connect/test/test_ncbi_socket.c ncbisrc2/src/connect/test/test_ncbi_socket.c
2657 --- ncbisrc/src/connect/test/test_ncbi_socket.c 2007-10-18 19:33:06.000000000 -0700
2658 +++ ncbisrc2/src/connect/test/test_ncbi_socket.c 2009-03-30 09:17:23.604824036 -0700
2659 @@ -1,3 +1,4 @@
2660 +#include <string.h>
2661 /* $Id: test_ncbi_socket.c 112524 2007-10-19 02:33:06Z lavr $
2662 * ===========================================================================
2663 *
2664 diff -ur ncbisrc/src/connect/threaded_server.cpp ncbisrc2/src/connect/threaded_server.cpp
2665 --- ncbisrc/src/connect/threaded_server.cpp 2007-10-18 15:40:59.000000000 -0700
2666 +++ ncbisrc2/src/connect/threaded_server.cpp 2009-03-30 09:17:23.547802293 -0700
2667 @@ -1,3 +1,4 @@
2668 +#include <string.h>
2669 /* $Id: threaded_server.cpp 112520 2007-10-18 22:40:59Z ivanovp $
2670 * ===========================================================================
2671 *
2672 diff -ur ncbisrc/src/corelib/env_reg.cpp ncbisrc2/src/corelib/env_reg.cpp
2673 --- ncbisrc/src/corelib/env_reg.cpp 2007-10-10 11:46:30.000000000 -0700
2674 +++ ncbisrc2/src/corelib/env_reg.cpp 2009-03-30 09:17:22.684427593 -0700
2675 @@ -1,3 +1,4 @@
2676 +#include <string.h>
2677 /* $Id: env_reg.cpp 112029 2007-10-10 18:46:30Z ivanovp $
2678 * ===========================================================================
2679 *
2680 diff -ur ncbisrc/src/corelib/expr.cpp ncbisrc2/src/corelib/expr.cpp
2681 --- ncbisrc/src/corelib/expr.cpp 2008-08-07 11:53:58.000000000 -0700
2682 +++ ncbisrc2/src/corelib/expr.cpp 2009-03-30 09:17:22.851115466 -0700
2683 @@ -1,3 +1,4 @@
2684 +#include <string.h>
2685 /* $Id: expr.cpp 136862 2008-08-07 18:53:58Z ssikorsk $
2686 * ===========================================================================
2687 *
2688 diff -ur ncbisrc/src/corelib/metareg.cpp ncbisrc2/src/corelib/metareg.cpp
2689 --- ncbisrc/src/corelib/metareg.cpp 2008-08-29 13:15:26.000000000 -0700
2690 +++ ncbisrc2/src/corelib/metareg.cpp 2009-03-30 09:17:22.821114438 -0700
2691 @@ -1,3 +1,4 @@
2692 +#include <string.h>
2693 /* $Id: metareg.cpp 138969 2008-08-29 20:15:26Z ucko $
2694 * ===========================================================================
2695 *
2696 diff -ur ncbisrc/src/corelib/ncbi_os_mac.cpp ncbisrc2/src/corelib/ncbi_os_mac.cpp
2697 --- ncbisrc/src/corelib/ncbi_os_mac.cpp 2007-05-04 10:18:18.000000000 -0700
2698 +++ ncbisrc2/src/corelib/ncbi_os_mac.cpp 2009-03-30 09:17:22.671115337 -0700
2699 @@ -1,3 +1,4 @@
2700 +#include <string.h>
2701 /* $Id: ncbi_os_mac.cpp 103491 2007-05-04 17:18:18Z kazimird $
2702 * ===========================================================================
2703 *
2704 diff -ur ncbisrc/src/corelib/ncbi_os_mswin.cpp ncbisrc2/src/corelib/ncbi_os_mswin.cpp
2705 --- ncbisrc/src/corelib/ncbi_os_mswin.cpp 2007-05-04 10:18:18.000000000 -0700
2706 +++ ncbisrc2/src/corelib/ncbi_os_mswin.cpp 2009-03-30 09:17:22.711074862 -0700
2707 @@ -1,3 +1,4 @@
2708 +#include <string.h>
2709 /* $Id: ncbi_os_mswin.cpp 103491 2007-05-04 17:18:18Z kazimird $
2710 * ===========================================================================
2711 *
2712 diff -ur ncbisrc/src/corelib/ncbi_os_unix.cpp ncbisrc2/src/corelib/ncbi_os_unix.cpp
2713 --- ncbisrc/src/corelib/ncbi_os_unix.cpp 2008-07-10 11:49:02.000000000 -0700
2714 +++ ncbisrc2/src/corelib/ncbi_os_unix.cpp 2009-03-30 09:17:22.664489111 -0700
2715 @@ -1,3 +1,4 @@
2716 +#include <string.h>
2717 /* $Id: ncbi_os_unix.cpp 133471 2008-07-10 18:49:02Z lavr $
2718 * ===========================================================================
2719 *
2720 diff -ur ncbisrc/src/corelib/ncbi_process.cpp ncbisrc2/src/corelib/ncbi_process.cpp
2721 --- ncbisrc/src/corelib/ncbi_process.cpp 2008-03-10 11:53:58.000000000 -0700
2722 +++ ncbisrc2/src/corelib/ncbi_process.cpp 2009-03-30 09:17:22.691073990 -0700
2723 @@ -1,3 +1,4 @@
2724 +#include <string.h>
2725 /* $Id: ncbi_process.cpp 121670 2008-03-10 18:53:58Z ivanov $
2726 * ===========================================================================
2727 *
2728 diff -ur ncbisrc/src/corelib/ncbi_signal.cpp ncbisrc2/src/corelib/ncbi_signal.cpp
2729 --- ncbisrc/src/corelib/ncbi_signal.cpp 2007-10-16 05:26:07.000000000 -0700
2730 +++ ncbisrc2/src/corelib/ncbi_signal.cpp 2009-03-30 09:17:22.804468080 -0700
2731 @@ -1,3 +1,4 @@
2732 +#include <string.h>
2733 /* $Id: ncbi_signal.cpp 112322 2007-10-16 12:26:07Z dicuccio $
2734 * ===========================================================================
2735 *
2736 diff -ur ncbisrc/src/corelib/ncbi_stack_win32.cpp ncbisrc2/src/corelib/ncbi_stack_win32.cpp
2737 --- ncbisrc/src/corelib/ncbi_stack_win32.cpp 2008-05-07 07:34:49.000000000 -0700
2738 +++ ncbisrc2/src/corelib/ncbi_stack_win32.cpp 2009-03-30 09:17:22.707781248 -0700
2739 @@ -1,3 +1,4 @@
2740 +#include <string.h>
2741 /* $Id: ncbi_stack_win32.cpp 126936 2008-05-07 14:34:49Z grichenk $
2742 * ===========================================================================
2743 *
2744 diff -ur ncbisrc/src/corelib/ncbi_system.cpp ncbisrc2/src/corelib/ncbi_system.cpp
2745 --- ncbisrc/src/corelib/ncbi_system.cpp 2008-11-03 09:10:21.000000000 -0800
2746 +++ ncbisrc2/src/corelib/ncbi_system.cpp 2009-03-30 09:17:22.824479250 -0700
2747 @@ -1,3 +1,4 @@
2748 +#include <string.h>
2749 /* $Id: ncbi_system.cpp 144727 2008-11-03 17:10:21Z kazimird $
2750 * ===========================================================================
2751 *
2752 diff -ur ncbisrc/src/corelib/ncbiapp.cpp ncbisrc2/src/corelib/ncbiapp.cpp
2753 --- ncbisrc/src/corelib/ncbiapp.cpp 2008-08-12 11:02:47.000000000 -0700
2754 +++ ncbisrc2/src/corelib/ncbiapp.cpp 2009-03-30 09:17:22.717822635 -0700
2755 @@ -1,3 +1,4 @@
2756 +#include <string.h>
2757 /* $Id: ncbiapp.cpp 137126 2008-08-12 18:02:47Z grichenk $
2758 * ===========================================================================
2759 *
2760 diff -ur ncbisrc/src/corelib/ncbiargs.cpp ncbisrc2/src/corelib/ncbiargs.cpp
2761 --- ncbisrc/src/corelib/ncbiargs.cpp 2008-07-02 06:30:47.000000000 -0700
2762 +++ ncbisrc2/src/corelib/ncbiargs.cpp 2009-03-30 09:17:22.797760934 -0700
2763 @@ -1,3 +1,4 @@
2764 +#include <string.h>
2765 /* $Id: ncbiargs.cpp 132739 2008-07-02 13:30:47Z gouriano $
2766 * ===========================================================================
2767 *
2768 diff -ur ncbisrc/src/corelib/ncbidiag.cpp ncbisrc2/src/corelib/ncbidiag.cpp
2769 --- ncbisrc/src/corelib/ncbidiag.cpp 2008-10-31 09:29:21.000000000 -0700
2770 +++ ncbisrc2/src/corelib/ncbidiag.cpp 2009-03-30 09:17:22.837781938 -0700
2771 @@ -1,3 +1,4 @@
2772 +#include <string.h>
2773 /* $Id: ncbidiag.cpp 144608 2008-10-31 16:29:21Z grichenk $
2774 * ===========================================================================
2775 *
2776 diff -ur ncbisrc/src/corelib/ncbidiag_p.cpp ncbisrc2/src/corelib/ncbidiag_p.cpp
2777 --- ncbisrc/src/corelib/ncbidiag_p.cpp 2008-05-15 10:08:36.000000000 -0700
2778 +++ ncbisrc2/src/corelib/ncbidiag_p.cpp 2009-03-30 09:17:22.807802227 -0700
2779 @@ -1,3 +1,4 @@
2780 +#include <string.h>
2781 /* $Id: ncbidiag_p.cpp 127767 2008-05-15 17:08:36Z gouriano $
2782 * ===========================================================================
2783 *
2784 diff -ur ncbisrc/src/corelib/ncbienv.cpp ncbisrc2/src/corelib/ncbienv.cpp
2785 --- ncbisrc/src/corelib/ncbienv.cpp 2008-09-10 13:45:39.000000000 -0700
2786 +++ ncbisrc2/src/corelib/ncbienv.cpp 2009-03-30 09:17:22.834468575 -0700
2787 @@ -1,3 +1,4 @@
2788 +#include <string.h>
2789 /* $Id: ncbienv.cpp 139936 2008-09-10 20:45:39Z ucko $
2790 * ===========================================================================
2791 *
2792 diff -ur ncbisrc/src/corelib/ncbiexec.cpp ncbisrc2/src/corelib/ncbiexec.cpp
2793 --- ncbisrc/src/corelib/ncbiexec.cpp 2008-06-18 06:13:02.000000000 -0700
2794 +++ ncbisrc2/src/corelib/ncbiexec.cpp 2009-03-30 09:17:22.704468775 -0700
2795 @@ -1,3 +1,4 @@
2796 +#include <string.h>
2797 /* $Id: ncbiexec.cpp 131267 2008-06-18 13:13:02Z ivanov $
2798 * ===========================================================================
2799 *
2800 diff -ur ncbisrc/src/corelib/ncbiexpt.cpp ncbisrc2/src/corelib/ncbiexpt.cpp
2801 --- ncbisrc/src/corelib/ncbiexpt.cpp 2008-04-21 09:32:41.000000000 -0700
2802 +++ ncbisrc2/src/corelib/ncbiexpt.cpp 2009-03-30 09:17:22.841073654 -0700
2803 @@ -1,3 +1,4 @@
2804 +#include <string.h>
2805 /* $Id: ncbiexpt.cpp 125142 2008-04-21 16:32:41Z grichenk $
2806 * ===========================================================================
2807 *
2808 diff -ur ncbisrc/src/corelib/ncbifile.cpp ncbisrc2/src/corelib/ncbifile.cpp
2809 --- ncbisrc/src/corelib/ncbifile.cpp 2008-08-25 05:35:21.000000000 -0700
2810 +++ ncbisrc2/src/corelib/ncbifile.cpp 2009-03-30 09:17:22.787822449 -0700
2811 @@ -1,3 +1,4 @@
2812 +#include <string.h>
2813 /* $Id: ncbifile.cpp 138342 2008-08-25 12:35:21Z ivanov $
2814 * ===========================================================================
2815 *
2816 diff -ur ncbisrc/src/corelib/ncbimtx.cpp ncbisrc2/src/corelib/ncbimtx.cpp
2817 --- ncbisrc/src/corelib/ncbimtx.cpp 2008-07-23 13:50:15.000000000 -0700
2818 +++ ncbisrc2/src/corelib/ncbimtx.cpp 2009-03-30 09:17:22.701135814 -0700
2819 @@ -1,3 +1,4 @@
2820 +#include <string.h>
2821 /* $Id: ncbimtx.cpp 135229 2008-07-23 20:50:15Z vasilche $
2822 * ===========================================================================
2823 *
2824 diff -ur ncbisrc/src/corelib/ncbiobj.cpp ncbisrc2/src/corelib/ncbiobj.cpp
2825 --- ncbisrc/src/corelib/ncbiobj.cpp 2008-07-24 13:58:37.000000000 -0700
2826 +++ ncbisrc2/src/corelib/ncbiobj.cpp 2009-03-30 09:17:22.687802376 -0700
2827 @@ -1,3 +1,4 @@
2828 +#include <string.h>
2829 /* $Id: ncbiobj.cpp 135449 2008-07-24 20:58:37Z vasilche $
2830 * ===========================================================================
2831 *
2832 diff -ur ncbisrc/src/corelib/ncbireg.cpp ncbisrc2/src/corelib/ncbireg.cpp
2833 --- ncbisrc/src/corelib/ncbireg.cpp 2008-08-18 08:51:53.000000000 -0700
2834 +++ ncbisrc2/src/corelib/ncbireg.cpp 2009-03-30 09:17:22.794469003 -0700
2835 @@ -1,3 +1,4 @@
2836 +#include <string.h>
2837 /* $Id: ncbireg.cpp 137706 2008-08-18 15:51:53Z ucko $
2838 * ===========================================================================
2839 *
2840 diff -ur ncbisrc/src/corelib/ncbistr.cpp ncbisrc2/src/corelib/ncbistr.cpp
2841 --- ncbisrc/src/corelib/ncbistr.cpp 2008-09-11 11:45:00.000000000 -0700
2842 +++ ncbisrc2/src/corelib/ncbistr.cpp 2009-03-30 09:17:22.811094487 -0700
2843 @@ -1,3 +1,4 @@
2844 +#include <string.h>
2845 /* $Id: ncbistr.cpp 140007 2008-09-11 18:45:00Z grichenk $
2846 * ===========================================================================
2847 *
2848 diff -ur ncbisrc/src/corelib/ncbistre.cpp ncbisrc2/src/corelib/ncbistre.cpp
2849 --- ncbisrc/src/corelib/ncbistre.cpp 2007-12-05 10:59:41.000000000 -0800
2850 +++ ncbisrc2/src/corelib/ncbistre.cpp 2009-03-30 09:17:22.674448273 -0700
2851 @@ -1,3 +1,4 @@
2852 +#include <string.h>
2853 /* $Id: ncbistre.cpp 115078 2007-12-05 18:59:41Z grichenk $
2854 * ===========================================================================
2855 *
2856 diff -ur ncbisrc/src/corelib/ncbitime.cpp ncbisrc2/src/corelib/ncbitime.cpp
2857 --- ncbisrc/src/corelib/ncbitime.cpp 2008-09-10 08:29:49.000000000 -0700
2858 +++ ncbisrc2/src/corelib/ncbitime.cpp 2009-03-30 09:17:22.817761385 -0700
2859 @@ -1,3 +1,4 @@
2860 +#include <string.h>
2861 /* $Id: ncbitime.cpp 139875 2008-09-10 15:29:49Z ivanov $
2862 * ===========================================================================
2863 *
2864 diff -ur ncbisrc/src/corelib/request_ctx.cpp ncbisrc2/src/corelib/request_ctx.cpp
2865 --- ncbisrc/src/corelib/request_ctx.cpp 2008-09-11 11:45:00.000000000 -0700
2866 +++ ncbisrc2/src/corelib/request_ctx.cpp 2009-03-30 09:17:22.694448630 -0700
2867 @@ -1,3 +1,4 @@
2868 +#include <string.h>
2869 /* $Id: request_ctx.cpp 140007 2008-09-11 18:45:00Z grichenk $
2870 * ===========================================================================
2871 *
2872 diff -ur ncbisrc/src/corelib/rwstreambuf.cpp ncbisrc2/src/corelib/rwstreambuf.cpp
2873 --- ncbisrc/src/corelib/rwstreambuf.cpp 2008-06-02 09:51:02.000000000 -0700
2874 +++ ncbisrc2/src/corelib/rwstreambuf.cpp 2009-03-30 09:17:22.677781144 -0700
2875 @@ -1,3 +1,4 @@
2876 +#include <string.h>
2877 /* $Id: rwstreambuf.cpp 129455 2008-06-02 16:51:02Z lavr $
2878 * ===========================================================================
2879 *
2880 diff -ur ncbisrc/src/corelib/stream_utils.cpp ncbisrc2/src/corelib/stream_utils.cpp
2881 --- ncbisrc/src/corelib/stream_utils.cpp 2008-04-11 09:30:22.000000000 -0700
2882 +++ ncbisrc2/src/corelib/stream_utils.cpp 2009-03-30 09:17:22.721115572 -0700
2883 @@ -1,3 +1,4 @@
2884 +#include <string.h>
2885 /* $Id: stream_utils.cpp 124339 2008-04-11 16:30:22Z ucko $
2886 * ===========================================================================
2887 *
2888 diff -ur ncbisrc/src/corelib/test/coretest.cpp ncbisrc2/src/corelib/test/coretest.cpp
2889 --- ncbisrc/src/corelib/test/coretest.cpp 2007-12-05 13:05:22.000000000 -0800
2890 +++ ncbisrc2/src/corelib/test/coretest.cpp 2009-03-30 09:17:22.737760877 -0700
2891 @@ -1,3 +1,4 @@
2892 +#include <string.h>
2893 /* $Id: coretest.cpp 115094 2007-12-05 21:05:22Z ucko $
2894 * ===========================================================================
2895 *
2896 diff -ur ncbisrc/src/corelib/test/pbacktest.cpp ncbisrc2/src/corelib/test/pbacktest.cpp
2897 --- ncbisrc/src/corelib/test/pbacktest.cpp 2008-02-04 07:11:23.000000000 -0800
2898 +++ ncbisrc2/src/corelib/test/pbacktest.cpp 2009-03-30 09:17:22.757781735 -0700
2899 @@ -1,3 +1,4 @@
2900 +#include <string.h>
2901 /* $Id: pbacktest.cpp 118921 2008-02-04 15:11:23Z lavr $
2902 * ===========================================================================
2903 *
2904 diff -ur ncbisrc/src/corelib/test/test_diag_parser.cpp ncbisrc2/src/corelib/test/test_diag_parser.cpp
2905 --- ncbisrc/src/corelib/test/test_diag_parser.cpp 2007-12-19 08:31:04.000000000 -0800
2906 +++ ncbisrc2/src/corelib/test/test_diag_parser.cpp 2009-03-30 09:17:22.724468824 -0700
2907 @@ -1,3 +1,4 @@
2908 +#include <string.h>
2909 /* $Id: test_diag_parser.cpp 115817 2007-12-19 16:31:04Z grichenk $
2910 * ===========================================================================
2911 *
2912 diff -ur ncbisrc/src/corelib/test/test_fstream_pushback.cpp ncbisrc2/src/corelib/test/test_fstream_pushback.cpp
2913 --- ncbisrc/src/corelib/test/test_fstream_pushback.cpp 2007-05-04 10:18:18.000000000 -0700
2914 +++ ncbisrc2/src/corelib/test/test_fstream_pushback.cpp 2009-03-30 14:00:01.178555171 -0700
2915 @@ -34,6 +34,7 @@
2916 #include "pbacktest.hpp"
2917 #include <corelib/ncbidiag.hpp>
2918 #include <stdio.h> // remove()
2919 +#include <stdlib.h>
2920
2921 #include <common/test_assert.h> /* This header must go last */
2922
2923 Only in ncbisrc2/src/corelib/test: test_fstream_pushback.cpp~
2924 diff -ur ncbisrc/src/corelib/test/test_ncbidiag_f_mt.cpp ncbisrc2/src/corelib/test/test_ncbidiag_f_mt.cpp
2925 --- ncbisrc/src/corelib/test/test_ncbidiag_f_mt.cpp 2007-05-04 10:18:18.000000000 -0700
2926 +++ ncbisrc2/src/corelib/test/test_ncbidiag_f_mt.cpp 2009-03-30 09:17:22.784509729 -0700
2927 @@ -1,3 +1,4 @@
2928 +#include <string.h>
2929 /* $Id: test_ncbidiag_f_mt.cpp 103491 2007-05-04 17:18:18Z kazimird $
2930 * ===========================================================================
2931 *
2932 diff -ur ncbisrc/src/corelib/test/test_ncbidiag_mt.cpp ncbisrc2/src/corelib/test/test_ncbidiag_mt.cpp
2933 --- ncbisrc/src/corelib/test/test_ncbidiag_mt.cpp 2008-03-11 07:54:32.000000000 -0700
2934 +++ ncbisrc2/src/corelib/test/test_ncbidiag_mt.cpp 2009-03-30 09:17:22.731095329 -0700
2935 @@ -1,3 +1,4 @@
2936 +#include <string.h>
2937 /* $Id: test_ncbidiag_mt.cpp 121709 2008-03-11 14:54:32Z vasilche $
2938 * ===========================================================================
2939 *
2940 diff -ur ncbisrc/src/corelib/test/test_ncbidiag_p.cpp ncbisrc2/src/corelib/test/test_ncbidiag_p.cpp
2941 --- ncbisrc/src/corelib/test/test_ncbidiag_p.cpp 2008-02-26 05:48:06.000000000 -0800
2942 +++ ncbisrc2/src/corelib/test/test_ncbidiag_p.cpp 2009-03-30 09:17:22.767781812 -0700
2943 @@ -1,3 +1,4 @@
2944 +#include <string.h>
2945 /* $Id: test_ncbidiag_p.cpp 120617 2008-02-26 13:48:06Z gouriano $
2946 * ===========================================================================
2947 *
2948 diff -ur ncbisrc/src/corelib/test/test_ncbiexec.cpp ncbisrc2/src/corelib/test/test_ncbiexec.cpp
2949 --- ncbisrc/src/corelib/test/test_ncbiexec.cpp 2007-08-07 06:05:09.000000000 -0700
2950 +++ ncbisrc2/src/corelib/test/test_ncbiexec.cpp 2009-03-30 09:17:22.734448822 -0700
2951 @@ -1,3 +1,4 @@
2952 +#include <string.h>
2953 /* $Id: test_ncbiexec.cpp 108348 2007-08-07 13:05:09Z ivanov $
2954 * ===========================================================================
2955 *
2956 diff -ur ncbisrc/src/corelib/test/test_ncbiexpt.cpp ncbisrc2/src/corelib/test/test_ncbiexpt.cpp
2957 --- ncbisrc/src/corelib/test/test_ncbiexpt.cpp 2007-06-13 13:11:11.000000000 -0700
2958 +++ ncbisrc2/src/corelib/test/test_ncbiexpt.cpp 2009-03-30 09:17:22.754508621 -0700
2959 @@ -1,3 +1,4 @@
2960 +#include <string.h>
2961 /* $Id: test_ncbiexpt.cpp 105617 2007-06-13 20:11:11Z ucko $
2962 * ===========================================================================
2963 *
2964 diff -ur ncbisrc/src/corelib/test/test_ncbifile.cpp ncbisrc2/src/corelib/test/test_ncbifile.cpp
2965 --- ncbisrc/src/corelib/test/test_ncbifile.cpp 2008-08-25 05:35:21.000000000 -0700
2966 +++ ncbisrc2/src/corelib/test/test_ncbifile.cpp 2009-03-30 09:17:22.777801822 -0700
2967 @@ -1,3 +1,4 @@
2968 +#include <string.h>
2969 /* $Id: test_ncbifile.cpp 138342 2008-08-25 12:35:21Z ivanov $
2970 * ===========================================================================
2971 *
2972 diff -ur ncbisrc/src/corelib/test/test_ncbireg_mt.cpp ncbisrc2/src/corelib/test/test_ncbireg_mt.cpp
2973 --- ncbisrc/src/corelib/test/test_ncbireg_mt.cpp 2008-09-10 10:23:29.000000000 -0700
2974 +++ ncbisrc2/src/corelib/test/test_ncbireg_mt.cpp 2009-03-30 09:17:22.764509582 -0700
2975 @@ -1,3 +1,4 @@
2976 +#include <string.h>
2977 /* $Id: test_ncbireg_mt.cpp 139899 2008-09-10 17:23:29Z camacho $
2978 * ===========================================================================
2979 *
2980 diff -ur ncbisrc/src/corelib/test/test_ncbistr.cpp ncbisrc2/src/corelib/test/test_ncbistr.cpp
2981 --- ncbisrc/src/corelib/test/test_ncbistr.cpp 2008-06-25 13:58:59.000000000 -0700
2982 +++ ncbisrc2/src/corelib/test/test_ncbistr.cpp 2009-03-30 09:17:22.751114901 -0700
2983 @@ -1,3 +1,4 @@
2984 +#include <string.h>
2985 /* $Id: test_ncbistr.cpp 132156 2008-06-25 20:58:59Z ivanovp $
2986 * ===========================================================================
2987 *
2988 diff -ur ncbisrc/src/corelib/test/test_ncbitime.cpp ncbisrc2/src/corelib/test/test_ncbitime.cpp
2989 --- ncbisrc/src/corelib/test/test_ncbitime.cpp 2008-09-10 08:29:49.000000000 -0700
2990 +++ ncbisrc2/src/corelib/test/test_ncbitime.cpp 2009-03-30 09:17:22.771114082 -0700
2991 @@ -1,3 +1,4 @@
2992 +#include <string.h>
2993 /* $Id: test_ncbitime.cpp 139875 2008-09-10 15:29:49Z ivanov $
2994 * ===========================================================================
2995 *
2996 diff -ur ncbisrc/src/corelib/test/test_ncbitime_mt.cpp ncbisrc2/src/corelib/test/test_ncbitime_mt.cpp
2997 --- ncbisrc/src/corelib/test/test_ncbitime_mt.cpp 2008-09-10 08:29:49.000000000 -0700
2998 +++ ncbisrc2/src/corelib/test/test_ncbitime_mt.cpp 2009-03-30 09:17:22.741094974 -0700
2999 @@ -1,3 +1,4 @@
3000 +#include <string.h>
3001 /* $Id: test_ncbitime_mt.cpp 139875 2008-09-10 15:29:49Z ivanov $
3002 * ===========================================================================
3003 *
3004 diff -ur ncbisrc/src/corelib/version.cpp ncbisrc2/src/corelib/version.cpp
3005 --- ncbisrc/src/corelib/version.cpp 2008-06-13 09:29:09.000000000 -0700
3006 +++ ncbisrc2/src/corelib/version.cpp 2009-03-30 09:17:22.847781436 -0700
3007 @@ -1,3 +1,4 @@
3008 +#include <string.h>
3009 /* $Id: version.cpp 130819 2008-06-13 16:29:09Z gouriano $
3010 * ===========================================================================
3011 *
3012 diff -ur ncbisrc/src/ctools/asn/asnio.cpp ncbisrc2/src/ctools/asn/asnio.cpp
3013 --- ncbisrc/src/ctools/asn/asnio.cpp 2007-05-04 10:18:18.000000000 -0700
3014 +++ ncbisrc2/src/ctools/asn/asnio.cpp 2009-03-30 09:17:24.318197674 -0700
3015 @@ -1,3 +1,4 @@
3016 +#include <string.h>
3017 /* $Id: asnio.cpp 103491 2007-05-04 17:18:18Z kazimird $
3018 * ===========================================================================
3019 *
3020 diff -ur ncbisrc/src/dbapi/cache/dbapi_blob_cache.cpp ncbisrc2/src/dbapi/cache/dbapi_blob_cache.cpp
3021 --- ncbisrc/src/dbapi/cache/dbapi_blob_cache.cpp 2008-05-01 15:02:41.000000000 -0700
3022 +++ ncbisrc2/src/dbapi/cache/dbapi_blob_cache.cpp 2009-03-30 09:17:22.854427837 -0700
3023 @@ -1,3 +1,4 @@
3024 +#include <string.h>
3025 /* $Id: dbapi_blob_cache.cpp 126496 2008-05-01 22:02:41Z ivanovp $
3026 * ===========================================================================
3027 *
3028 diff -ur ncbisrc/src/dbapi/cache/test/dbapi_cache_test.cpp ncbisrc2/src/dbapi/cache/test/dbapi_cache_test.cpp
3029 --- ncbisrc/src/dbapi/cache/test/dbapi_cache_test.cpp 2007-08-07 14:06:04.000000000 -0700
3030 +++ ncbisrc2/src/dbapi/cache/test/dbapi_cache_test.cpp 2009-03-30 09:17:22.864428132 -0700
3031 @@ -1,3 +1,4 @@
3032 +#include <string.h>
3033 /* $Id: dbapi_cache_test.cpp 108420 2007-08-07 21:06:04Z ssikorsk $
3034 * ===========================================================================
3035 *
3036 diff -ur ncbisrc/src/dbapi/conn_impl.cpp ncbisrc2/src/dbapi/conn_impl.cpp
3037 --- ncbisrc/src/dbapi/conn_impl.cpp 2008-09-17 14:57:26.000000000 -0700
3038 +++ ncbisrc2/src/dbapi/conn_impl.cpp 2009-03-30 09:17:23.457781132 -0700
3039 @@ -1,3 +1,4 @@
3040 +#include <string.h>
3041 /* $Id: conn_impl.cpp 140502 2008-09-17 21:57:26Z ssikorsk $
3042 * ===========================================================================
3043 *
3044 diff -ur ncbisrc/src/dbapi/driver/ctlib/bcp.cpp ncbisrc2/src/dbapi/driver/ctlib/bcp.cpp
3045 --- ncbisrc/src/dbapi/driver/ctlib/bcp.cpp 2008-09-16 07:31:40.000000000 -0700
3046 +++ ncbisrc2/src/dbapi/driver/ctlib/bcp.cpp 2009-03-30 09:17:22.917822200 -0700
3047 @@ -1,3 +1,4 @@
3048 +#include <string.h>
3049 /* $Id: bcp.cpp 140276 2008-09-16 14:31:40Z ssikorsk $
3050 * ===========================================================================
3051 *
3052 diff -ur ncbisrc/src/dbapi/driver/ctlib/connection.cpp ncbisrc2/src/dbapi/driver/ctlib/connection.cpp
3053 --- ncbisrc/src/dbapi/driver/ctlib/connection.cpp 2008-09-17 14:57:26.000000000 -0700
3054 +++ ncbisrc2/src/dbapi/driver/ctlib/connection.cpp 2009-03-30 09:17:22.934468613 -0700
3055 @@ -1,3 +1,4 @@
3056 +#include <string.h>
3057 /* $Id: connection.cpp 140502 2008-09-17 21:57:26Z ssikorsk $
3058 * ===========================================================================
3059 *
3060 diff -ur ncbisrc/src/dbapi/driver/ctlib/context.cpp ncbisrc2/src/dbapi/driver/ctlib/context.cpp
3061 --- ncbisrc/src/dbapi/driver/ctlib/context.cpp 2008-08-14 08:20:28.000000000 -0700
3062 +++ ncbisrc2/src/dbapi/driver/ctlib/context.cpp 2009-03-30 09:17:22.931114564 -0700
3063 @@ -1,3 +1,4 @@
3064 +#include <string.h>
3065 /* $Id: context.cpp 137345 2008-08-14 15:20:28Z ssikorsk $
3066 * ===========================================================================
3067 *
3068 diff -ur ncbisrc/src/dbapi/driver/ctlib/cursor.cpp ncbisrc2/src/dbapi/driver/ctlib/cursor.cpp
3069 --- ncbisrc/src/dbapi/driver/ctlib/cursor.cpp 2008-09-16 07:31:40.000000000 -0700
3070 +++ ncbisrc2/src/dbapi/driver/ctlib/cursor.cpp 2009-03-30 09:17:22.924407541 -0700
3071 @@ -1,3 +1,4 @@
3072 +#include <string.h>
3073 /* $Id: cursor.cpp 140276 2008-09-16 14:31:40Z ssikorsk $
3074 * ===========================================================================
3075 *
3076 diff -ur ncbisrc/src/dbapi/driver/ctlib/lang_cmd.cpp ncbisrc2/src/dbapi/driver/ctlib/lang_cmd.cpp
3077 --- ncbisrc/src/dbapi/driver/ctlib/lang_cmd.cpp 2008-07-24 09:05:21.000000000 -0700
3078 +++ ncbisrc2/src/dbapi/driver/ctlib/lang_cmd.cpp 2009-03-30 09:17:22.941074151 -0700
3079 @@ -1,3 +1,4 @@
3080 +#include <string.h>
3081 /* $Id: lang_cmd.cpp 135326 2008-07-24 16:05:21Z ssikorsk $
3082 * ===========================================================================
3083 *
3084 diff -ur ncbisrc/src/dbapi/driver/ctlib/result.cpp ncbisrc2/src/dbapi/driver/ctlib/result.cpp
3085 --- ncbisrc/src/dbapi/driver/ctlib/result.cpp 2008-06-03 09:05:48.000000000 -0700
3086 +++ ncbisrc2/src/dbapi/driver/ctlib/result.cpp 2009-03-30 09:17:22.921175523 -0700
3087 @@ -1,3 +1,4 @@
3088 +#include <string.h>
3089 /* $Id: result.cpp 129633 2008-06-03 16:05:48Z ssikorsk $
3090 * ===========================================================================
3091 *
3092 diff -ur ncbisrc/src/dbapi/driver/ctlib/rpc.cpp ncbisrc2/src/dbapi/driver/ctlib/rpc.cpp
3093 --- ncbisrc/src/dbapi/driver/ctlib/rpc.cpp 2008-06-10 12:13:01.000000000 -0700
3094 +++ ncbisrc2/src/dbapi/driver/ctlib/rpc.cpp 2009-03-30 09:17:22.911125211 -0700
3095 @@ -1,3 +1,4 @@
3096 +#include <string.h>
3097 /* $Id: rpc.cpp 130475 2008-06-10 19:13:01Z ssikorsk $
3098 * ===========================================================================
3099 *
3100 diff -ur ncbisrc/src/dbapi/driver/dblib/cursor.cpp ncbisrc2/src/dbapi/driver/dblib/cursor.cpp
3101 --- ncbisrc/src/dbapi/driver/dblib/cursor.cpp 2008-09-16 07:31:40.000000000 -0700
3102 +++ ncbisrc2/src/dbapi/driver/dblib/cursor.cpp 2009-03-30 09:17:22.904475157 -0700
3103 @@ -1,3 +1,4 @@
3104 +#include <string.h>
3105 /* $Id: cursor.cpp 140276 2008-09-16 14:31:40Z ssikorsk $
3106 * ===========================================================================
3107 *
3108 diff -ur ncbisrc/src/dbapi/driver/dblib/result.cpp ncbisrc2/src/dbapi/driver/dblib/result.cpp
3109 --- ncbisrc/src/dbapi/driver/dblib/result.cpp 2008-04-23 09:54:57.000000000 -0700
3110 +++ ncbisrc2/src/dbapi/driver/dblib/result.cpp 2009-03-30 09:17:22.901095779 -0700
3111 @@ -1,3 +1,4 @@
3112 +#include <string.h>
3113 /* $Id: result.cpp 125482 2008-04-23 16:54:57Z ssikorsk $
3114 * ===========================================================================
3115 *
3116 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/ctlib/blk.c ncbisrc2/src/dbapi/driver/ftds63/freetds/ctlib/blk.c
3117 --- ncbisrc/src/dbapi/driver/ftds63/freetds/ctlib/blk.c 2005-06-30 04:06:49.000000000 -0700
3118 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/ctlib/blk.c 2009-03-30 09:17:22.961095272 -0700
3119 @@ -1,3 +1,4 @@
3120 +#include <string.h>
3121 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3122 * Copyright (C) 1998-2004 Brian Bruns, Bill Thompson
3123 *
3124 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/ctlib/cs.c ncbisrc2/src/dbapi/driver/ftds63/freetds/ctlib/cs.c
3125 --- ncbisrc/src/dbapi/driver/ftds63/freetds/ctlib/cs.c 2005-06-30 04:06:49.000000000 -0700
3126 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/ctlib/cs.c 2009-03-30 09:17:22.974407265 -0700
3127 @@ -1,3 +1,4 @@
3128 +#include <string.h>
3129 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3130 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004 Brian Bruns
3131 *
3132 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/ctlib/ct.c ncbisrc2/src/dbapi/driver/ftds63/freetds/ctlib/ct.c
3133 --- ncbisrc/src/dbapi/driver/ftds63/freetds/ctlib/ct.c 2005-06-30 04:06:49.000000000 -0700
3134 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/ctlib/ct.c 2009-03-30 09:17:22.967760748 -0700
3135 @@ -1,3 +1,4 @@
3136 +#include <string.h>
3137 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3138 * Copyright (C) 1998, 1999, 2000, 2001 Brian Bruns
3139 * Copyright (C) 2002, 2003, 2004 James K. Lowden
3140 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/ctlib/ctutil.c ncbisrc2/src/dbapi/driver/ftds63/freetds/ctlib/ctutil.c
3141 --- ncbisrc/src/dbapi/driver/ftds63/freetds/ctlib/ctutil.c 2005-06-30 04:06:49.000000000 -0700
3142 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/ctlib/ctutil.c 2009-03-30 09:17:22.971135186 -0700
3143 @@ -1,3 +1,4 @@
3144 +#include <string.h>
3145 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3146 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004 Brian Bruns
3147 *
3148 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/dblib/bcp.c ncbisrc2/src/dbapi/driver/ftds63/freetds/dblib/bcp.c
3149 --- ncbisrc/src/dbapi/driver/ftds63/freetds/dblib/bcp.c 2005-12-06 11:38:12.000000000 -0800
3150 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/dblib/bcp.c 2009-03-30 09:17:22.947842763 -0700
3151 @@ -1,3 +1,4 @@
3152 +#include <string.h>
3153 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3154 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004 Brian Bruns
3155 *
3156 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/dblib/dblib.c ncbisrc2/src/dbapi/driver/ftds63/freetds/dblib/dblib.c
3157 --- ncbisrc/src/dbapi/driver/ftds63/freetds/dblib/dblib.c 2005-12-06 11:38:12.000000000 -0800
3158 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/dblib/dblib.c 2009-03-30 09:17:22.954489347 -0700
3159 @@ -1,3 +1,4 @@
3160 +#include <string.h>
3161 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3162 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004 Brian Bruns
3163 *
3164 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/dblib/rpc.c ncbisrc2/src/dbapi/driver/ftds63/freetds/dblib/rpc.c
3165 --- ncbisrc/src/dbapi/driver/ftds63/freetds/dblib/rpc.c 2005-12-06 11:38:12.000000000 -0800
3166 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/dblib/rpc.c 2009-03-30 09:17:22.957760950 -0700
3167 @@ -1,3 +1,4 @@
3168 +#include <string.h>
3169 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3170 * Copyright (C) 1998, 1999, 2000, 2001 Brian Bruns
3171 * Copyright (C) 2002, 2003, 2004 James K. Lowden
3172 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/replacements/iconv_win.c ncbisrc2/src/dbapi/driver/ftds63/freetds/replacements/iconv_win.c
3173 --- ncbisrc/src/dbapi/driver/ftds63/freetds/replacements/iconv_win.c 2005-07-08 05:24:27.000000000 -0700
3174 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/replacements/iconv_win.c 2009-03-30 09:17:23.094407439 -0700
3175 @@ -1,3 +1,4 @@
3176 +#include <string.h>
3177 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3178 * Copyright (C) 2003, 2004 James K. Lowden, based on original work by Brian Bruns
3179 *
3180 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/replacements/strtok_r.c ncbisrc2/src/dbapi/driver/ftds63/freetds/replacements/strtok_r.c
3181 --- ncbisrc/src/dbapi/driver/ftds63/freetds/replacements/strtok_r.c 2005-07-08 05:24:27.000000000 -0700
3182 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/replacements/strtok_r.c 2009-03-30 09:17:23.091155983 -0700
3183 @@ -1,3 +1,4 @@
3184 +#include <string.h>
3185 /*
3186 * strtok_r(3)
3187 * 20020927 entropy@tappedin.com
3188 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/replacements/vasprintf.c ncbisrc2/src/dbapi/driver/ftds63/freetds/replacements/vasprintf.c
3189 --- ncbisrc/src/dbapi/driver/ftds63/freetds/replacements/vasprintf.c 2005-07-08 05:24:27.000000000 -0700
3190 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/replacements/vasprintf.c 2009-03-30 09:17:23.087801503 -0700
3191 @@ -1,3 +1,4 @@
3192 +#include <string.h>
3193 /*
3194 * vasprintf(3)
3195 * 20020809 entropy@tappedin.com
3196 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/tds/challenge.c ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/challenge.c
3197 --- ncbisrc/src/dbapi/driver/ftds63/freetds/tds/challenge.c 2005-06-30 04:06:49.000000000 -0700
3198 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/challenge.c 2009-03-30 09:17:22.977740817 -0700
3199 @@ -1,3 +1,4 @@
3200 +#include <string.h>
3201 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3202 * Copyright (C) 1998-1999 Brian Bruns
3203 *
3204 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/tds/config.c ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/config.c
3205 --- ncbisrc/src/dbapi/driver/ftds63/freetds/tds/config.c 2005-07-07 12:02:32.000000000 -0700
3206 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/config.c 2009-03-30 09:17:23.034407728 -0700
3207 @@ -1,3 +1,4 @@
3208 +#include <string.h>
3209 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3210 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004 Brian Bruns
3211 *
3212 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/tds/convert.c ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/convert.c
3213 --- ncbisrc/src/dbapi/driver/ftds63/freetds/tds/convert.c 2005-12-06 11:38:12.000000000 -0800
3214 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/convert.c 2009-03-30 09:17:23.061094205 -0700
3215 @@ -1,3 +1,4 @@
3216 +#include <string.h>
3217 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3218 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004 Brian Bruns
3219 *
3220 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/tds/data.c ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/data.c
3221 --- ncbisrc/src/dbapi/driver/ftds63/freetds/tds/data.c 2005-06-30 04:06:49.000000000 -0700
3222 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/data.c 2009-03-30 09:17:22.997740426 -0700
3223 @@ -1,3 +1,4 @@
3224 +#include <string.h>
3225 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3226 * Copyright (C) 2003, 2004 Frediano Ziglio
3227 *
3228 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/tds/des.c ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/des.c
3229 --- ncbisrc/src/dbapi/driver/ftds63/freetds/tds/des.c 2005-06-30 04:06:49.000000000 -0700
3230 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/des.c 2009-03-30 09:17:22.984468510 -0700
3231 @@ -1,3 +1,4 @@
3232 +#include <string.h>
3233 /*
3234 * Copyright (C) 1998,1999,2000,2001 Nikos Mavroyanopoulos
3235 *
3236 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/tds/getmac.c ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/getmac.c
3237 --- ncbisrc/src/dbapi/driver/ftds63/freetds/tds/getmac.c 2005-06-30 04:06:49.000000000 -0700
3238 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/getmac.c 2009-03-30 09:17:23.041114646 -0700
3239 @@ -1,3 +1,4 @@
3240 +#include <string.h>
3241 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3242 * Copyright (C) 1998-2002 Brian Bruns
3243 *
3244 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/tds/iconv.c ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/iconv.c
3245 --- ncbisrc/src/dbapi/driver/ftds63/freetds/tds/iconv.c 2005-06-30 04:06:49.000000000 -0700
3246 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/iconv.c 2009-03-30 09:17:23.021155974 -0700
3247 @@ -1,3 +1,4 @@
3248 +#include <string.h>
3249 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3250 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004 Brian Bruns
3251 *
3252 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/tds/locale.c ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/locale.c
3253 --- ncbisrc/src/dbapi/driver/ftds63/freetds/tds/locale.c 2005-07-07 12:02:32.000000000 -0700
3254 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/locale.c 2009-03-30 09:17:23.064407071 -0700
3255 @@ -1,3 +1,4 @@
3256 +#include <string.h>
3257 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3258 * Copyright (C) 1998-1999 Brian Bruns
3259 *
3260 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/tds/login.c ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/login.c
3261 --- ncbisrc/src/dbapi/driver/ftds63/freetds/tds/login.c 2005-07-07 12:02:32.000000000 -0700
3262 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/login.c 2009-03-30 09:17:23.081073976 -0700
3263 @@ -1,3 +1,4 @@
3264 +#include <string.h>
3265 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3266 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004 Brian Bruns
3267 *
3268 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/tds/md4.c ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/md4.c
3269 --- ncbisrc/src/dbapi/driver/ftds63/freetds/tds/md4.c 2005-06-30 04:06:49.000000000 -0700
3270 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/md4.c 2009-03-30 09:17:23.027842673 -0700
3271 @@ -1,3 +1,4 @@
3272 +#include <string.h>
3273 /*
3274 * Copyright (C) 2001 Nikos Mavroyanopoulos
3275 *
3276 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/tds/md5.c ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/md5.c
3277 --- ncbisrc/src/dbapi/driver/ftds63/freetds/tds/md5.c 2005-06-30 04:06:49.000000000 -0700
3278 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/md5.c 2009-03-30 09:17:23.031114522 -0700
3279 @@ -1,3 +1,4 @@
3280 +#include <string.h>
3281 /*
3282 * This code implements the MD5 message-digest algorithm.
3283 * The algorithm is due to Ron Rivest. This code was
3284 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/tds/mem.c ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/mem.c
3285 --- ncbisrc/src/dbapi/driver/ftds63/freetds/tds/mem.c 2005-07-07 12:02:32.000000000 -0700
3286 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/mem.c 2009-03-30 09:17:23.044468298 -0700
3287 @@ -1,3 +1,4 @@
3288 +#include <string.h>
3289 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3290 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004 Brian Bruns
3291 *
3292 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/tds/numeric.c ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/numeric.c
3293 --- ncbisrc/src/dbapi/driver/ftds63/freetds/tds/numeric.c 2005-06-30 04:06:49.000000000 -0700
3294 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/numeric.c 2009-03-30 09:17:23.077801928 -0700
3295 @@ -1,3 +1,4 @@
3296 +#include <string.h>
3297 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3298 * Copyright (C) 1998-1999 Brian Bruns
3299 *
3300 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/tds/query.c ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/query.c
3301 --- ncbisrc/src/dbapi/driver/ftds63/freetds/tds/query.c 2005-12-06 11:38:12.000000000 -0800
3302 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/query.c 2009-03-30 09:17:23.017781547 -0700
3303 @@ -1,3 +1,4 @@
3304 +#include <string.h>
3305 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3306 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004 Brian Bruns
3307 *
3308 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/tds/read.c ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/read.c
3309 --- ncbisrc/src/dbapi/driver/ftds63/freetds/tds/read.c 2005-06-30 04:06:49.000000000 -0700
3310 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/read.c 2009-03-30 09:17:23.011135511 -0700
3311 @@ -1,3 +1,4 @@
3312 +#include <string.h>
3313 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3314 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004 Brian Bruns
3315 *
3316 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/tds/replacements.c ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/replacements.c
3317 --- ncbisrc/src/dbapi/driver/ftds63/freetds/tds/replacements.c 2007-03-05 12:41:55.000000000 -0800
3318 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/replacements.c 2009-03-30 09:17:23.057822560 -0700
3319 @@ -1,3 +1,4 @@
3320 +#include <string.h>
3321 /* $Id: replacements.c 99676 2007-03-05 20:41:55Z kazimird $
3322 * ===========================================================================
3323 *
3324 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/tds/tdsstring.c ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/tdsstring.c
3325 --- ncbisrc/src/dbapi/driver/ftds63/freetds/tds/tdsstring.c 2005-06-30 04:06:49.000000000 -0700
3326 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/tdsstring.c 2009-03-30 09:17:23.004469132 -0700
3327 @@ -1,3 +1,4 @@
3328 +#include <string.h>
3329 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3330 *
3331 * This library is free software; you can redistribute it and/or
3332 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/tds/threadsafe.c ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/threadsafe.c
3333 --- ncbisrc/src/dbapi/driver/ftds63/freetds/tds/threadsafe.c 2007-10-12 07:17:08.000000000 -0700
3334 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/threadsafe.c 2009-03-30 09:17:23.074468099 -0700
3335 @@ -1,3 +1,4 @@
3336 +#include <string.h>
3337 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3338 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004 Brian Bruns
3339 *
3340 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/tds/token.c ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/token.c
3341 --- ncbisrc/src/dbapi/driver/ftds63/freetds/tds/token.c 2005-10-27 06:20:30.000000000 -0700
3342 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/token.c 2009-03-30 09:17:23.071135827 -0700
3343 @@ -1,3 +1,4 @@
3344 +#include <string.h>
3345 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3346 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004 Brian Bruns
3347 *
3348 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/tds/util.c ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/util.c
3349 --- ncbisrc/src/dbapi/driver/ftds63/freetds/tds/util.c 2005-06-30 04:06:49.000000000 -0700
3350 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/util.c 2009-03-30 09:17:23.007802280 -0700
3351 @@ -1,3 +1,4 @@
3352 +#include <string.h>
3353 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3354 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004 Brian Bruns
3355 *
3356 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/tds/vstrbuild.c ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/vstrbuild.c
3357 --- ncbisrc/src/dbapi/driver/ftds63/freetds/tds/vstrbuild.c 2005-06-30 04:06:49.000000000 -0700
3358 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/vstrbuild.c 2009-03-30 09:17:23.047801754 -0700
3359 @@ -1,3 +1,4 @@
3360 +#include <string.h>
3361 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3362 * Copyright (C) 1998-1999 Brian Bruns
3363 *
3364 diff -ur ncbisrc/src/dbapi/driver/ftds63/freetds/tds/write.c ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/write.c
3365 --- ncbisrc/src/dbapi/driver/ftds63/freetds/tds/write.c 2005-12-06 11:38:12.000000000 -0800
3366 +++ ncbisrc2/src/dbapi/driver/ftds63/freetds/tds/write.c 2009-03-30 09:17:23.051115398 -0700
3367 @@ -1,3 +1,4 @@
3368 +#include <string.h>
3369 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3370 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004 Brian Bruns
3371 *
3372 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/ctlib/blk.c ncbisrc2/src/dbapi/driver/ftds64/freetds/ctlib/blk.c
3373 --- ncbisrc/src/dbapi/driver/ftds64/freetds/ctlib/blk.c 2008-08-06 09:24:47.000000000 -0700
3374 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/ctlib/blk.c 2009-03-30 09:17:23.111074604 -0700
3375 @@ -1,3 +1,4 @@
3376 +#include <string.h>
3377 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3378 * Copyright (C) 1998-2004, 2005 Brian Bruns, Bill Thompson
3379 *
3380 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/ctlib/cs.c ncbisrc2/src/dbapi/driver/ftds64/freetds/ctlib/cs.c
3381 --- ncbisrc/src/dbapi/driver/ftds64/freetds/ctlib/cs.c 2008-03-28 09:39:27.000000000 -0700
3382 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/ctlib/cs.c 2009-03-30 09:17:23.124468965 -0700
3383 @@ -1,3 +1,4 @@
3384 +#include <string.h>
3385 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3386 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004, 2005 Brian Bruns
3387 *
3388 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/ctlib/ct.c ncbisrc2/src/dbapi/driver/ftds64/freetds/ctlib/ct.c
3389 --- ncbisrc/src/dbapi/driver/ftds64/freetds/ctlib/ct.c 2008-06-05 11:26:44.000000000 -0700
3390 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/ctlib/ct.c 2009-03-30 09:17:23.117822673 -0700
3391 @@ -1,3 +1,4 @@
3392 +#include <string.h>
3393 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3394 * Copyright (C) 1998, 1999, 2000, 2001 Brian Bruns
3395 * Copyright (C) 2002, 2003, 2004, 2005 James K. Lowden
3396 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/ctlib/ctutil.c ncbisrc2/src/dbapi/driver/ftds64/freetds/ctlib/ctutil.c
3397 --- ncbisrc/src/dbapi/driver/ftds64/freetds/ctlib/ctutil.c 2007-09-18 15:58:46.000000000 -0700
3398 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/ctlib/ctutil.c 2009-03-30 09:17:23.121114207 -0700
3399 @@ -1,3 +1,4 @@
3400 +#include <string.h>
3401 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3402 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004 Brian Bruns
3403 *
3404 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/dblib/bcp.c ncbisrc2/src/dbapi/driver/ftds64/freetds/dblib/bcp.c
3405 --- ncbisrc/src/dbapi/driver/ftds64/freetds/dblib/bcp.c 2007-12-18 09:02:11.000000000 -0800
3406 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/dblib/bcp.c 2009-03-30 09:17:23.097782183 -0700
3407 @@ -1,3 +1,4 @@
3408 +#include <string.h>
3409 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3410 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004, 2005 Brian Bruns
3411 *
3412 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/dblib/buffering.h ncbisrc2/src/dbapi/driver/ftds64/freetds/dblib/buffering.h
3413 --- ncbisrc/src/dbapi/driver/ftds64/freetds/dblib/buffering.h 2007-05-04 10:18:18.000000000 -0700
3414 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/dblib/buffering.h 2009-03-30 09:20:01.196891390 -0700
3415 @@ -1,3 +1,5 @@
3416 +#include <string.h>
3417 +
3418 typedef struct dblib_buffer_row {
3419 /** pointer to result informations */
3420 TDSRESULTINFO *resinfo;
3421 Only in ncbisrc2/src/dbapi/driver/ftds64/freetds/dblib: buffering.h~
3422 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/dblib/dblib.c ncbisrc2/src/dbapi/driver/ftds64/freetds/dblib/dblib.c
3423 --- ncbisrc/src/dbapi/driver/ftds64/freetds/dblib/dblib.c 2007-12-21 10:02:52.000000000 -0800
3424 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/dblib/dblib.c 2009-03-30 09:17:23.104418669 -0700
3425 @@ -1,3 +1,4 @@
3426 +#include <string.h>
3427 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3428 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004, 2005 Brian Bruns
3429 *
3430 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/dblib/rpc.c ncbisrc2/src/dbapi/driver/ftds64/freetds/dblib/rpc.c
3431 --- ncbisrc/src/dbapi/driver/ftds64/freetds/dblib/rpc.c 2006-07-31 08:44:10.000000000 -0700
3432 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/dblib/rpc.c 2009-03-30 09:17:23.107791428 -0700
3433 @@ -1,3 +1,4 @@
3434 +#include <string.h>
3435 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3436 * Copyright (C) 1998, 1999, 2000, 2001 Brian Bruns
3437 * Copyright (C) 2002, 2003, 2004, 2005 James K. Lowden
3438 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/odbc/connectparams.c ncbisrc2/src/dbapi/driver/ftds64/freetds/odbc/connectparams.c
3439 --- ncbisrc/src/dbapi/driver/ftds64/freetds/odbc/connectparams.c 2006-10-12 08:45:50.000000000 -0700
3440 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/odbc/connectparams.c 2009-03-30 09:17:23.244488189 -0700
3441 @@ -1,3 +1,4 @@
3442 +#include <string.h>
3443 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3444 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004, 2005 Brian Bruns
3445 * Copyright (C) 2005 Frediano Ziglio
3446 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/odbc/convert_tds2sql.c ncbisrc2/src/dbapi/driver/ftds64/freetds/odbc/convert_tds2sql.c
3447 --- ncbisrc/src/dbapi/driver/ftds64/freetds/odbc/convert_tds2sql.c 2006-07-31 08:44:10.000000000 -0700
3448 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/odbc/convert_tds2sql.c 2009-03-30 09:17:23.261155184 -0700
3449 @@ -1,3 +1,4 @@
3450 +#include <string.h>
3451 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3452 * Copyright (C) 1998-1999 Brian Bruns
3453 * Copyright (C) 2003-2005 Frediano Ziglio
3454 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/odbc/descriptor.c ncbisrc2/src/dbapi/driver/ftds64/freetds/odbc/descriptor.c
3455 --- ncbisrc/src/dbapi/driver/ftds64/freetds/odbc/descriptor.c 2006-07-31 08:44:10.000000000 -0700
3456 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/odbc/descriptor.c 2009-03-30 09:17:23.264407468 -0700
3457 @@ -1,3 +1,4 @@
3458 +#include <string.h>
3459 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3460 * Copyright (C) 2003 Steve Murphree
3461 * Copyright (C) 2004, 2005 Ziglio Frediano
3462 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/odbc/error.c ncbisrc2/src/dbapi/driver/ftds64/freetds/odbc/error.c
3463 --- ncbisrc/src/dbapi/driver/ftds64/freetds/odbc/error.c 2006-07-31 08:44:10.000000000 -0700
3464 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/odbc/error.c 2009-03-30 09:17:23.274469079 -0700
3465 @@ -1,3 +1,4 @@
3466 +#include <string.h>
3467 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3468 * Copyright (C) 1998-1999 Brian Bruns
3469 * Copyright (C) 2003, 2004, 2005 Frediano Ziglio
3470 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/odbc/native.c ncbisrc2/src/dbapi/driver/ftds64/freetds/odbc/native.c
3471 --- ncbisrc/src/dbapi/driver/ftds64/freetds/odbc/native.c 2006-07-31 08:44:10.000000000 -0700
3472 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/odbc/native.c 2009-03-30 09:17:23.257822826 -0700
3473 @@ -1,3 +1,4 @@
3474 +#include <string.h>
3475 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3476 * Copyright (C) 1998-2002 Brian Bruns
3477 * Copyright (C) 2004, 2005 Frediano Ziglio
3478 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/odbc/odbc.c ncbisrc2/src/dbapi/driver/ftds64/freetds/odbc/odbc.c
3479 --- ncbisrc/src/dbapi/driver/ftds64/freetds/odbc/odbc.c 2006-08-21 11:12:21.000000000 -0700
3480 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/odbc/odbc.c 2009-03-30 09:17:23.271114502 -0700
3481 @@ -1,3 +1,4 @@
3482 +#include <string.h>
3483 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3484 * Copyright (C) 1998, 1999, 2000, 2001 Brian Bruns
3485 * Copyright (C) 2002, 2003, 2004, 2005, 2006 Frediano Ziglio
3486 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/odbc/odbc_checks.c ncbisrc2/src/dbapi/driver/ftds64/freetds/odbc/odbc_checks.c
3487 --- ncbisrc/src/dbapi/driver/ftds64/freetds/odbc/odbc_checks.c 2006-07-31 08:44:10.000000000 -0700
3488 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/odbc/odbc_checks.c 2009-03-30 09:17:23.247781768 -0700
3489 @@ -1,3 +1,4 @@
3490 +#include <string.h>
3491 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3492 * Copyright (C) 2003, 2004, 2005 Frediano Ziglio
3493 *
3494 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/odbc/odbc_util.c ncbisrc2/src/dbapi/driver/ftds64/freetds/odbc/odbc_util.c
3495 --- ncbisrc/src/dbapi/driver/ftds64/freetds/odbc/odbc_util.c 2006-07-31 08:44:10.000000000 -0700
3496 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/odbc/odbc_util.c 2009-03-30 09:17:23.277781144 -0700
3497 @@ -1,3 +1,4 @@
3498 +#include <string.h>
3499 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3500 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004, 2005 Brian Bruns
3501 * Copyright (C) 2005, 2006 Frediano Ziglio
3502 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/odbc/prepare_query.c ncbisrc2/src/dbapi/driver/ftds64/freetds/odbc/prepare_query.c
3503 --- ncbisrc/src/dbapi/driver/ftds64/freetds/odbc/prepare_query.c 2006-07-31 08:44:10.000000000 -0700
3504 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/odbc/prepare_query.c 2009-03-30 09:17:23.281074768 -0700
3505 @@ -1,3 +1,4 @@
3506 +#include <string.h>
3507 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3508 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004 Brian Bruns
3509 * Copyright (C) 2005 Frediano Ziglio
3510 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/odbc/sql2tds.c ncbisrc2/src/dbapi/driver/ftds64/freetds/odbc/sql2tds.c
3511 --- ncbisrc/src/dbapi/driver/ftds64/freetds/odbc/sql2tds.c 2006-07-31 08:44:10.000000000 -0700
3512 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/odbc/sql2tds.c 2009-03-30 09:17:23.251094411 -0700
3513 @@ -1,3 +1,4 @@
3514 +#include <string.h>
3515 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3516 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004, 2005 Brian Bruns
3517 * Copyright (C) 2005 Frediano Ziglio
3518 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/replacements/basename.c ncbisrc2/src/dbapi/driver/ftds64/freetds/replacements/basename.c
3519 --- ncbisrc/src/dbapi/driver/ftds64/freetds/replacements/basename.c 2006-07-31 10:56:58.000000000 -0700
3520 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/replacements/basename.c 2009-03-30 09:17:23.287822773 -0700
3521 @@ -1,3 +1,4 @@
3522 +#include <string.h>
3523 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3524 * Copyright (C) 2005 Ziglio Frediano
3525 *
3526 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/replacements/iconv.c ncbisrc2/src/dbapi/driver/ftds64/freetds/replacements/iconv.c
3527 --- ncbisrc/src/dbapi/driver/ftds64/freetds/replacements/iconv.c 2006-07-31 10:56:58.000000000 -0700
3528 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/replacements/iconv.c 2009-03-30 09:17:23.291135533 -0700
3529 @@ -1,3 +1,4 @@
3530 +#include <string.h>
3531 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3532 * Copyright (C) 2003, 2004 James K. Lowden, based on original work by Brian Bruns
3533 *
3534 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/replacements/readpassphrase.c ncbisrc2/src/dbapi/driver/ftds64/freetds/replacements/readpassphrase.c
3535 --- ncbisrc/src/dbapi/driver/ftds64/freetds/replacements/readpassphrase.c 2006-07-31 08:44:10.000000000 -0700
3536 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/replacements/readpassphrase.c 2009-03-30 09:17:23.297781411 -0700
3537 @@ -1,3 +1,4 @@
3538 +#include <string.h>
3539 /* OPENBSD ORIGINAL: lib/libc/gen/readpassphrase.c */
3540
3541 /* $OpenBSD: readpassphrase.c,v 1.16 2003/06/17 21:56:23 millert Exp $ */
3542 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/replacements/strlcat.c ncbisrc2/src/dbapi/driver/ftds64/freetds/replacements/strlcat.c
3543 --- ncbisrc/src/dbapi/driver/ftds64/freetds/replacements/strlcat.c 2006-07-31 08:44:10.000000000 -0700
3544 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/replacements/strlcat.c 2009-03-30 09:17:23.301135789 -0700
3545 @@ -1,3 +1,4 @@
3546 +#include <string.h>
3547 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3548 * Copyright (C) 2005 Ziglio Frediano
3549 *
3550 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/replacements/strlcpy.c ncbisrc2/src/dbapi/driver/ftds64/freetds/replacements/strlcpy.c
3551 --- ncbisrc/src/dbapi/driver/ftds64/freetds/replacements/strlcpy.c 2006-07-31 08:44:10.000000000 -0700
3552 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/replacements/strlcpy.c 2009-03-30 09:17:23.304428037 -0700
3553 @@ -1,3 +1,4 @@
3554 +#include <string.h>
3555 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3556 * Copyright (C) 2005 Ziglio Frediano
3557 *
3558 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/replacements/strtok_r.c ncbisrc2/src/dbapi/driver/ftds64/freetds/replacements/strtok_r.c
3559 --- ncbisrc/src/dbapi/driver/ftds64/freetds/replacements/strtok_r.c 2006-07-31 10:56:58.000000000 -0700
3560 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/replacements/strtok_r.c 2009-03-30 09:17:23.314448699 -0700
3561 @@ -1,3 +1,4 @@
3562 +#include <string.h>
3563 /*
3564 * strtok_r(3)
3565 * 20020927 entropy@tappedin.com
3566 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/replacements/vasprintf.c ncbisrc2/src/dbapi/driver/ftds64/freetds/replacements/vasprintf.c
3567 --- ncbisrc/src/dbapi/driver/ftds64/freetds/replacements/vasprintf.c 2006-07-31 10:56:58.000000000 -0700
3568 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/replacements/vasprintf.c 2009-03-30 09:17:23.307822244 -0700
3569 @@ -1,3 +1,4 @@
3570 +#include <string.h>
3571 /*
3572 * vasprintf(3)
3573 * 20020809 entropy@tappedin.com
3574 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/tds/challenge.c ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/challenge.c
3575 --- ncbisrc/src/dbapi/driver/ftds64/freetds/tds/challenge.c 2007-01-10 09:20:03.000000000 -0800
3576 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/challenge.c 2009-03-30 09:17:23.131115436 -0700
3577 @@ -1,3 +1,4 @@
3578 +#include <string.h>
3579 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3580 * Copyright (C) 1998-1999 Brian Bruns
3581 * Copyright (C) 2005 Frediano Ziglio
3582 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/tds/config.c ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/config.c
3583 --- ncbisrc/src/dbapi/driver/ftds64/freetds/tds/config.c 2008-03-26 14:16:10.000000000 -0700
3584 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/config.c 2009-03-30 09:17:23.181137810 -0700
3585 @@ -1,3 +1,4 @@
3586 +#include <string.h>
3587 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3588 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004, 2005 Brian Bruns
3589 *
3590 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/tds/convert.c ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/convert.c
3591 --- ncbisrc/src/dbapi/driver/ftds64/freetds/tds/convert.c 2006-07-31 08:44:10.000000000 -0700
3592 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/convert.c 2009-03-30 09:17:23.211156026 -0700
3593 @@ -1,3 +1,4 @@
3594 +#include <string.h>
3595 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3596 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004, 2005 Brian Bruns
3597 *
3598 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/tds/data.c ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/data.c
3599 --- ncbisrc/src/dbapi/driver/ftds64/freetds/tds/data.c 2008-06-09 11:12:00.000000000 -0700
3600 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/data.c 2009-03-30 09:17:23.141134915 -0700
3601 @@ -1,3 +1,4 @@
3602 +#include <string.h>
3603 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3604 * Copyright (C) 2003, 2004, 2005 Frediano Ziglio
3605 *
3606 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/tds/des.c ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/des.c
3607 --- ncbisrc/src/dbapi/driver/ftds64/freetds/tds/des.c 2006-07-31 08:44:10.000000000 -0700
3608 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/des.c 2009-03-30 09:17:23.134488191 -0700
3609 @@ -1,3 +1,4 @@
3610 +#include <string.h>
3611 /*
3612 * Copyright (C) 1998,1999,2000,2001 Nikos Mavroyanopoulos
3613 *
3614 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/tds/getmac.c ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/getmac.c
3615 --- ncbisrc/src/dbapi/driver/ftds64/freetds/tds/getmac.c 2006-07-31 08:44:10.000000000 -0700
3616 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/getmac.c 2009-03-30 09:17:23.184407283 -0700
3617 @@ -1,3 +1,4 @@
3618 +#include <string.h>
3619 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3620 * Copyright (C) 1998-2002 Brian Bruns
3621 *
3622 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/tds/hmac_md5.c ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/hmac_md5.c
3623 --- ncbisrc/src/dbapi/driver/ftds64/freetds/tds/hmac_md5.c 2007-01-10 09:20:31.000000000 -0800
3624 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/hmac_md5.c 2009-03-30 09:17:23.234448108 -0700
3625 @@ -1,3 +1,4 @@
3626 +#include <string.h>
3627 /* $Id: hmac_md5.c 96665 2007-01-10 17:20:31Z ssikorsk $ */
3628
3629 #include "tds.h"
3630 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/tds/iconv.c ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/iconv.c
3631 --- ncbisrc/src/dbapi/driver/ftds64/freetds/tds/iconv.c 2006-10-12 08:14:13.000000000 -0700
3632 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/iconv.c 2009-03-30 09:17:23.167761875 -0700
3633 @@ -1,3 +1,4 @@
3634 +#include <string.h>
3635 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3636 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004, 2005 Brian Bruns
3637 *
3638 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/tds/locale.c ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/locale.c
3639 --- ncbisrc/src/dbapi/driver/ftds64/freetds/tds/locale.c 2006-07-31 08:44:10.000000000 -0700
3640 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/locale.c 2009-03-30 09:17:23.214427382 -0700
3641 @@ -1,3 +1,4 @@
3642 +#include <string.h>
3643 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3644 * Copyright (C) 1998-1999 Brian Bruns
3645 * Copyright (C) 2005 Frediano Ziglio
3646 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/tds/login.c ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/login.c
3647 --- ncbisrc/src/dbapi/driver/ftds64/freetds/tds/login.c 2008-06-23 07:03:46.000000000 -0700
3648 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/login.c 2009-03-30 09:17:23.241155872 -0700
3649 @@ -1,3 +1,4 @@
3650 +#include <string.h>
3651 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3652 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004, 2005 Brian Bruns
3653 * Copyright (C) 2005 Ziglio Frediano
3654 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/tds/md4.c ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/md4.c
3655 --- ncbisrc/src/dbapi/driver/ftds64/freetds/tds/md4.c 2006-07-31 08:44:10.000000000 -0700
3656 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/md4.c 2009-03-30 09:17:23.174468770 -0700
3657 @@ -1,3 +1,4 @@
3658 +#include <string.h>
3659 /*
3660 * Copyright (C) 2001 Nikos Mavroyanopoulos
3661 *
3662 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/tds/md5.c ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/md5.c
3663 --- ncbisrc/src/dbapi/driver/ftds64/freetds/tds/md5.c 2006-10-10 08:18:56.000000000 -0700
3664 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/md5.c 2009-03-30 09:17:23.177740648 -0700
3665 @@ -1,3 +1,4 @@
3666 +#include <string.h>
3667 /*
3668 * This code implements the MD5 message-digest algorithm.
3669 * The algorithm is due to Ron Rivest. This code was
3670 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/tds/mem.c ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/mem.c
3671 --- ncbisrc/src/dbapi/driver/ftds64/freetds/tds/mem.c 2008-06-23 07:03:46.000000000 -0700
3672 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/mem.c 2009-03-30 09:17:23.191175237 -0700
3673 @@ -1,3 +1,4 @@
3674 +#include <string.h>
3675 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3676 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004, 2005 Brian Bruns
3677 * Copyright (C) 2005 Frediano Ziglio
3678 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/tds/net.c ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/net.c
3679 --- ncbisrc/src/dbapi/driver/ftds64/freetds/tds/net.c 2008-06-23 07:03:46.000000000 -0700
3680 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/net.c 2009-03-30 09:17:23.151095037 -0700
3681 @@ -1,3 +1,4 @@
3682 +#include <string.h>
3683 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3684 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003 Brian Bruns
3685 * Copyright (C) 2004, 2005 Ziglio Frediano
3686 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/tds/numeric.c ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/numeric.c
3687 --- ncbisrc/src/dbapi/driver/ftds64/freetds/tds/numeric.c 2006-10-12 08:14:13.000000000 -0700
3688 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/numeric.c 2009-03-30 09:17:23.227801794 -0700
3689 @@ -1,3 +1,4 @@
3690 +#include <string.h>
3691 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3692 * Copyright (C) 1998-1999 Brian Bruns
3693 * Copyright (C) 2005 Frediano Ziglio
3694 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/tds/query.c ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/query.c
3695 --- ncbisrc/src/dbapi/driver/ftds64/freetds/tds/query.c 2008-06-09 11:12:00.000000000 -0700
3696 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/query.c 2009-03-30 09:17:23.164447964 -0700
3697 @@ -1,3 +1,4 @@
3698 +#include <string.h>
3699 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3700 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004, 2005 Brian Bruns
3701 *
3702 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/tds/read.c ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/read.c
3703 --- ncbisrc/src/dbapi/driver/ftds64/freetds/tds/read.c 2006-10-12 08:14:13.000000000 -0700
3704 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/read.c 2009-03-30 09:17:23.157781364 -0700
3705 @@ -1,3 +1,4 @@
3706 +#include <string.h>
3707 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3708 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004 Brian Bruns
3709 * Copyright (C) 2005 Frediano Ziglio
3710 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/tds/replacements.c ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/replacements.c
3711 --- ncbisrc/src/dbapi/driver/ftds64/freetds/tds/replacements.c 2007-03-05 12:41:55.000000000 -0800
3712 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/replacements.c 2009-03-30 09:17:23.207781485 -0700
3713 @@ -1,3 +1,4 @@
3714 +#include <string.h>
3715 /* $Id: replacements.c 99676 2007-03-05 20:41:55Z kazimird $
3716 * ===========================================================================
3717 *
3718 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/tds/tds_checks.c ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/tds_checks.c
3719 --- ncbisrc/src/dbapi/driver/ftds64/freetds/tds/tds_checks.c 2008-04-03 05:33:27.000000000 -0700
3720 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/tds_checks.c 2009-03-30 09:17:23.137781928 -0700
3721 @@ -1,3 +1,4 @@
3722 +#include <string.h>
3723 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3724 * Copyright (C) 2004, 2005 Frediano Ziglio
3725 *
3726 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/tds/tdsstring.c ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/tdsstring.c
3727 --- ncbisrc/src/dbapi/driver/ftds64/freetds/tds/tdsstring.c 2006-10-12 08:14:13.000000000 -0700
3728 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/tdsstring.c 2009-03-30 09:17:23.147760927 -0700
3729 @@ -1,3 +1,4 @@
3730 +#include <string.h>
3731 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3732 * Copyright (C) 2004-2005 Frediano Ziglio
3733 *
3734 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/tds/threadsafe.c ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/threadsafe.c
3735 --- ncbisrc/src/dbapi/driver/ftds64/freetds/tds/threadsafe.c 2007-10-12 07:17:08.000000000 -0700
3736 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/threadsafe.c 2009-03-30 09:17:23.224407486 -0700
3737 @@ -1,3 +1,4 @@
3738 +#include <string.h>
3739 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3740 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004 Brian Bruns
3741 * Copyright (C) 2005 Frediano Ziglio
3742 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/tds/token.c ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/token.c
3743 --- ncbisrc/src/dbapi/driver/ftds64/freetds/tds/token.c 2008-04-03 05:33:27.000000000 -0700
3744 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/token.c 2009-03-30 09:17:23.217761958 -0700
3745 @@ -1,3 +1,4 @@
3746 +#include <string.h>
3747 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3748 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004, 2005 Brian Bruns
3749 * Copyright (C) 2005 Frediano Ziglio
3750 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/tds/util.c ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/util.c
3751 --- ncbisrc/src/dbapi/driver/ftds64/freetds/tds/util.c 2008-04-10 13:40:43.000000000 -0700
3752 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/util.c 2009-03-30 09:17:23.154448043 -0700
3753 @@ -1,3 +1,4 @@
3754 +#include <string.h>
3755 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3756 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004, 2005 Brian Bruns
3757 *
3758 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/tds/vstrbuild.c ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/vstrbuild.c
3759 --- ncbisrc/src/dbapi/driver/ftds64/freetds/tds/vstrbuild.c 2006-07-31 08:44:10.000000000 -0700
3760 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/vstrbuild.c 2009-03-30 09:17:23.197781677 -0700
3761 @@ -1,3 +1,4 @@
3762 +#include <string.h>
3763 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3764 * Copyright (C) 1998-1999 Brian Bruns
3765 *
3766 diff -ur ncbisrc/src/dbapi/driver/ftds64/freetds/tds/write.c ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/write.c
3767 --- ncbisrc/src/dbapi/driver/ftds64/freetds/tds/write.c 2006-07-31 08:44:10.000000000 -0700
3768 +++ ncbisrc2/src/dbapi/driver/ftds64/freetds/tds/write.c 2009-03-30 09:17:23.201094384 -0700
3769 @@ -1,3 +1,4 @@
3770 +#include <string.h>
3771 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3772 * Copyright (C) 1998, 1999, 2000, 2001, 2002, 2003, 2004 Brian Bruns
3773 * Copyright (C) 2005 Frediano Ziglio
3774 diff -ur ncbisrc/src/dbapi/driver/ftds8/cursor.cpp ncbisrc2/src/dbapi/driver/ftds8/cursor.cpp
3775 --- ncbisrc/src/dbapi/driver/ftds8/cursor.cpp 2008-09-16 07:31:40.000000000 -0700
3776 +++ ncbisrc2/src/dbapi/driver/ftds8/cursor.cpp 2009-03-30 09:17:23.411115494 -0700
3777 @@ -1,3 +1,4 @@
3778 +#include <string.h>
3779 /* $Id: cursor.cpp 140276 2008-09-16 14:31:40Z ssikorsk $
3780 * ===========================================================================
3781 *
3782 diff -ur ncbisrc/src/dbapi/driver/ftds8/freetds/ctlib/cs.c ncbisrc2/src/dbapi/driver/ftds8/freetds/ctlib/cs.c
3783 --- ncbisrc/src/dbapi/driver/ftds8/freetds/ctlib/cs.c 2003-11-14 14:56:25.000000000 -0800
3784 +++ ncbisrc2/src/dbapi/driver/ftds8/freetds/ctlib/cs.c 2009-03-30 09:17:23.344468554 -0700
3785 @@ -1,3 +1,4 @@
3786 +#include <string.h>
3787 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3788 * Copyright (C) 1998-1999 Brian Bruns
3789 *
3790 diff -ur ncbisrc/src/dbapi/driver/ftds8/freetds/ctlib/ct.c ncbisrc2/src/dbapi/driver/ftds8/freetds/ctlib/ct.c
3791 --- ncbisrc/src/dbapi/driver/ftds8/freetds/ctlib/ct.c 2004-12-14 12:46:24.000000000 -0800
3792 +++ ncbisrc2/src/dbapi/driver/ftds8/freetds/ctlib/ct.c 2009-03-30 09:17:23.334447854 -0700
3793 @@ -1,3 +1,4 @@
3794 +#include <string.h>
3795 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3796 * Copyright (C) 1998-1999 Brian Bruns
3797 *
3798 diff -ur ncbisrc/src/dbapi/driver/ftds8/freetds/ctlib/ctutil.c ncbisrc2/src/dbapi/driver/ftds8/freetds/ctlib/ctutil.c
3799 --- ncbisrc/src/dbapi/driver/ftds8/freetds/ctlib/ctutil.c 2002-12-05 14:47:03.000000000 -0800
3800 +++ ncbisrc2/src/dbapi/driver/ftds8/freetds/ctlib/ctutil.c 2009-03-30 09:17:23.341095431 -0700
3801 @@ -1,3 +1,4 @@
3802 +#include <string.h>
3803 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3804 * Copyright (C) 1998-1999 Brian Bruns
3805 *
3806 diff -ur ncbisrc/src/dbapi/driver/ftds8/freetds/dblib/bcp.c ncbisrc2/src/dbapi/driver/ftds8/freetds/dblib/bcp.c
3807 --- ncbisrc/src/dbapi/driver/ftds8/freetds/dblib/bcp.c 2007-12-21 10:02:52.000000000 -0800
3808 +++ ncbisrc2/src/dbapi/driver/ftds8/freetds/dblib/bcp.c 2009-03-30 09:17:23.327826165 -0700
3809 @@ -1,3 +1,4 @@
3810 +#include <string.h>
3811 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3812 * Copyright (C) 1998-1999 Brian Bruns
3813 *
3814 diff -ur ncbisrc/src/dbapi/driver/ftds8/freetds/dblib/dblib.c ncbisrc2/src/dbapi/driver/ftds8/freetds/dblib/dblib.c
3815 --- ncbisrc/src/dbapi/driver/ftds8/freetds/dblib/dblib.c 2007-12-21 10:02:52.000000000 -0800
3816 +++ ncbisrc2/src/dbapi/driver/ftds8/freetds/dblib/dblib.c 2009-03-30 09:17:23.331164580 -0700
3817 @@ -1,3 +1,4 @@
3818 +#include <string.h>
3819 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3820 * Copyright (C) 1998-1999 Brian Bruns
3821 *
3822 diff -ur ncbisrc/src/dbapi/driver/ftds8/freetds/tds/asprintf.c ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/asprintf.c
3823 --- ncbisrc/src/dbapi/driver/ftds8/freetds/tds/asprintf.c 2004-12-14 12:46:24.000000000 -0800
3824 +++ ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/asprintf.c 2009-03-30 09:17:23.354489344 -0700
3825 @@ -1,3 +1,4 @@
3826 +#include <string.h>
3827 /*
3828 * vasprintf(3), asprintf(3)
3829 * 20020809 entropy@tappedin.com
3830 diff -ur ncbisrc/src/dbapi/driver/ftds8/freetds/tds/challenge.c ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/challenge.c
3831 --- ncbisrc/src/dbapi/driver/ftds8/freetds/tds/challenge.c 2005-06-03 10:05:34.000000000 -0700
3832 +++ ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/challenge.c 2009-03-30 09:17:23.347801356 -0700
3833 @@ -1,3 +1,4 @@
3834 +#include <string.h>
3835 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3836 * Copyright (C) 1998-1999 Brian Bruns
3837 *
3838 diff -ur ncbisrc/src/dbapi/driver/ftds8/freetds/tds/config.c ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/config.c
3839 --- ncbisrc/src/dbapi/driver/ftds8/freetds/tds/config.c 2008-02-29 12:58:52.000000000 -0800
3840 +++ ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/config.c 2009-03-30 09:17:23.374427511 -0700
3841 @@ -1,3 +1,4 @@
3842 +#include <string.h>
3843 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3844 * Copyright (C) 1998-1999 Brian Bruns
3845 *
3846 diff -ur ncbisrc/src/dbapi/driver/ftds8/freetds/tds/convert.c ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/convert.c
3847 --- ncbisrc/src/dbapi/driver/ftds8/freetds/tds/convert.c 2008-08-20 08:17:35.000000000 -0700
3848 +++ ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/convert.c 2009-03-30 09:17:23.387802288 -0700
3849 @@ -1,3 +1,4 @@
3850 +#include <string.h>
3851 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3852 * Copyright (C) 1998-1999 Brian Bruns
3853 *
3854 diff -ur ncbisrc/src/dbapi/driver/ftds8/freetds/tds/iconv.c ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/iconv.c
3855 --- ncbisrc/src/dbapi/driver/ftds8/freetds/tds/iconv.c 2003-01-30 12:34:24.000000000 -0800
3856 +++ ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/iconv.c 2009-03-30 09:17:23.371156013 -0700
3857 @@ -1,3 +1,4 @@
3858 +#include <string.h>
3859 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3860 * Copyright (C) 1998-1999 Brian Bruns
3861 *
3862 diff -ur ncbisrc/src/dbapi/driver/ftds8/freetds/tds/locale.c ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/locale.c
3863 --- ncbisrc/src/dbapi/driver/ftds8/freetds/tds/locale.c 2004-12-14 12:46:24.000000000 -0800
3864 +++ ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/locale.c 2009-03-30 09:17:23.391094384 -0700
3865 @@ -1,3 +1,4 @@
3866 +#include <string.h>
3867 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3868 * Copyright (C) 1998-1999 Brian Bruns
3869 *
3870 diff -ur ncbisrc/src/dbapi/driver/ftds8/freetds/tds/login.c ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/login.c
3871 --- ncbisrc/src/dbapi/driver/ftds8/freetds/tds/login.c 2007-07-16 08:52:52.000000000 -0700
3872 +++ ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/login.c 2009-03-30 09:17:23.407740463 -0700
3873 @@ -1,3 +1,4 @@
3874 +#include <string.h>
3875 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3876 * Copyright (C) 1998-1999 Brian Bruns
3877 *
3878 diff -ur ncbisrc/src/dbapi/driver/ftds8/freetds/tds/mem.c ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/mem.c
3879 --- ncbisrc/src/dbapi/driver/ftds8/freetds/tds/mem.c 2006-03-15 13:16:18.000000000 -0800
3880 +++ ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/mem.c 2009-03-30 09:17:23.377762073 -0700
3881 @@ -1,3 +1,4 @@
3882 +#include <string.h>
3883 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3884 * Copyright (C) 1998-1999 Brian Bruns
3885 *
3886 diff -ur ncbisrc/src/dbapi/driver/ftds8/freetds/tds/numeric.c ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/numeric.c
3887 --- ncbisrc/src/dbapi/driver/ftds8/freetds/tds/numeric.c 2002-12-05 14:47:03.000000000 -0800
3888 +++ ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/numeric.c 2009-03-30 09:17:23.404427592 -0700
3889 @@ -1,3 +1,4 @@
3890 +#include <string.h>
3891 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3892 * Copyright (C) 1998-1999 Brian Bruns
3893 *
3894 diff -ur ncbisrc/src/dbapi/driver/ftds8/freetds/tds/query.c ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/query.c
3895 --- ncbisrc/src/dbapi/driver/ftds8/freetds/tds/query.c 2002-12-05 14:47:03.000000000 -0800
3896 +++ ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/query.c 2009-03-30 09:17:23.364488627 -0700
3897 @@ -1,3 +1,4 @@
3898 +#include <string.h>
3899 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3900 * Copyright (C) 1998-1999 Brian Bruns
3901 *
3902 diff -ur ncbisrc/src/dbapi/driver/ftds8/freetds/tds/read.c ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/read.c
3903 --- ncbisrc/src/dbapi/driver/ftds8/freetds/tds/read.c 2008-01-14 11:45:08.000000000 -0800
3904 +++ ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/read.c 2009-03-30 09:17:23.361095224 -0700
3905 @@ -1,3 +1,4 @@
3906 +#include <string.h>
3907 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3908 * Copyright (C) 1998-1999 Brian Bruns
3909 *
3910 diff -ur ncbisrc/src/dbapi/driver/ftds8/freetds/tds/threadsafe.c ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/threadsafe.c
3911 --- ncbisrc/src/dbapi/driver/ftds8/freetds/tds/threadsafe.c 2008-08-20 08:17:35.000000000 -0700
3912 +++ ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/threadsafe.c 2009-03-30 09:17:23.401156324 -0700
3913 @@ -1,3 +1,4 @@
3914 +#include <string.h>
3915 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3916 * Copyright (C) 1998-2002 Brian Bruns
3917 *
3918 diff -ur ncbisrc/src/dbapi/driver/ftds8/freetds/tds/token.c ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/token.c
3919 --- ncbisrc/src/dbapi/driver/ftds8/freetds/tds/token.c 2008-01-07 14:43:15.000000000 -0800
3920 +++ ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/token.c 2009-03-30 09:17:23.394448271 -0700
3921 @@ -1,3 +1,4 @@
3922 +#include <string.h>
3923 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3924 * Copyright (C) 1998-1999 Brian Bruns
3925 *
3926 diff -ur ncbisrc/src/dbapi/driver/ftds8/freetds/tds/util.c ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/util.c
3927 --- ncbisrc/src/dbapi/driver/ftds8/freetds/tds/util.c 2007-12-21 10:02:52.000000000 -0800
3928 +++ ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/util.c 2009-03-30 09:17:23.357761020 -0700
3929 @@ -1,3 +1,4 @@
3930 +#include <string.h>
3931 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3932 * Copyright (C) 1998-1999 Brian Bruns
3933 *
3934 diff -ur ncbisrc/src/dbapi/driver/ftds8/freetds/tds/write.c ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/write.c
3935 --- ncbisrc/src/dbapi/driver/ftds8/freetds/tds/write.c 2006-03-15 13:16:18.000000000 -0800
3936 +++ ncbisrc2/src/dbapi/driver/ftds8/freetds/tds/write.c 2009-03-30 09:17:23.384448051 -0700
3937 @@ -1,3 +1,4 @@
3938 +#include <string.h>
3939 /* FreeTDS - Library of routines accessing Sybase and Microsoft databases
3940 * Copyright (C) 1998-1999 Brian Bruns
3941 *
3942 diff -ur ncbisrc/src/dbapi/driver/ftds8/result.cpp ncbisrc2/src/dbapi/driver/ftds8/result.cpp
3943 --- ncbisrc/src/dbapi/driver/ftds8/result.cpp 2008-04-23 09:54:57.000000000 -0700
3944 +++ ncbisrc2/src/dbapi/driver/ftds8/result.cpp 2009-03-30 09:17:23.321095198 -0700
3945 @@ -1,3 +1,4 @@
3946 +#include <string.h>
3947 /* $Id: result.cpp 125482 2008-04-23 16:54:57Z ssikorsk $
3948 * ===========================================================================
3949 *
3950 diff -ur ncbisrc/src/dbapi/driver/memory_store.cpp ncbisrc2/src/dbapi/driver/memory_store.cpp
3951 --- ncbisrc/src/dbapi/driver/memory_store.cpp 2007-10-18 15:40:59.000000000 -0700
3952 +++ ncbisrc2/src/dbapi/driver/memory_store.cpp 2009-03-30 09:17:23.417802324 -0700
3953 @@ -1,3 +1,4 @@
3954 +#include <string.h>
3955 /* $Id: memory_store.cpp 112520 2007-10-18 22:40:59Z ivanovp $
3956 * ===========================================================================
3957 *
3958 diff -ur ncbisrc/src/dbapi/driver/mysql/samples/mysql_lang.cpp ncbisrc2/src/dbapi/driver/mysql/samples/mysql_lang.cpp
3959 --- ncbisrc/src/dbapi/driver/mysql/samples/mysql_lang.cpp 2007-10-29 07:54:11.000000000 -0700
3960 +++ ncbisrc2/src/dbapi/driver/mysql/samples/mysql_lang.cpp 2009-03-30 09:17:23.317761012 -0700
3961 @@ -1,3 +1,4 @@
3962 +#include <string.h>
3963 /* $Id: mysql_lang.cpp 113034 2007-10-29 14:54:11Z ssikorsk $
3964 * ===========================================================================
3965 *
3966 diff -ur ncbisrc/src/dbapi/driver/ncbi_win_hook.cpp ncbisrc2/src/dbapi/driver/ncbi_win_hook.cpp
3967 --- ncbisrc/src/dbapi/driver/ncbi_win_hook.cpp 2008-05-05 14:45:09.000000000 -0700
3968 +++ ncbisrc2/src/dbapi/driver/ncbi_win_hook.cpp 2009-03-30 09:17:22.894468715 -0700
3969 @@ -1,3 +1,4 @@
3970 +#include <string.h>
3971 /* $Id: ncbi_win_hook.cpp 126806 2008-05-05 21:45:09Z ssikorsk $
3972 * ===========================================================================
3973 *
3974 diff -ur ncbisrc/src/dbapi/driver/numeric_convert.cpp ncbisrc2/src/dbapi/driver/numeric_convert.cpp
3975 --- ncbisrc/src/dbapi/driver/numeric_convert.cpp 2007-05-04 10:18:18.000000000 -0700
3976 +++ ncbisrc2/src/dbapi/driver/numeric_convert.cpp 2009-03-30 09:17:22.907802347 -0700
3977 @@ -1,3 +1,4 @@
3978 +#include <string.h>
3979 /* $Id: numeric_convert.cpp 103491 2007-05-04 17:18:18Z kazimird $
3980 * ===========================================================================
3981 *
3982 diff -ur ncbisrc/src/dbapi/driver/odbc/bcp.cpp ncbisrc2/src/dbapi/driver/odbc/bcp.cpp
3983 --- ncbisrc/src/dbapi/driver/odbc/bcp.cpp 2008-09-16 07:31:40.000000000 -0700
3984 +++ ncbisrc2/src/dbapi/driver/odbc/bcp.cpp 2009-03-30 09:17:23.424407328 -0700
3985 @@ -1,3 +1,4 @@
3986 +#include <string.h>
3987 /* $Id: bcp.cpp 140276 2008-09-16 14:31:40Z ssikorsk $
3988 * ===========================================================================
3989 *
3990 diff -ur ncbisrc/src/dbapi/driver/odbc/connection.cpp ncbisrc2/src/dbapi/driver/odbc/connection.cpp
3991 --- ncbisrc/src/dbapi/driver/odbc/connection.cpp 2008-09-17 14:57:26.000000000 -0700
3992 +++ ncbisrc2/src/dbapi/driver/odbc/connection.cpp 2009-03-30 09:17:23.437801975 -0700
3993 @@ -1,3 +1,4 @@
3994 +#include <string.h>
3995 /* $Id: connection.cpp 140502 2008-09-17 21:57:26Z ssikorsk $
3996 * ===========================================================================
3997 *
3998 diff -ur ncbisrc/src/dbapi/driver/odbc/context.cpp ncbisrc2/src/dbapi/driver/odbc/context.cpp
3999 --- ncbisrc/src/dbapi/driver/odbc/context.cpp 2008-08-14 08:20:28.000000000 -0700
4000 +++ ncbisrc2/src/dbapi/driver/odbc/context.cpp 2009-03-30 09:17:23.434407146 -0700
4001 @@ -1,3 +1,4 @@
4002 +#include <string.h>
4003 /* $Id: context.cpp 137345 2008-08-14 15:20:28Z ssikorsk $
4004 * ===========================================================================
4005 *
4006 diff -ur ncbisrc/src/dbapi/driver/odbc/odbc_utils.hpp ncbisrc2/src/dbapi/driver/odbc/odbc_utils.hpp
4007 --- ncbisrc/src/dbapi/driver/odbc/odbc_utils.hpp 2008-04-07 12:40:42.000000000 -0700
4008 +++ ncbisrc2/src/dbapi/driver/odbc/odbc_utils.hpp 2009-03-30 09:20:21.563556718 -0700
4009 @@ -33,6 +33,7 @@
4010 */
4011
4012 #include <dbapi/driver/impl/dbapi_driver_utils.hpp>
4013 +#include <string.h>
4014
4015 #ifdef NCBI_OS_MSWIN
4016 #include <windows.h>
4017 Only in ncbisrc2/src/dbapi/driver/odbc: odbc_utils.hpp~
4018 diff -ur ncbisrc/src/dbapi/driver/odbc/result.cpp ncbisrc2/src/dbapi/driver/odbc/result.cpp
4019 --- ncbisrc/src/dbapi/driver/odbc/result.cpp 2008-04-23 09:54:57.000000000 -0700
4020 +++ ncbisrc2/src/dbapi/driver/odbc/result.cpp 2009-03-30 09:17:23.431114697 -0700
4021 @@ -1,3 +1,4 @@
4022 +#include <string.h>
4023 /* $Id: result.cpp 125482 2008-04-23 16:54:57Z ssikorsk $
4024 * ===========================================================================
4025 *
4026 diff -ur ncbisrc/src/dbapi/driver/odbc/rpc.cpp ncbisrc2/src/dbapi/driver/odbc/rpc.cpp
4027 --- ncbisrc/src/dbapi/driver/odbc/rpc.cpp 2008-01-28 12:30:19.000000000 -0800
4028 +++ ncbisrc2/src/dbapi/driver/odbc/rpc.cpp 2009-03-30 09:17:23.421135248 -0700
4029 @@ -1,3 +1,4 @@
4030 +#include <string.h>
4031 /* $Id: rpc.cpp 118386 2008-01-28 20:30:19Z ssikorsk $
4032 * ===========================================================================
4033 *
4034 diff -ur ncbisrc/src/dbapi/driver/pointer_pot.cpp ncbisrc2/src/dbapi/driver/pointer_pot.cpp
4035 --- ncbisrc/src/dbapi/driver/pointer_pot.cpp 2007-05-04 10:18:18.000000000 -0700
4036 +++ ncbisrc2/src/dbapi/driver/pointer_pot.cpp 2009-03-30 09:17:22.944448686 -0700
4037 @@ -1,3 +1,4 @@
4038 +#include <string.h>
4039 /* $Id: pointer_pot.cpp 103491 2007-05-04 17:18:18Z kazimird $
4040 * ===========================================================================
4041 *
4042 diff -ur ncbisrc/src/dbapi/driver/sqlite3/samples/sqlite3_sample01.cpp ncbisrc2/src/dbapi/driver/sqlite3/samples/sqlite3_sample01.cpp
4043 --- ncbisrc/src/dbapi/driver/sqlite3/samples/sqlite3_sample01.cpp 2008-01-29 08:02:27.000000000 -0800
4044 +++ ncbisrc2/src/dbapi/driver/sqlite3/samples/sqlite3_sample01.cpp 2009-03-30 09:17:23.441073930 -0700
4045 @@ -1,3 +1,4 @@
4046 +#include <string.h>
4047 /* $Id: sqlite3_sample01.cpp 118438 2008-01-29 16:02:27Z ivanovp $
4048 * ===========================================================================
4049 *
4050 diff -ur ncbisrc/src/dbapi/driver/types.cpp ncbisrc2/src/dbapi/driver/types.cpp
4051 --- ncbisrc/src/dbapi/driver/types.cpp 2008-05-12 10:45:38.000000000 -0700
4052 +++ ncbisrc2/src/dbapi/driver/types.cpp 2009-03-30 09:17:23.444407167 -0700
4053 @@ -1,3 +1,4 @@
4054 +#include <string.h>
4055 /* $Id: types.cpp 127374 2008-05-12 17:45:38Z ivanovp $
4056 * ===========================================================================
4057 *
4058 diff -ur ncbisrc/src/dbapi/ds_impl.cpp ncbisrc2/src/dbapi/ds_impl.cpp
4059 --- ncbisrc/src/dbapi/ds_impl.cpp 2007-10-18 15:40:59.000000000 -0700
4060 +++ ncbisrc2/src/dbapi/ds_impl.cpp 2009-03-30 09:17:23.454469073 -0700
4061 @@ -1,3 +1,4 @@
4062 +#include <string.h>
4063 /* $Id: ds_impl.cpp 112520 2007-10-18 22:40:59Z ivanovp $
4064 * ===========================================================================
4065 *
4066 diff -ur ncbisrc/src/dbapi/lang_bind/python/python_ncbi_dbapi.cpp ncbisrc2/src/dbapi/lang_bind/python/python_ncbi_dbapi.cpp
4067 --- ncbisrc/src/dbapi/lang_bind/python/python_ncbi_dbapi.cpp 2008-09-02 09:18:36.000000000 -0700
4068 +++ ncbisrc2/src/dbapi/lang_bind/python/python_ncbi_dbapi.cpp 2009-03-30 09:17:23.451094234 -0700
4069 @@ -1,3 +1,4 @@
4070 +#include <string.h>
4071 /* $Id: python_ncbi_dbapi.cpp 139088 2008-09-02 16:18:36Z ssikorsk $
4072 * ===========================================================================
4073 *
4074 diff -ur ncbisrc/src/dbapi/test/dbapi_unit_test.cpp ncbisrc2/src/dbapi/test/dbapi_unit_test.cpp
4075 --- ncbisrc/src/dbapi/test/dbapi_unit_test.cpp 2008-09-19 11:38:34.000000000 -0700
4076 +++ ncbisrc2/src/dbapi/test/dbapi_unit_test.cpp 2009-03-30 09:17:22.884407383 -0700
4077 @@ -1,3 +1,4 @@
4078 +#include <string.h>
4079 /* $Id: dbapi_unit_test.cpp 140747 2008-09-19 18:38:34Z ssikorsk $
4080 * ===========================================================================
4081 *
4082 diff -ur ncbisrc/src/dbapi/test/dbapi_unit_test_cursor.cpp ncbisrc2/src/dbapi/test/dbapi_unit_test_cursor.cpp
4083 --- ncbisrc/src/dbapi/test/dbapi_unit_test_cursor.cpp 2008-08-13 11:51:26.000000000 -0700
4084 +++ ncbisrc2/src/dbapi/test/dbapi_unit_test_cursor.cpp 2009-03-30 09:17:22.881074767 -0700
4085 @@ -1,3 +1,4 @@
4086 +#include <string.h>
4087 /* $Id: dbapi_unit_test_cursor.cpp 137262 2008-08-13 18:51:26Z ivanovp $
4088 * ===========================================================================
4089 *
4090 diff -ur ncbisrc/src/dbapi/test/dbapi_unit_test_lob.cpp ncbisrc2/src/dbapi/test/dbapi_unit_test_lob.cpp
4091 --- ncbisrc/src/dbapi/test/dbapi_unit_test_lob.cpp 2008-09-08 07:31:23.000000000 -0700
4092 +++ ncbisrc2/src/dbapi/test/dbapi_unit_test_lob.cpp 2009-03-30 09:17:22.867822686 -0700
4093 @@ -1,3 +1,4 @@
4094 +#include <string.h>
4095 /* $Id: dbapi_unit_test_lob.cpp 139676 2008-09-08 14:31:23Z ssikorsk $
4096 * ===========================================================================
4097 *
4098 diff -ur ncbisrc/src/dbapi/test/dbapi_unit_test_object.cpp ncbisrc2/src/dbapi/test/dbapi_unit_test_object.cpp
4099 --- ncbisrc/src/dbapi/test/dbapi_unit_test_object.cpp 2008-08-13 11:51:26.000000000 -0700
4100 +++ ncbisrc2/src/dbapi/test/dbapi_unit_test_object.cpp 2009-03-30 09:17:22.871115350 -0700
4101 @@ -1,3 +1,4 @@
4102 +#include <string.h>
4103 /* $Id: dbapi_unit_test_object.cpp 137262 2008-08-13 18:51:26Z ivanovp $
4104 * ===========================================================================
4105 *
4106 diff -ur ncbisrc/src/dbapi/test/dbapi_unit_test_stmt.cpp ncbisrc2/src/dbapi/test/dbapi_unit_test_stmt.cpp
4107 --- ncbisrc/src/dbapi/test/dbapi_unit_test_stmt.cpp 2008-09-11 08:17:47.000000000 -0700
4108 +++ ncbisrc2/src/dbapi/test/dbapi_unit_test_stmt.cpp 2009-03-30 09:17:22.877771141 -0700
4109 @@ -1,3 +1,4 @@
4110 +#include <string.h>
4111 /* $Id: dbapi_unit_test_stmt.cpp 139972 2008-09-11 15:17:47Z ssikorsk $
4112 * ===========================================================================
4113 *
4114 diff -ur ncbisrc/src/dbapi/test/driver/dbapi_driver_test_ctlib.cpp ncbisrc2/src/dbapi/test/driver/dbapi_driver_test_ctlib.cpp
4115 --- ncbisrc/src/dbapi/test/driver/dbapi_driver_test_ctlib.cpp 2008-07-31 11:03:38.000000000 -0700
4116 +++ ncbisrc2/src/dbapi/test/driver/dbapi_driver_test_ctlib.cpp 2009-03-30 09:17:22.891094744 -0700
4117 @@ -1,3 +1,4 @@
4118 +#include <string.h>
4119 /* $Id: dbapi_driver_test_ctlib.cpp 136201 2008-07-31 18:03:38Z ssikorsk $
4120 * ===========================================================================
4121 *
4122 diff -ur ncbisrc/src/html/html.cpp ncbisrc2/src/html/html.cpp
4123 --- ncbisrc/src/html/html.cpp 2007-10-15 11:28:19.000000000 -0700
4124 +++ ncbisrc2/src/html/html.cpp 2009-03-30 09:17:24.301552149 -0700
4125 @@ -1,3 +1,4 @@
4126 +#include <string.h>
4127 /* $Id: html.cpp 112285 2007-10-15 18:28:19Z ivanovp $
4128 * ===========================================================================
4129 *
4130 diff -ur ncbisrc/src/html/htmlhelper.cpp ncbisrc2/src/html/htmlhelper.cpp
4131 --- ncbisrc/src/html/htmlhelper.cpp 2007-10-15 11:28:19.000000000 -0700
4132 +++ ncbisrc2/src/html/htmlhelper.cpp 2009-03-30 09:17:24.308197640 -0700
4133 @@ -1,3 +1,4 @@
4134 +#include <string.h>
4135 /* $Id: htmlhelper.cpp 112285 2007-10-15 18:28:19Z ivanovp $
4136 * ===========================================================================
4137 *
4138 diff -ur ncbisrc/src/html/indentstream.cpp ncbisrc2/src/html/indentstream.cpp
4139 --- ncbisrc/src/html/indentstream.cpp 2007-05-04 10:18:18.000000000 -0700
4140 +++ ncbisrc2/src/html/indentstream.cpp 2009-03-30 09:17:24.311552270 -0700
4141 @@ -1,3 +1,4 @@
4142 +#include <string.h>
4143 /* $Id: indentstream.cpp 103491 2007-05-04 17:18:18Z kazimird $
4144 * ===========================================================================
4145 *
4146 diff -ur ncbisrc/src/html/jsmenu.cpp ncbisrc2/src/html/jsmenu.cpp
4147 --- ncbisrc/src/html/jsmenu.cpp 2007-11-16 06:03:18.000000000 -0800
4148 +++ ncbisrc2/src/html/jsmenu.cpp 2009-03-30 09:17:24.314885418 -0700
4149 @@ -1,3 +1,4 @@
4150 +#include <string.h>
4151 /* $Id: jsmenu.cpp 114188 2007-11-16 14:03:18Z ivanov $
4152 * ===========================================================================
4153 *
4154 diff -ur ncbisrc/src/html/page.cpp ncbisrc2/src/html/page.cpp
4155 --- ncbisrc/src/html/page.cpp 2008-06-02 07:14:52.000000000 -0700
4156 +++ ncbisrc2/src/html/page.cpp 2009-03-30 09:17:24.298238517 -0700
4157 @@ -1,3 +1,4 @@
4158 +#include <string.h>
4159 /* $Id: page.cpp 129414 2008-06-02 14:14:52Z grichenk $
4160 * ===========================================================================
4161 *
4162 diff -ur ncbisrc/src/misc/cgi_redirect/redirect.cpp ncbisrc2/src/misc/cgi_redirect/redirect.cpp
4163 --- ncbisrc/src/misc/cgi_redirect/redirect.cpp 2007-10-15 11:28:19.000000000 -0700
4164 +++ ncbisrc2/src/misc/cgi_redirect/redirect.cpp 2009-03-30 09:17:23.771552496 -0700
4165 @@ -1,3 +1,4 @@
4166 +#include <string.h>
4167 /* $Id: redirect.cpp 112285 2007-10-15 18:28:19Z ivanovp $
4168 * ===========================================================================
4169 *
4170 diff -ur ncbisrc/src/misc/grid_cgi/cgi_session_netcache.cpp ncbisrc2/src/misc/grid_cgi/cgi_session_netcache.cpp
4171 --- ncbisrc/src/misc/grid_cgi/cgi_session_netcache.cpp 2008-01-16 06:08:35.000000000 -0800
4172 +++ ncbisrc2/src/misc/grid_cgi/cgi_session_netcache.cpp 2009-03-30 09:17:23.774865375 -0700
4173 @@ -1,3 +1,4 @@
4174 +#include <string.h>
4175 /* $Id: cgi_session_netcache.cpp 117450 2008-01-16 14:08:35Z kazimird $
4176 * ===========================================================================
4177 *
4178 diff -ur ncbisrc/src/objects/biblio/label_util.cpp ncbisrc2/src/objects/biblio/label_util.cpp
4179 --- ncbisrc/src/objects/biblio/label_util.cpp 2007-05-04 10:18:18.000000000 -0700
4180 +++ ncbisrc2/src/objects/biblio/label_util.cpp 2009-03-30 09:17:24.344925250 -0700
4181 @@ -1,3 +1,4 @@
4182 +#include <string.h>
4183 /*$Id: label_util.cpp 103491 2007-05-04 17:18:18Z kazimird $
4184 * ===========================================================================
4185 *
4186 diff -ur ncbisrc/src/objects/general/Date_std.cpp ncbisrc2/src/objects/general/Date_std.cpp
4187 --- ncbisrc/src/objects/general/Date_std.cpp 2007-05-04 10:18:18.000000000 -0700
4188 +++ ncbisrc2/src/objects/general/Date_std.cpp 2009-03-30 09:17:24.334955936 -0700
4189 @@ -1,3 +1,4 @@
4190 +#include <string.h>
4191 /* $Id: Date_std.cpp 103491 2007-05-04 17:18:18Z kazimird $
4192 * ===========================================================================
4193 *
4194 diff -ur ncbisrc/src/objects/id1/ID1server_back.cpp ncbisrc2/src/objects/id1/ID1server_back.cpp
4195 --- ncbisrc/src/objects/id1/ID1server_back.cpp 2007-05-04 10:18:18.000000000 -0700
4196 +++ ncbisrc2/src/objects/id1/ID1server_back.cpp 2009-03-30 09:17:24.341531472 -0700
4197 @@ -1,3 +1,4 @@
4198 +#include <string.h>
4199 /* $Id: ID1server_back.cpp 103491 2007-05-04 17:18:18Z kazimird $
4200 * ===========================================================================
4201 *
4202 diff -ur ncbisrc/src/objects/omssa/MSModSpecSet.cpp ncbisrc2/src/objects/omssa/MSModSpecSet.cpp
4203 --- ncbisrc/src/objects/omssa/MSModSpecSet.cpp 2008-08-18 12:34:43.000000000 -0700
4204 +++ ncbisrc2/src/objects/omssa/MSModSpecSet.cpp 2009-03-30 09:17:24.351530954 -0700
4205 @@ -1,3 +1,4 @@
4206 +#include <string.h>
4207 /* $Id: MSModSpecSet.cpp 137748 2008-08-18 19:34:43Z slottad $
4208 * ===========================================================================
4209 *
4210 diff -ur ncbisrc/src/objects/seq/Bioseq.cpp ncbisrc2/src/objects/seq/Bioseq.cpp
4211 --- ncbisrc/src/objects/seq/Bioseq.cpp 2008-09-08 13:21:01.000000000 -0700
4212 +++ ncbisrc2/src/objects/seq/Bioseq.cpp 2009-03-30 09:17:24.358177921 -0700
4213 @@ -1,3 +1,4 @@
4214 +#include <string.h>
4215 /* $Id: Bioseq.cpp 139754 2008-09-08 20:21:01Z kans $
4216 * ===========================================================================
4217 *
4218 diff -ur ncbisrc/src/objects/seq/Seq_data.cpp ncbisrc2/src/objects/seq/Seq_data.cpp
4219 --- ncbisrc/src/objects/seq/Seq_data.cpp 2007-05-04 10:18:18.000000000 -0700
4220 +++ ncbisrc2/src/objects/seq/Seq_data.cpp 2009-03-30 09:17:24.361552279 -0700
4221 @@ -1,3 +1,4 @@
4222 +#include <string.h>
4223 /* $Id: Seq_data.cpp 103491 2007-05-04 17:18:18Z kazimird $
4224 * ===========================================================================
4225 *
4226 diff -ur ncbisrc/src/objects/seq/seq_id_handle.cpp ncbisrc2/src/objects/seq/seq_id_handle.cpp
4227 --- ncbisrc/src/objects/seq/seq_id_handle.cpp 2007-10-18 12:20:16.000000000 -0700
4228 +++ ncbisrc2/src/objects/seq/seq_id_handle.cpp 2009-03-30 09:17:24.374845185 -0700
4229 @@ -1,3 +1,4 @@
4230 +#include <string.h>
4231 /* $Id: seq_id_handle.cpp 112496 2007-10-18 19:20:16Z vasilche $
4232 * ===========================================================================
4233 *
4234 diff -ur ncbisrc/src/objects/seq/seqport_util.cpp ncbisrc2/src/objects/seq/seqport_util.cpp
4235 --- ncbisrc/src/objects/seq/seqport_util.cpp 2007-05-04 10:18:18.000000000 -0700
4236 +++ ncbisrc2/src/objects/seq/seqport_util.cpp 2009-03-30 09:17:24.364905118 -0700
4237 @@ -1,3 +1,4 @@
4238 +#include <string.h>
4239 /*$Id: seqport_util.cpp 103491 2007-05-04 17:18:18Z kazimird $
4240 * ===========================================================================
4241 *
4242 diff -ur ncbisrc/src/objects/seq/unit_test/seq_id_unit_test.cpp ncbisrc2/src/objects/seq/unit_test/seq_id_unit_test.cpp
4243 --- ncbisrc/src/objects/seq/unit_test/seq_id_unit_test.cpp 2008-11-20 10:28:44.000000000 -0800
4244 +++ ncbisrc2/src/objects/seq/unit_test/seq_id_unit_test.cpp 2009-03-30 09:17:24.371531104 -0700
4245 @@ -1,3 +1,4 @@
4246 +#include <string.h>
4247 /* $Id: seq_id_unit_test.cpp 146151 2008-11-20 18:28:44Z ucko $
4248 * ===========================================================================
4249 *
4250 diff -ur ncbisrc/src/objects/seqfeat/Genetic_code_table.cpp ncbisrc2/src/objects/seqfeat/Genetic_code_table.cpp
4251 --- ncbisrc/src/objects/seqfeat/Genetic_code_table.cpp 2007-05-04 10:18:18.000000000 -0700
4252 +++ ncbisrc2/src/objects/seqfeat/Genetic_code_table.cpp 2009-03-30 09:17:24.384885414 -0700
4253 @@ -1,3 +1,4 @@
4254 +#include <string.h>
4255 /* $Id: Genetic_code_table.cpp 103491 2007-05-04 17:18:18Z kazimird $
4256 * ===========================================================================
4257 *
4258 diff -ur ncbisrc/src/objects/seqfeat/SeqFeatData.cpp ncbisrc2/src/objects/seqfeat/SeqFeatData.cpp
4259 --- ncbisrc/src/objects/seqfeat/SeqFeatData.cpp 2008-05-20 12:03:54.000000000 -0700
4260 +++ ncbisrc2/src/objects/seqfeat/SeqFeatData.cpp 2009-03-30 09:17:24.388278799 -0700
4261 @@ -1,3 +1,4 @@
4262 +#include <string.h>
4263 /* $Id: SeqFeatData.cpp 128132 2008-05-20 19:03:54Z grichenk $
4264 * ===========================================================================
4265 *
4266 diff -ur ncbisrc/src/objects/seqloc/Seq_id.cpp ncbisrc2/src/objects/seqloc/Seq_id.cpp
4267 --- ncbisrc/src/objects/seqloc/Seq_id.cpp 2008-11-24 11:49:35.000000000 -0800
4268 +++ ncbisrc2/src/objects/seqloc/Seq_id.cpp 2009-03-30 09:17:24.328177372 -0700
4269 @@ -1,3 +1,4 @@
4270 +#include <string.h>
4271 /* $Id: Seq_id.cpp 146328 2008-11-24 19:49:35Z ucko $
4272 * ===========================================================================
4273 *
4274 diff -ur ncbisrc/src/objects/seqloc/Seq_loc.cpp ncbisrc2/src/objects/seqloc/Seq_loc.cpp
4275 --- ncbisrc/src/objects/seqloc/Seq_loc.cpp 2008-07-15 11:31:13.000000000 -0700
4276 +++ ncbisrc2/src/objects/seqloc/Seq_loc.cpp 2009-03-30 09:17:24.331542251 -0700
4277 @@ -1,3 +1,4 @@
4278 +#include <string.h>
4279 /* $Id: Seq_loc.cpp 133966 2008-07-15 18:31:13Z ivanovp $
4280 * ===========================================================================
4281 *
4282 diff -ur ncbisrc/src/objects/seqset/Bioseq_set.cpp ncbisrc2/src/objects/seqset/Bioseq_set.cpp
4283 --- ncbisrc/src/objects/seqset/Bioseq_set.cpp 2008-06-30 11:10:18.000000000 -0700
4284 +++ ncbisrc2/src/objects/seqset/Bioseq_set.cpp 2009-03-30 09:17:24.324844957 -0700
4285 @@ -1,3 +1,4 @@
4286 +#include <string.h>
4287 /* $Id: Bioseq_set.cpp 132507 2008-06-30 18:10:18Z kans $
4288 * ===========================================================================
4289 *
4290 diff -ur ncbisrc/src/objects/taxon1/cache.cpp ncbisrc2/src/objects/taxon1/cache.cpp
4291 --- ncbisrc/src/objects/taxon1/cache.cpp 2007-05-04 10:18:18.000000000 -0700
4292 +++ ncbisrc2/src/objects/taxon1/cache.cpp 2009-03-30 09:17:24.378197768 -0700
4293 @@ -1,3 +1,4 @@
4294 +#include <string.h>
4295 /* $Id: cache.cpp 103491 2007-05-04 17:18:18Z kazimird $
4296 * ===========================================================================
4297 *
4298 diff -ur ncbisrc/src/objmgr/bioseq_info.cpp ncbisrc2/src/objmgr/bioseq_info.cpp
4299 --- ncbisrc/src/objmgr/bioseq_info.cpp 2007-12-11 10:11:03.000000000 -0800
4300 +++ ncbisrc2/src/objmgr/bioseq_info.cpp 2009-03-30 09:17:23.504570085 -0700
4301 @@ -1,3 +1,4 @@
4302 +#include <string.h>
4303 /* $Id: bioseq_info.cpp 115344 2007-12-11 18:11:03Z vasilche $
4304 * ===========================================================================
4305 *
4306 diff -ur ncbisrc/src/objmgr/data_source.cpp ncbisrc2/src/objmgr/data_source.cpp
4307 --- ncbisrc/src/objmgr/data_source.cpp 2008-05-21 09:24:51.000000000 -0700
4308 +++ ncbisrc2/src/objmgr/data_source.cpp 2009-03-30 09:17:23.484427630 -0700
4309 @@ -1,3 +1,4 @@
4310 +#include <string.h>
4311 /* $Id: data_source.cpp 128341 2008-05-21 16:24:51Z vasilche $
4312 * ===========================================================================
4313 *
4314 diff -ur ncbisrc/src/objmgr/scope_info.cpp ncbisrc2/src/objmgr/scope_info.cpp
4315 --- ncbisrc/src/objmgr/scope_info.cpp 2008-07-10 08:46:25.000000000 -0700
4316 +++ ncbisrc2/src/objmgr/scope_info.cpp 2009-03-30 09:17:23.471186170 -0700
4317 @@ -1,3 +1,4 @@
4318 +#include <string.h>
4319 /* $Id: scope_info.cpp 133443 2008-07-10 15:46:25Z vasilche $
4320 * ===========================================================================
4321 *
4322 diff -ur ncbisrc/src/objmgr/seq_annot_info.cpp ncbisrc2/src/objmgr/seq_annot_info.cpp
4323 --- ncbisrc/src/objmgr/seq_annot_info.cpp 2008-05-05 09:04:42.000000000 -0700
4324 +++ ncbisrc2/src/objmgr/seq_annot_info.cpp 2009-03-30 09:17:23.474417977 -0700
4325 @@ -1,3 +1,4 @@
4326 +#include <string.h>
4327 /* $Id: seq_annot_info.cpp 126740 2008-05-05 16:04:42Z vasilche $
4328 * ===========================================================================
4329 *
4330 diff -ur ncbisrc/src/objmgr/seq_vector_ci.cpp ncbisrc2/src/objmgr/seq_vector_ci.cpp
4331 --- ncbisrc/src/objmgr/seq_vector_ci.cpp 2008-04-18 14:14:39.000000000 -0700
4332 +++ ncbisrc2/src/objmgr/seq_vector_ci.cpp 2009-03-30 09:17:23.487802297 -0700
4333 @@ -1,3 +1,4 @@
4334 +#include <string.h>
4335 /* $Id: seq_vector_ci.cpp 125018 2008-04-18 21:14:39Z ucko $
4336 * ===========================================================================
4337 *
4338 diff -ur ncbisrc/src/objmgr/split/asn_sizer.cpp ncbisrc2/src/objmgr/split/asn_sizer.cpp
4339 --- ncbisrc/src/objmgr/split/asn_sizer.cpp 2007-05-04 10:18:18.000000000 -0700
4340 +++ ncbisrc2/src/objmgr/split/asn_sizer.cpp 2009-03-30 09:17:23.464448860 -0700
4341 @@ -1,3 +1,4 @@
4342 +#include <string.h>
4343 /* $Id: asn_sizer.cpp 103491 2007-05-04 17:18:18Z kazimird $
4344 * ===========================================================================
4345 *
4346 diff -ur ncbisrc/src/objmgr/split/blob_splitter_params.cpp ncbisrc2/src/objmgr/split/blob_splitter_params.cpp
4347 --- ncbisrc/src/objmgr/split/blob_splitter_params.cpp 2007-05-04 10:18:18.000000000 -0700
4348 +++ ncbisrc2/src/objmgr/split/blob_splitter_params.cpp 2009-03-30 09:17:23.467821741 -0700
4349 @@ -1,3 +1,4 @@
4350 +#include <string.h>
4351 /* $Id: blob_splitter_params.cpp 103491 2007-05-04 17:18:18Z kazimird $
4352 * ===========================================================================
4353 *
4354 diff -ur ncbisrc/src/objmgr/test/test_objmgr_sv.cpp ncbisrc2/src/objmgr/test/test_objmgr_sv.cpp
4355 --- ncbisrc/src/objmgr/test/test_objmgr_sv.cpp 2007-09-27 12:33:30.000000000 -0700
4356 +++ ncbisrc2/src/objmgr/test/test_objmgr_sv.cpp 2009-03-30 09:17:23.491094490 -0700
4357 @@ -1,3 +1,4 @@
4358 +#include <string.h>
4359 /* $Id: test_objmgr_sv.cpp 111423 2007-09-27 19:33:30Z vasilche $
4360 * ===========================================================================
4361 *
4362 diff -ur ncbisrc/src/objmgr/util/create_defline.cpp ncbisrc2/src/objmgr/util/create_defline.cpp
4363 --- ncbisrc/src/objmgr/util/create_defline.cpp 2008-09-17 13:56:47.000000000 -0700
4364 +++ ncbisrc2/src/objmgr/util/create_defline.cpp 2009-03-30 09:17:23.501094454 -0700
4365 @@ -1,3 +1,4 @@
4366 +#include <string.h>
4367 /*
4368 * ===========================================================================
4369 *
4370 diff -ur ncbisrc/src/objmgr/util/seqtitle.cpp ncbisrc2/src/objmgr/util/seqtitle.cpp
4371 --- ncbisrc/src/objmgr/util/seqtitle.cpp 2008-05-23 12:54:17.000000000 -0700
4372 +++ ncbisrc2/src/objmgr/util/seqtitle.cpp 2009-03-30 09:17:23.497802678 -0700
4373 @@ -1,3 +1,4 @@
4374 +#include <string.h>
4375 /* $Id: seqtitle.cpp 128747 2008-05-23 19:54:17Z ucko $
4376 * ===========================================================================
4377 *
4378 diff -ur ncbisrc/src/objtools/align/alngraphic.cpp ncbisrc2/src/objtools/align/alngraphic.cpp
4379 --- ncbisrc/src/objtools/align/alngraphic.cpp 2007-05-04 10:18:18.000000000 -0700
4380 +++ ncbisrc2/src/objtools/align/alngraphic.cpp 2009-03-30 09:17:22.621135851 -0700
4381 @@ -1,3 +1,4 @@
4382 +#include <string.h>
4383 /* $Id: alngraphic.cpp 103491 2007-05-04 17:18:18Z kazimird $
4384 * ===========================================================================
4385 *
4386 diff -ur ncbisrc/src/objtools/alnmgr/alnvec.cpp ncbisrc2/src/objtools/alnmgr/alnvec.cpp
4387 --- ncbisrc/src/objtools/alnmgr/alnvec.cpp 2007-05-04 10:18:18.000000000 -0700
4388 +++ ncbisrc2/src/objtools/alnmgr/alnvec.cpp 2009-03-30 09:17:22.497761473 -0700
4389 @@ -1,3 +1,4 @@
4390 +#include <string.h>
4391 /* $Id: alnvec.cpp 103491 2007-05-04 17:18:18Z kazimird $
4392 * ===========================================================================
4393 *
4394 diff -ur ncbisrc/src/objtools/alnmgr/alnvecprint.cpp ncbisrc2/src/objtools/alnmgr/alnvecprint.cpp
4395 --- ncbisrc/src/objtools/alnmgr/alnvecprint.cpp 2007-05-04 10:18:18.000000000 -0700
4396 +++ ncbisrc2/src/objtools/alnmgr/alnvecprint.cpp 2009-03-30 09:17:22.504488942 -0700
4397 @@ -1,3 +1,4 @@
4398 +#include <string.h>
4399 /* $Id: alnvecprint.cpp 103491 2007-05-04 17:18:18Z kazimird $
4400 * ===========================================================================
4401 *
4402 diff -ur ncbisrc/src/objtools/asniotest/asniotest.cpp ncbisrc2/src/objtools/asniotest/asniotest.cpp
4403 --- ncbisrc/src/objtools/asniotest/asniotest.cpp 2007-10-12 14:23:59.000000000 -0700
4404 +++ ncbisrc2/src/objtools/asniotest/asniotest.cpp 2009-03-30 09:17:22.617781651 -0700
4405 @@ -1,3 +1,4 @@
4406 +#include <string.h>
4407 /* $Id: asniotest.cpp 112232 2007-10-12 21:23:59Z thiessen $
4408 * ===========================================================================
4409 *
4410 diff -ur ncbisrc/src/objtools/blast/gene_info_reader/gene_info_reader.cpp ncbisrc2/src/objtools/blast/gene_info_reader/gene_info_reader.cpp
4411 --- ncbisrc/src/objtools/blast/gene_info_reader/gene_info_reader.cpp 2008-09-22 11:25:56.000000000 -0700
4412 +++ ncbisrc2/src/objtools/blast/gene_info_reader/gene_info_reader.cpp 2009-03-30 09:17:22.557822117 -0700
4413 @@ -1,3 +1,4 @@
4414 +#include <string.h>
4415 /* $Id: gene_info_reader.cpp 140909 2008-09-22 18:25:56Z ucko $
4416 * ===========================================================================
4417 *
4418 diff -ur ncbisrc/src/objtools/blast/seqdb_reader/seqdbalias.cpp ncbisrc2/src/objtools/blast/seqdb_reader/seqdbalias.cpp
4419 --- ncbisrc/src/objtools/blast/seqdb_reader/seqdbalias.cpp 2008-09-15 09:35:34.000000000 -0700
4420 +++ ncbisrc2/src/objtools/blast/seqdb_reader/seqdbalias.cpp 2009-03-30 09:17:22.561095225 -0700
4421 @@ -1,3 +1,4 @@
4422 +#include <string.h>
4423 /* $Id: seqdbalias.cpp 140187 2008-09-15 16:35:34Z camacho $
4424 * ===========================================================================
4425 *
4426 diff -ur ncbisrc/src/objtools/blast/seqdb_reader/seqdbatlas.cpp ncbisrc2/src/objtools/blast/seqdb_reader/seqdbatlas.cpp
4427 --- ncbisrc/src/objtools/blast/seqdb_reader/seqdbatlas.cpp 2008-09-22 11:25:56.000000000 -0700
4428 +++ ncbisrc2/src/objtools/blast/seqdb_reader/seqdbatlas.cpp 2009-03-30 09:17:22.581134978 -0700
4429 @@ -1,3 +1,4 @@
4430 +#include <string.h>
4431 /* $Id: seqdbatlas.cpp 140909 2008-09-22 18:25:56Z ucko $
4432 * ===========================================================================
4433 *
4434 diff -ur ncbisrc/src/objtools/blast/seqdb_reader/seqdbbitset.cpp ncbisrc2/src/objtools/blast/seqdb_reader/seqdbbitset.cpp
4435 --- ncbisrc/src/objtools/blast/seqdb_reader/seqdbbitset.cpp 2008-09-15 09:35:34.000000000 -0700
4436 +++ ncbisrc2/src/objtools/blast/seqdb_reader/seqdbbitset.cpp 2009-03-30 09:17:22.574427583 -0700
4437 @@ -1,3 +1,4 @@
4438 +#include <string.h>
4439 /* $Id: seqdbbitset.cpp 140187 2008-09-15 16:35:34Z camacho $
4440 * ===========================================================================
4441 *
4442 diff -ur ncbisrc/src/objtools/blast/seqdb_reader/seqdbblob.cpp ncbisrc2/src/objtools/blast/seqdb_reader/seqdbblob.cpp
4443 --- ncbisrc/src/objtools/blast/seqdb_reader/seqdbblob.cpp 2008-09-22 11:25:56.000000000 -0700
4444 +++ ncbisrc2/src/objtools/blast/seqdb_reader/seqdbblob.cpp 2009-03-30 09:17:22.584428664 -0700
4445 @@ -1,3 +1,4 @@
4446 +#include <string.h>
4447 /* $Id: seqdbblob.cpp 140909 2008-09-22 18:25:56Z ucko $
4448 * ===========================================================================
4449 *
4450 diff -ur ncbisrc/src/objtools/blast/seqdb_reader/seqdbfile.hpp ncbisrc2/src/objtools/blast/seqdb_reader/seqdbfile.hpp
4451 --- ncbisrc/src/objtools/blast/seqdb_reader/seqdbfile.hpp 2008-09-22 11:25:56.000000000 -0700
4452 +++ ncbisrc2/src/objtools/blast/seqdb_reader/seqdbfile.hpp 2009-03-30 09:19:30.343571940 -0700
4453 @@ -45,6 +45,7 @@
4454 #include "seqdbgeneral.hpp"
4455 #include "seqdbatlas.hpp"
4456
4457 +#include <string.h>
4458 #include <corelib/ncbistr.hpp>
4459 #include <corelib/ncbifile.hpp>
4460 #include <corelib/ncbi_bswap.hpp>
4461 Only in ncbisrc2/src/objtools/blast/seqdb_reader: seqdbfile.hpp~
4462 diff -ur ncbisrc/src/objtools/blast/seqdb_reader/seqdbgeneral.hpp ncbisrc2/src/objtools/blast/seqdb_reader/seqdbgeneral.hpp
4463 --- ncbisrc/src/objtools/blast/seqdb_reader/seqdbgeneral.hpp 2008-09-22 11:25:56.000000000 -0700
4464 +++ ncbisrc2/src/objtools/blast/seqdb_reader/seqdbgeneral.hpp 2009-03-30 09:26:28.374374360 -0700
4465 @@ -40,6 +40,7 @@
4466 #include <objtools/blast/seqdb_reader/seqdbcommon.hpp>
4467 #include <corelib/ncbi_bswap.hpp>
4468 #include <map>
4469 +#include <string.h>
4470
4471 BEGIN_NCBI_SCOPE
4472
4473 Only in ncbisrc2/src/objtools/blast/seqdb_reader: seqdbgeneral.hpp~
4474 diff -ur ncbisrc/src/objtools/blast/seqdb_reader/seqdbvol.cpp ncbisrc2/src/objtools/blast/seqdb_reader/seqdbvol.cpp
4475 --- ncbisrc/src/objtools/blast/seqdb_reader/seqdbvol.cpp 2008-09-15 09:35:34.000000000 -0700
4476 +++ ncbisrc2/src/objtools/blast/seqdb_reader/seqdbvol.cpp 2009-03-30 09:17:22.571175473 -0700
4477 @@ -1,3 +1,4 @@
4478 +#include <string.h>
4479 /* $Id: seqdbvol.cpp 140187 2008-09-15 16:35:34Z camacho $
4480 * ===========================================================================
4481 *
4482 diff -ur ncbisrc/src/objtools/blast/seqdb_reader/test/seqdb_unit_test.cpp ncbisrc2/src/objtools/blast/seqdb_reader/test/seqdb_unit_test.cpp
4483 --- ncbisrc/src/objtools/blast/seqdb_reader/test/seqdb_unit_test.cpp 2008-09-22 11:25:56.000000000 -0700
4484 +++ ncbisrc2/src/objtools/blast/seqdb_reader/test/seqdb_unit_test.cpp 2009-03-30 09:17:22.567762096 -0700
4485 @@ -1,3 +1,4 @@
4486 +#include <string.h>
4487 /* $Id: seqdb_unit_test.cpp 140909 2008-09-22 18:25:56Z ucko $
4488 * ===========================================================================
4489 *
4490 diff -ur ncbisrc/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp ncbisrc2/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp
4491 --- ncbisrc/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp 2008-09-22 11:25:56.000000000 -0700
4492 +++ ncbisrc2/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp 2009-03-30 09:17:22.551135655 -0700
4493 @@ -1,3 +1,4 @@
4494 +#include <string.h>
4495 /* $Id: writedb_unit_test.cpp 140909 2008-09-22 18:25:56Z ucko $
4496 * ===========================================================================
4497 *
4498 diff -ur ncbisrc/src/objtools/blast/seqdb_writer/writedb.cpp ncbisrc2/src/objtools/blast/seqdb_writer/writedb.cpp
4499 --- ncbisrc/src/objtools/blast/seqdb_writer/writedb.cpp 2008-09-22 11:25:56.000000000 -0700
4500 +++ ncbisrc2/src/objtools/blast/seqdb_writer/writedb.cpp 2009-03-30 09:17:22.554427786 -0700
4501 @@ -1,3 +1,4 @@
4502 +#include <string.h>
4503 /* $Id: writedb.cpp 140909 2008-09-22 18:25:56Z ucko $
4504 * ===========================================================================
4505 *
4506 diff -ur ncbisrc/src/objtools/blast/seqdb_writer/writedb_general.hpp ncbisrc2/src/objtools/blast/seqdb_writer/writedb_general.hpp
4507 --- ncbisrc/src/objtools/blast/seqdb_writer/writedb_general.hpp 2008-07-17 10:42:49.000000000 -0700
4508 +++ ncbisrc2/src/objtools/blast/seqdb_writer/writedb_general.hpp 2009-03-30 09:19:07.540540509 -0700
4509 @@ -43,6 +43,7 @@
4510 /// Implemented for: UNIX, MS-Windows
4511
4512 #include <objects/seq/seq__.hpp>
4513 +#include <string.h>
4514
4515 BEGIN_NCBI_SCOPE
4516
4517 Only in ncbisrc2/src/objtools/blast/seqdb_writer: writedb_general.hpp~
4518 diff -ur ncbisrc/src/objtools/blast/seqdb_writer/writedb_isam.cpp ncbisrc2/src/objtools/blast/seqdb_writer/writedb_isam.cpp
4519 --- ncbisrc/src/objtools/blast/seqdb_writer/writedb_isam.cpp 2008-09-22 11:25:56.000000000 -0700
4520 +++ ncbisrc2/src/objtools/blast/seqdb_writer/writedb_isam.cpp 2009-03-30 09:17:22.544427515 -0700
4521 @@ -1,3 +1,4 @@
4522 +#include <string.h>
4523 /* $Id: writedb_isam.cpp 140909 2008-09-22 18:25:56Z ucko $
4524 * ===========================================================================
4525 *
4526 diff -ur ncbisrc/src/objtools/blast_format/blastfmtutil.cpp ncbisrc2/src/objtools/blast_format/blastfmtutil.cpp
4527 --- ncbisrc/src/objtools/blast_format/blastfmtutil.cpp 2008-09-15 09:35:34.000000000 -0700
4528 +++ ncbisrc2/src/objtools/blast_format/blastfmtutil.cpp 2009-03-30 09:17:22.597782038 -0700
4529 @@ -1,3 +1,4 @@
4530 +#include <string.h>
4531 /* $Id: blastfmtutil.cpp 140187 2008-09-15 16:35:34Z camacho $
4532 * ===========================================================================
4533 *
4534 diff -ur ncbisrc/src/objtools/blast_format/seq_writer.cpp ncbisrc2/src/objtools/blast_format/seq_writer.cpp
4535 --- ncbisrc/src/objtools/blast_format/seq_writer.cpp 2008-07-17 10:42:49.000000000 -0700
4536 +++ ncbisrc2/src/objtools/blast_format/seq_writer.cpp 2009-03-30 09:17:22.591074076 -0700
4537 @@ -1,3 +1,4 @@
4538 +#include <string.h>
4539 /* $Id: seq_writer.cpp 134303 2008-07-17 17:42:49Z camacho $
4540 * ===========================================================================
4541 *
4542 diff -ur ncbisrc/src/objtools/blast_format/showalign.cpp ncbisrc2/src/objtools/blast_format/showalign.cpp
4543 --- ncbisrc/src/objtools/blast_format/showalign.cpp 2008-09-15 09:35:34.000000000 -0700
4544 +++ ncbisrc2/src/objtools/blast_format/showalign.cpp 2009-03-30 09:17:22.614469160 -0700
4545 @@ -1,3 +1,4 @@
4546 +#include <string.h>
4547 /* $Id: showalign.cpp 140187 2008-09-15 16:35:34Z camacho $
4548 * ===========================================================================
4549 *
4550 diff -ur ncbisrc/src/objtools/blast_format/showdefline.cpp ncbisrc2/src/objtools/blast_format/showdefline.cpp
4551 --- ncbisrc/src/objtools/blast_format/showdefline.cpp 2008-09-15 09:35:34.000000000 -0700
4552 +++ ncbisrc2/src/objtools/blast_format/showdefline.cpp 2009-03-30 09:17:22.607741024 -0700
4553 @@ -1,3 +1,4 @@
4554 +#include <string.h>
4555 /* $Id: showdefline.cpp 140187 2008-09-15 16:35:34Z camacho $
4556 * ===========================================================================
4557 *
4558 diff -ur ncbisrc/src/objtools/blast_format/unit_test/seqalignfilter_unit_test.cpp ncbisrc2/src/objtools/blast_format/unit_test/seqalignfilter_unit_test.cpp
4559 --- ncbisrc/src/objtools/blast_format/unit_test/seqalignfilter_unit_test.cpp 2008-09-22 11:25:56.000000000 -0700
4560 +++ ncbisrc2/src/objtools/blast_format/unit_test/seqalignfilter_unit_test.cpp 2009-03-30 09:17:22.604468136 -0700
4561 @@ -1,3 +1,4 @@
4562 +#include <string.h>
4563 /* $Id: seqalignfilter_unit_test.cpp 140909 2008-09-22 18:25:56Z ucko $
4564 * ===========================================================================
4565 *
4566 diff -ur ncbisrc/src/objtools/cddalignview/cav_function.cpp ncbisrc2/src/objtools/cddalignview/cav_function.cpp
4567 --- ncbisrc/src/objtools/cddalignview/cav_function.cpp 2008-08-27 14:07:05.000000000 -0700
4568 +++ ncbisrc2/src/objtools/cddalignview/cav_function.cpp 2009-03-30 09:17:22.541115045 -0700
4569 @@ -1,3 +1,4 @@
4570 +#include <string.h>
4571 /* $Id: cav_function.cpp 138728 2008-08-27 21:07:05Z thiessen $
4572 * ===========================================================================
4573 *
4574 diff -ur ncbisrc/src/objtools/data_loaders/genbank/blob_id.cpp ncbisrc2/src/objtools/data_loaders/genbank/blob_id.cpp
4575 --- ncbisrc/src/objtools/data_loaders/genbank/blob_id.cpp 2007-05-14 08:07:12.000000000 -0700
4576 +++ ncbisrc2/src/objtools/data_loaders/genbank/blob_id.cpp 2009-03-30 09:17:22.487761230 -0700
4577 @@ -1,3 +1,4 @@
4578 +#include <string.h>
4579 /* $Id: blob_id.cpp 103915 2007-05-14 15:07:12Z vasilche $
4580 * ===========================================================================
4581 * PUBLIC DOMAIN NOTICE
4582 diff -ur ncbisrc/src/objtools/data_loaders/genbank/cache/reader_cache.cpp ncbisrc2/src/objtools/data_loaders/genbank/cache/reader_cache.cpp
4583 --- ncbisrc/src/objtools/data_loaders/genbank/cache/reader_cache.cpp 2008-05-21 09:24:51.000000000 -0700
4584 +++ ncbisrc2/src/objtools/data_loaders/genbank/cache/reader_cache.cpp 2009-03-30 09:05:18.050323574 -0700
4585 @@ -1,3 +1,4 @@
4586 +#include <string.h>
4587 /* $Id: reader_cache.cpp 128341 2008-05-21 16:24:51Z vasilche $
4588 * ===========================================================================
4589 * PUBLIC DOMAIN NOTICE
4590 Only in ncbisrc2/src/objtools/data_loaders/genbank/cache: reader_cache.cpp~
4591 diff -ur ncbisrc/src/objtools/data_loaders/genbank/dispatcher.cpp ncbisrc2/src/objtools/data_loaders/genbank/dispatcher.cpp
4592 --- ncbisrc/src/objtools/data_loaders/genbank/dispatcher.cpp 2008-11-07 09:07:29.000000000 -0800
4593 +++ ncbisrc2/src/objtools/data_loaders/genbank/dispatcher.cpp 2009-03-30 09:17:22.494427880 -0700
4594 @@ -1,3 +1,4 @@
4595 +#include <string.h>
4596 /* $Id: dispatcher.cpp 145179 2008-11-07 17:07:29Z vasilche $
4597 * ===========================================================================
4598 * PUBLIC DOMAIN NOTICE
4599 diff -ur ncbisrc/src/objtools/data_loaders/genbank/id1/reader_id1.cpp ncbisrc2/src/objtools/data_loaders/genbank/id1/reader_id1.cpp
4600 --- ncbisrc/src/objtools/data_loaders/genbank/id1/reader_id1.cpp 2008-06-09 09:03:06.000000000 -0700
4601 +++ ncbisrc2/src/objtools/data_loaders/genbank/id1/reader_id1.cpp 2009-03-30 09:17:22.491095057 -0700
4602 @@ -1,3 +1,4 @@
4603 +#include <string.h>
4604 /* $Id: reader_id1.cpp 130248 2008-06-09 16:03:06Z vasilche $
4605 * ===========================================================================
4606 * PUBLIC DOMAIN NOTICE
4607 diff -ur ncbisrc/src/objtools/data_loaders/genbank/processors.cpp ncbisrc2/src/objtools/data_loaders/genbank/processors.cpp
4608 --- ncbisrc/src/objtools/data_loaders/genbank/processors.cpp 2008-08-04 09:42:25.000000000 -0700
4609 +++ ncbisrc2/src/objtools/data_loaders/genbank/processors.cpp 2009-03-30 08:56:35.130375934 -0700
4610 @@ -71,7 +71,7 @@
4611 #include <util/compress/zlib.hpp>
4612
4613 #include <serial/pack_string.hpp>
4614 -
4615 +#include <string.h>
4616
4617 #define NCBI_USE_ERRCODE_X Objtools_Rd_Process
4618
4619 Only in ncbisrc2/src/objtools/data_loaders/genbank: processors.cpp~
4620 diff -ur ncbisrc/src/objtools/data_loaders/genbank/seqref.cpp ncbisrc2/src/objtools/data_loaders/genbank/seqref.cpp
4621 --- ncbisrc/src/objtools/data_loaders/genbank/seqref.cpp 2007-05-04 10:18:18.000000000 -0700
4622 +++ ncbisrc2/src/objtools/data_loaders/genbank/seqref.cpp 2009-03-30 09:06:36.797231877 -0700
4623 @@ -1,3 +1,4 @@
4624 +#include <string.h>
4625 /* $Id: seqref.cpp 103491 2007-05-04 17:18:18Z kazimird $
4626 * ===========================================================================
4627 * PUBLIC DOMAIN NOTICE
4628 diff -ur ncbisrc/src/objtools/data_loaders/genbank/test/test_objmgr_gbloader_mt.cpp ncbisrc2/src/objtools/data_loaders/genbank/test/test_objmgr_gbloader_mt.cpp
4629 --- ncbisrc/src/objtools/data_loaders/genbank/test/test_objmgr_gbloader_mt.cpp 2007-05-04 10:18:18.000000000 -0700
4630 +++ ncbisrc2/src/objtools/data_loaders/genbank/test/test_objmgr_gbloader_mt.cpp 2009-03-30 09:07:07.187487569 -0700
4631 @@ -1,3 +1,4 @@
4632 +#include <string.h>
4633 /* $Id: test_objmgr_gbloader_mt.cpp 103491 2007-05-04 17:18:18Z kazimird $
4634 * ===========================================================================
4635 *
4636 diff -ur ncbisrc/src/objtools/data_loaders/genbank/test/test_seqvector_ci.cpp ncbisrc2/src/objtools/data_loaders/genbank/test/test_seqvector_ci.cpp
4637 --- ncbisrc/src/objtools/data_loaders/genbank/test/test_seqvector_ci.cpp 2007-05-04 10:18:18.000000000 -0700
4638 +++ ncbisrc2/src/objtools/data_loaders/genbank/test/test_seqvector_ci.cpp 2009-03-30 09:07:45.653653190 -0700
4639 @@ -1,3 +1,4 @@
4640 +#include <string.h>
4641 /* $Id: test_seqvector_ci.cpp 103491 2007-05-04 17:18:18Z kazimird $
4642 * ===========================================================================
4643 *
4644 diff -ur ncbisrc/src/objtools/edit/autodef_feature_clause.cpp ncbisrc2/src/objtools/edit/autodef_feature_clause.cpp
4645 --- ncbisrc/src/objtools/edit/autodef_feature_clause.cpp 2008-10-31 05:13:05.000000000 -0700
4646 +++ ncbisrc2/src/objtools/edit/autodef_feature_clause.cpp 2009-03-30 09:17:22.627801481 -0700
4647 @@ -1,3 +1,4 @@
4648 +#include <string.h>
4649 /* $Id: autodef_feature_clause.cpp 144582 2008-10-31 12:13:05Z dicuccio $
4650 * ===========================================================================
4651 *
4652 diff -ur ncbisrc/src/objtools/format/comment_item.cpp ncbisrc2/src/objtools/format/comment_item.cpp
4653 --- ncbisrc/src/objtools/format/comment_item.cpp 2007-06-20 09:13:34.000000000 -0700
4654 +++ ncbisrc2/src/objtools/format/comment_item.cpp 2009-03-30 08:56:01.447045926 -0700
4655 @@ -54,7 +54,7 @@
4656 #include <objtools/format/items/comment_item.hpp>
4657 #include <objtools/format/context.hpp>
4658 #include "utils.hpp"
4659 -
4660 +#include <string.h>
4661
4662 BEGIN_NCBI_SCOPE
4663 BEGIN_SCOPE(objects)
4664 Only in ncbisrc2/src/objtools/format: comment_item.cpp~
4665 diff -ur ncbisrc/src/objtools/format/embl_formatter.cpp ncbisrc2/src/objtools/format/embl_formatter.cpp
4666 --- ncbisrc/src/objtools/format/embl_formatter.cpp 2007-05-04 10:18:18.000000000 -0700
4667 +++ ncbisrc2/src/objtools/format/embl_formatter.cpp 2009-03-30 08:55:19.110550398 -0700
4668 @@ -43,7 +43,7 @@
4669 #include <objtools/format/embl_formatter.hpp>
4670 #include <objtools/format/context.hpp>
4671 #include "utils.hpp"
4672 -
4673 +#include <string.h>
4674
4675 BEGIN_NCBI_SCOPE
4676 BEGIN_SCOPE(objects)
4677 Only in ncbisrc2/src/objtools/format: embl_formatter.cpp~
4678 diff -ur ncbisrc/src/objtools/format/flat_seqloc.cpp ncbisrc2/src/objtools/format/flat_seqloc.cpp
4679 --- ncbisrc/src/objtools/format/flat_seqloc.cpp 2007-05-04 10:18:18.000000000 -0700
4680 +++ ncbisrc2/src/objtools/format/flat_seqloc.cpp 2009-03-30 08:54:33.223712095 -0700
4681 @@ -47,7 +47,7 @@
4682 #include <objtools/format/context.hpp>
4683 #include <algorithm>
4684 #include "utils.hpp"
4685 -
4686 +#include <string.h>
4687
4688 BEGIN_NCBI_SCOPE
4689 BEGIN_SCOPE(objects)
4690 Only in ncbisrc2/src/objtools/format: flat_seqloc.cpp~
4691 diff -ur ncbisrc/src/objtools/format/gbseq_formatter.cpp ncbisrc2/src/objtools/format/gbseq_formatter.cpp
4692 --- ncbisrc/src/objtools/format/gbseq_formatter.cpp 2007-05-04 10:18:18.000000000 -0700
4693 +++ ncbisrc2/src/objtools/format/gbseq_formatter.cpp 2009-03-30 08:55:28.233705851 -0700
4694 @@ -62,7 +62,7 @@
4695 #include <objtools/format/items/segment_item.hpp>
4696 #include <objtools/format/items/contig_item.hpp>
4697 #include "utils.hpp"
4698 -
4699 +#include <string.h>
4700
4701 BEGIN_NCBI_SCOPE
4702 BEGIN_SCOPE(objects)
4703 Only in ncbisrc2/src/objtools/format: gbseq_formatter.cpp~
4704 diff -ur ncbisrc/src/objtools/format/genbank_formatter.cpp ncbisrc2/src/objtools/format/genbank_formatter.cpp
4705 --- ncbisrc/src/objtools/format/genbank_formatter.cpp 2007-12-19 11:47:04.000000000 -0800
4706 +++ ncbisrc2/src/objtools/format/genbank_formatter.cpp 2009-03-30 08:56:12.934702244 -0700
4707 @@ -65,7 +65,7 @@
4708
4709 #include <algorithm>
4710 #include <stdio.h>
4711 -
4712 +#include <string.h>
4713
4714
4715 BEGIN_NCBI_SCOPE
4716 Only in ncbisrc2/src/objtools/format: genbank_formatter.cpp~
4717 diff -ur ncbisrc/src/objtools/format/gff3_formatter.cpp ncbisrc2/src/objtools/format/gff3_formatter.cpp
4718 --- ncbisrc/src/objtools/format/gff3_formatter.cpp 2008-04-15 07:41:08.000000000 -0700
4719 +++ ncbisrc2/src/objtools/format/gff3_formatter.cpp 2009-03-30 08:55:40.250788753 -0700
4720 @@ -47,7 +47,7 @@
4721 #include <objmgr/util/sequence.hpp>
4722 #include <objtools/alnmgr/alnmap.hpp>
4723 #include <objtools/error_codes.hpp>
4724 -
4725 +#include <string.h>
4726
4727 #define NCBI_USE_ERRCODE_X Objtools_Fmt_GFF
4728
4729 Only in ncbisrc2/src/objtools/format: gff3_formatter.cpp~
4730 diff -ur ncbisrc/src/objtools/format/item_formatter.cpp ncbisrc2/src/objtools/format/item_formatter.cpp
4731 --- ncbisrc/src/objtools/format/item_formatter.cpp 2008-06-04 06:20:52.000000000 -0700
4732 +++ ncbisrc2/src/objtools/format/item_formatter.cpp 2009-03-30 08:55:50.073713725 -0700
4733 @@ -59,7 +59,7 @@
4734 #include <objtools/format/context.hpp>
4735 #include <objtools/format/flat_expt.hpp>
4736 #include "utils.hpp"
4737 -
4738 +#include <string.h>
4739
4740 BEGIN_NCBI_SCOPE
4741 BEGIN_SCOPE(objects)
4742 Only in ncbisrc2/src/objtools/format: item_formatter.cpp~
4743 diff -ur ncbisrc/src/objtools/format/locus_item.cpp ncbisrc2/src/objtools/format/locus_item.cpp
4744 --- ncbisrc/src/objtools/format/locus_item.cpp 2007-05-04 10:18:18.000000000 -0700
4745 +++ ncbisrc2/src/objtools/format/locus_item.cpp 2009-03-30 08:54:44.690417106 -0700
4746 @@ -31,7 +31,7 @@
4747 */
4748 #include <ncbi_pch.hpp>
4749 #include <corelib/ncbistd.hpp>
4750 -
4751 +#include <string.h>
4752 #include <objects/general/Date.hpp>
4753 #include <objects/seq/Bioseq.hpp>
4754 #include <objects/seq/MolInfo.hpp>
4755 Only in ncbisrc2/src/objtools/format: locus_item.cpp~
4756 diff -ur ncbisrc/src/objtools/format/qualifiers.cpp ncbisrc2/src/objtools/format/qualifiers.cpp
4757 --- ncbisrc/src/objtools/format/qualifiers.cpp 2008-04-15 08:55:17.000000000 -0700
4758 +++ ncbisrc2/src/objtools/format/qualifiers.cpp 2009-03-30 08:54:56.374472091 -0700
4759 @@ -53,7 +53,7 @@
4760 #include <objtools/format/items/qualifiers.hpp>
4761 #include <objtools/format/context.hpp>
4762 #include "utils.hpp"
4763 -
4764 +#include <string.h>
4765
4766 BEGIN_NCBI_SCOPE
4767 BEGIN_SCOPE(objects)
4768 Only in ncbisrc2/src/objtools/format: qualifiers.cpp~
4769 diff -ur ncbisrc/src/objtools/format/reference_item.cpp ncbisrc2/src/objtools/format/reference_item.cpp
4770 --- ncbisrc/src/objtools/format/reference_item.cpp 2007-05-30 12:00:04.000000000 -0700
4771 +++ ncbisrc2/src/objtools/format/reference_item.cpp 2009-03-30 08:54:10.074130288 -0700
4772 @@ -64,7 +64,7 @@
4773 #include <objtools/format/items/reference_item.hpp>
4774 #include <objtools/format/context.hpp>
4775 #include "utils.hpp"
4776 -
4777 +#include <string.h>
4778
4779 BEGIN_NCBI_SCOPE
4780 BEGIN_SCOPE(objects)
4781 Only in ncbisrc2/src/objtools/format: reference_item.cpp~
4782 diff -ur ncbisrc/src/objtools/format/utils.cpp ncbisrc2/src/objtools/format/utils.cpp
4783 --- ncbisrc/src/objtools/format/utils.cpp 2008-02-26 07:18:58.000000000 -0800
4784 +++ ncbisrc2/src/objtools/format/utils.cpp 2009-03-30 08:55:06.813881730 -0700
4785 @@ -52,7 +52,7 @@
4786 #include <objmgr/util/sequence.hpp>
4787 #include <algorithm>
4788 #include "utils.hpp"
4789 -
4790 +#include <string.h>
4791
4792 BEGIN_NCBI_SCOPE
4793 BEGIN_SCOPE(objects)
4794 Only in ncbisrc2/src/objtools/format: utils.cpp~
4795 diff -ur ncbisrc/src/objtools/readers/aln_reader.cpp ncbisrc2/src/objtools/readers/aln_reader.cpp
4796 --- ncbisrc/src/objtools/readers/aln_reader.cpp 2007-10-18 08:39:21.000000000 -0700
4797 +++ ncbisrc2/src/objtools/readers/aln_reader.cpp 2009-03-30 09:17:22.527740869 -0700
4798 @@ -1,3 +1,4 @@
4799 +#include <string.h>
4800 /* $Id: aln_reader.cpp 112468 2007-10-18 15:39:21Z ivanovp $
4801 * ===========================================================================
4802 *
4803 diff -ur ncbisrc/src/objtools/readers/fasta.cpp ncbisrc2/src/objtools/readers/fasta.cpp
4804 --- ncbisrc/src/objtools/readers/fasta.cpp 2008-03-12 10:47:15.000000000 -0700
4805 +++ ncbisrc2/src/objtools/readers/fasta.cpp 2009-03-30 09:17:22.524427598 -0700
4806 @@ -1,3 +1,4 @@
4807 +#include <string.h>
4808 /* $Id: fasta.cpp 121879 2008-03-12 17:47:15Z ucko $
4809 * ===========================================================================
4810 *
4811 diff -ur ncbisrc/src/objtools/readers/glimmer_reader.cpp ncbisrc2/src/objtools/readers/glimmer_reader.cpp
4812 --- ncbisrc/src/objtools/readers/glimmer_reader.cpp 2007-10-18 08:39:21.000000000 -0700
4813 +++ ncbisrc2/src/objtools/readers/glimmer_reader.cpp 2009-03-30 09:17:22.531074348 -0700
4814 @@ -1,3 +1,4 @@
4815 +#include <string.h>
4816 /* $Id: glimmer_reader.cpp 112468 2007-10-18 15:39:21Z ivanovp $
4817 * ===========================================================================
4818 *
4819 diff -ur ncbisrc/src/objtools/readers/rm_reader.cpp ncbisrc2/src/objtools/readers/rm_reader.cpp
4820 --- ncbisrc/src/objtools/readers/rm_reader.cpp 2007-10-18 08:39:21.000000000 -0700
4821 +++ ncbisrc2/src/objtools/readers/rm_reader.cpp 2009-03-30 09:17:22.537821666 -0700
4822 @@ -1,3 +1,4 @@
4823 +#include <string.h>
4824 /* $Id: rm_reader.cpp 112468 2007-10-18 15:39:21Z ivanovp $
4825 * ===========================================================================
4826 *
4827 diff -ur ncbisrc/src/objtools/test/objmgr/test_annot_ci.cpp ncbisrc2/src/objtools/test/objmgr/test_annot_ci.cpp
4828 --- ncbisrc/src/objtools/test/objmgr/test_annot_ci.cpp 2007-05-04 10:18:18.000000000 -0700
4829 +++ ncbisrc2/src/objtools/test/objmgr/test_annot_ci.cpp 2009-03-30 09:17:22.511099149 -0700
4830 @@ -1,3 +1,4 @@
4831 +#include <string.h>
4832 /* $Id: test_annot_ci.cpp 103491 2007-05-04 17:18:18Z kazimird $
4833 * ===========================================================================
4834 *
4835 diff -ur ncbisrc/src/objtools/test/objmgr/test_objmgr_data.cpp ncbisrc2/src/objtools/test/objmgr/test_objmgr_data.cpp
4836 --- ncbisrc/src/objtools/test/objmgr/test_objmgr_data.cpp 2008-07-01 11:37:12.000000000 -0700
4837 +++ ncbisrc2/src/objtools/test/objmgr/test_objmgr_data.cpp 2009-03-30 09:17:22.521135685 -0700
4838 @@ -1,3 +1,4 @@
4839 +#include <string.h>
4840 /* $Id: test_objmgr_data.cpp 132661 2008-07-01 18:37:12Z vasilche $
4841 * ===========================================================================
4842 *
4843 diff -ur ncbisrc/src/objtools/test/objmgr/test_objmgr_data_mt.cpp ncbisrc2/src/objtools/test/objmgr/test_objmgr_data_mt.cpp
4844 --- ncbisrc/src/objtools/test/objmgr/test_objmgr_data_mt.cpp 2008-07-17 10:53:19.000000000 -0700
4845 +++ ncbisrc2/src/objtools/test/objmgr/test_objmgr_data_mt.cpp 2009-03-30 09:17:22.514489337 -0700
4846 @@ -1,3 +1,4 @@
4847 +#include <string.h>
4848 /* $Id: test_objmgr_data_mt.cpp 134305 2008-07-17 17:53:19Z ucko $
4849 * ===========================================================================
4850 *
4851 diff -ur ncbisrc/src/objtools/test/objmgr/test_seqvector_ci.cpp ncbisrc2/src/objtools/test/objmgr/test_seqvector_ci.cpp
4852 --- ncbisrc/src/objtools/test/objmgr/test_seqvector_ci.cpp 2007-05-04 10:18:18.000000000 -0700
4853 +++ ncbisrc2/src/objtools/test/objmgr/test_seqvector_ci.cpp 2009-03-30 09:17:22.507740842 -0700
4854 @@ -1,3 +1,4 @@
4855 +#include <string.h>
4856 /* $Id: test_seqvector_ci.cpp 103491 2007-05-04 17:18:18Z kazimird $
4857 * ===========================================================================
4858 *
4859 diff -ur ncbisrc/src/objtools/validator/validerror_bioseq.cpp ncbisrc2/src/objtools/validator/validerror_bioseq.cpp
4860 --- ncbisrc/src/objtools/validator/validerror_bioseq.cpp 2007-10-18 08:39:21.000000000 -0700
4861 +++ ncbisrc2/src/objtools/validator/validerror_bioseq.cpp 2009-03-30 09:17:22.587780935 -0700
4862 @@ -1,3 +1,4 @@
4863 +#include <string.h>
4864 /* $Id: validerror_bioseq.cpp 112468 2007-10-18 15:39:21Z ivanovp $
4865 * ===========================================================================
4866 *
4867 diff -ur ncbisrc/src/serial/asntypes.cpp ncbisrc2/src/serial/asntypes.cpp
4868 --- ncbisrc/src/serial/asntypes.cpp 2007-11-16 07:18:12.000000000 -0800
4869 +++ ncbisrc2/src/serial/asntypes.cpp 2009-03-30 09:17:24.161511390 -0700
4870 @@ -1,3 +1,4 @@
4871 +#include <string.h>
4872 /* $Id: asntypes.cpp 114192 2007-11-16 15:18:12Z ucko $
4873 * ===========================================================================
4874 *
4875 diff -ur ncbisrc/src/serial/datatool/alexer.cpp ncbisrc2/src/serial/datatool/alexer.cpp
4876 --- ncbisrc/src/serial/datatool/alexer.cpp 2008-03-25 09:45:09.000000000 -0700
4877 +++ ncbisrc2/src/serial/datatool/alexer.cpp 2009-03-30 09:17:24.281490741 -0700
4878 @@ -1,3 +1,4 @@
4879 +#include <string.h>
4880 /* $Id: alexer.cpp 122761 2008-03-25 16:45:09Z gouriano $
4881 * ===========================================================================
4882 *
4883 diff -ur ncbisrc/src/serial/datatool/blocktype.cpp ncbisrc2/src/serial/datatool/blocktype.cpp
4884 --- ncbisrc/src/serial/datatool/blocktype.cpp 2008-03-25 09:45:09.000000000 -0700
4885 +++ ncbisrc2/src/serial/datatool/blocktype.cpp 2009-03-30 09:17:24.271571315 -0700
4886 @@ -1,3 +1,4 @@
4887 +#include <string.h>
4888 /* $Id: blocktype.cpp 122761 2008-03-25 16:45:09Z gouriano $
4889 * ===========================================================================
4890 *
4891 diff -ur ncbisrc/src/serial/datatool/choicestr.cpp ncbisrc2/src/serial/datatool/choicestr.cpp
4892 --- ncbisrc/src/serial/datatool/choicestr.cpp 2008-03-25 09:45:09.000000000 -0700
4893 +++ ncbisrc2/src/serial/datatool/choicestr.cpp 2009-03-30 09:17:24.228299286 -0700
4894 @@ -1,3 +1,4 @@
4895 +#include <string.h>
4896 /* $Id: choicestr.cpp 122761 2008-03-25 16:45:09Z gouriano $
4897 * ===========================================================================
4898 *
4899 diff -ur ncbisrc/src/serial/datatool/classctx.hpp ncbisrc2/src/serial/datatool/classctx.hpp
4900 --- ncbisrc/src/serial/datatool/classctx.hpp 2008-03-25 09:45:09.000000000 -0700
4901 +++ ncbisrc2/src/serial/datatool/classctx.hpp 2009-03-30 09:23:41.174222677 -0700
4902 @@ -36,6 +36,7 @@
4903 #include <corelib/ncbistd.hpp>
4904 #include <corelib/ncbistre.hpp>
4905 #include <set>
4906 +#include <string.h>
4907
4908 BEGIN_NCBI_SCOPE
4909
4910 Only in ncbisrc2/src/serial/datatool: classctx.hpp~
4911 diff -ur ncbisrc/src/serial/datatool/classstr.cpp ncbisrc2/src/serial/datatool/classstr.cpp
4912 --- ncbisrc/src/serial/datatool/classstr.cpp 2008-09-19 10:18:41.000000000 -0700
4913 +++ ncbisrc2/src/serial/datatool/classstr.cpp 2009-03-30 09:17:24.258219106 -0700
4914 @@ -1,3 +1,4 @@
4915 +#include <string.h>
4916 /* $Id: classstr.cpp 140738 2008-09-19 17:18:41Z gouriano $
4917 * ===========================================================================
4918 *
4919 diff -ur ncbisrc/src/serial/datatool/code.cpp ncbisrc2/src/serial/datatool/code.cpp
4920 --- ncbisrc/src/serial/datatool/code.cpp 2008-03-25 09:45:09.000000000 -0700
4921 +++ ncbisrc2/src/serial/datatool/code.cpp 2009-03-30 09:17:24.268198767 -0700
4922 @@ -1,3 +1,4 @@
4923 +#include <string.h>
4924 /* $Id: code.cpp 122761 2008-03-25 16:45:09Z gouriano $
4925 * ===========================================================================
4926 *
4927 diff -ur ncbisrc/src/serial/datatool/code.hpp ncbisrc2/src/serial/datatool/code.hpp
4928 --- ncbisrc/src/serial/datatool/code.hpp 2008-03-25 09:45:09.000000000 -0700
4929 +++ ncbisrc2/src/serial/datatool/code.hpp 2009-03-30 09:23:26.483636126 -0700
4930 @@ -37,6 +37,7 @@
4931 #include "classctx.hpp"
4932 #include "namespace.hpp"
4933 #include <list>
4934 +#include <string.h>
4935
4936 BEGIN_NCBI_SCOPE
4937
4938 Only in ncbisrc2/src/serial/datatool: code.hpp~
4939 diff -ur ncbisrc/src/serial/datatool/dtdlexer.cpp ncbisrc2/src/serial/datatool/dtdlexer.cpp
4940 --- ncbisrc/src/serial/datatool/dtdlexer.cpp 2008-03-25 09:45:09.000000000 -0700
4941 +++ ncbisrc2/src/serial/datatool/dtdlexer.cpp 2009-03-30 09:17:24.204925316 -0700
4942 @@ -1,3 +1,4 @@
4943 +#include <string.h>
4944 /* $Id: dtdlexer.cpp 122761 2008-03-25 16:45:09Z gouriano $
4945 * ===========================================================================
4946 *
4947 diff -ur ncbisrc/src/serial/datatool/dtdparser.cpp ncbisrc2/src/serial/datatool/dtdparser.cpp
4948 --- ncbisrc/src/serial/datatool/dtdparser.cpp 2008-07-02 13:32:55.000000000 -0700
4949 +++ ncbisrc2/src/serial/datatool/dtdparser.cpp 2009-03-30 09:17:24.284885737 -0700
4950 @@ -1,3 +1,4 @@
4951 +#include <string.h>
4952 /* $Id: dtdparser.cpp 132840 2008-07-02 20:32:55Z gouriano $
4953 * ===========================================================================
4954 *
4955 diff -ur ncbisrc/src/serial/datatool/enumstr.cpp ncbisrc2/src/serial/datatool/enumstr.cpp
4956 --- ncbisrc/src/serial/datatool/enumstr.cpp 2008-03-25 09:45:09.000000000 -0700
4957 +++ ncbisrc2/src/serial/datatool/enumstr.cpp 2009-03-30 09:17:24.244865119 -0700
4958 @@ -1,3 +1,4 @@
4959 +#include <string.h>
4960 /* $Id: enumstr.cpp 122761 2008-03-25 16:45:09Z gouriano $
4961 * ===========================================================================
4962 *
4963 diff -ur ncbisrc/src/serial/datatool/filecode.cpp ncbisrc2/src/serial/datatool/filecode.cpp
4964 --- ncbisrc/src/serial/datatool/filecode.cpp 2008-07-23 11:14:33.000000000 -0700
4965 +++ ncbisrc2/src/serial/datatool/filecode.cpp 2009-03-30 09:17:24.251531204 -0700
4966 @@ -1,3 +1,4 @@
4967 +#include <string.h>
4968 /* $Id: filecode.cpp 135164 2008-07-23 18:14:33Z gouriano $
4969 * ===========================================================================
4970 *
4971 diff -ur ncbisrc/src/serial/datatool/filecode.hpp ncbisrc2/src/serial/datatool/filecode.hpp
4972 --- ncbisrc/src/serial/datatool/filecode.hpp 2008-03-25 09:45:09.000000000 -0700
4973 +++ ncbisrc2/src/serial/datatool/filecode.hpp 2009-03-30 09:23:08.100216519 -0700
4974 @@ -41,6 +41,7 @@
4975 #include <map>
4976 #include <set>
4977 #include <list>
4978 +#include <string.h>
4979
4980 BEGIN_NCBI_SCOPE
4981
4982 Only in ncbisrc2/src/serial/datatool: filecode.hpp~
4983 diff -ur ncbisrc/src/serial/datatool/fileutil.cpp ncbisrc2/src/serial/datatool/fileutil.cpp
4984 --- ncbisrc/src/serial/datatool/fileutil.cpp 2008-03-25 09:45:09.000000000 -0700
4985 +++ ncbisrc2/src/serial/datatool/fileutil.cpp 2009-03-30 09:17:24.274885635 -0700
4986 @@ -1,3 +1,4 @@
4987 +#include <string.h>
4988 /* $Id: fileutil.cpp 122761 2008-03-25 16:45:09Z gouriano $
4989 * ===========================================================================
4990 *
4991 diff -ur ncbisrc/src/serial/datatool/fileutil.hpp ncbisrc2/src/serial/datatool/fileutil.hpp
4992 --- ncbisrc/src/serial/datatool/fileutil.hpp 2008-03-25 09:45:09.000000000 -0700
4993 +++ ncbisrc2/src/serial/datatool/fileutil.hpp 2009-03-30 09:22:07.860273625 -0700
4994 @@ -35,6 +35,7 @@
4995 #include <corelib/ncbistd.hpp>
4996 #include <serial/serialdef.hpp>
4997 #include <memory>
4998 +#include <string.h>
4999
5000 BEGIN_NCBI_SCOPE
5001
5002 Only in ncbisrc2/src/serial/datatool: fileutil.hpp~
5003 diff -ur ncbisrc/src/serial/datatool/generate.cpp ncbisrc2/src/serial/datatool/generate.cpp
5004 --- ncbisrc/src/serial/datatool/generate.cpp 2008-03-25 09:45:09.000000000 -0700
5005 +++ ncbisrc2/src/serial/datatool/generate.cpp 2009-03-30 09:17:24.224966559 -0700
5006 @@ -1,3 +1,4 @@
5007 +#include <string.h>
5008 /* $Id: generate.cpp 122761 2008-03-25 16:45:09Z gouriano $
5009 * ===========================================================================
5010 *
5011 diff -ur ncbisrc/src/serial/datatool/lexer.cpp ncbisrc2/src/serial/datatool/lexer.cpp
5012 --- ncbisrc/src/serial/datatool/lexer.cpp 2008-03-25 09:45:09.000000000 -0700
5013 +++ ncbisrc2/src/serial/datatool/lexer.cpp 2009-03-30 09:17:24.211511271 -0700
5014 @@ -1,3 +1,4 @@
5015 +#include <string.h>
5016 /* $Id: lexer.cpp 122761 2008-03-25 16:45:09Z gouriano $
5017 * ===========================================================================
5018 *
5019 diff -ur ncbisrc/src/serial/datatool/rpcgen.cpp ncbisrc2/src/serial/datatool/rpcgen.cpp
5020 --- ncbisrc/src/serial/datatool/rpcgen.cpp 2008-03-25 09:45:09.000000000 -0700
5021 +++ ncbisrc2/src/serial/datatool/rpcgen.cpp 2009-03-30 09:17:24.214946141 -0700
5022 @@ -1,3 +1,4 @@
5023 +#include <string.h>
5024 /* $Id: rpcgen.cpp 122761 2008-03-25 16:45:09Z gouriano $
5025 * ===========================================================================
5026 *
5027 diff -ur ncbisrc/src/serial/datatool/srcutil.cpp ncbisrc2/src/serial/datatool/srcutil.cpp
5028 --- ncbisrc/src/serial/datatool/srcutil.cpp 2008-03-25 09:45:09.000000000 -0700
5029 +++ ncbisrc2/src/serial/datatool/srcutil.cpp 2009-03-30 09:17:24.237946242 -0700
5030 @@ -1,3 +1,4 @@
5031 +#include <string.h>
5032 /* $Id: srcutil.cpp 122761 2008-03-25 16:45:09Z gouriano $
5033 * ===========================================================================
5034 *
5035 diff -ur ncbisrc/src/serial/datatool/srcutil.hpp ncbisrc2/src/serial/datatool/srcutil.hpp
5036 --- ncbisrc/src/serial/datatool/srcutil.hpp 2008-03-25 09:45:09.000000000 -0700
5037 +++ ncbisrc2/src/serial/datatool/srcutil.hpp 2009-03-30 09:22:27.506889058 -0700
5038 @@ -1,6 +1,8 @@
5039 #ifndef SRCUTIL__HPP
5040 #define SRCUTIL__HPP
5041
5042 +#include <string.h>
5043 +
5044 /* $Id: srcutil.hpp 122761 2008-03-25 16:45:09Z gouriano $
5045 * ===========================================================================
5046 *
5047 Only in ncbisrc2/src/serial/datatool: srcutil.hpp~
5048 diff -ur ncbisrc/src/serial/datatool/type.cpp ncbisrc2/src/serial/datatool/type.cpp
5049 --- ncbisrc/src/serial/datatool/type.cpp 2008-03-25 09:45:09.000000000 -0700
5050 +++ ncbisrc2/src/serial/datatool/type.cpp 2009-03-30 09:17:24.264873213 -0700
5051 @@ -1,3 +1,4 @@
5052 +#include <string.h>
5053 /* $Id: type.cpp 122761 2008-03-25 16:45:09Z gouriano $
5054 * ===========================================================================
5055 *
5056 diff -ur ncbisrc/src/serial/datatool/typestr.cpp ncbisrc2/src/serial/datatool/typestr.cpp
5057 --- ncbisrc/src/serial/datatool/typestr.cpp 2008-03-25 09:45:09.000000000 -0700
5058 +++ ncbisrc2/src/serial/datatool/typestr.cpp 2009-03-30 09:17:24.254885533 -0700
5059 @@ -1,3 +1,4 @@
5060 +#include <string.h>
5061 /* $Id: typestr.cpp 122761 2008-03-25 16:45:09Z gouriano $
5062 * ===========================================================================
5063 *
5064 diff -ur ncbisrc/src/serial/datatool/value.cpp ncbisrc2/src/serial/datatool/value.cpp
5065 --- ncbisrc/src/serial/datatool/value.cpp 2008-03-25 12:59:18.000000000 -0700
5066 +++ ncbisrc2/src/serial/datatool/value.cpp 2009-03-30 09:17:24.288177748 -0700
5067 @@ -1,3 +1,4 @@
5068 +#include <string.h>
5069 /* $Id: value.cpp 122796 2008-03-25 19:59:18Z ucko $
5070 * ===========================================================================
5071 *
5072 diff -ur ncbisrc/src/serial/datatool/value.hpp ncbisrc2/src/serial/datatool/value.hpp
5073 --- ncbisrc/src/serial/datatool/value.hpp 2008-03-25 12:59:18.000000000 -0700
5074 +++ ncbisrc2/src/serial/datatool/value.hpp 2009-03-30 09:22:44.563836159 -0700
5075 @@ -33,6 +33,7 @@
5076 *
5077 */
5078
5079 +#include <string.h>
5080 #include <corelib/ncbistd.hpp>
5081 #include <corelib/ncbistre.hpp>
5082 #include <corelib/ncbiutil.hpp>
5083 Only in ncbisrc2/src/serial/datatool: value.hpp~
5084 diff -ur ncbisrc/src/serial/datatool/xsdlexer.cpp ncbisrc2/src/serial/datatool/xsdlexer.cpp
5085 --- ncbisrc/src/serial/datatool/xsdlexer.cpp 2008-03-25 09:45:09.000000000 -0700
5086 +++ ncbisrc2/src/serial/datatool/xsdlexer.cpp 2009-03-30 09:17:24.218238215 -0700
5087 @@ -1,3 +1,4 @@
5088 +#include <string.h>
5089 /* $Id: xsdlexer.cpp 122761 2008-03-25 16:45:09Z gouriano $
5090 * ===========================================================================
5091 *
5092 diff -ur ncbisrc/src/serial/datatool/xsdparser.cpp ncbisrc2/src/serial/datatool/xsdparser.cpp
5093 --- ncbisrc/src/serial/datatool/xsdparser.cpp 2008-10-31 12:30:43.000000000 -0700
5094 +++ ncbisrc2/src/serial/datatool/xsdparser.cpp 2009-03-30 09:17:24.241490744 -0700
5095 @@ -1,3 +1,4 @@
5096 +#include <string.h>
5097 /* $Id: xsdparser.cpp 144651 2008-10-31 19:30:43Z gouriano $
5098 * ===========================================================================
5099 *
5100 diff -ur ncbisrc/src/serial/objistrasn.cpp ncbisrc2/src/serial/objistrasn.cpp
5101 --- ncbisrc/src/serial/objistrasn.cpp 2008-03-11 07:53:45.000000000 -0700
5102 +++ ncbisrc2/src/serial/objistrasn.cpp 2009-03-30 09:17:24.201552437 -0700
5103 @@ -1,3 +1,4 @@
5104 +#include <string.h>
5105 /* $Id: objistrasn.cpp 121708 2008-03-11 14:53:45Z vasilche $
5106 * ===========================================================================
5107 *
5108 diff -ur ncbisrc/src/serial/objistrasnb.cpp ncbisrc2/src/serial/objistrasnb.cpp
5109 --- ncbisrc/src/serial/objistrasnb.cpp 2008-03-06 12:16:01.000000000 -0800
5110 +++ ncbisrc2/src/serial/objistrasnb.cpp 2009-03-30 09:17:24.144885329 -0700
5111 @@ -1,3 +1,4 @@
5112 +#include <string.h>
5113 /* $Id: objistrasnb.cpp 121479 2008-03-06 20:16:01Z vasilche $
5114 * ===========================================================================
5115 *
5116 diff -ur ncbisrc/src/serial/objistrxml.cpp ncbisrc2/src/serial/objistrxml.cpp
5117 --- ncbisrc/src/serial/objistrxml.cpp 2008-08-26 06:12:19.000000000 -0700
5118 +++ ncbisrc2/src/serial/objistrxml.cpp 2009-03-30 09:17:24.168177340 -0700
5119 @@ -1,3 +1,4 @@
5120 +#include <string.h>
5121 /* $Id: objistrxml.cpp 138448 2008-08-26 13:12:19Z gouriano $
5122 * ===========================================================================
5123 *
5124 diff -ur ncbisrc/src/serial/objostrasn.cpp ncbisrc2/src/serial/objostrasn.cpp
5125 --- ncbisrc/src/serial/objostrasn.cpp 2007-10-15 11:28:19.000000000 -0700
5126 +++ ncbisrc2/src/serial/objostrasn.cpp 2009-03-30 09:17:24.294886038 -0700
5127 @@ -1,3 +1,4 @@
5128 +#include <string.h>
5129 /* $Id: objostrasn.cpp 112285 2007-10-15 18:28:19Z ivanovp $
5130 * ===========================================================================
5131 *
5132 diff -ur ncbisrc/src/serial/objostrasnb.cpp ncbisrc2/src/serial/objostrasnb.cpp
5133 --- ncbisrc/src/serial/objostrasnb.cpp 2007-10-15 11:28:19.000000000 -0700
5134 +++ ncbisrc2/src/serial/objostrasnb.cpp 2009-03-30 09:17:24.171532248 -0700
5135 @@ -1,3 +1,4 @@
5136 +#include <string.h>
5137 /* $Id: objostrasnb.cpp 112285 2007-10-15 18:28:19Z ivanovp $
5138 * ===========================================================================
5139 *
5140 diff -ur ncbisrc/src/serial/pathhook.cpp ncbisrc2/src/serial/pathhook.cpp
5141 --- ncbisrc/src/serial/pathhook.cpp 2007-12-03 06:35:28.000000000 -0800
5142 +++ ncbisrc2/src/serial/pathhook.cpp 2009-03-30 09:17:24.164865652 -0700
5143 @@ -1,3 +1,4 @@
5144 +#include <string.h>
5145 /* $Id: pathhook.cpp 114911 2007-12-03 14:35:28Z ivanov $
5146 * ===========================================================================
5147 *
5148 diff -ur ncbisrc/src/serial/serialobject.cpp ncbisrc2/src/serial/serialobject.cpp
5149 --- ncbisrc/src/serial/serialobject.cpp 2008-05-29 08:24:36.000000000 -0700
5150 +++ ncbisrc2/src/serial/serialobject.cpp 2009-03-30 09:17:24.154885615 -0700
5151 @@ -1,3 +1,4 @@
5152 +#include <string.h>
5153 /* $Id: serialobject.cpp 129054 2008-05-29 15:24:36Z lavr $
5154 * ===========================================================================
5155 *
5156 diff -ur ncbisrc/src/serial/soap/soap_body_.cpp ncbisrc2/src/serial/soap/soap_body_.cpp
5157 --- ncbisrc/src/serial/soap/soap_body_.cpp 2007-05-04 10:18:18.000000000 -0700
5158 +++ ncbisrc2/src/serial/soap/soap_body_.cpp 2009-03-30 09:17:24.181510714 -0700
5159 @@ -1,3 +1,4 @@
5160 +#include <string.h>
5161 /* $Id: soap_body_.cpp 103491 2007-05-04 17:18:18Z kazimird $
5162 * ===========================================================================
5163 *
5164 diff -ur ncbisrc/src/serial/soap/soap_detail_.cpp ncbisrc2/src/serial/soap/soap_detail_.cpp
5165 --- ncbisrc/src/serial/soap/soap_detail_.cpp 2007-05-04 10:18:18.000000000 -0700
5166 +++ ncbisrc2/src/serial/soap/soap_detail_.cpp 2009-03-30 09:17:24.178178566 -0700
5167 @@ -1,3 +1,4 @@
5168 +#include <string.h>
5169 /* $Id: soap_detail_.cpp 103491 2007-05-04 17:18:18Z kazimird $
5170 * ===========================================================================
5171 *
5172 diff -ur ncbisrc/src/serial/soap/soap_envelope_.cpp ncbisrc2/src/serial/soap/soap_envelope_.cpp
5173 --- ncbisrc/src/serial/soap/soap_envelope_.cpp 2007-05-04 10:18:18.000000000 -0700
5174 +++ ncbisrc2/src/serial/soap/soap_envelope_.cpp 2009-03-30 09:17:24.198157167 -0700
5175 @@ -1,3 +1,4 @@
5176 +#include <string.h>
5177 /* $Id: soap_envelope_.cpp 103491 2007-05-04 17:18:18Z kazimird $
5178 * ===========================================================================
5179 *
5180 diff -ur ncbisrc/src/serial/soap/soap_fault_.cpp ncbisrc2/src/serial/soap/soap_fault_.cpp
5181 --- ncbisrc/src/serial/soap/soap_fault_.cpp 2007-05-04 10:18:18.000000000 -0700
5182 +++ ncbisrc2/src/serial/soap/soap_fault_.cpp 2009-03-30 09:17:24.184884608 -0700
5183 @@ -1,3 +1,4 @@
5184 +#include <string.h>
5185 /* $Id: soap_fault_.cpp 103491 2007-05-04 17:18:18Z kazimird $
5186 * ===========================================================================
5187 *
5188 diff -ur ncbisrc/src/serial/soap/soap_header_.cpp ncbisrc2/src/serial/soap/soap_header_.cpp
5189 --- ncbisrc/src/serial/soap/soap_header_.cpp 2007-05-04 10:18:18.000000000 -0700
5190 +++ ncbisrc2/src/serial/soap/soap_header_.cpp 2009-03-30 09:17:24.191552069 -0700
5191 @@ -1,3 +1,4 @@
5192 +#include <string.h>
5193 /* $Id: soap_header_.cpp 103491 2007-05-04 17:18:18Z kazimird $
5194 * ===========================================================================
5195 *
5196 diff -ur ncbisrc/src/serial/soap/soap_server.cpp ncbisrc2/src/serial/soap/soap_server.cpp
5197 --- ncbisrc/src/serial/soap/soap_server.cpp 2007-10-18 13:09:30.000000000 -0700
5198 +++ ncbisrc2/src/serial/soap/soap_server.cpp 2009-03-30 09:17:24.188198586 -0700
5199 @@ -1,3 +1,4 @@
5200 +#include <string.h>
5201 /* $Id: soap_server.cpp 112499 2007-10-18 20:09:30Z gouriano $
5202 * ===========================================================================
5203 *
5204 diff -ur ncbisrc/src/serial/stdtypes.cpp ncbisrc2/src/serial/stdtypes.cpp
5205 --- ncbisrc/src/serial/stdtypes.cpp 2007-05-04 10:18:18.000000000 -0700
5206 +++ ncbisrc2/src/serial/stdtypes.cpp 2009-03-30 09:17:24.138198874 -0700
5207 @@ -1,3 +1,4 @@
5208 +#include <string.h>
5209 /* $Id: stdtypes.cpp 103491 2007-05-04 17:18:18Z kazimird $
5210 * ===========================================================================
5211 *
5212 diff -ur ncbisrc/src/serial/test/serialobject.cpp ncbisrc2/src/serial/test/serialobject.cpp
5213 --- ncbisrc/src/serial/test/serialobject.cpp 2007-05-04 10:18:18.000000000 -0700
5214 +++ ncbisrc2/src/serial/test/serialobject.cpp 2009-03-30 09:17:24.148218063 -0700
5215 @@ -1,3 +1,4 @@
5216 +#include <string.h>
5217 #include <ncbi_pch.hpp>
5218 #include "serialobject.hpp"
5219 #include <serial/typeinfo.hpp>
5220 diff -ur ncbisrc/src/serial/test/test_serial.cpp ncbisrc2/src/serial/test/test_serial.cpp
5221 --- ncbisrc/src/serial/test/test_serial.cpp 2007-05-04 10:18:18.000000000 -0700
5222 +++ ncbisrc2/src/serial/test/test_serial.cpp 2009-03-30 09:17:24.151552042 -0700
5223 @@ -1,3 +1,4 @@
5224 +#include <string.h>
5225 /* $Id: test_serial.cpp 103491 2007-05-04 17:18:18Z kazimird $
5226 * ===========================================================================
5227 *
5228 diff -ur ncbisrc/src/util/ascii85.cpp ncbisrc2/src/util/ascii85.cpp
5229 --- ncbisrc/src/util/ascii85.cpp 2008-02-27 04:27:03.000000000 -0800
5230 +++ ncbisrc2/src/util/ascii85.cpp 2009-03-30 09:17:24.624884353 -0700
5231 @@ -1,3 +1,4 @@
5232 +#include <string.h>
5233 /* $Id: ascii85.cpp 120750 2008-02-27 12:27:03Z meric $
5234 * ===========================================================================
5235 *
5236 diff -ur ncbisrc/src/util/bitset/stress_test/rlebtv.h ncbisrc2/src/util/bitset/stress_test/rlebtv.h
5237 --- ncbisrc/src/util/bitset/stress_test/rlebtv.h 2007-05-04 10:18:18.000000000 -0700
5238 +++ ncbisrc2/src/util/bitset/stress_test/rlebtv.h 2009-03-30 09:24:39.696873983 -0700
5239 @@ -24,6 +24,7 @@
5240 #ifndef RLEBTV__H__INCLUDED__
5241 #define RLEBTV__H__INCLUDED__
5242
5243 +#include <string.h>
5244
5245 /*
5246 GAP vector is designed to be very small.
5247 Only in ncbisrc2/src/util/bitset/stress_test: rlebtv.h~
5248 diff -ur ncbisrc/src/util/bitset/stress_test/stress.cpp ncbisrc2/src/util/bitset/stress_test/stress.cpp
5249 --- ncbisrc/src/util/bitset/stress_test/stress.cpp 2007-06-20 08:19:13.000000000 -0700
5250 +++ ncbisrc2/src/util/bitset/stress_test/stress.cpp 2009-03-30 09:17:24.531511116 -0700
5251 @@ -1,3 +1,4 @@
5252 +#include <string.h>
5253 /* $Id: stress.cpp 105976 2007-06-20 15:19:13Z kuznets $
5254 * ===========================================================================
5255 *
5256 diff -ur ncbisrc/src/util/bytesrc.cpp ncbisrc2/src/util/bytesrc.cpp
5257 --- ncbisrc/src/util/bytesrc.cpp 2008-02-04 07:13:19.000000000 -0800
5258 +++ ncbisrc2/src/util/bytesrc.cpp 2009-03-30 09:17:24.598298801 -0700
5259 @@ -1,3 +1,4 @@
5260 +#include <string.h>
5261 /* $Id: bytesrc.cpp 118922 2008-02-04 15:13:19Z lavr $
5262 * ===========================================================================
5263 *
5264 diff -ur ncbisrc/src/util/checksum.cpp ncbisrc2/src/util/checksum.cpp
5265 --- ncbisrc/src/util/checksum.cpp 2007-05-04 10:18:18.000000000 -0700
5266 +++ ncbisrc2/src/util/checksum.cpp 2009-03-30 09:17:24.608178349 -0700
5267 @@ -1,3 +1,4 @@
5268 +#include <string.h>
5269 /* $Id: checksum.cpp 103491 2007-05-04 17:18:18Z kazimird $
5270 * ===========================================================================
5271 *
5272 diff -ur ncbisrc/src/util/compress/bzip2/bzip2.c ncbisrc2/src/util/compress/bzip2/bzip2.c
5273 --- ncbisrc/src/util/compress/bzip2/bzip2.c 2003-04-07 13:15:37.000000000 -0700
5274 +++ ncbisrc2/src/util/compress/bzip2/bzip2.c 2009-03-30 09:17:24.428197676 -0700
5275 @@ -1,3 +1,4 @@
5276 +#include <string.h>
5277
5278 /*-----------------------------------------------------------*/
5279 /*--- A block-sorting, lossless compressor bzip2.c ---*/
5280 diff -ur ncbisrc/src/util/compress/bzip2/bzip2recover.c ncbisrc2/src/util/compress/bzip2/bzip2recover.c
5281 --- ncbisrc/src/util/compress/bzip2/bzip2recover.c 2003-04-07 13:15:37.000000000 -0700
5282 +++ ncbisrc2/src/util/compress/bzip2/bzip2recover.c 2009-03-30 09:17:24.434865017 -0700
5283 @@ -1,3 +1,4 @@
5284 +#include <string.h>
5285
5286 /*-----------------------------------------------------------*/
5287 /*--- Block recoverer program for bzip2 ---*/
5288 diff -ur ncbisrc/src/util/compress/bzip2/bzlib.c ncbisrc2/src/util/compress/bzip2/bzlib.c
5289 --- ncbisrc/src/util/compress/bzip2/bzlib.c 2003-04-07 13:15:37.000000000 -0700
5290 +++ ncbisrc2/src/util/compress/bzip2/bzlib.c 2009-03-30 09:17:24.424885700 -0700
5291 @@ -1,3 +1,4 @@
5292 +#include <string.h>
5293
5294 /*-------------------------------------------------------------*/
5295 /*--- Library top-level functions. ---*/
5296 diff -ur ncbisrc/src/util/compress/bzip2.cpp ncbisrc2/src/util/compress/bzip2.cpp
5297 --- ncbisrc/src/util/compress/bzip2.cpp 2007-10-10 12:03:47.000000000 -0700
5298 +++ ncbisrc2/src/util/compress/bzip2.cpp 2009-03-30 09:17:24.401551798 -0700
5299 @@ -1,3 +1,4 @@
5300 +#include <string.h>
5301 /* $Id: bzip2.cpp 112032 2007-10-10 19:03:47Z ivanovp $
5302 * ===========================================================================
5303 *
5304 diff -ur ncbisrc/src/util/compress/lzo.cpp ncbisrc2/src/util/compress/lzo.cpp
5305 --- ncbisrc/src/util/compress/lzo.cpp 2007-10-10 12:03:47.000000000 -0700
5306 +++ ncbisrc2/src/util/compress/lzo.cpp 2009-03-30 09:17:24.421551614 -0700
5307 @@ -1,3 +1,4 @@
5308 +#include <string.h>
5309 /* $Id: lzo.cpp 112032 2007-10-10 19:03:47Z ivanovp $
5310 * ===========================================================================
5311 *
5312 diff -ur ncbisrc/src/util/compress/reader_zlib.cpp ncbisrc2/src/util/compress/reader_zlib.cpp
5313 --- ncbisrc/src/util/compress/reader_zlib.cpp 2007-05-04 10:18:18.000000000 -0700
5314 +++ ncbisrc2/src/util/compress/reader_zlib.cpp 2009-03-30 09:17:24.408217985 -0700
5315 @@ -1,3 +1,4 @@
5316 +#include <string.h>
5317 /* $Id: reader_zlib.cpp 103491 2007-05-04 17:18:18Z kazimird $
5318 * ===========================================================================
5319 * PUBLIC DOMAIN NOTICE
5320 diff -ur ncbisrc/src/util/compress/streambuf.cpp ncbisrc2/src/util/compress/streambuf.cpp
5321 --- ncbisrc/src/util/compress/streambuf.cpp 2008-10-29 11:58:59.000000000 -0700
5322 +++ ncbisrc2/src/util/compress/streambuf.cpp 2009-03-30 09:17:24.438177275 -0700
5323 @@ -1,3 +1,4 @@
5324 +#include <string.h>
5325 /* $Id: streambuf.cpp 144412 2008-10-29 18:58:59Z ivanov $
5326 * ===========================================================================
5327 *
5328 diff -ur ncbisrc/src/util/compress/tar.cpp ncbisrc2/src/util/compress/tar.cpp
5329 --- ncbisrc/src/util/compress/tar.cpp 2008-07-29 07:35:31.000000000 -0700
5330 +++ ncbisrc2/src/util/compress/tar.cpp 2009-03-30 09:17:24.414865344 -0700
5331 @@ -1,3 +1,4 @@
5332 +#include <string.h>
5333 /* $Id: tar.cpp 135841 2008-07-29 14:35:31Z lavr $
5334 * ===========================================================================
5335 *
5336 diff -ur ncbisrc/src/util/compress/zlib/ChangeLog ncbisrc2/src/util/compress/zlib/ChangeLog
5337 --- ncbisrc/src/util/compress/zlib/ChangeLog 2007-05-04 10:18:18.000000000 -0700
5338 +++ ncbisrc2/src/util/compress/zlib/ChangeLog 2009-03-30 09:17:24.458177286 -0700
5339 @@ -1,3 +1,4 @@
5340 +#include <string.h>
5341
5342 ChangeLog file for zlib
5343
5344 diff -ur ncbisrc/src/util/compress/zlib/deflate.c ncbisrc2/src/util/compress/zlib/deflate.c
5345 --- ncbisrc/src/util/compress/zlib/deflate.c 2005-08-02 09:56:02.000000000 -0700
5346 +++ ncbisrc2/src/util/compress/zlib/deflate.c 2009-03-30 09:17:24.471531732 -0700
5347 @@ -1,3 +1,4 @@
5348 +#include <string.h>
5349 /* deflate.c -- compress data using the deflation algorithm
5350 * Copyright (C) 1995-2005 Jean-loup Gailly.
5351 * For conditions of distribution and use, see copyright notice in zlib.h
5352 diff -ur ncbisrc/src/util/compress/zlib/example.c ncbisrc2/src/util/compress/zlib/example.c
5353 --- ncbisrc/src/util/compress/zlib/example.c 2005-08-02 09:56:02.000000000 -0700
5354 +++ ncbisrc2/src/util/compress/zlib/example.c 2009-03-30 09:17:24.461531978 -0700
5355 @@ -1,3 +1,4 @@
5356 +#include <string.h>
5357 /* example.c -- usage example of the zlib compression library
5358 * Copyright (C) 1995-2004 Jean-loup Gailly.
5359 * For conditions of distribution and use, see copyright notice in zlib.h
5360 diff -ur ncbisrc/src/util/compress/zlib/gzio.c ncbisrc2/src/util/compress/zlib/gzio.c
5361 --- ncbisrc/src/util/compress/zlib/gzio.c 2005-08-02 09:56:02.000000000 -0700
5362 +++ ncbisrc2/src/util/compress/zlib/gzio.c 2009-03-30 09:17:24.468238479 -0700
5363 @@ -1,3 +1,4 @@
5364 +#include <string.h>
5365 /* gzio.c -- IO on .gz files
5366 * Copyright (C) 1995-2005 Jean-loup Gailly.
5367 * For conditions of distribution and use, see copyright notice in zlib.h
5368 diff -ur ncbisrc/src/util/compress/zlib/infback.c ncbisrc2/src/util/compress/zlib/infback.c
5369 --- ncbisrc/src/util/compress/zlib/infback.c 2005-08-02 09:50:49.000000000 -0700
5370 +++ ncbisrc2/src/util/compress/zlib/infback.c 2009-03-30 09:17:24.444863996 -0700
5371 @@ -1,3 +1,4 @@
5372 +#include <string.h>
5373 /* infback.c -- inflate using a call-back interface
5374 * Copyright (C) 1995-2005 Mark Adler
5375 * For conditions of distribution and use, see copyright notice in zlib.h
5376 diff -ur ncbisrc/src/util/compress/zlib/inflate.c ncbisrc2/src/util/compress/zlib/inflate.c
5377 --- ncbisrc/src/util/compress/zlib/inflate.c 2005-08-02 09:56:02.000000000 -0700
5378 +++ ncbisrc2/src/util/compress/zlib/inflate.c 2009-03-30 09:17:24.451571504 -0700
5379 @@ -1,3 +1,4 @@
5380 +#include <string.h>
5381 /* inflate.c -- zlib decompression
5382 * Copyright (C) 1995-2005 Mark Adler
5383 * For conditions of distribution and use, see copyright notice in zlib.h
5384 diff -ur ncbisrc/src/util/compress/zlib/minigzip.c ncbisrc2/src/util/compress/zlib/minigzip.c
5385 --- ncbisrc/src/util/compress/zlib/minigzip.c 2005-08-02 09:56:02.000000000 -0700
5386 +++ ncbisrc2/src/util/compress/zlib/minigzip.c 2009-03-30 09:17:24.474845468 -0700
5387 @@ -1,3 +1,4 @@
5388 +#include <string.h>
5389 /* minigzip.c -- simulate gzip using the zlib compression library
5390 * Copyright (C) 1995-2005 Jean-loup Gailly.
5391 * For conditions of distribution and use, see copyright notice in zlib.h
5392 diff -ur ncbisrc/src/util/compress/zlib/zutil.c ncbisrc2/src/util/compress/zlib/zutil.c
5393 --- ncbisrc/src/util/compress/zlib/zutil.c 2005-08-02 09:56:02.000000000 -0700
5394 +++ ncbisrc2/src/util/compress/zlib/zutil.c 2009-03-30 09:17:24.454865040 -0700
5395 @@ -1,3 +1,4 @@
5396 +#include <string.h>
5397 /* zutil.c -- target dependent utility functions for the compression library
5398 * Copyright (C) 1995-2005 Jean-loup Gailly.
5399 * For conditions of distribution and use, see copyright notice in zlib.h
5400 diff -ur ncbisrc/src/util/compress/zlib.cpp ncbisrc2/src/util/compress/zlib.cpp
5401 --- ncbisrc/src/util/compress/zlib.cpp 2008-09-02 08:06:17.000000000 -0700
5402 +++ ncbisrc2/src/util/compress/zlib.cpp 2009-03-30 09:17:24.411552086 -0700
5403 @@ -1,3 +1,4 @@
5404 +#include <string.h>
5405 /* $Id: zlib.cpp 139071 2008-09-02 15:06:17Z ivanov $
5406 * ===========================================================================
5407 *
5408 diff -ur ncbisrc/src/util/creaders/alnread.c ncbisrc2/src/util/creaders/alnread.c
5409 --- ncbisrc/src/util/creaders/alnread.c 2007-12-29 10:17:25.000000000 -0800
5410 +++ ncbisrc2/src/util/creaders/alnread.c 2009-03-30 09:17:24.398197764 -0700
5411 @@ -1,3 +1,4 @@
5412 +#include <string.h>
5413 /*
5414 * $Id: alnread.c 116336 2007-12-29 18:17:25Z dicuccio $
5415 *
5416 diff -ur ncbisrc/src/util/dictionary_util.cpp ncbisrc2/src/util/dictionary_util.cpp
5417 --- ncbisrc/src/util/dictionary_util.cpp 2007-09-24 14:50:09.000000000 -0700
5418 +++ ncbisrc2/src/util/dictionary_util.cpp 2009-03-30 09:17:24.631653424 -0700
5419 @@ -1,3 +1,4 @@
5420 +#include <string.h>
5421 /* $Id: dictionary_util.cpp 111184 2007-09-24 21:50:09Z vasilche $
5422 * ===========================================================================
5423 *
5424 diff -ur ncbisrc/src/util/format_guess.cpp ncbisrc2/src/util/format_guess.cpp
5425 --- ncbisrc/src/util/format_guess.cpp 2008-06-23 14:09:25.000000000 -0700
5426 +++ ncbisrc2/src/util/format_guess.cpp 2009-03-30 09:17:24.618157642 -0700
5427 @@ -1,3 +1,4 @@
5428 +#include <string.h>
5429 /* $Id: format_guess.cpp 131881 2008-06-23 21:09:25Z quintosm $
5430 * ===========================================================================
5431 *
5432 diff -ur ncbisrc/src/util/image/demo/image_info.cpp ncbisrc2/src/util/image/demo/image_info.cpp
5433 --- ncbisrc/src/util/image/demo/image_info.cpp 2007-05-04 10:18:18.000000000 -0700
5434 +++ ncbisrc2/src/util/image/demo/image_info.cpp 2009-03-30 09:17:24.571510778 -0700
5435 @@ -1,3 +1,4 @@
5436 +#include <string.h>
5437 /* $Id: image_info.cpp 103491 2007-05-04 17:18:18Z kazimird $
5438 * ===========================================================================
5439 *
5440 diff -ur ncbisrc/src/util/image/image.cpp ncbisrc2/src/util/image/image.cpp
5441 --- ncbisrc/src/util/image/image.cpp 2007-10-10 12:03:47.000000000 -0700
5442 +++ ncbisrc2/src/util/image/image.cpp 2009-03-30 09:17:24.584823730 -0700
5443 @@ -1,3 +1,4 @@
5444 +#include <string.h>
5445 /* $Id: image.cpp 112032 2007-10-10 19:03:47Z ivanovp $
5446 * ===========================================================================
5447 *
5448 diff -ur ncbisrc/src/util/image/image_io.cpp ncbisrc2/src/util/image/image_io.cpp
5449 --- ncbisrc/src/util/image/image_io.cpp 2007-10-10 12:03:47.000000000 -0700
5450 +++ ncbisrc2/src/util/image/image_io.cpp 2009-03-30 09:17:24.591551637 -0700
5451 @@ -1,3 +1,4 @@
5452 +#include <string.h>
5453 /* $Id: image_io.cpp 112032 2007-10-10 19:03:47Z ivanovp $
5454 * ===========================================================================
5455 *
5456 diff -ur ncbisrc/src/util/image/image_io_gif.cpp ncbisrc2/src/util/image/image_io_gif.cpp
5457 --- ncbisrc/src/util/image/image_io_gif.cpp 2008-05-21 07:18:11.000000000 -0700
5458 +++ ncbisrc2/src/util/image/image_io_gif.cpp 2009-03-30 09:17:24.581531020 -0700
5459 @@ -1,3 +1,4 @@
5460 +#include <string.h>
5461 /* $Id: image_io_gif.cpp 128295 2008-05-21 14:18:11Z lavr $
5462 * ===========================================================================
5463 *
5464 diff -ur ncbisrc/src/util/image/image_io_jpeg.cpp ncbisrc2/src/util/image/image_io_jpeg.cpp
5465 --- ncbisrc/src/util/image/image_io_jpeg.cpp 2007-11-07 05:38:02.000000000 -0800
5466 +++ ncbisrc2/src/util/image/image_io_jpeg.cpp 2009-03-30 09:17:24.578218444 -0700
5467 @@ -1,3 +1,4 @@
5468 +#include <string.h>
5469 /* $Id: image_io_jpeg.cpp 113648 2007-11-07 13:38:02Z dicuccio $
5470 * ===========================================================================
5471 *
5472 diff -ur ncbisrc/src/util/image/image_io_png.cpp ncbisrc2/src/util/image/image_io_png.cpp
5473 --- ncbisrc/src/util/image/image_io_png.cpp 2008-05-21 07:18:11.000000000 -0700
5474 +++ ncbisrc2/src/util/image/image_io_png.cpp 2009-03-30 09:17:24.594845100 -0700
5475 @@ -1,3 +1,4 @@
5476 +#include <string.h>
5477 /* $Id: image_io_png.cpp 128295 2008-05-21 14:18:11Z lavr $
5478 * ===========================================================================
5479 *
5480 diff -ur ncbisrc/src/util/md5.cpp ncbisrc2/src/util/md5.cpp
5481 --- ncbisrc/src/util/md5.cpp 2007-05-04 10:18:18.000000000 -0700
5482 +++ ncbisrc2/src/util/md5.cpp 2009-03-30 09:17:24.611551326 -0700
5483 @@ -1,3 +1,4 @@
5484 +#include <string.h>
5485 /* $Id: md5.cpp 103491 2007-05-04 17:18:18Z kazimird $
5486 * ===========================================================================
5487 *
5488 diff -ur ncbisrc/src/util/qparse/parser.cpp ncbisrc2/src/util/qparse/parser.cpp
5489 --- ncbisrc/src/util/qparse/parser.cpp 2008-05-21 07:18:11.000000000 -0700
5490 +++ ncbisrc2/src/util/qparse/parser.cpp 2009-03-30 09:17:24.478198419 -0700
5491 @@ -1,3 +1,4 @@
5492 +#include <string.h>
5493 /* $Id: parser.cpp 128295 2008-05-21 14:18:11Z lavr $
5494 * ===========================================================================
5495 *
5496 diff -ur ncbisrc/src/util/qparse/query_parser_bison.tab.c ncbisrc2/src/util/qparse/query_parser_bison.tab.c
5497 --- ncbisrc/src/util/qparse/query_parser_bison.tab.c 2008-06-09 18:12:46.000000000 -0700
5498 +++ ncbisrc2/src/util/qparse/query_parser_bison.tab.c 2009-03-30 09:17:24.484824300 -0700
5499 @@ -1,3 +1,4 @@
5500 +#include <string.h>
5501 /* A Bison parser, made from query_parser_bison.y
5502 by GNU bison 1.35. */
5503
5504 diff -ur ncbisrc/src/util/regexp/demo/pcredemo.c ncbisrc2/src/util/regexp/demo/pcredemo.c
5505 --- ncbisrc/src/util/regexp/demo/pcredemo.c 2002-05-08 08:47:22.000000000 -0700
5506 +++ ncbisrc2/src/util/regexp/demo/pcredemo.c 2009-03-30 09:17:24.494844836 -0700
5507 @@ -1,3 +1,4 @@
5508 +#include <string.h>
5509 #include <stdio.h>
5510 #include <string.h>
5511 #include <pcre.h>
5512 diff -ur ncbisrc/src/util/regexp/demo/pcregrep.c ncbisrc2/src/util/regexp/demo/pcregrep.c
5513 --- ncbisrc/src/util/regexp/demo/pcregrep.c 2002-05-08 08:47:22.000000000 -0700
5514 +++ ncbisrc2/src/util/regexp/demo/pcregrep.c 2009-03-30 09:17:24.491530785 -0700
5515 @@ -1,3 +1,4 @@
5516 +#include <string.h>
5517 /*************************************************
5518 * pcregrep program *
5519 *************************************************/
5520 diff -ur ncbisrc/src/util/regexp/get.c ncbisrc2/src/util/regexp/get.c
5521 --- ncbisrc/src/util/regexp/get.c 2002-05-08 08:47:22.000000000 -0700
5522 +++ ncbisrc2/src/util/regexp/get.c 2009-03-30 09:17:24.504986660 -0700
5523 @@ -1,3 +1,4 @@
5524 +#include <string.h>
5525 /*************************************************
5526 * Perl-Compatible Regular Expressions *
5527 *************************************************/
5528 diff -ur ncbisrc/src/util/regexp/maketables.c ncbisrc2/src/util/regexp/maketables.c
5529 --- ncbisrc/src/util/regexp/maketables.c 2002-05-08 08:47:22.000000000 -0700
5530 +++ ncbisrc2/src/util/regexp/maketables.c 2009-03-30 09:17:24.518239256 -0700
5531 @@ -1,3 +1,4 @@
5532 +#include <string.h>
5533 /*************************************************
5534 * Perl-Compatible Regular Expressions *
5535 *************************************************/
5536 diff -ur ncbisrc/src/util/regexp/pcre.c ncbisrc2/src/util/regexp/pcre.c
5537 --- ncbisrc/src/util/regexp/pcre.c 2003-08-27 05:36:17.000000000 -0700
5538 +++ ncbisrc2/src/util/regexp/pcre.c 2009-03-30 09:17:24.508177521 -0700
5539 @@ -1,3 +1,4 @@
5540 +#include <string.h>
5541 /*************************************************
5542 * Perl-Compatible Regular Expressions *
5543 *************************************************/
5544 diff -ur ncbisrc/src/util/regexp/pcre_config.h ncbisrc2/src/util/regexp/pcre_config.h
5545 --- ncbisrc/src/util/regexp/pcre_config.h 2007-05-04 10:18:18.000000000 -0700
5546 +++ ncbisrc2/src/util/regexp/pcre_config.h 2009-03-30 09:24:05.157304754 -0700
5547 @@ -40,7 +40,7 @@
5548 /* Real configuration
5549 */
5550 #include <ncbiconf.h>
5551 -
5552 +#include <string.h>
5553
5554 /* PCRE is written in Standard C, but there are a few non-standard things it
5555 can cope with, allowing it to run on SunOS4 and other "close to standard"
5556 Only in ncbisrc2/src/util/regexp: pcre_config.h~
5557 diff -ur ncbisrc/src/util/regexp/pcre_internal.h ncbisrc2/src/util/regexp/pcre_internal.h
5558 --- ncbisrc/src/util/regexp/pcre_internal.h 2007-05-04 10:18:18.000000000 -0700
5559 +++ ncbisrc2/src/util/regexp/pcre_internal.h 2009-03-30 09:24:19.000202821 -0700
5560 @@ -36,6 +36,7 @@
5561 modules, but which are not relevant to the outside. */
5562
5563 #include "pcre_config.h"
5564 +#include <string.h>
5565
5566 /* To cope with SunOS4 and other systems that lack memmove() but have bcopy(),
5567 define a macro for memmove() if HAVE_MEMMOVE is false, provided that HAVE_BCOPY
5568 Only in ncbisrc2/src/util/regexp: pcre_internal.h~
5569 diff -ur ncbisrc/src/util/regexp/pcreposix.c ncbisrc2/src/util/regexp/pcreposix.c
5570 --- ncbisrc/src/util/regexp/pcreposix.c 2002-12-20 12:33:11.000000000 -0800
5571 +++ ncbisrc2/src/util/regexp/pcreposix.c 2009-03-30 09:17:24.521510793 -0700
5572 @@ -1,3 +1,4 @@
5573 +#include <string.h>
5574 /*************************************************
5575 * Perl-Compatible Regular Expressions *
5576 *************************************************/
5577 diff -ur ncbisrc/src/util/regexp/study.c ncbisrc2/src/util/regexp/study.c
5578 --- ncbisrc/src/util/regexp/study.c 2002-05-08 08:47:22.000000000 -0700
5579 +++ ncbisrc2/src/util/regexp/study.c 2009-03-30 09:17:24.488178345 -0700
5580 @@ -1,3 +1,4 @@
5581 +#include <string.h>
5582 /*************************************************
5583 * Perl-Compatible Regular Expressions *
5584 *************************************************/
5585 diff -ur ncbisrc/src/util/regexp/test/pcretest.c ncbisrc2/src/util/regexp/test/pcretest.c
5586 --- ncbisrc/src/util/regexp/test/pcretest.c 2004-06-09 08:17:21.000000000 -0700
5587 +++ ncbisrc2/src/util/regexp/test/pcretest.c 2009-03-30 09:17:24.501572103 -0700
5588 @@ -1,3 +1,4 @@
5589 +#include <string.h>
5590 /*************************************************
5591 * PCRE testing program *
5592 *************************************************/
5593 diff -ur ncbisrc/src/util/regexp/util/maketables.c ncbisrc2/src/util/regexp/util/maketables.c
5594 --- ncbisrc/src/util/regexp/util/maketables.c 2002-05-08 08:47:22.000000000 -0700
5595 +++ ncbisrc2/src/util/regexp/util/maketables.c 2009-03-30 09:17:24.511552027 -0700
5596 @@ -1,3 +1,4 @@
5597 +#include <string.h>
5598 /*************************************************
5599 * Perl-Compatible Regular Expressions *
5600 *************************************************/
5601 diff -ur ncbisrc/src/util/sequtil/sequtil_convert_imp.cpp ncbisrc2/src/util/sequtil/sequtil_convert_imp.cpp
5602 --- ncbisrc/src/util/sequtil/sequtil_convert_imp.cpp 2007-05-04 10:18:18.000000000 -0700
5603 +++ ncbisrc2/src/util/sequtil/sequtil_convert_imp.cpp 2009-03-30 09:17:24.601511662 -0700
5604 @@ -1,3 +1,4 @@
5605 +#include <string.h>
5606 /* $Id: sequtil_convert_imp.cpp 103491 2007-05-04 17:18:18Z kazimird $
5607 * ===========================================================================
5608 *
5609 diff -ur ncbisrc/src/util/smalldns.cpp ncbisrc2/src/util/smalldns.cpp
5610 --- ncbisrc/src/util/smalldns.cpp 2007-10-10 12:03:47.000000000 -0700
5611 +++ ncbisrc2/src/util/smalldns.cpp 2009-03-30 09:17:24.534885582 -0700
5612 @@ -1,3 +1,4 @@
5613 +#include <string.h>
5614 /* $Id: smalldns.cpp 112032 2007-10-10 19:03:47Z ivanovp $
5615 * ===========================================================================
5616 *
5617 diff -ur ncbisrc/src/util/strbuffer.cpp ncbisrc2/src/util/strbuffer.cpp
5618 --- ncbisrc/src/util/strbuffer.cpp 2007-10-10 12:03:47.000000000 -0700
5619 +++ ncbisrc2/src/util/strbuffer.cpp 2009-03-30 09:17:24.614823813 -0700
5620 @@ -1,3 +1,4 @@
5621 +#include <string.h>
5622 /* $Id: strbuffer.cpp 112032 2007-10-10 19:03:47Z ivanovp $
5623 * ===========================================================================
5624 *
5625 diff -ur ncbisrc/src/util/tables/raw_scoremat.c ncbisrc2/src/util/tables/raw_scoremat.c
5626 --- ncbisrc/src/util/tables/raw_scoremat.c 2008-08-22 07:43:58.000000000 -0700
5627 +++ ncbisrc2/src/util/tables/raw_scoremat.c 2009-03-30 09:17:24.641510613 -0700
5628 @@ -1,3 +1,4 @@
5629 +#include <string.h>
5630 /* $Id: raw_scoremat.c 138208 2008-08-22 14:43:58Z ucko $
5631 * ===========================================================================
5632 *
5633 diff -ur ncbisrc/src/util/tables/test/test_scoremat.cpp ncbisrc2/src/util/tables/test/test_scoremat.cpp
5634 --- ncbisrc/src/util/tables/test/test_scoremat.cpp 2007-05-04 10:18:18.000000000 -0700
5635 +++ ncbisrc2/src/util/tables/test/test_scoremat.cpp 2009-03-30 09:17:24.634884620 -0700
5636 @@ -1,3 +1,4 @@
5637 +#include <string.h>
5638 /* $Id: test_scoremat.cpp 103491 2007-05-04 17:18:18Z kazimird $
5639 * ===========================================================================
5640 *
5641 diff -ur ncbisrc/src/util/test/test_checksum.cpp ncbisrc2/src/util/test/test_checksum.cpp
5642 --- ncbisrc/src/util/test/test_checksum.cpp 2007-05-04 10:18:18.000000000 -0700
5643 +++ ncbisrc2/src/util/test/test_checksum.cpp 2009-03-30 09:17:24.551490589 -0700
5644 @@ -1,3 +1,4 @@
5645 +#include <string.h>
5646 /* $Id: test_checksum.cpp 103491 2007-05-04 17:18:18Z kazimird $
5647 * ===========================================================================
5648 *
5649 diff -ur ncbisrc/src/util/test/test_compress.cpp ncbisrc2/src/util/test/test_compress.cpp
5650 --- ncbisrc/src/util/test/test_compress.cpp 2008-05-20 09:14:25.000000000 -0700
5651 +++ ncbisrc2/src/util/test/test_compress.cpp 2009-03-30 09:17:24.564864589 -0700
5652 @@ -1,3 +1,4 @@
5653 +#include <string.h>
5654 /* $Id: test_compress.cpp 128102 2008-05-20 16:14:25Z ivanov $
5655 * ===========================================================================
5656 *
5657 diff -ur ncbisrc/src/util/test/test_compress_mt.cpp ncbisrc2/src/util/test/test_compress_mt.cpp
5658 --- ncbisrc/src/util/test/test_compress_mt.cpp 2008-05-20 09:14:25.000000000 -0700
5659 +++ ncbisrc2/src/util/test/test_compress_mt.cpp 2009-03-30 09:17:24.568177334 -0700
5660 @@ -1,3 +1,4 @@
5661 +#include <string.h>
5662 /* $Id: test_compress_mt.cpp 128102 2008-05-20 16:14:25Z ivanov $
5663 * ===========================================================================
5664 *
5665 diff -ur ncbisrc/src/util/test/test_logrotate.cpp ncbisrc2/src/util/test/test_logrotate.cpp
5666 --- ncbisrc/src/util/test/test_logrotate.cpp 2007-05-04 10:18:18.000000000 -0700
5667 +++ ncbisrc2/src/util/test/test_logrotate.cpp 2009-03-30 09:17:24.544865070 -0700
5668 @@ -1,3 +1,4 @@
5669 +#include <string.h>
5670 /* $Id: test_logrotate.cpp 103491 2007-05-04 17:18:18Z kazimird $
5671 * ===========================================================================
5672 *
5673 diff -ur ncbisrc/src/util/test/test_rangemap.cpp ncbisrc2/src/util/test/test_rangemap.cpp
5674 --- ncbisrc/src/util/test/test_rangemap.cpp 2007-05-04 10:18:18.000000000 -0700
5675 +++ ncbisrc2/src/util/test/test_rangemap.cpp 2009-03-30 09:17:24.561531787 -0700
5676 @@ -1,3 +1,4 @@
5677 +#include <string.h>
5678 /* $Id: test_rangemap.cpp 103491 2007-05-04 17:18:18Z kazimird $
5679 * ===========================================================================
5680 *
5681 diff -ur ncbisrc/src/util/test/test_strsearch.cpp ncbisrc2/src/util/test/test_strsearch.cpp
5682 --- ncbisrc/src/util/test/test_strsearch.cpp 2007-05-04 10:18:18.000000000 -0700
5683 +++ ncbisrc2/src/util/test/test_strsearch.cpp 2009-03-30 09:17:24.538177397 -0700
5684 @@ -1,3 +1,4 @@
5685 +#include <string.h>
5686 /* $Id: test_strsearch.cpp 103491 2007-05-04 17:18:18Z kazimird $
5687 * ===========================================================================
5688 *
5689 diff -ur ncbisrc/src/util/test/test_transmissionrw.cpp ncbisrc2/src/util/test/test_transmissionrw.cpp
5690 --- ncbisrc/src/util/test/test_transmissionrw.cpp 2007-05-04 10:18:18.000000000 -0700
5691 +++ ncbisrc2/src/util/test/test_transmissionrw.cpp 2009-03-30 09:17:24.554864995 -0700
5692 @@ -1,3 +1,4 @@
5693 +#include <string.h>
5694 /* $Id: test_transmissionrw.cpp 103491 2007-05-04 17:18:18Z kazimird $
5695 * ===========================================================================
5696 *
5697 diff -ur ncbisrc/src/util/test/test_uttp.cpp ncbisrc2/src/util/test/test_uttp.cpp
5698 --- ncbisrc/src/util/test/test_uttp.cpp 2008-05-21 07:18:11.000000000 -0700
5699 +++ ncbisrc2/src/util/test/test_uttp.cpp 2009-03-30 09:17:24.548217944 -0700
5700 @@ -1,3 +1,4 @@
5701 +#include <string.h>
5702 /* $Id: test_uttp.cpp 128295 2008-05-21 14:18:11Z lavr $
5703 * ===========================================================================
5704 *
5705 diff -ur ncbisrc/src/util/unicode.cpp ncbisrc2/src/util/unicode.cpp
5706 --- ncbisrc/src/util/unicode.cpp 2008-03-10 07:43:58.000000000 -0700
5707 +++ ncbisrc2/src/util/unicode.cpp 2009-03-30 09:17:24.644824145 -0700
5708 @@ -1,3 +1,4 @@
5709 +#include <string.h>
5710 /* $Id: unicode.cpp 121614 2008-03-10 14:43:58Z gouriano $
5711 * ==========================================================================
5712 *
5713 diff -ur ncbisrc/src/util/uttp.cpp ncbisrc2/src/util/uttp.cpp
5714 --- ncbisrc/src/util/uttp.cpp 2008-05-05 14:02:58.000000000 -0700
5715 +++ ncbisrc2/src/util/uttp.cpp 2009-03-30 09:17:24.391490629 -0700
5716 @@ -1,3 +1,4 @@
5717 +#include <string.h>
5718 /* $Id: uttp.cpp 126800 2008-05-05 21:02:58Z joukovv $
5719 * ===========================================================================
5720 *
5721 diff -ur ncbisrc/src/util/xregexp/regexp.cpp ncbisrc2/src/util/xregexp/regexp.cpp
5722 --- ncbisrc/src/util/xregexp/regexp.cpp 2008-08-20 08:41:41.000000000 -0700
5723 +++ ncbisrc2/src/util/xregexp/regexp.cpp 2009-03-30 09:17:24.524905703 -0700
5724 @@ -1,3 +1,4 @@
5725 +#include <string.h>
5726 /* $Id: regexp.cpp 137965 2008-08-20 15:41:41Z ivanov $
5727 * ===========================================================================
5728 *
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