Add empty line after package statement for $VERSION (for dzils's [PkgVersion])
commit5409911d573591c30650454f81e362b35451bd66
authorCarnë Draug <carandraug+dev@gmail.com>
Mon, 11 Feb 2019 14:02:37 +0000 (11 14:02 +0000)
committerCarnë Draug <carandraug+dev@gmail.com>
Mon, 11 Feb 2019 14:02:37 +0000 (11 14:02 +0000)
tree72c4fb0f761b8ac8ae4df290c8f2b846485ac6b9
parent0a502231a61fbbdb07ef53be11905875f0bb96ea
Add empty line after package statement for $VERSION (for dzils's [PkgVersion])
350 files changed:
lib/Bio/Align/AlignI.pm
lib/Bio/Align/DNAStatistics.pm
lib/Bio/Align/PairwiseStatistics.pm
lib/Bio/Align/ProteinStatistics.pm
lib/Bio/Align/StatisticsI.pm
lib/Bio/Align/Utilities.pm
lib/Bio/AlignIO/arp.pm
lib/Bio/AlignIO/bl2seq.pm
lib/Bio/AlignIO/clustalw.pm
lib/Bio/AlignIO/emboss.pm
lib/Bio/AlignIO/fasta.pm
lib/Bio/AlignIO/largemultifasta.pm
lib/Bio/AlignIO/maf.pm
lib/Bio/AlignIO/mase.pm
lib/Bio/AlignIO/mega.pm
lib/Bio/AlignIO/meme.pm
lib/Bio/AlignIO/metafasta.pm
lib/Bio/AlignIO/msf.pm
lib/Bio/AlignIO/nexus.pm
lib/Bio/AlignIO/pfam.pm
lib/Bio/AlignIO/phylip.pm
lib/Bio/AlignIO/po.pm
lib/Bio/AlignIO/proda.pm
lib/Bio/AlignIO/prodom.pm
lib/Bio/AlignIO/psi.pm
lib/Bio/AlignIO/selex.pm
lib/Bio/AlignIO/xmfa.pm
lib/Bio/AnalysisI.pm
lib/Bio/AnalysisParserI.pm
lib/Bio/AnalysisResultI.pm
lib/Bio/AnnotatableI.pm
lib/Bio/Annotation/AnnotationFactory.pm
lib/Bio/Annotation/Comment.pm
lib/Bio/Annotation/DBLink.pm
lib/Bio/Annotation/OntologyTerm.pm
lib/Bio/Annotation/Reference.pm
lib/Bio/Annotation/Relation.pm
lib/Bio/Annotation/SimpleValue.pm
lib/Bio/Annotation/StructuredValue.pm
lib/Bio/Annotation/TagTree.pm
lib/Bio/Annotation/Target.pm
lib/Bio/Annotation/Tree.pm
lib/Bio/Annotation/TypeManager.pm
lib/Bio/AnnotationCollectionI.pm
lib/Bio/AnnotationI.pm
lib/Bio/CodonUsage/IO.pm
lib/Bio/CodonUsage/Table.pm
lib/Bio/DB/DBFetch.pm
lib/Bio/DB/Fasta.pm
lib/Bio/DB/GenericWebAgent.pm
lib/Bio/DB/IndexedBase.pm
lib/Bio/DB/Qual.pm
lib/Bio/DB/Query/WebQuery.pm
lib/Bio/DB/QueryI.pm
lib/Bio/DB/Taxonomy.pm
lib/Bio/DB/WebDBSeqI.pm
lib/Bio/DBLinkContainerI.pm
lib/Bio/Das/FeatureTypeI.pm
lib/Bio/Das/SegmentI.pm
lib/Bio/DasI.pm
lib/Bio/DescribableI.pm
lib/Bio/Event/EventGeneratorI.pm
lib/Bio/Event/EventHandlerI.pm
lib/Bio/Factory/AnalysisI.pm
lib/Bio/Factory/ApplicationFactoryI.pm
lib/Bio/Factory/DriverFactory.pm
lib/Bio/Factory/FTLocationFactory.pm
lib/Bio/Factory/LocationFactoryI.pm
lib/Bio/Factory/ObjectBuilderI.pm
lib/Bio/Factory/ObjectFactory.pm
lib/Bio/Factory/ObjectFactoryI.pm
lib/Bio/Factory/SeqAnalysisParserFactory.pm
lib/Bio/Factory/SeqAnalysisParserFactoryI.pm
lib/Bio/Factory/SequenceProcessorI.pm
lib/Bio/Factory/SequenceStreamI.pm
lib/Bio/Factory/TreeFactoryI.pm
lib/Bio/FeatureHolderI.pm
lib/Bio/HandlerBaseI.pm
lib/Bio/IdCollectionI.pm
lib/Bio/IdentifiableI.pm
lib/Bio/Index/AbstractSeq.pm
lib/Bio/Index/Blast.pm
lib/Bio/Index/BlastTable.pm
lib/Bio/LocatableSeq.pm
lib/Bio/Location/Atomic.pm
lib/Bio/Location/AvWithinCoordPolicy.pm
lib/Bio/Location/CoordinatePolicyI.pm
lib/Bio/Location/Fuzzy.pm
lib/Bio/Location/FuzzyLocationI.pm
lib/Bio/Location/NarrowestCoordPolicy.pm
lib/Bio/Location/Simple.pm
lib/Bio/Location/SplitLocationI.pm
lib/Bio/Location/WidestCoordPolicy.pm
lib/Bio/LocationI.pm
lib/Bio/Matrix/Generic.pm
lib/Bio/Matrix/IO.pm
lib/Bio/Matrix/IO/mlagan.pm
lib/Bio/Matrix/IO/phylip.pm
lib/Bio/Matrix/IO/scoring.pm
lib/Bio/Matrix/MatrixI.pm
lib/Bio/Matrix/Mlagan.pm
lib/Bio/Matrix/PSM/IO.pm
lib/Bio/Matrix/PSM/IO/mast.pm
lib/Bio/Matrix/PSM/IO/masta.pm
lib/Bio/Matrix/PSM/IO/meme.pm
lib/Bio/Matrix/PSM/IO/psiblast.pm
lib/Bio/Matrix/PSM/IO/transfac.pm
lib/Bio/Matrix/PSM/InstanceSite.pm
lib/Bio/Matrix/PSM/InstanceSiteI.pm
lib/Bio/Matrix/PSM/ProtMatrix.pm
lib/Bio/Matrix/PSM/ProtPsm.pm
lib/Bio/Matrix/PSM/Psm.pm
lib/Bio/Matrix/PSM/PsmHeaderI.pm
lib/Bio/Matrix/PSM/PsmI.pm
lib/Bio/Matrix/PSM/SiteMatrix.pm
lib/Bio/Matrix/PhylipDist.pm
lib/Bio/Matrix/Scoring.pm
lib/Bio/Ontology/DocumentRegistry.pm
lib/Bio/Ontology/GOterm.pm
lib/Bio/Ontology/InterProTerm.pm
lib/Bio/Ontology/OBOterm.pm
lib/Bio/Ontology/Ontology.pm
lib/Bio/Ontology/OntologyEngineI.pm
lib/Bio/Ontology/OntologyI.pm
lib/Bio/Ontology/OntologyStore.pm
lib/Bio/Ontology/Path.pm
lib/Bio/Ontology/PathI.pm
lib/Bio/Ontology/Relationship.pm
lib/Bio/Ontology/RelationshipFactory.pm
lib/Bio/Ontology/RelationshipI.pm
lib/Bio/Ontology/RelationshipType.pm
lib/Bio/Ontology/SimpleOntologyEngine.pm
lib/Bio/Ontology/Term.pm
lib/Bio/Ontology/TermFactory.pm
lib/Bio/Ontology/TermI.pm
lib/Bio/OntologyIO.pm
lib/Bio/OntologyIO/Handlers/BaseSAXHandler.pm
lib/Bio/OntologyIO/Handlers/InterProHandler.pm
lib/Bio/OntologyIO/Handlers/InterPro_BioSQL_Handler.pm
lib/Bio/OntologyIO/InterProParser.pm
lib/Bio/ParameterBaseI.pm
lib/Bio/PrimarySeqI.pm
lib/Bio/Root/Exception.pm
lib/Bio/Root/Root.pm
lib/Bio/Root/RootI.pm
lib/Bio/Root/Storable.pm
lib/Bio/Root/Test.pm
lib/Bio/Root/Utilities.pm
lib/Bio/Root/Version.pm
lib/Bio/Search/BlastStatistics.pm
lib/Bio/Search/GenericStatistics.pm
lib/Bio/Search/HSP/FastaHSP.pm
lib/Bio/Search/HSP/GenericHSP.pm
lib/Bio/Search/HSP/HSPFactory.pm
lib/Bio/Search/HSP/ModelHSP.pm
lib/Bio/Search/HSP/PSLHSP.pm
lib/Bio/Search/HSP/WABAHSP.pm
lib/Bio/Search/Hit/BlastHit.pm
lib/Bio/Search/Hit/GenericHit.pm
lib/Bio/Search/Hit/HitFactory.pm
lib/Bio/Search/Iteration/GenericIteration.pm
lib/Bio/Search/Result/BlastResult.pm
lib/Bio/Search/Result/CrossMatchResult.pm
lib/Bio/Search/Result/GenericResult.pm
lib/Bio/Search/Result/INFERNALResult.pm
lib/Bio/Search/Result/ResultFactory.pm
lib/Bio/Search/Result/WABAResult.pm
lib/Bio/Search/StatisticsI.pm
lib/Bio/Search/Tiling/MapTileUtils.pm
lib/Bio/Search/Tiling/MapTiling.pm
lib/Bio/Search/Tiling/TilingI.pm
lib/Bio/SearchIO.pm
lib/Bio/SearchIO/EventHandlerI.pm
lib/Bio/SearchIO/FastHitEventBuilder.pm
lib/Bio/SearchIO/Writer/GbrowseGFF.pm
lib/Bio/SearchIO/Writer/HTMLResultWriter.pm
lib/Bio/SearchIO/Writer/TextResultWriter.pm
lib/Bio/SearchIO/axt.pm
lib/Bio/SearchIO/blasttable.pm
lib/Bio/SearchIO/cross_match.pm
lib/Bio/SearchIO/erpin.pm
lib/Bio/SearchIO/exonerate.pm
lib/Bio/SearchIO/fasta.pm
lib/Bio/SearchIO/gmap_f9.pm
lib/Bio/SearchIO/infernal.pm
lib/Bio/SearchIO/megablast.pm
lib/Bio/SearchIO/psl.pm
lib/Bio/SearchIO/rnamotif.pm
lib/Bio/SearchIO/waba.pm
lib/Bio/SearchIO/wise.pm
lib/Bio/Seq.pm
lib/Bio/Seq/BaseSeqProcessor.pm
lib/Bio/Seq/LargeLocatableSeq.pm
lib/Bio/Seq/LargePrimarySeq.pm
lib/Bio/Seq/LargeSeq.pm
lib/Bio/Seq/LargeSeqI.pm
lib/Bio/Seq/Meta.pm
lib/Bio/Seq/Meta/Array.pm
lib/Bio/Seq/MetaI.pm
lib/Bio/Seq/QualI.pm
lib/Bio/Seq/Quality.pm
lib/Bio/Seq/RichSeq.pm
lib/Bio/Seq/RichSeqI.pm
lib/Bio/Seq/SeqBuilder.pm
lib/Bio/Seq/SeqFactory.pm
lib/Bio/Seq/SeqFastaSpeedFactory.pm
lib/Bio/Seq/TraceI.pm
lib/Bio/SeqAnalysisParserI.pm
lib/Bio/SeqFeature/AnnotationAdaptor.pm
lib/Bio/SeqFeature/Collection.pm
lib/Bio/SeqFeature/CollectionI.pm
lib/Bio/SeqFeature/Computation.pm
lib/Bio/SeqFeature/FeaturePair.pm
lib/Bio/SeqFeature/Gene/Exon.pm
lib/Bio/SeqFeature/Gene/ExonI.pm
lib/Bio/SeqFeature/Gene/GeneStructure.pm
lib/Bio/SeqFeature/Gene/GeneStructureI.pm
lib/Bio/SeqFeature/Gene/Intron.pm
lib/Bio/SeqFeature/Gene/NC_Feature.pm
lib/Bio/SeqFeature/Gene/Poly_A_site.pm
lib/Bio/SeqFeature/Gene/Promoter.pm
lib/Bio/SeqFeature/Gene/Transcript.pm
lib/Bio/SeqFeature/Gene/TranscriptI.pm
lib/Bio/SeqFeature/Gene/UTR.pm
lib/Bio/SeqFeature/Generic.pm
lib/Bio/SeqFeature/PositionProxy.pm
lib/Bio/SeqFeature/Similarity.pm
lib/Bio/SeqFeature/SimilarityPair.pm
lib/Bio/SeqFeature/Tools/FeatureNamer.pm
lib/Bio/SeqFeature/Tools/IDHandler.pm
lib/Bio/SeqFeature/Tools/TypeMapper.pm
lib/Bio/SeqFeature/Tools/Unflattener.pm
lib/Bio/SeqFeatureI.pm
lib/Bio/SeqI.pm
lib/Bio/SeqIO/FTHelper.pm
lib/Bio/SeqIO/Handler/GenericRichSeqHandler.pm
lib/Bio/SeqIO/MultiFile.pm
lib/Bio/SeqIO/ace.pm
lib/Bio/SeqIO/asciitree.pm
lib/Bio/SeqIO/bsml.pm
lib/Bio/SeqIO/bsml_sax.pm
lib/Bio/SeqIO/embl.pm
lib/Bio/SeqIO/embldriver.pm
lib/Bio/SeqIO/fasta.pm
lib/Bio/SeqIO/fastq.pm
lib/Bio/SeqIO/game/gameSubs.pm
lib/Bio/SeqIO/gbdriver.pm
lib/Bio/SeqIO/gbxml.pm
lib/Bio/SeqIO/gcg.pm
lib/Bio/SeqIO/genbank.pm
lib/Bio/SeqIO/interpro.pm
lib/Bio/SeqIO/kegg.pm
lib/Bio/SeqIO/largefasta.pm
lib/Bio/SeqIO/metafasta.pm
lib/Bio/SeqIO/msout.pm
lib/Bio/SeqIO/phd.pm
lib/Bio/SeqIO/pir.pm
lib/Bio/SeqIO/qual.pm
lib/Bio/SeqIO/raw.pm
lib/Bio/SeqIO/scf.pm
lib/Bio/SeqIO/swiss.pm
lib/Bio/SeqIO/swissdriver.pm
lib/Bio/SeqIO/tab.pm
lib/Bio/SeqIO/table.pm
lib/Bio/SeqIO/tigr.pm
lib/Bio/SeqIO/tigrxml.pm
lib/Bio/SeqUtils.pm
lib/Bio/SimpleAlign.pm
lib/Bio/SimpleAnalysisI.pm
lib/Bio/Species.pm
lib/Bio/Taxon.pm
lib/Bio/Tools/AnalysisResult.pm
lib/Bio/Tools/Blat.pm
lib/Bio/Tools/CodonTable.pm
lib/Bio/Tools/Coil.pm
lib/Bio/Tools/ECnumber.pm
lib/Bio/Tools/EMBOSS/Palindrome.pm
lib/Bio/Tools/EPCR.pm
lib/Bio/Tools/ESTScan.pm
lib/Bio/Tools/Eponine.pm
lib/Bio/Tools/Est2Genome.pm
lib/Bio/Tools/Fgenesh.pm
lib/Bio/Tools/FootPrinter.pm
lib/Bio/Tools/Genemark.pm
lib/Bio/Tools/Genewise.pm
lib/Bio/Tools/Genomewise.pm
lib/Bio/Tools/Genscan.pm
lib/Bio/Tools/Glimmer.pm
lib/Bio/Tools/Grail.pm
lib/Bio/Tools/MZEF.pm
lib/Bio/Tools/Match.pm
lib/Bio/Tools/OddCodes.pm
lib/Bio/Tools/Phylo/Gerp.pm
lib/Bio/Tools/Phylo/Molphy.pm
lib/Bio/Tools/Phylo/Molphy/Result.pm
lib/Bio/Tools/Phylo/Phylip/ProtDist.pm
lib/Bio/Tools/Prediction/Exon.pm
lib/Bio/Tools/Prediction/Gene.pm
lib/Bio/Tools/Prints.pm
lib/Bio/Tools/Profile.pm
lib/Bio/Tools/Promoterwise.pm
lib/Bio/Tools/PrositeScan.pm
lib/Bio/Tools/Pseudowise.pm
lib/Bio/Tools/QRNA.pm
lib/Bio/Tools/RandomDistFunctions.pm
lib/Bio/Tools/RepeatMasker.pm
lib/Bio/Tools/Run/Analysis.pm
lib/Bio/Tools/Run/AnalysisFactory.pm
lib/Bio/Tools/Run/GenericParameters.pm
lib/Bio/Tools/Run/ParametersI.pm
lib/Bio/Tools/Run/Phylo/PhyloBase.pm
lib/Bio/Tools/Run/WrapperBase.pm
lib/Bio/Tools/Run/WrapperBase/CommandExts.pm
lib/Bio/Tools/Seg.pm
lib/Bio/Tools/SeqPattern/Backtranslate.pm
lib/Bio/Tools/SeqStats.pm
lib/Bio/Tools/SeqWords.pm
lib/Bio/Tools/Signalp.pm
lib/Bio/Tools/Sim4/Exon.pm
lib/Bio/Tools/Sim4/Results.pm
lib/Bio/Tools/Spidey/Exon.pm
lib/Bio/Tools/Spidey/Results.pm
lib/Bio/Tools/TandemRepeatsFinder.pm
lib/Bio/Tools/TargetP.pm
lib/Bio/Tools/ipcress.pm
lib/Bio/Tools/isPcr.pm
lib/Bio/Tools/pICalculator.pm
lib/Bio/Tools/tRNAscanSE.pm
lib/Bio/Tree/AnnotatableNode.pm
lib/Bio/Tree/Compatible.pm
lib/Bio/Tree/DistanceFactory.pm
lib/Bio/Tree/Node.pm
lib/Bio/Tree/NodeI.pm
lib/Bio/Tree/NodeNHX.pm
lib/Bio/Tree/RandomFactory.pm
lib/Bio/Tree/Statistics.pm
lib/Bio/Tree/Tree.pm
lib/Bio/Tree/TreeI.pm
lib/Bio/TreeIO.pm
lib/Bio/TreeIO/TreeEventBuilder.pm
lib/Bio/TreeIO/cluster.pm
lib/Bio/TreeIO/lintree.pm
lib/Bio/TreeIO/newick.pm
lib/Bio/TreeIO/nexus.pm
lib/Bio/TreeIO/nhx.pm
lib/Bio/TreeIO/pag.pm
lib/Bio/TreeIO/phyloxml.pm
lib/Bio/TreeIO/tabtree.pm
lib/Bio/UpdateableSeqI.pm
lib/Bio/WebAgent.pm