test/6323840-ok.sqt

   1 H       SQTGenerator    greylag
   2 H       SQTGeneratorVersion     0.0
   3 H       Database        6323840_wSHUFFLED.fasta
   4 H       Parameter       TIC_cutoff_proportion   0.98
   5 H       Parameter       best_result_count       5
   6 H       Parameter       charge_limit    3
   7 H       Parameter       cleavage_motif  [X]|[X]
   8 H       Parameter       databases       6323840_wSHUFFLED.fasta
   9 H       Parameter       decoy_locus_prefix      SHUFFLED_
  10 H       Parameter       enable_pca_mods False
  11 H       Parameter       fragment_mass_tolerance 0.5
  12 H       Parameter       intensity_class_count   3
  13 H       Parameter       intensity_class_ratio   2.0
  14 H       Parameter       mass_regimes    [[('AVG', []), ('MONO', [])]]
  15 H       Parameter       max_parent_spectrum_mass        10000.0
  16 H       Parameter       maximum_missed_cleavage_sites   1
  17 H       Parameter       min_parent_spectrum_mass        0.0
  18 H       Parameter       min_peptide_length      5
  19 H       Parameter       parent_mz_tolerance     1.25
  20 H       Parameter       pervasive_mods  [(1, 57.0, False, 'C', None, None)]
  21 H       Parameter       potential_mod_limit     2
  22 H       Parameter       potential_mods  []
  23 R       0       A       71.0371137881
  24 R       0       C       103.009184479
  25 R       0       D       115.026943032
  26 R       0       E       129.042593097
  27 R       0       F       147.068413917
  28 R       0       G       57.0214637238
  29 R       0       H       137.058911863
  30 R       0       I       113.084063981
  31 R       0       K       128.094963018
  32 R       0       L       113.084063981
  33 R       0       M       131.040484608
  34 R       0       N       114.042927448
  35 R       0       P       97.0527638524
  36 R       0       Q       128.058577512
  37 R       0       R       156.101111029
  38 R       0       S       87.0320284102
  39 R       0       T       101.047678475
  40 R       0       V       99.0684139167
  41 R       0       W       186.079312954
  42 R       0       Y       163.063328539
  43 R       0       [       0
  44 R       0       ]       0
  45 S       1439    1439    2       0       honk    1745.15 19.0173 0       55
  46 M       1       1       1746.03756      0.0     48.5347 0       1       2       R.HSEFVAYPIQLLVTK.E     U
  47 L       gi|6323840|ref|NP_013911.1|     196
  48 M       2       2       1746.07901      0.8192  8.7774  0       1       2       S.KKTFEISPKSPIIKE.L     U
  49 L       gi|6323840|ref|NP_013911.1|     605
  50 M       3       3       1744.0728       0.8514  7.2124  0       1       2       E.VNERIGRGTVLRLFL.K     U
  51 L       gi|6323840|ref|NP_013911.1|     162
  52 M       4       4       1743.12795      0.8564  6.97    0       1       2       T.DIRAIKFRIILIRD.T      U
  53 L       SHUFFLED_gi|6323840|ref|NP_013911.1|    370
  54 M       5       5       1746.02269      0.8613  6.7306  0       1       2       A.MLIRKPDDRLSNWT.S      U
  55 L       SHUFFLED_gi|6323840|ref|NP_013911.1|    256