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2017-02-08	Mark Abraham	Remove docs for unimplemented trjconv -clustercenter	commit \| commitdiff \| tree
2017-02-07	Mark Abraham	Bumped version to prepare for next patch release	commit \| commitdiff \| tree
2017-02-07	Mark Abraham	Introduced system preparation section to user guide	commit \| commitdiff \| tree
2017-02-07	Mark Abraham	Version 2016.2	commit \| commitdiff \| tree
2017-02-05	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2017-02-02	Mark Abraham	Clarify use of tau-p and pcoupltype	commit \| commitdiff \| tree
2017-01-31	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2017-01-30	Mark Abraham	Fix multi-domain reruns	commit \| commitdiff \| tree
2017-01-30	Mark Abraham	Don't print invalid performance data	commit \| commitdiff \| tree
2017-01-22	Mark Abraham	Fixed gmx rmsf -q -oq.	commit \| commitdiff \| tree
2017-01-04	Mark Abraham	Stop trying to use objdump --reloc on Mac	commit \| commitdiff \| tree
2017-01-03	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2016-12-20	Mark Abraham	Corrected documentation about eigenvalue handling	commit \| commitdiff \| tree
2016-12-20	Mark Abraham	Improve build system for plugin support	commit \| commitdiff \| tree
2016-12-15	Mark Abraham	Handle warninp correctly in xpm2ps and membed	commit \| commitdiff \| tree
2016-12-14	Mark Abraham	Fix misleading parallelization docs for gmx wham	commit \| commitdiff \| tree
2016-12-09	Mark Abraham	Fix logic of TRR reading	commit \| commitdiff \| tree
2016-12-07	Mark Abraham	Fix memory handling in gmx dump of TNG files	commit \| commitdiff \| tree
2016-12-05	Mark Abraham	Remove undue narrowing of integer in TNG reading	commit \| commitdiff \| tree
2016-12-01	Mark Abraham	Fix minor trjconv bug	commit \| commitdiff \| tree
2016-10-28	Mark Abraham	Bumped version to prepare for next patch release	commit \| commitdiff \| tree
2016-10-28	Mark Abraham	Version 2016.1	commit \| commitdiff \| tree
2016-10-21	Mark Abraham	Update install guide	commit \| commitdiff \| tree
2016-10-18	Mark Abraham	Fix SIMD suggestion for VMX	commit \| commitdiff \| tree
2016-10-11	Mark Abraham	Update for FFTW 3.3.5	commit \| commitdiff \| tree
2016-10-07	Mark Abraham	Add script for Jenkins regressiontest update job	commit \| commitdiff \| tree
2016-10-03	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2016-10-03	Mark Abraham	Replace use of deprecated readdir_r	commit \| commitdiff \| tree
2016-09-08	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2016-09-08	Mark Abraham	Bumped patch number to prepare for future 5.1.5 release	commit \| commitdiff \| tree
2016-09-07	Mark Abraham	Version 5.1.4	commit \| commitdiff \| tree
2016-09-07	Mark Abraham	Removed HIS1 from oplsaa and charmm definitions	commit \| commitdiff \| tree
2016-09-07	Mark Abraham	Fix LYN charges in amber03	commit \| commitdiff \| tree
2016-09-07	Mark Abraham	Fix amber03 HIP charges	commit \| commitdiff \| tree
2016-09-06	Mark Abraham	Work around glibc 2.23 with CUDA	commit \| commitdiff \| tree
2016-08-27	Mark Abraham	Stop using gmx_fatal in grompp	commit \| commitdiff \| tree
2016-08-15	Mark Abraham	Fixes for BG/Q platform files and install guide	commit \| commitdiff \| tree
2016-08-12	Mark Abraham	Bump number to prepare for first patch release	commit \| commitdiff \| tree
2016-08-04	Mark Abraham	Version 2016	commit \| commitdiff \| tree
2016-07-29	Mark Abraham	Improve handling of gmock and gcc6	commit \| commitdiff \| tree
2016-07-29	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2016-07-28	Mark Abraham	Add toolchain flags for SSE2 compilation	commit \| commitdiff \| tree
2016-07-21	Mark Abraham	Bumped patch number to prepare for future 5.1.4 release	commit \| commitdiff \| tree
2016-07-14	Mark Abraham	Fix issues with using int for number of steps	commit \| commitdiff \| tree
2016-07-13	Mark Abraham	Version 5.1.3	commit \| commitdiff \| tree
2016-07-12	Mark Abraham	Fix trr magic number reading	commit \| commitdiff \| tree
2016-07-11	Mark Abraham	Fix gmx mdrun -membed -ntmpi -1	commit \| commitdiff \| tree
2016-07-11	Mark Abraham	Fix regressiontest download md5sum	commit \| commitdiff \| tree
2016-07-09	Mark Abraham	First 2016 release candidate	commit \| commitdiff \| tree
2016-07-08	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2016-07-08	Mark Abraham	Simplify SIMD compiler flag construction	commit \| commitdiff \| tree
2016-07-07	Mark Abraham	Move consistency check for number of threads	commit \| commitdiff \| tree
2016-07-07	Mark Abraham	Fix build if libcuda is found but nvcc is not	commit \| commitdiff \| tree
2016-07-04	Mark Abraham	Fixes for Power7 big-endian	commit \| commitdiff \| tree
2016-07-01	Mark Abraham	Fix use of _POSIX_THREAD*	commit \| commitdiff \| tree
2016-06-30	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2016-06-29	Mark Abraham	Refactor sysconf checking	commit \| commitdiff \| tree
2016-06-29	Mark Abraham	Work around glibc 2.23 with CUDA	commit \| commitdiff \| tree
2016-06-28	Mark Abraham	Update to include a gcc 6.1 configuration	commit \| commitdiff \| tree
2016-06-28	Mark Abraham	Fix SIMD configuration management	commit \| commitdiff \| tree
2016-06-27	Mark Abraham	Removed unnecessary inter-simulation signalling	commit \| commitdiff \| tree
2016-06-27	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2016-06-23	Mark Abraham	Allow use of external lmfit package	commit \| commitdiff \| tree
2016-06-23	Mark Abraham	Prevent use of mdrun -maxh -multi	commit \| commitdiff \| tree
2016-06-22	Mark Abraham	Fix configuration-time cpuinfo code	commit \| commitdiff \| tree
2016-06-22	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2016-06-22	Mark Abraham	Adjust and document C++11 compiler tests	commit \| commitdiff \| tree
2016-06-20	Mark Abraham	Update pre-submit matrix contents	commit \| commitdiff \| tree
2016-06-19	Mark Abraham	Improve docs for linking stdlibc++ needed by icc	commit \| commitdiff \| tree
2016-06-17	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2016-06-17	Mark Abraham	Fix multi-sim + DD + simple distance restraints	commit \| commitdiff \| tree
2016-06-10	Mark Abraham	Find python for docs build quietly	commit \| commitdiff \| tree
2016-06-08	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2016-06-07	Mark Abraham	Re-add support for linking against external TinyXML-2	commit \| commitdiff \| tree
2016-06-07	Mark Abraham	Updates to documentation	commit \| commitdiff \| tree
2016-06-02	Mark Abraham	Fix compatibility with older CMake	commit \| commitdiff \| tree
2016-06-02	Mark Abraham	Make more CMake variables advanced	commit \| commitdiff \| tree
2016-06-02	Mark Abraham	Ignore stderr when detecting SIMD and build info	commit \| commitdiff \| tree
2016-05-31	Mark Abraham	Fix reference to vmdio.c to be vmdio.cpp	commit \| commitdiff \| tree
2016-05-31	Mark Abraham	Second 2016 beta release	commit \| commitdiff \| tree
2016-05-29	Mark Abraham	Simplified and updated OpenCL compilation	commit \| commitdiff \| tree
2016-05-27	Mark Abraham	Fix reading of bonded tables	commit \| commitdiff \| tree
2016-05-26	Mark Abraham	New quote	commit \| commitdiff \| tree
2016-05-12	Mark Abraham	Merge branch release-5-1 into release-2016	commit \| commitdiff \| tree
2016-05-12	Mark Abraham	GROMACS 2016 beta1 release	commit \| commitdiff \| tree
2016-05-10	Mark Abraham	Bump clang static analyzer to version 3.8	commit \| commitdiff \| tree
2016-05-10	Mark Abraham	Minor update to sphinx dependency	commit \| commitdiff \| tree
2016-05-10	Mark Abraham	Facilitate linking with libcxx	commit \| commitdiff \| tree
2016-05-08	Mark Abraham	Fixes for clang 3.7 on PowerPC	commit \| commitdiff \| tree
2016-05-08	Mark Abraham	Fix constants, units and conversion factors	commit \| commitdiff \| tree
2016-04-27	Mark Abraham	Merge branch release-5-1	commit \| commitdiff \| tree
2016-04-19	Mark Abraham	Replace libxml2 with tinyxml2 for use in test code	commit \| commitdiff \| tree
2016-04-19	Mark Abraham	Fix parse_digits_from_string	commit \| commitdiff \| tree
2016-04-19	Mark Abraham	Fix mdp label generation	commit \| commitdiff \| tree
2016-04-18	Mark Abraham	Reduce compilation coupling of SIMD module	commit \| commitdiff \| tree
2016-04-14	Mark Abraham	Merge branch release-5-1	commit \| commitdiff \| tree
2016-04-01	Mark Abraham	Revert to treating -1 as "generate a seed" in .mdp	commit \| commitdiff \| tree
2016-03-31	Mark Abraham	Add test and improved docs for custom checkSequence	commit \| commitdiff \| tree
2016-03-30	Mark Abraham	Clean up vsite code	commit \| commitdiff \| tree
2016-03-19	Mark Abraham	Add more const correctness	commit \| commitdiff \| tree
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