run_cassava_production_server.sh

   1 #!/bin/bash
   2
   3 ### BEGIN INIT INFO
   4 # Provides:          scriptname
   5 # Required-Start:    $all
   6 # Required-Stop:
   7 # Default-Start:     2 3 4 5
   8 # Default-Stop:      0 1 6
   9 # Short-Description: Start daemon at boot time
  10 # Description:       Enable service provided by daemon.
  11 ### END INIT INFO
  12
  13
  14
  15 unset PERL5LIB
  16
  17 echo "PERL5LIB is now $PERL5LIB";
  18
  19 export PERL5LIB=/usr/local/share/cassava-site/cassava/lib:/usr/local/share/cassava-site/sgn/lib/:/usr/local/share/cassava-site/cxgn-corelibs/lib/:/usr/local/share/cassava-site/Phenome/lib/:/usr/local/share/cassava-site/tomato_genome/lib/:/usr/local/share/cassava-site/Cview/lib/:/usr/local/share/cassava-site/biosource/lib/:/usr/local/share/cassava-site/local-lib/lib/perl5:/usr/local/share/cassava-site/ITAG/lib/
  20
  21 echo "Starting catalyst server...";
  22
  23 echo "PERL5LIB is $PERL5LIB";
  24
  25 mkdir /tmp/sgn-tmp
  26
  27 screen ./bin/sgn_server.pl -r --fork
  28
  29 exit;
  30
  31
  32 ########
  33
  34 =head1 NAME
  35
  36 ./run_cassava_production_server.sh
  37
  38 =head1 DESCRIPTION
  39
  40 Use this script to run the cassavabase production server. It sets the PERL5LIB correctly for the production server environment, and then starts the Catalyst server. It does not restart the nginx server (maybe in the future). It also does not stop a running server.
  41
  42 =head1 AUTHOR
  43
  44 Lukas Mueller <lam87@cornell.edu>
  45
  46 =cut