cgi-bin/solanaceae-project/call_for_BACS.pl

   1 use strict;
   2 use CXGN::Page;
   3 my $page=CXGN::Page->new('call_for_BACS.html','html2pl converter');
   4 $page->header('Questionnaire for BAC informations from other group:');
   5 print<<END_HEREDOC;
   6
   7 <div class="Section1">
   8 <center>
   9 <h2>Call for anchored BACs</h2>
  10 <table summary="" width="80\%" align="center">
  11 <tr>
  12 <td>
  13 <p>Over the coming
  14 decade the International Solanaceae Genome Project (SOL) will
  15 create a coordinated network of knowledge about the Solanaceae
  16 family. The first goal for the SOL project is to sequence the
  17 gene-rich euchromatin in the tomato genome, which will serve as a
  18 reference genome for other Solanaceae and related plant taxa.</p>
  19
  20 <p>Currently, we are working on integrating the high density genetic
  21 map, based on an <em>L. esculentum</em> x <em>L. pennellii</em>
  22 F2 population (referred to as the F2.2000
  23 population), with the BAC physical map, which was generated by Dr.
  24 Wing's group at the AGI. We will have about 2000 'seed BACs' that
  25 are anchored onto the genetic map and will be used for the
  26 beginning of tomato sequencing project. Since we have a large
  27 Solanaceae community, some of you might already have worked on your
  28 favorite BACs that were isolated with markers from the genetic map.
  29 The anchoring information of your BACs would greatly increase the
  30 number of 'seed BACs'. If you have difficulty to sequence your
  31 favorite BACs, this might be a good opportunity to <strong>sequence your
  32 BACs without any extra costs if it is already known to be anchored
  33 via one or more markers on the genetic map. All you
  34 need to do is to send the BAC related information (which genetic marker(s) were used
  35 to isolate the BAC(s)), as listed in the attached file and in the
  36 example case, and your BAC clones to us.</strong> We will make all the possible efforts to
  37 sequence your BACs in a timely manner, although we don't guarantee
  38 this. Please note that we are not expecting any co-authorship on
  39 your future publications, but acknowledgement of our effort will be
  40 appreciated. All the sequences will be deposited to the
  41 <a href="index.pl">SGN</a> database and
  42 GenBank as part of the SOL sequencing project.</p>
  43
  44 <p>In order to better
  45 serve our community and finish the sequencing project efficiently,
  46 we are calling for the submission of anchored BAC clones from the
  47 LE_HBA library, which was made from <em>L. esculentum</em> cv. Heinz 1706.</p>
  48
  49 <p>If you have comments
  50 or problems, please contact <a href="mailto:lam87\@cornell.edu">Lukas Mueller</a> or
  51 <a href="mailto:yw84\@cornell.edu">Eileen Wang</a>.</p>
  52
  53 <p>Please use the form below to request your BAC to be sequenced.
  54 An example form is provided for help.</p>
  55
  56 <p><a href="/static_content/solanaceae-project/bac_info.txt">BAC Submission Form</a></p>
  57 <p><a href="/static_content/solanaceae-project/bac_info_example.txt">Example Form</a></p>
  58
  59 </td>
  60 </tr>
  61 </table>
  62 </center>
  63
  64 </div>
  65 END_HEREDOC
  66 $page->footer();