Merge pull request #2646 from solgenomics/topic/fix_cross
[sgn.git] / ontology / cxgn_plant_level.obo
blobeb093c59619c2f373a46cf24996acc1c87bd82b7
1 format-version: 1.0
2 data-version: 1
3 date: 05:23:2016 03:00
4 saved-by: sgn
5 default-namespace: cxgn_plant_level_ontology
6 remark: none
7 ontology: cxgn_plant_level
9 [Term]
10 id: PLANT_LEVEL:0000000
11 name: Plant_level
13 [Term]
14 id: PLANT_LEVEL:0000001
15 name: generation
16 def: "Categorical plant generations." []
17 is_a: PLANT_LEVEL:0000000
19 [Term]
20 id: PLANT_LEVEL:0000002
21 name: cycle 1
22 synonym: "C1" EXACT []
23 def: "First cycle (or ratoon one)." []
24 is_a: PLANT_LEVEL:0000001
26 [Term]
27 id: PLANT_LEVEL:0000003
28 name: cycle 2
29 synonym: "C2" EXACT []
30 def: "Second cycle (or ratoon two)." []
31 is_a: PLANT_LEVEL:0000001
33 [Term]
34 id: PLANT_LEVEL:0000004
35 name: cycle 3
36 synonym: "C3" EXACT []
37 def: "Third cycle (or ratoon three)." []
38 is_a: PLANT_LEVEL:0000001
40 [Term]
41 id: PLANT_LEVEL:0000069
42 name: cycle 4
43 synonym: "C4" EXACT []
44 def: "Fourth cycle (or ratoon four)." []
45 is_a: PLANT_LEVEL:0000001
47 [Term]
48 id: PLANT_LEVEL:0000070
49 name: cycle 5
50 synonym: "C5" EXACT []
51 def: "Fifth cycle (or ratoon five)." []
52 is_a: PLANT_LEVEL:0000001
54 [Term]
55 id: PLANT_LEVEL:0000071
56 name: cycle 6
57 synonym: "C6" EXACT []
58 def: "Sixth cycle (or ratoon six)." []
59 is_a: PLANT_LEVEL:0000001
61 [Term]
62 id: PLANT_LEVEL:0000005
63 name: leaf level
64 def: "Categorical leaf levels." []
65 is_a: PLANT_LEVEL:0000000
67 [Term]
68 id: PLANT_LEVEL:0000006
69 name: leaf rank 01
70 synonym: "LFRK01" EXACT []
71 def: "First standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
72 is_a: PLANT_LEVEL:0000005
74 [Term]
75 id: PLANT_LEVEL:0000007
76 name: leaf rank 02
77 synonym: "LFRK02" EXACT []
78 def: "Second standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
79 is_a: PLANT_LEVEL:0000005
81 [Term]
82 id: PLANT_LEVEL:0000008
83 name: leaf rank 03
84 synonym: "LFRK03" EXACT []
85 def: "Third standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
86 is_a: PLANT_LEVEL:0000005
88 [Term]
89 id: PLANT_LEVEL:0000009
90 name: leaf rank 04
91 synonym: "LFRK04" EXACT []
92 def: "Fourth standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
93 is_a: PLANT_LEVEL:0000005
95 [Term]
96 id: PLANT_LEVEL:0000010
97 name: leaf rank 05
98 synonym: "LFRK05" EXACT []
99 def: "Fifth standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
100 is_a: PLANT_LEVEL:0000005
102 [Term]
103 id: PLANT_LEVEL:0000011
104 name: leaf rank 06
105 synonym: "LFRK06" EXACT []
106 def: "Sixth standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
107 is_a: PLANT_LEVEL:0000005
109 [Term]
110 id: PLANT_LEVEL:0000012
111 name: leaf rank 07
112 synonym: "LFRK07" EXACT []
113 def: "Seventh standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
114 is_a: PLANT_LEVEL:0000005
116 [Term]
117 id: PLANT_LEVEL:0000013
118 name: leaf rank 08
119 synonym: "LFRK08" EXACT []
120 def: "First standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
121 is_a: PLANT_LEVEL:0000005
123 [Term]
124 id: PLANT_LEVEL:0000014
125 name: leaf rank 09
126 synonym: "LFRK09" EXACT []
127 def: "Ninth standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
128 is_a: PLANT_LEVEL:0000005
130 [Term]
131 id: PLANT_LEVEL:0000015
132 name: leaf rank 10
133 synonym: "LFRK10" EXACT []
134 def: "Tenth standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
135 is_a: PLANT_LEVEL:0000005
137 [Term]
138 id: PLANT_LEVEL:0000016
139 name: leaf rank 11
140 synonym: "LFRK11" EXACT []
141 def: "Eleventh standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
142 is_a: PLANT_LEVEL:0000005
144 [Term]
145 id: PLANT_LEVEL:0000017
146 name: leaf rank 12
147 synonym: "LFRK12" EXACT []
148 def: "Twelfth standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
149 is_a: PLANT_LEVEL:0000005
151 [Term]
152 id: PLANT_LEVEL:0000018
153 name: leaf rank 13
154 synonym: "LFRK13" EXACT []
155 def: "Thirteenth standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
156 is_a: PLANT_LEVEL:0000005
158 [Term]
159 id: PLANT_LEVEL:0000019
160 name: leaf rank 14
161 synonym: "LFRK14" EXACT []
162 def: "Fourteenth standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
163 is_a: PLANT_LEVEL:0000005
165 [Term]
166 id: PLANT_LEVEL:0000020
167 name: leaf rank 15
168 synonym: "LFRK15" EXACT []
169 def: "Fifteenth standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
170 is_a: PLANT_LEVEL:0000005
172 [Term]
173 id: PLANT_LEVEL:0000021
174 name: leaf rank 16
175 synonym: "LFRK16" EXACT []
176 def: "Sixteenth standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
177 is_a: PLANT_LEVEL:0000005
179 [Term]
180 id: PLANT_LEVEL:0000022
181 name: leaf rank 17
182 synonym: "LFRK17" EXACT []
183 def: "First standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
184 is_a: PLANT_LEVEL:0000005
186 [Term]
187 id: PLANT_LEVEL:0000023
188 name: leaf rank 18
189 synonym: "LFRK18" EXACT []
190 def: "Eighteenth standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
191 is_a: PLANT_LEVEL:0000005
193 [Term]
194 id: PLANT_LEVEL:0000024
195 name: leaf rank 19
196 synonym: "LFRK19" EXACT []
197 def: "Nineteenth standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
198 is_a: PLANT_LEVEL:0000005
200 [Term]
201 id: PLANT_LEVEL:0000025
202 name: leaf rank 20
203 synonym: "LFRK20" EXACT []
204 def: "First standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
205 is_a: PLANT_LEVEL:0000005
207 [Term]
208 id: PLANT_LEVEL:0000026
209 name: leaf rank 21
210 synonym: "LFRK21" EXACT []
211 def: "Twenty first standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
212 is_a: PLANT_LEVEL:0000005
214 [Term]
215 id: PLANT_LEVEL:0000027
216 name: leaf rank 22
217 synonym: "LFRK22" EXACT []
218 def: "Twenty second standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
219 is_a: PLANT_LEVEL:0000005
221 [Term]
222 id: PLANT_LEVEL:0000028
223 name: leaf rank 23
224 synonym: "LFRK23" EXACT []
225 def: "Twenty third standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
226 is_a: PLANT_LEVEL:0000005
228 [Term]
229 id: PLANT_LEVEL:0000029
230 name: leaf rank 24
231 synonym: "LFRK24" EXACT []
232 def: "Twenty fourth standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
233 is_a: PLANT_LEVEL:0000005
235 [Term]
236 id: PLANT_LEVEL:0000030
237 name: leaf rank 25
238 synonym: "LFRK25" EXACT []
239 def: "Twenty fifth standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
240 is_a: PLANT_LEVEL:0000005
242 [Term]
243 id: PLANT_LEVEL:0000031
244 name: leaf rank 26
245 synonym: "LFRK26" EXACT []
246 def: "Twenty fourth standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
247 is_a: PLANT_LEVEL:0000005
249 [Term]
250 id: PLANT_LEVEL:0000032
251 name: leaf rank 27
252 synonym: "LFRK27" EXACT []
253 def: "Twenty seventh standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
254 is_a: PLANT_LEVEL:0000005
256 [Term]
257 id: PLANT_LEVEL:0000033
258 name: leaf rank 28
259 synonym: "LFRK28" EXACT []
260 def: "Twenty eighth standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
261 is_a: PLANT_LEVEL:0000005
263 [Term]
264 id: PLANT_LEVEL:0000034
265 name: leaf rank 29
266 synonym: "LFRK29" EXACT []
267 def: "Twenty ninth standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
268 is_a: PLANT_LEVEL:0000005
270 [Term]
271 id: PLANT_LEVEL:0000035
272 name: leaf rank 30
273 synonym: "LFRK30" EXACT []
274 def: "Thirtiest standing leaf, counting the rank by starting with youngest completly unrolled leaf as 1 and moving downwards." []
275 is_a: PLANT_LEVEL:0000005
277 [Term]
278 id: PLANT_LEVEL:0000036
279 name: hand rank
280 def: "Record the rank (order) of a hand in the bunch, starting with the hand at the proximal end (closest to the pseudostem) of the bunch as "1" and continuing to the hand at the most distal end (closest to the male bud)." []
281 is_a: PLANT_LEVEL:0000000
283 [Term]
284 id: PLANT_LEVEL:0000037
285 name: hand rank 01
286 synonym: "HDRK01" EXACT []
287 def: "Record the first rank hand " []
288 is_a: PLANT_LEVEL:0000036
290 [Term]
291 id: PLANT_LEVEL:0000038
292 name: hand rank 02
293 synonym: "HDRK02" EXACT []
294 def: "Record the second rank hand " []
295 is_a: PLANT_LEVEL:0000036
297 [Term]
298 id: PLANT_LEVEL:0000039
299 name: hand rank 03
300 synonym: "HDRK03" EXACT []
301 def: "Record the third rank hand " []
302 is_a: PLANT_LEVEL:0000036
304 [Term]
305 id: PLANT_LEVEL:0000040
306 name: hand rank 04
307 synonym: "HDRK04" EXACT []
308 def: "Record the fourth rank hand " []
309 is_a: PLANT_LEVEL:0000036
311 [Term]
312 id: PLANT_LEVEL:0000041
313 name: hand rank 05
314 synonym: "HDRK05" EXACT []
315 def: "Record the fifth rank hand " []
316 is_a: PLANT_LEVEL:0000036
318 [Term]
319 id: PLANT_LEVEL:0000042
320 name: hand rank 06
321 synonym: "HDRK06" EXACT []
322 def: "Record the sixth rank hand " []
323 is_a: PLANT_LEVEL:0000036
325 [Term]
326 id: PLANT_LEVEL:0000043
327 name: hand rank 07
328 synonym: "HDRK07" EXACT []
329 def: "Record the seventh rank hand " []
330 is_a: PLANT_LEVEL:0000036
332 [Term]
333 id: PLANT_LEVEL:0000044
334 name: hand rank 08
335 synonym: "HDRK08" EXACT []
336 def: "Record the height rank hand " []
337 is_a: PLANT_LEVEL:0000036
339 [Term]
340 id: PLANT_LEVEL:0000045
341 name: hand rank 09
342 synonym: "HDRK09" EXACT []
343 def: "Record the ninth rank hand " []
344 is_a: PLANT_LEVEL:0000005
346 [Term]
347 id: PLANT_LEVEL:0000046
348 name: hand rank 10
349 synonym: "HDRK10" EXACT []
350 def: "Record the tenth rank hand " []
351 is_a: PLANT_LEVEL:0000036
353 [Term]
354 id: PLANT_LEVEL:0000047
355 name: hand rank 11
356 synonym: "HDRK11" EXACT []
357 def: "Record the eleventh rank hand " []
358 is_a: PLANT_LEVEL:0000036
360 [Term]
361 id: PLANT_LEVEL:0000048
362 name: hand rank 12
363 synonym: "HDRK12" EXACT []
364 def: "Record the twelfth rank hand " []
365 is_a: PLANT_LEVEL:0000036
367 [Term]
368 id: PLANT_LEVEL:0000049
369 name: hand rank 13
370 synonym: "HDRK13" EXACT []
371 def: "Record the thirteenth rank hand " []
372 is_a: PLANT_LEVEL:0000036
374 [Term]
375 id: PLANT_LEVEL:0000050
376 name: hand rank 14
377 synonym: "HDRK14" EXACT []
378 def: "Record the fourteenth rank hand " []
379 is_a: PLANT_LEVEL:0000036
381 [Term]
382 id: PLANT_LEVEL:0000051
383 name: hand rank 15
384 synonym: "HDRK15" EXACT []
385 def: "Record the fifteenth rank hand " []
386 is_a: PLANT_LEVEL:0000036
388 [Term]
389 id: PLANT_LEVEL:0000052
390 name: hand rank 16
391 synonym: "HDRK16" EXACT []
392 def: "Record the sixteenth rank hand " []
393 is_a: PLANT_LEVEL:0000036
395 [Term]
396 id: PLANT_LEVEL:0000053
397 name: hand rank 17
398 synonym: "HDRK17" EXACT []
399 def: "Record the seventeenth rank hand " []
400 is_a: PLANT_LEVEL:0000036
402 [Term]
403 id: PLANT_LEVEL:0000054
404 name: hand rank 18
405 synonym: "HDRK18" EXACT []
406 def: "Record the eighteenth rank hand " []
407 is_a: PLANT_LEVEL:0000036
409 [Term]
410 id: PLANT_LEVEL:0000055
411 name: hand rank 19
412 synonym: "HDRK19" EXACT []
413 def: "Record the nineteenth rank hand " []
414 is_a: PLANT_LEVEL:0000005
416 [Term]
417 id: PLANT_LEVEL:0000056
418 name: hand rank 20
419 synonym: "HDRK01" EXACT []
420 def: "Record the twentieth rank hand " []
421 is_a: PLANT_LEVEL:0000036
423 [Term]
424 id: PLANT_LEVEL:0000057
425 name: hand rank 21
426 synonym: "HDRK21" EXACT []
427 def: "Record the twenty first rank hand " []
428 is_a: PLANT_LEVEL:0000036
430 [Term]
431 id: PLANT_LEVEL:0000058
432 name: hand rank 22
433 synonym: "HDRK22" EXACT []
434 def: "Record the twenty second rank hand " []
435 is_a: PLANT_LEVEL:0000036
437 [Term]
438 id: PLANT_LEVEL:0000059
439 name: hand rank 23
440 synonym: "HDRK23" EXACT []
441 def: "Record the twenty third rank hand " []
442 is_a: PLANT_LEVEL:0000036
444 [Term]
445 id: PLANT_LEVEL:0000060
446 name: hand rank 24
447 synonym: "HDRK24" EXACT []
448 def: "Record the twenty fourth rank hand " []
449 is_a: PLANT_LEVEL:0000036
451 [Term]
452 id: PLANT_LEVEL:0000061
453 name: hand rank 25
454 synonym: "HDRK25" EXACT []
455 def: "Record the twenty fifth rank hand " []
456 is_a: PLANT_LEVEL:0000036
458 [Term]
459 id: PLANT_LEVEL:0000062
460 name: hand rank 26
461 synonym: "HDRK26" EXACT []
462 def: "Record the twenty sixth rank hand " []
463 is_a: PLANT_LEVEL:0000036
465 [Term]
466 id: PLANT_LEVEL:0000063
467 name: hand rank 27
468 synonym: "HDRK27" EXACT []
469 def: "Record the twenty seventh rank hand " []
470 is_a: PLANT_LEVEL:0000036
472 [Term]
473 id: PLANT_LEVEL:0000064
474 name: hand rank 28
475 synonym: "HDRK28" EXACT []
476 def: "Record the twenty eighth rank hand " []
477 is_a: PLANT_LEVEL:0000036
479 [Term]
480 id: PLANT_LEVEL:0000065
481 name: hand rank 29
482 synonym: "HDRK29" EXACT []
483 def: "Record the twenty ninth rank hand " []
484 is_a: PLANT_LEVEL:0000036
486 [Term]
487 id: PLANT_LEVEL:0000066
488 name: hand rank 30
489 synonym: "HDRK30" EXACT []
490 def: "Record the thirtieth rank hand " []
491 is_a: PLANT_LEVEL:0000036
493 [Term]
494 id: PLANT_LEVEL:0000067
495 name: 1st most distal hand rank
496 synonym: "DistHDRK01" EXACT []
497 def: "Record the most distal hand rand " []
498 is_a: PLANT_LEVEL:0000036
500 [Term]
501 id: PLANT_LEVEL:0000068
502 name: 2nd distal hand rank
503 synonym: "DistHDRK02" EXACT []
504 def: "Record the second most distal hand rand " []
505 is_a: PLANT_LEVEL:0000036
507 [Term]
508 id: PLANT_LEVEL:0000069
509 name: cycle 4
510 synonym: "C4" EXACT []
511 def: "Fourth cycle (or ratoon four)." []
512 is_a: PLANT_LEVEL:0000001
514 [Term]
515 id: PLANT_LEVEL:0000070
516 name: cycle 5
517 synonym: "C5" EXACT []
518 def: "Fifth cycle (or ratoon five)." []
519 is_a: PLANT_LEVEL:0000001
521 [Term]
522 id: PLANT_LEVEL:0000071
523 name: cycle 6
524 synonym: "C6" EXACT []
525 def: "Sixth cycle (or ratoon six)." []
526 is_a: PLANT_LEVEL:0000001
528 [Term]
529 id: PLANT_LEVEL:0000072
530 name: cycle 1 main plant
531 synonym: "C1_main_plt" EXACT []
532 def: "First cycle (ratoon one-main plant)." []
533 is_a: PLANT_LEVEL:0000001
535 [Term]
536 id: PLANT_LEVEL:0000073
537 name: cycle 1 tallest sucker
538 synonym: "C1_tall_sckr" EXACT []
539 def: "First cycle (ratoon one-tallest sucker)." []
540 is_a: PLANT_LEVEL:0000001
542 [Term]
543 id: PLANT_LEVEL:0000074
544 name: cycle 2 main plant
545 synonym: "C2_main_plt" EXACT []
546 def: "Second cycle (ratoon two-main plant)." []
547 is_a: PLANT_LEVEL:0000001
549 [Term]
550 id: PLANT_LEVEL:0000075
551 name: cycle 2 tallest sucker
552 synonym: "C2_tall_sckr" EXACT []
553 def: "Second cycle (ratoon two-tallest sucker)." []
554 is_a: PLANT_LEVEL:0000001
556 [Term]
557 id: PLANT_LEVEL:0000076
558 name: cycle 3 main plant
559 synonym: "C3_main_plt" EXACT []
560 def: "Third cycle (ratoon three-main plant)." []
561 is_a: PLANT_LEVEL:0000001
563 [Term]
564 id: PLANT_LEVEL:0000077
565 name: cycle 3 tallest sucker
566 synonym: "C3_tall_sckr" EXACT []
567 def: "Third cycle (ratoon three-tallest sucker)." []
568 is_a: PLANT_LEVEL:0000001
570 [Term]
571 id: PLANT_LEVEL:0000078
572 name: cycle 4 main plant
573 synonym: "C4_main_plt" EXACT []
574 def: "Fourth cycle (ratoon four-main plant)." []
575 is_a: PLANT_LEVEL:0000001
577 [Term]
578 id: PLANT_LEVEL:0000079
579 name: cycle 4 tallest sucker
580 synonym: "C4_tall_sckr" EXACT []
581 def: "Fourth cycle (ratoon four-tallest sucker)." []
582 is_a: PLANT_LEVEL:0000001