js/source/entries/sequenced_accessions.js

   1
   2 import '../legacy/jquery.js';
   3 import '../legacy/jquery/dataTables.js';
   4 import '../legacy/CXGN/Login.js';
   5
   6 export function init(main_div, stock_id, stockprop_id) {
   7
   8     if (!(main_div instanceof HTMLElement)) {
   9         main_div = document.getElementById(
  10             main_div.startsWith("#") ? main_div.slice(1) : main_div
  11         );
  12     }
  13
  14     jQuery(document).ready(function () {
  15         var stock_param = "";
  16         if (stock_id !== undefined && stock_id !== null) {
  17             stock_param = "/" + stock_id;
  18             jQuery('#sequenced_stocks_table').DataTable({
  19                 "ajax": '/ajax/genomes/sequenced_stocks' + stock_param
  20             });
  21         }
  22         else {
  23             jQuery('#sequenced_stocks_table').DataTable({
  24                 "ajax": '/ajax/genomes/sequenced_stocks'
  25             });
  26         }
  27     });
  28
  29     jQuery('#sequencing_info_form').submit(function (event) {
  30
  31         event.preventDefault();
  32
  33         var formdata = jQuery("#sequencing_info_form").serialize();
  34         //alert(formdata);
  35         jQuery.ajax({
  36             url: '/ajax/genomes/store_sequencing_info?' + formdata,
  37             success: function (r) {
  38                 if (r.error) { alert(r.error + r); }
  39                 else {
  40                     alert("The entry has been saved. Thank you!");
  41                     jQuery('#edit_sequencing_info_dialog').modal('toggle');
  42                     clear_dialog_entries();
  43                     jQuery('#sequenced_stocks_table').DataTable().ajax.reload();
  44                 }
  45             },
  46             error: function (r, e) {
  47                 alert("An error occurred. (" + r.responseText + ")");
  48                 var err = eval("(" + r.responseText + ")");
  49             }
  50         });
  51     });
  52
  53     jQuery('#dismiss_sequencing_info_dialog').click(function () {
  54         jQuery('#edit_sequencing_info_dialog').modal('toggle');
  55         clear_dialog_entries();
  56     });
  57 }
  58
  59
  60 function clear_dialog_entries() {
  61     jQuery('#organization').val(undefined);
  62     jQuery('#website').val(undefined);
  63     jQuery('#genbank_accession').val(undefined);
  64     jQuery('#funded_by').val(undefined);
  65     jQuery('#funder_project_id').val(undefined);
  66     jQuery('#contact_email').val(undefined);
  67     jQuery('#sequencing_year').val(undefined);
  68     jQuery('#publication').val(undefined);
  69     jQuery('#jbrowse_link').val(undefined);
  70     jQuery('#blast_db_id').val(undefined);
  71     jQuery('#ftp_link').val(undefined);
  72     jQuery('#ncbi_link').val(undefined);
  73     jQuery('#stockprop_id').val(undefined);
  74     jQuery('#website').val(undefined);
  75 }
  76
  77 export function delete_sequencing_info(stockprop_id) {
  78     var answer = confirm("Are you sure you want to delete this entry? (stockprop_id= " + stockprop_id + "). This action cannot be undone.");
  79     if (answer) {
  80         jQuery.ajax({
  81             url: '/ajax/genomes/sequencing_info/delete/' + stockprop_id,
  82             success: function (r) {
  83                 if (r.error) { alert(r.error); }
  84                 else {
  85                     alert("The entry has been deleted.");
  86                     jQuery('#sequenced_stocks_table').DataTable().ajax.reload();
  87                 }
  88             },
  89             error: function (r) {
  90                 alert("An error occurred. The entry was not deleted.");
  91             }
  92         });
  93     }
  94 }
  95
  96 export function edit_sequencing_info(stockprop_id) {
  97     //alert(stockprop_id);
  98     jQuery.ajax({
  99         url: '/ajax/genomes/sequencing_info/' + stockprop_id,
 100         success: function (r) {
 101             if (r.error) { alert(r.error); }
 102             else {
 103                 //alert(JSON.stringify(r));
 104                 jQuery('#organization').val(r.data.organization);
 105                 jQuery('#website').val(r.data.website);
 106                 jQuery('#genbank_accession').val(r.data.genbank_accession);
 107                 jQuery('#funded_by').val(r.data.funded_by);
 108                 jQuery('#funder_project_id').val(r.data.funder_project_id);
 109                 jQuery('#contact_email').val(r.data.contact_email);
 110                 jQuery('#sequencing_year').val(r.data.sequencing_year);
 111                 jQuery('#publication').val(r.data.publication);
 112                 jQuery('#jbrowse_link').val(r.data.jbrowse_link);
 113                 jQuery('#blast_db_id').val(r.data.blast_db_id);
 114                 jQuery('#ftp_link').val(r.data.ftp_link);
 115                 jQuery('#ncbi_link').val(r.data.ncbi_link);
 116                 jQuery('#stockprop_id').val(r.data.stockprop_id);
 117                 jQuery('#sequencing_status_stock_id').val(r.data.stock_id);
 118                 jQuery('#website').val(r.data.website);
 119                 jQuery('#edit_sequencing_info_dialog').modal("show");
 120             }
 121         },
 122         error: function (r) { alert("an error occurred"); }
 123     });
 124
 125
 126
 127 }