mason/feature/types/default.mas

   1 <%args>
   2     $feature
   3     $featurelocs
   4     $blast_url => undef
   5     $xrefs     => []
   6 </%args>
   7
   8 <%once>
   9     use SGN::View::Feature qw/ type_name /;
  10 </%once>
  11
  12 <& /feature/page_title.mas, feature => $feature &>
  13
  14 <&| /page/info_section.mas,
  15     title       => type_name($feature,'caps').' details',
  16     subtitle    => $feature->is_obsolete ? 'WARNING: This feature is obsolete, new data is available.' : '',
  17     collapsible => 1,
  18 &>
  19    <& /feature/feature_data.mas,
  20       feature     => $feature,
  21       featurelocs => $featurelocs,
  22     &>
  23     <& /feature/properties.mas,
  24        feature => $feature,
  25     &>
  26 </&>
  27
  28 <&| /page/info_section.mas,
  29      title         => type_name($feature,'caps').' sequence',
  30      collapsible   => 1,
  31      collapsed     => 0,
  32      hide_if_empty => 1,
  33  &>
  34     <& /feature/residues.mas,
  35             feature   => $feature,
  36             blast_url => $blast_url,
  37     &>
  38 </&>
  39
  40 <&| /page/info_section.mas,
  41    title => 'Related features',
  42    collapsible => 1,
  43    hide_if_empty => 1,
  44 &>
  45
  46   <& /feature/related_features.mas,
  47       feature   => $feature,
  48       omit_columns => ['organism'],
  49   &>
  50
  51 </&>
  52
  53 <&| /page/info_section.mas,
  54      title         => 'Region sequence(s)',
  55      subtitle      => "reference sequence underlying each location of this feature",
  56      collapsible   => 1,
  57      collapsed     => 0,
  58      hide_if_empty => 1,
  59  &>
  60     <& /feature/region_sequence.mas,
  61             feature   => $feature,
  62             blast_url => $blast_url,
  63     &>
  64 </&>
  65
  66 <&| /page/info_section.mas,
  67      title => 'Related views',
  68      empty_message => 'None found',
  69      collapsible => 1,
  70      is_empty => ! scalar @$xrefs,
  71  &>
  72      <& /sitefeatures/mixed/xref_set/link.mas,
  73         xrefs => $xrefs,
  74         empty_message => '',
  75       &>
  76 </&>