From 3c775588b9b32ede448495e35131621a5a705a76 Mon Sep 17 00:00:00 2001
From: Lukas Mueller <lam87@cornell.edu>
Date: Wed, 9 Oct 2013 22:42:26 -0400
Subject: [PATCH] fix an issue with a race condition - blast run tempfiles need
 to stick around - do_not_cleanup(1) !

---
 lib/SGN/Controller/AJAX/Blast.pm | 3 +++
 1 file changed, 3 insertions(+)

diff --git a/lib/SGN/Controller/AJAX/Blast.pm b/lib/SGN/Controller/AJAX/Blast.pm
index 2c64dcb49..f2a15cd55 100644
--- a/lib/SGN/Controller/AJAX/Blast.pm
+++ b/lib/SGN/Controller/AJAX/Blast.pm
@@ -57,6 +57,7 @@ sub run : Path('/tools/blast/run') Args(0) {
     
     my $jobid = basename($seqfile);
 
+
     print STDERR "JOB ID CREATED: $jobid\n";
 
     my $seq_count;
@@ -223,6 +224,8 @@ sub run : Path('/tools/blast/run') Args(0) {
 	 
 	 print STDERR "Saving job state to $seqfile.job for id ".$job->job_id()."\n";
 
+	 $job->do_not_cleanup(1);
+
 	 nstore( $job, $seqfile.".job" )
 	     or die 'could not serialize job object';
 
-- 
2.11.4.GIT