From c02f52150e71880faf696969ca612c1f60695186 Mon Sep 17 00:00:00 2001
From: titima15 <tt15@cornell.edu>
Date: Thu, 17 Oct 2024 18:35:41 -0400
Subject: [PATCH] new name format

---
 .../add_autogenerated_name_metadata_dialog.mas     | 136 +++++++++++++++++++++
 mason/transformation/manage_transformation.mas     |   2 +-
 .../transformation/transformation_project_tree.mas |   1 +
 3 files changed, 138 insertions(+), 1 deletion(-)
 create mode 100644 mason/transformation/add_autogenerated_name_metadata_dialog.mas

diff --git a/mason/transformation/add_autogenerated_name_metadata_dialog.mas b/mason/transformation/add_autogenerated_name_metadata_dialog.mas
new file mode 100644
index 0000000000..f1d93bc098
--- /dev/null
+++ b/mason/transformation/add_autogenerated_name_metadata_dialog.mas
@@ -0,0 +1,136 @@
+<%args>
+
+$programs => undef
+$program_id => undef
+$program_name => undef
+
+</%args>
+
+<& /util/import_javascript.mas, classes => ['CXGN.TrialTreeFolders'] &>
+
+
+<div class="modal fade" id="add_autogenerated_name_metadata_dialog" name="add_autogenerated_name_metadata_dialog" tabindex="-1" role="dialog" aria-labelledby="addAutogeneratedNameMetadataDialog">
+    <div class="modal-dialog modal-xl" role="document">
+        <div class="modal-content">
+            <div class="modal-header" style="text-align: center">
+                <button type="button" class="close" data-dismiss="modal" aria-label="Close"><span aria-hidden="true">&times;</span></button>
+                <h4 class="modal-title" id="addAutogeneratedNameMetadataDialog">Add Autogenerated Name Metadata</h4>
+            </div>
+            <div class="modal-body">
+                <div class="container-fluid">
+                    <form class="form-horizontal" id="add_new_autogenerated_name_metadata_form" name="add_new_autogenerated_name_metadata_form">
+% if ($programs) {
+                        <div class="form-group">
+                            <label class="col-sm-4 control-label">Breeding Program: </label>
+                            <div class="col-sm-8">
+                                <select class="form-control" id="autogenerated_name_program" name="autogenerated_name_program">
+                                    <option value="">Select Breeding Program</option>
+<%perl>
+foreach my $program (@$programs) {
+if (@$program[3]) {
+print "<option selected=\"selected\" value='".@$program[0]."'>".@$program[1]."</option>";
+} else {
+print "<option value='".@$program[0]."'>".@$program[1]."</option>";
+}
+}
+</%perl>
+                                </select>
+                            </div>
+                        </div>
+% } elsif ($program_name) {
+                        <div class="form-group">
+                            <label class="col-sm-3 control-label">Breeding Program: </label>
+                            <div class="col-sm-9">
+                                <select class="form-control" id="autogenerated_name_program" name="autogenerated_name_program">
+                                    <option value="<%$program_id%>"><%$program_name%></option>
+                                </select>
+                            </div>
+                        </div>
+% }
+                        <div class="form-group">
+                            <label class="col-sm-4 control-label">Format Name: </label>
+                            <div class="col-sm-8">
+                                <input class="form-control" id="format_name" name="format_name" type="text" placeholder="For example: Breedbase_transformants"/>
+                            </div>
+                        </div>
+                        <div class="form-group">
+                            <label class="col-sm-4 control-label">Description: </label>
+                            <div class="col-sm-8">
+                                <input class="form-control" id="autogenerated_name_metadata_description" name="autogenerated_name_metadata_description" type="text" placeholder="Optional" />
+                            </div>
+                        </div>
+                        <div class="form-group">
+                            <label class="col-sm-4 control-label">Autogenerated Names for: </label>
+                            <div class="col-sm-8">
+                                <select class="form-control" id="name_type">
+                                    <option value="">Select a type</option>
+                                    <option value="transformant">transformant (accession)</option>
+                                </select>
+                            </div>
+                        </div>
+                        <div class="form-group">
+                            <label class="col-sm-4 control-label">How many attributes for basename: </label>
+                            <div class="col-sm-8">
+                                <select class="form-control" id="number_of_attributes">
+                                    <option value="">Select a number</option>
+                                    <option value="1">1</option>
+                                    <option value="2">2</option>
+                                    <option value="3">3</option>
+                                    <option value="4">4</option>
+                                    <option value="5">5</option>
+                                </select>
+                            </div>
+                        </div>
+                        <div id ="name_attributes_form_div">
+                        </div>
+
+
+
+                    </form>
+
+                </div>
+            </div>
+            <div class="modal-footer">
+                <button type="button" class="btn btn-default" data-dismiss="modal">Close</button>
+                <button type="button" class="btn btn-primary" id="new_autogenerated_name_metadata_submit_button">Submit</button>
+            </div>
+        </div>
+    </div>
+</div>
+
+
+
+<script>
+
+jQuery(document).ready(function(){
+
+    jQuery("[name='add_autogenerated_name_metadata_link']").click(function(e) {
+        e.preventDefault();
+        jQuery("#add_autogenerated_name_metadata_dialog").modal("show");
+    });
+
+    jQuery("#number_of_attributes").change(function() {
+        number_of_attributes = jQuery('#number_of_attributes').val();
+        if (number_of_attributes){
+            name_attributes_form();
+        }
+    })
+
+    function name_attributes_form () {
+        var number_of_attributes = jQuery('#number_of_attributes').val();
+
+        var html = '<table class="table table-bordered" id="name_attributes_table"><thead><tr><th>Attribute</th><th></th></tr></thead><tbody>';
+        for(var i=0; i<number_of_attributes; i++){
+            html = html + '<tr><td>' + i + '</td><td><div name="attribute_selects" id="attribute_select_' +i+ '"></div></td><td></td></tr>';
+        };
+        html = html + '</tbody></table>';
+
+        jQuery('#name_attributes_form_div').html(html);
+
+    };
+
+
+
+});
+
+</script>
diff --git a/mason/transformation/manage_transformation.mas b/mason/transformation/manage_transformation.mas
index 3cb3fe0a5a..ceddc580fb 100644
--- a/mason/transformation/manage_transformation.mas
+++ b/mason/transformation/manage_transformation.mas
@@ -7,7 +7,7 @@ $user_id
 
 <%perl>
     my $subtitle;
-    $subtitle = '<button class="btn btn-sm btn-primary" style="margin:3px" id="create_transformation_project_link" name="create_transformation_project_link" >Add Transformation Project</button><button class="btn btn-sm btn-primary" style="margin:3px" id="add_autogenerated_name_info_link_transformation_page" name="add_autogenerated_name_info_link" >Add Autogenerated Name Info</button><button class="btn btn-sm btn-primary" style="margin:3px" id="add_vector_construct_link">Add Vector Construct</button>';
+    $subtitle = '<button class="btn btn-sm btn-primary" style="margin:3px" id="create_transformation_project_link" name="create_transformation_project_link" >Add Transformation Project</button><button class="btn btn-sm btn-primary" style="margin:3px" id="add_autogenerated_name_info_link_transformation_page" name="add_autogenerated_name_info_link" >Add Autogenerated Name Info</button><button class="btn btn-sm btn-primary" style="margin:3px" id="add_vector_construct_link">Add Vector Construct</button><button class="btn btn-sm btn-primary" style="margin:3px" id="add_autogenerated_name_metadata_link_transformation_page" name="add_autogenerated_name_metadata_link" >Add Autogenerated Name Metadata</button>';
 </%perl>
 
 <br />
diff --git a/mason/transformation/transformation_project_tree.mas b/mason/transformation/transformation_project_tree.mas
index 7918a3811c..5ef5f301e0 100644
--- a/mason/transformation/transformation_project_tree.mas
+++ b/mason/transformation/transformation_project_tree.mas
@@ -15,6 +15,7 @@ $user_id => undef
 <& /breeders_toolbox/folder/folder_move.mas, project_type=>'transformation_project' &>
 <& /breeders_toolbox/folder/folders_edit.mas, folder_tree_type => 'Transformation', folder_tree_identifier => 'transformation_projects_list', folder_tree_refresh_name => 'refresh_transformation_project_jstree_html' &>
 <& /transformation/add_autogenerated_name_info_dialog.mas, programs=>\@programs, user_id=>$user_id &>
+<& /transformation/add_autogenerated_name_metadata_dialog.mas, programs=>\@programs, user_id=>$user_id &>
 
 <table class="table table-bordered">
     <thead>
-- 
2.11.4.GIT