test/test_lenscorrection_trakem2.js

   1 importClass( Packages.lenscorrection.DistortionCorrectionTask );
   2 importClass( Packages.ini.trakem2.display.Display );
   3 importClass( Packages.ini.trakem2.display.Patch );
   4 importPackage( Packages.mpicbg.trakem2.transform );
   5
   6 /** Remove all coordinate transforms from all patches in the layer set */
   7 var layers = Display.getFront().getSelection().getLayer().getParent().getLayers();
   8 for ( var i = 0; i < layers.size(); ++i )
   9 {
  10         var patches = layers.get( i ).getDisplayables( Patch );
  11         for ( var j = 0; j < patches.size(); ++j )
  12         {
  13                 var patch = patches.get( j );
  14                 patch.setCoordinateTransform( null );
  15                 patch.updateMipmaps();
  16         }
  17 }
  18
  19 /** Apply a distortion */
  20 //var m = new MovingLeastSquaresTransform();
  21 //m.init( "rigid 1 100 100 200 200 1150 1150 1050 1050 1150 100 950 100" );
  22 //var mi = new MovingLeastSquaresTransform();
  23 //mi.init( "rigid 1 200 200 100 100 1050 1050 1150 1150 950 100 1150 100" );
  24 //m.init( "rigid 1 100 100 120 120 1150 1150 1130 1130 1150 100 1130 100" );
  25 var m = new TranslationModel2D();
  26 m.init( "400 200" );
  27 for ( var i = 0; i < layers.size(); ++i )
  28 {
  29         var patches = layers.get( i ).getDisplayables( Patch );
  30         for ( var j = 0; j < patches.size(); ++j )
  31         {
  32                 var patch = patches.get( j );
  33                 patch.setCoordinateTransform( m );
  34                 patch.updateMipmaps();
  35         }
  36 }
  37
  38 Display.repaint();
  39
  40
  41 /** Estimate and apply distortion correction model */
  42 DistortionCorrectionTask.correctDistortionFromSelection( Display.getFront().getSelection() );
  43