repo.or.cz
/
trakem2.git
/
search
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
log
|
graphiclog1
|
graphiclog2
|
commit
|
commitdiff
|
tree
|
refs
|
edit
|
fork
first
·
prev
·
next
Merge branch 'master' of ssh://repo.or.cz/srv/git/trakem2
2010-08-16
S
t
e
phan S
a
a
lfeld
M
e
rge branch
'
m
a
s
t
e
r' of ssh:
/
/r
e
p
o
.
o
r
.
cz/sr
v
/
g
i
t/trakem
2
commit
|
commitdiff
|
tree
2010-08-07
Stephan
Saa
l
feld
finding
connected
t
iles moved
i
nto b
a
se c
l
as
s
commit
|
commitdiff
|
tree
2010-08-05
Stephan
Saalfeld
extended verbosi
t
y of the
tile m
a
tching
commit
|
commitdiff
|
tree
2010-03-19
Stephan Saalfeld
M
e
rge bra
n
ch 'master' of s
s
h://repo
.
o
r
.
cz/srv/gi
t
/trakem2
commit
|
commitdiff
|
tree
2010-03-19
S
t
e
p
han Saalfeld
Recovered the most importatn of Ignacio's pre
v
iou
s
.
.
.
commit
|
commitdiff
|
tree
2010-03-19
Stephan Saalfeld
Merg
e
bran
c
h 'mas
t
er
'
into lens-model
commit
|
commitdiff
|
tree
2010-03-19
St
e
phan Saalfel
d
Created Poly
n
omialModel2D, a w
r
app
e
r
for
V
e
r
en
a
Kaynig's
commit
|
commitdiff
|
tree
2010-03-18
Stephan Saalfe
l
d
Added the max
i
ma
l
accept
e
d fac
t
or to mean PointMatch
.
.
.
commit
|
commitdiff
|
tree
2010-03-17
S
tephan Saalfeld
Rem
o
ve matches with l
a
rge displace
m
e
n
t f
r
om th
e
c
on
f
igura
t
i
on
commit
|
commitdiff
|
tree
2010-02-23
Ste
p
han Saalfe
l
d
f
ixed calibr
a
tion of scaled sna
p
shots when ex
p
orting
.
.
.
commit
|
commitdiff
|
tree
2010-02-22
S
tep
h
a
n
Saa
l
feld
fixed cali
b
r
a
tio
n
of
scal
e
d
snaps
h
ot
s
commit
|
commitdiff
|
tree
2010-02-19
Stephan Saalf
e
ld
Al
i
gn
T
ask
:
when
deforming,
til
e
s ARE a
l
ready in place
commit
|
commitdiff
|
tree
2010-02-19
Stephan Saal
f
e
l
d
AlignTask: Fixed missuse of a
static variable
.
commit
|
commitdiff
|
tree
2010-02-19
Stephan
Saa
l
feld
Remove
the never used
s
h
a
ke method from abstr
a
ct
M
odel
.
commit
|
commitdiff
|
tree
2010-02-10
Stephan Sa
a
lfeld
Fixed a bug th
a
t m
a
de
t
he o
r
iginal
imag
e
appear behind
commit
|
commitdiff
|
tree
2010-02-09
Stephan Saalf
e
l
d
Sync
h
roni
z
e
d
sc
r
eenPatchRange
s
commit
|
commitdiff
|
tree
2010-02-09
S
tephan
S
aalfe
l
d
m
i
no
r
cl
e
anup
in lensco
r
rection
commit
|
commitdiff
|
tree
2010-02-09
Steph
a
n
Saalfeld
Added TransformMes
h
M
appingWithMasks f
o
r more effic
i
ent
.
.
.
commit
|
commitdiff
|
tree
2010-02-09
S
t
ephan S
a
alfeld
NonLinearTransfo
r
mMode c
a
n
propaga
t
e t
h
e
transformatio
n
.
.
.
commit
|
commitdiff
|
tree
2010-02-07
Step
h
an Saalfeld
For now, don'
t
s
cale max
E
psi
l
o
n
.
commit
|
commitdiff
|
tree
2010-02-07
Stephan Saalfeld
Align Multi-Layer-Mosaic: U
s
e u
p
to 2
x
m
axOct
a
veSi
z
e
.
.
.
commit
|
commitdiff
|
tree
2010-01-29
Stephan Saalfe
l
d
F
inished
t
he
d
efo
r
m operat
i
on to consi
d
er all
g
raphs
.
.
.
commit
|
commitdiff
|
tree
2010-01-29
S
te
p
h
a
n
Saalfe
l
d
Fixed Float
.
MIN_VALUE to Float
.
MAX
_
VALU
E
where it remained
.
.
.
commit
|
commitdiff
|
tree
2010-01-29
Stephan Saa
l
f
e
l
d
align
M
ultiLayerMosaic fina
l
ly uses graph-
b
ased
pre
.
.
.
commit
|
commitdiff
|
tree
2010-01-29
Stephan Sa
a
lfeld
chan
g
ed default value of S
I
FT
.
maxO
c
taveSize =
6
00
commit
|
commitdiff
|
tree
2010-01-29
Steph
a
n Saalfeld
fixed pairOv
e
rlappin
g
Til
e
s( List, Lis
t
, L
i
st[
]
)
commit
|
commitdiff
|
tree
2010-01-28
Stephan
S
a
alfe
l
d
added cor
r
espondence weight as a paramete
r
to
A
lign
.
.
.
commit
|
commitdiff
|
tree
2009-11-17
Stephan
S
aal
f
eld
Merge branch 'master
'
into bunwarpj
commit
|
commitdiff
|
tree
2009-11-05
S
t
ephan Sa
a
l
f
e
ld
Mer
g
e branch
'ma
s
ter' into bunwarpj
commit
|
commitdiff
|
tree
2009-11-04
Stephan Saalfeld
M
e
rge branch 'master'
into
b
unwarpj
commit
|
commitdiff
|
tree
2009-11-03
Stephan
Saalfeld
Fixed CompositeModes to work
in th
e
followin
g
conf
i
g
urations
commit
|
commitdiff
|
tree
2009-11-03
St
e
pha
n
Saalfeld
Rever
t
"Work aro
u
nd
anno
y
in
g
bug
i
n Graph
i
cs2D, i
n
.
.
.
commit
|
commitdiff
|
tree
2009-11-03
Stephan
S
aalfeld
Fixed Comp
o
sit
e
Modes to wor
k
in the following con
f
igurations
commit
|
commitdiff
|
tree
2009-11-03
St
e
phan Saa
l
fe
l
d
Se
p
arating Ali
g
nLayersTask
from
A
l
ignTask
.
commit
|
commitdiff
|
tree
2009-11-03
S
te
p
h
an Sa
a
lfeld
Revert "Work
a
round annoying bu
g
in Gra
p
h
i
cs2D, in
.
.
.
commit
|
commitdiff
|
tree
2009-11-03
Stephan
S
aalfeld
Mer
g
e branch 'ma
s
t
e
r' into compo
s
ite-modes
commit
|
commitdiff
|
tree
2009-11-03
Step
h
an Saalfel
d
Ad
d
ARGBComposit
e
c
a
n handle image w
i
th
n
o alpha
.
commit
|
commitdiff
|
tree
2009-11-03
S
t
e
p
han Saalfeld
Adde
d
a c
o
mment in Align
commit
|
commitdiff
|
tree
2009-10-14
S
tephan Saalfeld
refactored a misnamed
m
e
t
hod and
s
tatified some parame
t
ers in
commit
|
commitdiff
|
tree
2009-10-14
Ste
p
h
a
n S
a
al
f
eld
synchronized p
o
tentially co
n
currenc
y
unsafe match inse
r
t
ion
.
.
.
commit
|
commitdiff
|
tree
2009-10-13
Stephan Saa
l
feld
Fixed the
g
e
o
m
etr
y
issues and added sup
p
ort for all
.
.
.
commit
|
commitdiff
|
tree
2009-10-09
Ste
p
han Saalfeld
Catchin
g
an
d
handlin
g
OutOfMemoryErrors
i
n
F
e
ature
E
x
t
ra
c
tion
.
.
.
commit
|
commitdiff
|
tree
2009-10-08
Stepha
n
Saalfeld
C
o
smet
i
cs in AlignTask and SimilarityModel2D
commit
|
commitdiff
|
tree
2009-10-08
Stephan Saa
l
fe
l
d
lenscorrection stops now later but latest a
f
ter the
.
.
.
commit
|
commitdiff
|
tree
2009-10-08
Stephan Sa
a
lfeld
Merge branch 'ma
s
t
e
r' o
f
ssh://repo
.
or
.
cz/srv/git/trakem2
commit
|
commitdiff
|
tree
2009-10-07
Stephan Saalfeld
Merge
b
r
an
c
h
'
m
aster' of ss
h
:
//
r
epo
.
o
r
.
cz/srv/git/trakem2
commit
|
commitdiff
|
tree
2009-10-07
Stephan S
a
alfeld
Fix 0
.
5gre
y
b
a
ckgroun
d
for ByteProcessors
i
n
commit
|
commitdiff
|
tree
2009-09-24
Stephan Saalfeld
M
e
r
ge br
a
nch
'm
a
ste
r
' of
s
sh://re
p
o
.
or
.
cz/srv/
g
it/tra
k
em
2
commit
|
commitdiff
|
tree
2009-09-23
Stephan Saalfeld
Saving a lot of
R
AM in visuali
z
ing the
l
e
ns dis
t
o
r
tio
n
.
.
.
commit
|
commitdiff
|
tree
2009-09-17
Stephan Saalfeld
Merg
e
branch '
s
tac
k
'
i
n
t
o
align
commit
|
commitdiff
|
tree
2009-09-17
Stephan Saalfel
d
Hope
f
ully fixed the scalin
g
i
n
Stack
commit
|
commitdiff
|
tree
2009-09-17
Stephan Saa
l
feld
M
e
rge
branch '
s
tack' into align
commit
|
commitdiff
|
tree
2009-09-17
Stephan Saalfeld
Merge
b
ranch 's
t
ack' of ss
h
://repo
.
o
r
.
cz/srv/git/tra
k
em2
.
.
.
commit
|
commitdiff
|
tree
2009-09-17
Stepha
n
Saalfel
d
Merge br
a
nch '
s
tac
k
' int
o
align
commit
|
commitdiff
|
tree
2009-09-17
Stepha
n
Saalfeld
s
e
parated the
a
ctual alignLayer
s
Linearly job
f
rom
t
he
.
.
.
commit
|
commitdiff
|
tree
2009-09-17
S
te
p
h
an
S
aalfeld
Loader
uses db_lock
commit
|
commitdiff
|
tree
2009-09-16
S
tephan Saalfeld
Merge
b
ranch 'ali
g
n'
o
f
ssh:
/
/re
p
o
.
or
.
c
z/srv/git/trakem2
.
.
.
commit
|
commitdiff
|
tree
2009-09-16
Step
h
a
n
S
a
a
lfe
l
d
Fixed a bug that prevent
e
d th
e
multi
-
l
ayer mo
s
aic
k
ing
.
.
.
commit
|
commitdiff
|
tree
2009-09-14
S
t
ephan
S
aalfel
d
Merge branch 'stack' of
ssh:/
/
repo
.
or
.
cz/srv/
g
it/trakem2
.
.
.
commit
|
commitdiff
|
tree
2009-09-14
Stephan
S
aalfel
d
a ve
r
y intermediate com
m
i
t that int
e
rru
p
t
s
me at starting the
commit
|
commitdiff
|
tree
2009-09-11
Ste
p
han Saal
f
e
l
d
decaching was not
s
uccessf
u
l---
t
rui
n
g ano
t
her one
.
.
.
commit
|
commitdiff
|
tree
2009-09-11
Stephan Sa
a
lfe
l
d
Decache
p
roces
s
ed patches aft
e
r applicati
o
n
o
f the CT
.
commit
|
commitdiff
|
tree
2009-09-10
Stephan Saalfeld
Me
r
ge branch 'al
i
gn' of ssh://repo
.
or
.
cz/srv/git/trakem2
.
.
.
commit
|
commitdiff
|
tree
2009-09-10
Steph
a
n
Saalfeld
Added a
d
eform
option to the multi-layer-mosaic me
t
hod
.
commit
|
commitdiff
|
tree
2009-09-10
S
tephan Saalfeld
Added a deform
optio
n
to
t
h
e multi-layer-mosaic method
.
commit
|
commitdiff
|
tree
2009-09-10
Stephan Saalfeld
Added a convenience method to
e
xport a fl
a
t
image for
.
.
.
commit
|
commitdiff
|
tree
2009-09-10
Stepha
n
Sa
a
lfeld
Cosmetics (rem
o
ved some non-required
imports and em
p
ty
.
.
.
commit
|
commitdiff
|
tree
2009-09-10
Stephan Saalfeld
A a static method t
o
get
t
h
e bounding box of a c
o
llection of
commit
|
commitdiff
|
tree
2009-09-02
S
t
e
p
han Saalfeld
* F
i
xed wrong blur
r
ing
commit
|
commitdiff
|
tree
2009-09-01
Steph
a
n S
a
alfeld
ictScale w
a
s inverse---an
y
w
a
y-
-
-t
h
ere are remaining
.
.
.
commit
|
commitdiff
|
tree
2009-09-01
S
t
ep
h
an Saalfeld
Pseudo-fix f
o
r locki
n
g is
s
ues
commit
|
commitdiff
|
tree
2009-09-01
Stepha
n
Saalfeld
C
re
a
ted the following ARGB
composit
e
m
odes for
two
.
.
.
commit
|
commitdiff
|
tree
2009-09-01
Stephan Saalfeld
R
e
moved
t
he
broken Ad
d
RGBComposit
e
and added a functional
commit
|
commitdiff
|
tree
2009-08-31
Stephan
S
aalfel
d
first attempt to create an adding Composite
C
o
n
text
commit
|
commitdiff
|
tree
2009-08-31
S
t
ephan Saalfeld
added tab for stac
k
z-displayable
commit
|
commitdiff
|
tree
2009-08-31
Stephan Saalf
e
ld
St
a
ck assu
r
e
s the c
o
rrect s
m
o
othing for t
h
e scal
e
introduce
d
.
.
.
commit
|
commitdiff
|
tree
2009-08-31
Stepha
n
Saalfe
l
d
AffineTransf
o
r
m
Mode notifies
al
l
af
f
e
c
t
ed Displa
y
ables
.
.
.
commit
|
commitdiff
|
tree
2009-08-31
Stephan Saalf
e
ld
* Fixed bounding box estimation
commit
|
commitdiff
|
tree
2009-08-30
S
tephan Saalfe
l
d
* removed
n
on-required meth
o
ds from patch
commit
|
commitdiff
|
tree
2009-08-30
S
teph
a
n S
a
alfeld
co
n
sistentl
y
implemented invertible c
o
ordinatetransforms
.
.
.
commit
|
commitdiff
|
tree
2009-08-30
Stephan S
a
alfeld
Added
I
nvertibleCoordinateT
r
ansformLi
s
t
commit
|
commitdiff
|
tree
2009-08-30
Step
h
an
S
a
a
l
fel
d
InvertibleCoordi
n
ateTransform im
p
lements Coordinate
T
ra
n
s
form
.
.
.
commit
|
commitdiff
|
tree
2009-08-30
Stephan
S
a
a
lfeld
proper type
C
o
ord
i
nateTransformList
.
clone()
commit
|
commitdiff
|
tree
2009-08-06
Stephan Saalfeld
F
ix Bug 71
commit
|
commitdiff
|
tree
2009-07-06
Stephan Saalfeld
Merge bra
n
c
h
'
master'
of ssh
:
//saalfe
l
d@repo
.
or
.
cz
.
.
.
commit
|
commitdiff
|
tree
2009-07-06
St
e
p
h
an
S
aalfeld
Me
r
ge branc
h
'ma
s
ter'
into
i
t
eratin
g
-lenscorrection
commit
|
commitdiff
|
tree
2009-07-06
Stephan Saalfeld
Fixed the i
t
erat
i
on in lens-cor
r
ect
i
on such tha
t
the
.
.
.
commit
|
commitdiff
|
tree
2009-07-06
St
e
phan
S
a
a
lfeld
Implemeted iterating
lens-correction as descr
i
bed i
n
.
.
.
commit
|
commitdiff
|
tree
2009-07-06
Stephan Saalfeld
Tran
s
formM
e
shMapping s
e
ts Interpol
a
tionMethod (tracking
.
.
.
commit
|
commitdiff
|
tree
2009-06-29
Stephan Sa
a
lf
e
ld
Mer
g
e b
r
anch 'paintab
l
es
'
commit
|
commitdiff
|
tree
2009-06-29
S
t
ephan Saalfeld
Di
s
tortionCorrectionTask fina
l
ly
d
oes the all to
a
ll
commit
|
commitdiff
|
tree
2009-06-29
S
tephan S
a
alf
e
ld
Abstra
c
tAffineTile2D can iden
t
ify the common PointMatches
.
.
.
commit
|
commitdiff
|
tree
2009-06-29
Ste
p
ha
n
Sa
a
lfeld
Fixe
d
tr
a
nsform
m
eshmapp
i
ng
.
js t
e
s
t
to con
f
orm with
.
.
.
commit
|
commitdiff
|
tree
2009-06-26
Stephan Saalfeld
A
no
t
s
o im
p
o
r
tant
imp
r
ove
m
en
t
of h
o
w point
c
orresponde
n
ces
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
Steph
a
n Saalfeld
Fix
e
d ac
c
identially
inverte
d
affine concatenation
.
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
Stephan Saalfeld
M
e
r
g
e bran
c
h 'paintables'
o
f
ssh://saalfeld@repo
.
or
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
Stephan Saalfe
l
d
Apply in NonLinearTransformMode wo
r
ks
.
It
was tested
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
Stephan Saalfel
d
Fixed XML parsing of C
o
or
d
i
nateTransformLists
.
They
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
S
tephan Sa
a
l
f
e
ld
Added Tra
k
EM2
extension of AffineModel2D
commit
|
commitdiff
|
tree
2009-06-25
St
e
phan Saalfeld
Fixed several bugs in and ext
e
nded MovingLeastS
q
u
aresTransf
o
r
m
:
commit
|
commitdiff
|
tree
next