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ElasticMontage: do not visualize (can be harmful when doing a series)
2009-09-14
Ste
p
han Saalfeld
Merge
b
ranch 'stack' of ssh://re
p
o
.
o
r
.
cz/srv/
g
it/trakem2
.
.
.
commit
|
commitdiff
|
tree
2009-09-14
Step
h
an Saa
l
f
eld
a very inte
r
mediate commit that int
e
rrupts me a
t
starting the
commit
|
commitdiff
|
tree
2009-09-11
S
t
ephan Saa
l
feld
de
c
a
c
hing was not succe
s
s
f
u
l
---truing another
o
ne
.
.
.
commit
|
commitdiff
|
tree
2009-09-11
Stephan Saalfeld
Decache
p
ro
c
essed
patches after application of the
CT
.
commit
|
commitdiff
|
tree
2009-09-10
Steph
a
n
Saal
f
eld
Merge branc
h
'al
i
gn'
o
f
s
sh:/
/
repo
.
or
.
c
z/sr
v
/git/trak
e
m2
.
.
.
commit
|
commitdiff
|
tree
2009-09-10
Stephan Sa
a
lfeld
A
dded a defo
r
m
option to the mult
i
-layer-mosaic metho
d
.
commit
|
commitdiff
|
tree
2009-09-10
Stephan Saalf
e
l
d
A
dded a deform o
p
tio
n
t
o the multi-layer-mo
s
aic method
.
commit
|
commitdiff
|
tree
2009-09-10
Ste
p
han Sa
a
lfel
d
A
d
ded
a convenie
n
ce
method
to expo
r
t
a flat i
m
age for
.
.
.
commit
|
commitdiff
|
tree
2009-09-10
Stephan Saal
f
eld
Cosmetics (removed some non-r
e
q
u
ired imports and empty
.
.
.
commit
|
commitdiff
|
tree
2009-09-10
Stephan Saal
f
eld
A a stat
i
c
meth
o
d to
g
et the b
o
un
d
ing box
o
f a collection of
commit
|
commitdiff
|
tree
2009-09-02
Stephan Saalfeld
* Fixed wrong blurri
n
g
commit
|
commitdiff
|
tree
2009-09-01
Ste
p
han
Saalfeld
ictScale w
a
s inverse
-
--anyway---there are remain
i
n
g
.
.
.
commit
|
commitdiff
|
tree
2009-09-01
Stephan
S
aalfeld
Pseudo-f
i
x for lock
i
ng
issues
commit
|
commitdiff
|
tree
2009-09-01
Stepha
n
S
aal
f
eld
Created the following ARGB composit
e
modes
f
or two
.
.
.
commit
|
commitdiff
|
tree
2009-09-01
Stephan
S
a
alfeld
Re
m
o
v
e
d the broken A
d
dRGBC
o
mposi
t
e and adde
d
a
f
unctional
commit
|
commitdiff
|
tree
2009-08-31
Stephan Saalfeld
first att
e
mp
t
to cr
e
ate an a
d
d
i
ng
Composit
e
Conte
x
t
commit
|
commitdiff
|
tree
2009-08-31
Stephan
Saalfe
l
d
ad
d
ed tab for
stac
k
z-disp
l
a
y
able
commit
|
commitdiff
|
tree
2009-08-31
Stephan Saalfeld
Stack as
s
ur
e
s the correct sm
o
ot
h
ing for the scale introduce
d
.
.
.
commit
|
commitdiff
|
tree
2009-08-31
S
t
ephan Saalf
e
ld
AffineTransformMode
n
otifies all affected
D
isplaya
b
les
.
.
.
commit
|
commitdiff
|
tree
2009-08-31
Stephan
S
a
a
lfeld
* Fix
e
d bou
n
ding box estimation
commit
|
commitdiff
|
tree
2009-08-30
Stephan Saalfeld
*
r
emoved n
o
n-requir
e
d methods
from patch
commit
|
commitdiff
|
tree
2009-08-30
Stephan Saalf
e
ld
consistently impl
e
me
n
ted inv
e
rtible coor
d
inatetransforms
.
.
.
commit
|
commitdiff
|
tree
2009-08-30
S
t
ephan Saa
l
feld
Added InvertibleCoordina
t
eTransfo
r
mList
commit
|
commitdiff
|
tree
2009-08-30
Steph
a
n Saa
l
feld
Inverti
b
leCoordi
n
ateTransform implem
e
n
ts CoordinateTran
s
form
.
.
.
commit
|
commitdiff
|
tree
2009-08-30
Step
h
an Saalf
e
ld
proper t
y
pe CoordinateTr
a
n
s
for
m
Lis
t
.
c
lone
(
)
commit
|
commitdiff
|
tree
2009-08-06
Stephan
S
aalfeld
Fix Bug
7
1
commit
|
commitdiff
|
tree
2009-07-06
Stephan Saalfeld
Mer
g
e bra
n
ch '
m
aster
'
of ssh://
s
aalfeld@repo
.
or
.
cz
.
.
.
commit
|
commitdiff
|
tree
2009-07-06
Stephan Saalfeld
M
e
rge branch 'master' into itera
t
ing-lenscorrec
t
ion
commit
|
commitdiff
|
tree
2009-07-06
Steph
a
n
S
a
alfeld
Fixed the iteration in lens-correction such that t
h
e
.
.
.
commit
|
commitdiff
|
tree
2009-07-06
Stephan Saalfeld
Im
p
lemeted iteratin
g
lens-correction
a
s described i
n
.
.
.
commit
|
commitdiff
|
tree
2009-07-06
Stephan Saalfeld
T
r
a
n
sformMesh
M
appi
n
g sets
I
nterpolationMethod (tr
a
cking
.
.
.
commit
|
commitdiff
|
tree
2009-06-29
Stephan Sa
a
lfeld
Merge branch 'pai
n
tables'
commit
|
commitdiff
|
tree
2009-06-29
Ste
p
han Saal
f
eld
Distortio
n
CorrectionTask fin
a
ll
y
does the a
l
l to
a
l
l
commit
|
commitdiff
|
tree
2009-06-29
Stephan Saalfeld
AbstractAffi
n
e
Tile2D can ident
i
fy
t
h
e
c
om
m
o
n
Point
M
at
c
hes
.
.
.
commit
|
commitdiff
|
tree
2009-06-29
Stephan Saalfe
l
d
F
ixed
t
r
a
n
sfor
m
m
e
shmappi
n
g
.
js test to conform
w
i
t
h
.
.
.
commit
|
commitdiff
|
tree
2009-06-26
St
e
p
h
an Saalfeld
A not s
o
impo
r
tant im
p
rovement of how point correspondenc
e
s
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
Stephan S
a
alfe
l
d
Fixed accidentially
i
nverted af
f
ine concatena
t
ion
.
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
Steph
a
n Saalfeld
Mer
g
e branch 'p
a
intables' of ssh://saalfeld@rep
o
.
or
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
Ste
p
han
S
aalfeld
Ap
p
ly
i
n
N
onL
i
nearT
r
ans
f
ormMode works
.
I
t was tested
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
S
t
e
phan Saalfeld
F
ix
e
d X
M
L parsing of Coor
d
inateTr
a
nsformL
i
st
s
.
They
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
Stephan Saal
f
eld
Added T
r
akEM2 ext
e
nsio
n
of Affine
M
odel
2
D
commit
|
commitdiff
|
tree
2009-06-25
Stephan Saal
f
e
ld
Fixe
d
several bug
s
i
n
an
d
extended
M
ov
i
n
g
L
e
astSquar
e
sT
r
a
n
sform:
commit
|
commitdiff
|
tree
2009-06-25
S
tephan Saalfeld
Pat
c
h calcu
l
ates the m
e
mory
t
o
f
r
ee f
o
r renderin
g
a
.
.
.
commit
|
commitdiff
|
tree
2009-06-25
Stephan Sa
a
lfeld
Coordinate
T
ra
n
sfo
r
mL
i
st ha
s
a
generic
parameter th
a
t
.
.
.
commit
|
commitdiff
|
tree
2009-06-22
Step
h
an Saalfeld
Merge branch 'paintable
s
' of
s
sh:
/
/saalfeld@repo
.
or
.
.
.
commit
|
commitdiff
|
tree
2009-06-20
St
e
phan Saalfeld
A
lign will not accept models
with less
than
7 inliers
.
.
.
commit
|
commitdiff
|
tree
2009-06-19
Stepha
n
Saalfeld
Align will
not accep
t
mode
l
s wit
h
less
than 7 inliers
.
.
.
commit
|
commitdiff
|
tree
2009-06-19
S
t
epha
n
Saalfeld
Workar
o
un
d
for a
b
ug which
was probab
l
y
i
nt
r
oduc
e
d
.
.
.
commit
|
commitdiff
|
tree
2009-06-17
Stephan Sa
a
l
f
eld
Merge
b
r
anch 'p
a
i
ntables' of ssh://
s
aalfe
l
d
@repo
.
or
.
.
.
commit
|
commitdiff
|
tree
2009-06-17
Stephan Saalfel
d
Kee
p
Points in
world space and corre
c
t for affine invariance
.
.
.
commit
|
commitdiff
|
tree
2009-06-16
Stephan Saalfel
d
Keep Points in worl
d
sp
a
ce
and correct for aff
i
ne invari
a
nc
e
.
.
.
commit
|
commitdiff
|
tree
2009-06-13
S
tep
h
an
Saalfeld
Added several
T
O
D
Os
.
commit
|
commitdiff
|
tree
2009-06-12
Stepha
n
S
aalfeld
Merge branch
'
paintables
'
o
f
ssh://saalfeld@repo
.
or
.
.
.
commit
|
commitdiff
|
tree
2009-06-12
Stepha
n
Sa
a
lfeld
N
onLinearTransfo
r
mMode can apply, but still
i
t
l
ooks
.
.
.
commit
|
commitdiff
|
tree
2009-06-12
St
e
pha
n
Saalf
e
ld
N
o
n
LinearTr
a
n
sformMod
e
in progress
.
P
a
t
ches paint
.
.
.
commit
|
commitdiff
|
tree
2009-06-12
Steph
a
n
Saalf
e
ld
Merge branch
'
p
a
intables' of
ssh://saalfeld@re
p
o
.
or
.
.
.
commit
|
commitdiff
|
tree
2009-06-12
Stephan Saalfeld
Temporary
com
m
it on NonLinearTransformMode
.
.
.
m
ore
.
.
.
commit
|
commitdiff
|
tree
2009-06-11
Step
h
an Saalfeld
Merge branch 'painta
b
l
e
s' of ss
h
://saalfeld@repo
.
or
.
.
.
commit
|
commitdiff
|
tree
2009-06-11
Stephan S
a
alfeld
Me
r
ge branch 'paintable
s
' of ssh://saalfel
d
@repo
.
o
r
.
.
.
commit
|
commitdiff
|
tree
2009-06-10
Stephan Saalfeld
Mer
g
e branch 'paintables' o
f
ssh://saalfe
l
d@re
p
o
.
or
.
.
.
commit
|
commitdiff
|
tree
2009-06-08
Stepha
n
Saalfel
d
Fixed
generics
.
commit
|
commitdiff
|
tree
2009-04-23
Stephan Sa
a
l
f
eld
Merge
b
r
anch 'master' of ssh://saa
l
fe
l
d@repo
.
o
r
.
cz
.
.
.
commit
|
commitdiff
|
tree
2009-04-23
Ste
p
han Saalfeld
Removed SIFT_Test
.
java
commit
|
commitdiff
|
tree
2009-04-23
S
tephan
S
aalfeld
Added co
m
ment to TransformMeshMapping
commit
|
commitdiff
|
tree
2009-04-23
S
t
e
phan
S
aalfeld
Added
s
o
m
e missin
g
final statements in Transfo
r
mMesh
commit
|
commitdiff
|
tree
2009-04-23
Stephan Saa
l
fe
l
d
Use s
t
atic field
s
for dialog initializati
o
n
in
AlignTask
.
commit
|
commitdiff
|
tree
2009-04-06
Ste
p
han Saalfeld
Fi
x
ed bl
e
nd-alp
h
a
.
commit
|
commitdiff
|
tree
2009-04-03
Stephan S
a
alfe
l
d
Put align m
u
lt
i
-layer
m
osaic in TrakEM2 sh
a
p
e
a
nd inserted
.
.
.
commit
|
commitdiff
|
tree
2009-04-03
Ste
p
han
S
a
alfeld
Extended TransformMeshMappi
n
g to cr
e
a
t
e inversely tra
n
sfo
r
me
.
.
.
commit
|
commitdiff
|
tree
2009-04-02
Stephan Saalfeld
Merge
bra
n
ch 'ic
t
' of ss
h
://saalfe
l
d@rep
o
.
or
.
cz/srv
.
.
.
commit
|
commitdiff
|
tree
2009-04-02
S
t
epha
n
Saalfeld
Multi-
l
ayer mos
a
icking with SI
F
T
us
i
ng th
e
pro
p
er
new
.
.
.
commit
|
commitdiff
|
tree
2009-03-30
St
e
phan
Saa
l
feld
Ad
d
ed Exception Handl
i
ng for th
e
(not yet pushed) chang
e
s
in
commit
|
commitdiff
|
tree
2009-03-30
Stephan Sa
a
lf
e
ld
A
R
GB-images will be lo
a
d
ed
a
s
A
RGB_PRE whi
c
h speed
s
.
.
.
commit
|
commitdiff
|
tree
2009-03-05
Steph
a
n
Saalfeld
Fixed the
t
wo-sided e
x
po
r
t
of ser
i
alized
P
ointMatche
s
commit
|
commitdiff
|
tree
2009-03-05
S
t
ephan Sa
a
lfeld
M
erge b
r
anch 'u
n
u
i
d-mipmaps' of ssh:
/
/saalfeld
@
repo
.
.
.
commit
|
commitdiff
|
tree
2009-03-05
Stephan Saalfeld
A
d
ded clone(
)
method to C
o
or
d
inateTransfo
r
m and
a
l
l
.
.
.
commit
|
commitdiff
|
tree
2009-03-05
Stephan S
a
alfel
d
A
dded
bug report to TODO
commit
|
commitdiff
|
tree
2009-02-24
Stephan Sa
a
l
feld
Re-added
51
e
1
7
a
9
6c1
c
b33f2eee7da
6
7743d25522fff232c
commit
|
commitdiff
|
tree
2009-02-23
St
e
phan Saalfeld
Merge branch 'ict' of ssh://s
a
al
f
eld@repo
.
or
.
cz
/
srv
.
.
.
commit
|
commitdiff
|
tree
2009-02-13
Steph
a
n Saalfeld
Merge
b
ranch 'ict' of ss
h
://saalfeld@repo
.
or
.
cz/srv
.
.
.
commit
|
commitdiff
|
tree
2009-02-12
Stephan Saal
f
eld
Merge
br
a
nch 'ict' of ss
h
://sa
a
lfe
l
d@repo
.
o
r
.
cz
/
srv
.
.
.
commit
|
commitdiff
|
tree
2009-02-12
Stephan Saal
f
eld
M
e
r
ge br
a
n
c
h 'ict' of ssh:
/
/saalfeld@repo
.
or
.
cz/srv
.
.
.
commit
|
commitdiff
|
tree
2009-02-12
Stephan Saalf
e
ld
Added method get
C
o
ordinateTransformBoundi
n
gBox to Patc
h
commit
|
commitdiff
|
tree
2009-02-06
Steph
a
n Saalfeld
F
ixed the Coordina
t
eTransformList XM
L
export
.
commit
|
commitdiff
|
tree
2009-02-06
St
e
p
h
a
n
S
aalfeld
Ad
d
ed the metho
d
a
ppe
n
dCoord
i
nateTran
s
form
to Patc
h
.
.
.
commit
|
commitdiff
|
tree
2009-02-03
Stephan
S
aalfeld
Updated TODO
commit
|
commitdiff
|
tree
2009-02-03
Stephan
S
aa
l
feld
Comment makeup
commit
|
commitdiff
|
tree
2009-02-02
S
t
epha
n
Saalfel
d
Merg
e
branc
h
'ict'
i
nto ict2
commit
|
commitdiff
|
tree
2009-02-02
Steph
a
n Saalfeld
Made bo
o
lean parameters
static
.
commit
|
commitdiff
|
tree
2009-02-02
Stephan Saalfeld
Added ex
p
lana
t
ion
o
f
w
h
at the
m
ethod does
.
commit
|
commitdiff
|
tree
2009-02-02
Step
h
an Saal
f
eld
Ad
d
ed
m
akeVi
r
tualCon
n
e
ctions method for
A
b
stract
A
ffi
n
eTile
2
D
.
commit
|
commitdiff
|
tree
2009-02-02
S
te
p
han Saalfeld
Static Param objec
t
s are public
.
commit
|
commitdiff
|
tree
2009-01-28
St
e
ph
a
n Saalfeld
Rep
l
aced DB
O
bject
.
getId() in cac
h
e-f
i
le
names
by
D
BOb
j
ect
.
.
.
commit
|
commitdiff
|
tree
2009-01-28
S
t
ephan Sa
a
lfeld
Deletes the af
f
ected cached Point
M
atches o
n
mi
p
map
.
.
.
commit
|
commitdiff
|
tree
2009-01-28
Stephan Saalfeld
Added String getUniqueIdentifier
(
) to DBObject
.
The
.
.
.
commit
|
commitdiff
|
tree
2009-01-21
Step
h
an Saalfeld
Merg
e
branch
'ict' of ssh
:
//saal
f
eld@
r
epo
.
or
.
c
z
/srv
.
.
.
commit
|
commitdiff
|
tree
2009-01-21
Stephan Saalfeld
Added a TODO
commit
|
commitdiff
|
tree
2009-01-21
Stephan
S
aalf
e
ld
Ali
g
n and AlignTask cac
h
e
ex
t
racte
d
PointMat
c
h
es in
.
.
.
commit
|
commitdiff
|
tree
2009-01-17
S
tepha
n
Saa
l
feld
Merge bra
n
ch
'
ict' of
ssh://saalfeld
@
repo
.
or
.
cz/
s
rv
.
.
.
commit
|
commitdiff
|
tree
2009-01-17
St
e
p
h
a
n
Saalfeld
Adde
d
checking
for
i
nterruption in the montage-method
.
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