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modified: Makefile
[GalaxyCodeBases.git] / perl / etc / coveragestackplot / soap.lst
blob6b508b060811c0bf2480a0ba2569da58c5c15a06
1 S101_Index      ./soap/sperm/Sample_S101/S101_Index.R1_sequence.soap
2 S102_Index      ./soap/sperm/Sample_S102/S102_Index.R1_sequence.soap
3 S59_Index       ./soap/sperm/Sample_S59/S59_Index.R1_sequence.soap
4 S63_Index       ./soap/sperm/Sample_S63/S63_Index.R1_sequence.soap
5 S67_Index       ./soap/sperm/Sample_S67/S67_Index.R1_sequence.soap
6 Sample_11       ./soap/sperm/Sample_S52/Sample_S52/Sample_11.PEsoap
7 Sample_11       ./soap/sperm/Sample_S52/Sample_S52/Sample_11.SEsoap
8 Sample_12       ./soap/sperm/Sample_S53/Sample_S53/Sample_12.PEsoap
9 Sample_12       ./soap/sperm/Sample_S53/Sample_S53/Sample_12.SEsoap
10 Sample_13       ./soap/sperm/Sample_S54/Sample_S54/Sample_13.PEsoap
11 Sample_13       ./soap/sperm/Sample_S54/Sample_S54/Sample_13.SEsoap
12 Sample_14       ./soap/sperm/Sample_S55/Sample_S55/Sample_14.PEsoap
13 Sample_14       ./soap/sperm/Sample_S55/Sample_S55/Sample_14.SEsoap
14 Sample_15       ./soap/sperm/Sample_S57/Sample_S57/Sample_15.PEsoap
15 Sample_15       ./soap/sperm/Sample_S57/Sample_S57/Sample_15.SEsoap
16 Sample_16       ./soap/sperm/Sample_S58/Sample_S58/Sample_16.PEsoap
17 Sample_16       ./soap/sperm/Sample_S58/Sample_S58/Sample_16.SEsoap
18 Sample_1        ./soap/sperm/Sample_S31/Sample_S31/Sample_1.PEsoap
19 Sample_1        ./soap/sperm/Sample_S31/Sample_S31/Sample_1.SEsoap
20 Sample_24       ./soap/sperm/Sample_24/Sample_24.R1_sequence.soap
21 Sample_25       ./soap/sperm/Sample_25/Sample_25.R1_sequence.soap
22 Sample_25       ./soap/sperm/Sample_S71/Sample_S71/Sample_25.PEsoap
23 Sample_25       ./soap/sperm/Sample_S71/Sample_S71/Sample_25.SEsoap
24 Sample_26       ./soap/sperm/Sample_26/Sample_26.R1_sequence.soap
25 Sample_26       ./soap/sperm/Sample_S72/Sample_S72/Sample_26.PEsoap
26 Sample_26       ./soap/sperm/Sample_S72/Sample_S72/Sample_26.SEsoap
27 Sample_27       ./soap/sperm/Sample_27/Sample_27.R1_sequence.soap
28 Sample_27       ./soap/sperm/Sample_S73/Sample_S73/Sample_27.PEsoap
29 Sample_27       ./soap/sperm/Sample_S73/Sample_S73/Sample_27.SEsoap
30 Sample_28       ./soap/sperm/Sample_28/Sample_28.R1_sequence.soap
31 Sample_28       ./soap/sperm/Sample_S74/Sample_S74/Sample_28.PEsoap
32 Sample_28       ./soap/sperm/Sample_S74/Sample_S74/Sample_28.SEsoap
33 Sample_29       ./soap/sperm/Sample_29/Sample_29.R1_sequence.soap
34 Sample_29       ./soap/sperm/Sample_S75/Sample_S75/Sample_29.PEsoap
35 Sample_29       ./soap/sperm/Sample_S75/Sample_S75/Sample_29.SEsoap
36 Sample_30       ./soap/sperm/Sample_S76/Sample_S76/Sample_30.PEsoap
37 Sample_30       ./soap/sperm/Sample_S76/Sample_S76/Sample_30.SEsoap
38 Sample_33       ./soap/sperm/Sample_S79.115/Sample_33.R1_sequence.soap
39 Sample_35       ./soap/sperm/Sample_S82.115/Sample_35.R1_sequence.soap
40 Sample_37       ./soap/sperm/Sample_S85.115/Sample_37.R1_sequence.soap
41 Sample_38       ./soap/sperm/Sample_S86.115/Sample_38.R1_sequence.soap
42 Sample_3        ./soap/sperm/Sample_S35/Sample_S35/Sample_3.PEsoap
43 Sample_3        ./soap/sperm/Sample_S35/Sample_S35/Sample_3.SEsoap
44 Sample_41       ./soap/sperm/Sample_S91.115/Sample_41.R1_sequence.soap
45 Sample_42       ./soap/sperm/Sample_S92.115/Sample_42.R1_sequence.soap
46 Sample_44       ./soap/sperm/Sample_S95.115/Sample_44.R1_sequence.soap
47 Sample_47       ./soap/sperm/Sample_S98.115/Sample_47.R1_sequence.soap
48 Sample_4        ./soap/sperm/Sample_S41/Sample_S41/Sample_4.PEsoap
49 Sample_4        ./soap/sperm/Sample_S41/Sample_S41/Sample_4.SEsoap
50 Sample_5        ./soap/sperm/Sample_S42/Sample_S42/Sample_5.PEsoap
51 Sample_5        ./soap/sperm/Sample_S42/Sample_S42/Sample_5.SEsoap
52 Sample_6        ./soap/sperm/Sample_S43/Sample_S43/Sample_6.PEsoap
53 Sample_6        ./soap/sperm/Sample_S43/Sample_S43/Sample_6.SEsoap
54 Sample_7        ./soap/sperm/Sample_S44/Sample_S44/Sample_7.PEsoap
55 Sample_7        ./soap/sperm/Sample_S44/Sample_S44/Sample_7.SEsoap
56 Sample_8        ./soap/sperm/Sample_S46/Sample_S46/Sample_8.PEsoap
57 Sample_8        ./soap/sperm/Sample_S46/Sample_S46/Sample_8.SEsoap
58 Sample_9        ./soap/sperm/Sample_S48/Sample_S48/Sample_9.PEsoap
59 Sample_9        ./soap/sperm/Sample_S48/Sample_S48/Sample_9.SEsoap
60 Sample_R10      ./soap/sperm/Sample_R10/Sample_R10/Sample_R10.PEsoap
61 Sample_R10      ./soap/sperm/Sample_R10/Sample_R10/Sample_R10.SEsoap
62 Sample_R11      ./soap/sperm/Sample_R11/Sample_R11/Sample_R11.PEsoap
63 Sample_R11      ./soap/sperm/Sample_R11/Sample_R11/Sample_R11.SEsoap
64 Sample_R11      ./soap/sperm/Sample_R11/Sample_R11.soap
65 Sample_R33      ./soap/sperm/Sample_R33/Sample_R33/Sample_R33.PEsoap
66 Sample_R33      ./soap/sperm/Sample_R33/Sample_R33/Sample_R33.SEsoap
67 Sample_R50      ./soap/sperm/Sample_R50/Sample_R50/Sample_R50.PEsoap
68 Sample_R50      ./soap/sperm/Sample_R50/Sample_R50/Sample_R50.SEsoap
69 Sample_R7       ./soap/sperm/Sample_R7/Sample_R7/Sample_R7.PEsoap
70 Sample_R7       ./soap/sperm/Sample_R7/Sample_R7/Sample_R7.SEsoap
71 Sample_R8       ./soap/sperm/Sample_R8/Sample_R8/Sample_R8.PEsoap
72 Sample_R8       ./soap/sperm/Sample_R8/Sample_R8/Sample_R8.SEsoap
73 Sample_R9       ./soap/sperm/Sample_R9/Sample_R9/Sample_R9.PEsoap
74 Sample_R9       ./soap/sperm/Sample_R9/Sample_R9/Sample_R9.SEsoap
75 Sample_S103     ./soap/sperm/Sample_S103/Sample_S103/Sample_S103.PEsoap
76 Sample_S103     ./soap/sperm/Sample_S103/Sample_S103/Sample_S103.SEsoap
77 Sample_S104     ./soap/newsperm/Sample_S104/Sample_S104/Sample_S104.PEsoap
78 Sample_S104     ./soap/newsperm/Sample_S104/Sample_S104/Sample_S104.SEsoap
79 Sample_S105     ./soap/newsperm/Sample_S105/Sample_S105/Sample_S105.PEsoap
80 Sample_S105     ./soap/newsperm/Sample_S105/Sample_S105/Sample_S105.SEsoap
81 Sample_S106     ./soap/sperm/Sample_S106/Sample_S106.R1_sequence.soap
82 Sample_S107     ./soap/sperm/Sample_S107/Sample_S107/Sample_S107.PEsoap
83 Sample_S107     ./soap/sperm/Sample_S107/Sample_S107/Sample_S107.SEsoap
84 Sample_S108     ./soap/sperm/Sample_S108/Sample_S108.R1_sequence.soap
85 Sample_S109     ./soap/sperm/Sample_S109/Sample_S109/Sample_S109.PEsoap
86 Sample_S109     ./soap/sperm/Sample_S109/Sample_S109/Sample_S109.SEsoap
87 Sample_S110_I   ./soap/sperm/Sample_S110/Sample_S110_I.R1_sequence.soap
88 Sample_S111_I   ./soap/sperm/Sample_S111/Sample_S111_I.R1_sequence.soap
89 Sample_S113     ./soap/newsperm/Sample_S113/Sample_S113.R1_sequence.soap
90 Sample_S114     ./soap/newsperm/Sample_S114/Sample_S114.R1_sequence.soap
91 Sample_S115     ./soap/newsperm/Sample_S115/Sample_S115.R1_sequence.soap
92 Sample_S116     ./soap/newsperm/Sample_S116/Sample_S116.R1_sequence.soap
93 Sample_S117     ./soap/newsperm/Sample_S117/Sample_S117.R1_sequence.soap
94 Sample_S16      ./soap/newsperm/Sample_S16/Sample_S16/Sample_S16.PEsoap
95 Sample_S16      ./soap/newsperm/Sample_S16/Sample_S16/Sample_S16.SEsoap
96 Sample_S17      ./soap/newsperm/Sample_S17/Sample_S17/Sample_S17.PEsoap
97 Sample_S17      ./soap/newsperm/Sample_S17/Sample_S17/Sample_S17.SEsoap
98 Sample_S18      ./soap/newsperm/Sample_S18/Sample_S18/Sample_S18.PEsoap
99 Sample_S18      ./soap/newsperm/Sample_S18/Sample_S18/Sample_S18.SEsoap
100 Sample_S19      ./soap/newsperm/Sample_S19/Sample_S19/Sample_S19.PEsoap
101 Sample_S19      ./soap/newsperm/Sample_S19/Sample_S19/Sample_S19.SEsoap
102 Sample_S1       ./soap/sperm/Sample_S1/Sample_S1/Sample_S1.PEsoap
103 Sample_S1       ./soap/sperm/Sample_S1/Sample_S1/Sample_S1.SEsoap
104 Sample_S20      ./soap/newsperm/Sample_S20/Sample_S20/Sample_S20.PEsoap
105 Sample_S20      ./soap/newsperm/Sample_S20/Sample_S20/Sample_S20.SEsoap
106 Sample_S21      ./soap/newsperm/Sample_S21/Sample_S21/Sample_S21.PEsoap
107 Sample_S21      ./soap/newsperm/Sample_S21/Sample_S21/Sample_S21.SEsoap
108 Sample_S22      ./soap/newsperm/Sample_S22/Sample_S22/Sample_S22.PEsoap
109 Sample_S22      ./soap/newsperm/Sample_S22/Sample_S22/Sample_S22.SEsoap
110 Sample_S23      ./soap/newsperm/Sample_S23/Sample_S23/Sample_S23.PEsoap
111 Sample_S23      ./soap/newsperm/Sample_S23/Sample_S23/Sample_S23.SEsoap
112 Sample_S2       ./soap/sperm/Sample_S2/Sample_S2/Sample_S2.PEsoap
113 Sample_S2       ./soap/sperm/Sample_S2/Sample_S2/Sample_S2.SEsoap
114 Sample_S30      ./soap/newsperm/Sample_S30/Sample_S30/Sample_S30.PEsoap
115 Sample_S30      ./soap/newsperm/Sample_S30/Sample_S30/Sample_S30.SEsoap
116 Sample_S31      ./soap/newsperm/Sample_S31/Sample_S31/Sample_S31.PEsoap
117 Sample_S31      ./soap/newsperm/Sample_S31/Sample_S31/Sample_S31.SEsoap
118 Sample_S37      ./soap/sperm/Sample_S37/Sample_S37/Sample_S37.PEsoap
119 Sample_S37      ./soap/sperm/Sample_S37/Sample_S37/Sample_S37.SEsoap
120 Sample_S39      ./soap/sperm/Sample_S39/Sample_S39/Sample_S39.PEsoap
121 Sample_S39      ./soap/sperm/Sample_S39/Sample_S39/Sample_S39.SEsoap
122 Sample_S3       ./soap/sperm/Sample_S3/Sample_S3/Sample_S3.PEsoap
123 Sample_S3       ./soap/sperm/Sample_S3/Sample_S3/Sample_S3.SEsoap
124 Sample_S40      ./soap/sperm/Sample_S40/Sample_S40/Sample_S40.PEsoap
125 Sample_S40      ./soap/sperm/Sample_S40/Sample_S40/Sample_S40.SEsoap
126 Sample_S45      ./soap/sperm/Sample_S45/Sample_S45/Sample_S45.PEsoap
127 Sample_S45      ./soap/sperm/Sample_S45/Sample_S45/Sample_S45.SEsoap
128 Sample_S4       ./soap/sperm/Sample_S4/Sample_S4/Sample_S4.PEsoap
129 Sample_S4       ./soap/sperm/Sample_S4/Sample_S4/Sample_S4.SEsoap
130 Sample_S51      ./soap/sperm/Sample_S51/Sample_S51/Sample_S51.PEsoap
131 Sample_S51      ./soap/sperm/Sample_S51/Sample_S51/Sample_S51.SEsoap
132 Sample_S56      ./soap/sperm/Sample_S56/Sample_S56/Sample_S56.PEsoap
133 Sample_S56      ./soap/sperm/Sample_S56/Sample_S56/Sample_S56.SEsoap
134 Sample_S5       ./soap/sperm/Sample_S5/Sample_S5/Sample_S5.PEsoap
135 Sample_S5       ./soap/sperm/Sample_S5/Sample_S5/Sample_S5.SEsoap
136 Sample_S60      ./soap/newsperm/Sample_S60/Sample_S60/Sample_S60.PEsoap
137 Sample_S60      ./soap/newsperm/Sample_S60/Sample_S60/Sample_S60.SEsoap
138 Sample_S68      ./soap/sperm/Sample_S68/Sample_S68.R1_sequence.soap
139 Sample_S69      ./soap/newsperm/Sample_S69/Sample_S69/Sample_S69.PEsoap
140 Sample_S69      ./soap/newsperm/Sample_S69/Sample_S69/Sample_S69.SEsoap
141 Sample_S6       ./soap/sperm/Sample_S6/Sample_S6/Sample_S6.PEsoap
142 Sample_S6       ./soap/sperm/Sample_S6/Sample_S6/Sample_S6.SEsoap
143 Sample_S70      ./soap/newsperm/Sample_S70/Sample_S70/Sample_S70.PEsoap
144 Sample_S70      ./soap/newsperm/Sample_S70/Sample_S70/Sample_S70.SEsoap
145 Sample_S77      ./soap/newsperm/Sample_S77/Sample_S77/Sample_S77.PEsoap
146 Sample_S77      ./soap/newsperm/Sample_S77/Sample_S77/Sample_S77.SEsoap
147 Sample_S77      ./soap/sperm/Sample_S77/Sample_S77/Sample_S77.PEsoap
148 Sample_S77      ./soap/sperm/Sample_S77/Sample_S77/Sample_S77.SEsoap
149 Sample_S78      ./soap/newsperm/Sample_S78/Sample_S78/Sample_S78.PEsoap
150 Sample_S78      ./soap/newsperm/Sample_S78/Sample_S78/Sample_S78.SEsoap
151 Sample_S78      ./soap/sperm/Sample_S78/Sample_S78/Sample_S78.PEsoap
152 Sample_S78      ./soap/sperm/Sample_S78/Sample_S78/Sample_S78.SEsoap
153 Sample_S79      ./soap/sperm/Sample_S79/Sample_S79/Sample_S79.PEsoap
154 Sample_S79      ./soap/sperm/Sample_S79/Sample_S79/Sample_S79.SEsoap
155 Sample_S81      ./soap/newsperm/Sample_S81/Sample_S81/Sample_S81.PEsoap
156 Sample_S81      ./soap/newsperm/Sample_S81/Sample_S81/Sample_S81.SEsoap
157 Sample_S81      ./soap/sperm/Sample_S81/Sample_S81/Sample_S81.PEsoap
158 Sample_S81      ./soap/sperm/Sample_S81/Sample_S81/Sample_S81.SEsoap
159 Sample_S82      ./soap/sperm/Sample_S82/Sample_S82/Sample_S82.PEsoap
160 Sample_S82      ./soap/sperm/Sample_S82/Sample_S82/Sample_S82.SEsoap
161 Sample_S83      ./soap/sperm/Sample_S83/Sample_S83/Sample_S83.PEsoap
162 Sample_S83      ./soap/sperm/Sample_S83/Sample_S83/Sample_S83.SEsoap
163 Sample_S84      ./soap/newsperm/Sample_S84/Sample_S84/Sample_S84.PEsoap
164 Sample_S84      ./soap/newsperm/Sample_S84/Sample_S84/Sample_S84.SEsoap
165 Sample_S84      ./soap/sperm/Sample_S84/Sample_S84/Sample_S84.PEsoap
166 Sample_S84      ./soap/sperm/Sample_S84/Sample_S84/Sample_S84.SEsoap
167 Sample_S85      ./soap/sperm/Sample_S85/Sample_S85/Sample_S85.PEsoap
168 Sample_S85      ./soap/sperm/Sample_S85/Sample_S85/Sample_S85.SEsoap
169 Sample_S86      ./soap/sperm/Sample_S86/Sample_S86/Sample_S86.PEsoap
170 Sample_S86      ./soap/sperm/Sample_S86/Sample_S86/Sample_S86.SEsoap
171 Sample_S87      ./soap/newsperm/Sample_S87/Sample_S87/Sample_S87.PEsoap
172 Sample_S87      ./soap/newsperm/Sample_S87/Sample_S87/Sample_S87.SEsoap
173 Sample_S87      ./soap/sperm/Sample_S87/Sample_S87/Sample_S87.PEsoap
174 Sample_S87      ./soap/sperm/Sample_S87/Sample_S87/Sample_S87.SEsoap
175 Sample_S88      ./soap/sperm/Sample_S88/Sample_S88/Sample_S88.PEsoap
176 Sample_S88      ./soap/sperm/Sample_S88/Sample_S88/Sample_S88.SEsoap
177 Sample_S89      ./soap/sperm/Sample_S89/Sample_S89/Sample_S89.PEsoap
178 Sample_S89      ./soap/sperm/Sample_S89/Sample_S89/Sample_S89.SEsoap
179 Sample_S90      ./soap/sperm/Sample_S90/Sample_S90/Sample_S90.PEsoap
180 Sample_S90      ./soap/sperm/Sample_S90/Sample_S90/Sample_S90.SEsoap
181 Sample_S91      ./soap/sperm/Sample_S91/Sample_S91/Sample_S91.PEsoap
182 Sample_S91      ./soap/sperm/Sample_S91/Sample_S91/Sample_S91.SEsoap
183 Sample_S92      ./soap/sperm/Sample_S92/Sample_S92/Sample_S92.PEsoap
184 Sample_S92      ./soap/sperm/Sample_S92/Sample_S92/Sample_S92.SEsoap
185 Sample_S93      ./soap/sperm/Sample_S93/Sample_S93/Sample_S93.PEsoap
186 Sample_S93      ./soap/sperm/Sample_S93/Sample_S93/Sample_S93.SEsoap
187 Sample_S94      ./soap/sperm/Sample_S94/Sample_S94/Sample_S94.PEsoap
188 Sample_S94      ./soap/sperm/Sample_S94/Sample_S94/Sample_S94.SEsoap
189 Sample_S95      ./soap/sperm/Sample_S95/Sample_S95/Sample_S95.PEsoap
190 Sample_S95      ./soap/sperm/Sample_S95/Sample_S95/Sample_S95.SEsoap
191 Sample_S96      ./soap/sperm/Sample_S96/Sample_S96/Sample_S96.PEsoap
192 Sample_S96      ./soap/sperm/Sample_S96/Sample_S96/Sample_S96.SEsoap
193 Sample_S97      ./soap/sperm/Sample_S97/Sample_S97/Sample_S97.PEsoap
194 Sample_S97      ./soap/sperm/Sample_S97/Sample_S97/Sample_S97.SEsoap
195 Sample_S98      ./soap/sperm/Sample_S98/Sample_S98/Sample_S98.PEsoap
196 Sample_S98      ./soap/sperm/Sample_S98/Sample_S98/Sample_S98.SEsoap
197 Sample_S99      ./soap/sperm/Sample_S99/Sample_S99/Sample_S99.PEsoap
198 Sample_S99      ./soap/sperm/Sample_S99/Sample_S99/Sample_S99.SEsoap
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