BioInfo/BS-Seq/bwa-meth/setup.py

   1 import ez_setup
   2 import sys
   3 ez_setup.use_setuptools()
   4 from setuptools import setup
   5
   6 # from mpld3
   7 def get_version(path):
   8     """Get the version info from the mpld3 package without importing it"""
   9     import ast
  10
  11     with open(path) as init_file:
  12         module = ast.parse(init_file.read())
  13
  14     version = (ast.literal_eval(node.value) for node in ast.walk(module)
  15                if isinstance(node, ast.Assign)
  16                and node.targets[0].id == "__version__")
  17     try:
  18         return next(version)
  19     except StopIteration:
  20         raise ValueError("version could not be located")
  21
  22 install_requires = ['toolshed']
  23 if sys.version_info[:2] < (2, 7):
  24     install_requires.extend(["argparse", "ordereddict"])
  25
  26 setup(name='bwameth',
  27       version=get_version("bwameth.py"),
  28       description="align BS-Seq reads with bwa mem",
  29       py_modules=['bwameth'],
  30       author="Brent Pedersen",
  31       author_email="bpederse@gmail.com",
  32       license="MIT",
  33       install_requires=install_requires,
  34       long_description=open('README.md').read(),
  35       classifiers=[
  36       'Topic :: Scientific/Engineering :: Bio-Informatics',
  37       'Programming Language :: Python :: 2',
  38       'Programming Language :: Python :: 3'
  39       ],
  40       scripts=['bwameth.py']
  41 )