etc/snakemake/Makefile

   1 run: clean
   2         snakemake -p -c4 >r.log 2>r.err
   3         @echo ... ...
   4         cat -n r.log
   5         @echo ... ...
   6         cat -n r.err | head -n26
   7         @echo ... ...
   8         cat -n r.err | tail -n19
   9         @echo ... ...
  10         ls -l results.sha2 r.log r.err
  11         @echo ... ...
  12         find .Trash/
  13
  14 dry:
  15         snakemake -p -c4 -n
  16
  17 help:
  18         snakemake -c2 help
  19
  20 clean:
  21         rm -fr r.log r.err .Trash results
  22
  23 pkg: clean
  24         rm -fr snakemakeExample.tgz
  25         tar -czvf snakemakeExample.tgz config workflow exampleData files.lst Makefile
  26         ls -l snakemakeExample.tgz