released/pIRS.old/pIRS_simulator/test/ref_seq_indel.lst

   1 seq     5630    +       100     GCCAGGCACAATTACACCAATCAGGTTTTCCCGCCATGTAGTGCTTCAACTTGTCACTGAATCCAGCTAAGGTATGTACGCACTTCTAACAATCCTTCCT
   2 seq     10634   +       1       C
   3 seq     18301   -       1       C
   4 seq     22479   -       3       GGG
   5 seq     35241   +       2       TC
   6 seq     36175   -       4       CAGA
   7 seq     47052   +       1       T
   8 seq     56208   -       1       T
   9 seq     64266   +       100     TACGAGACGAAACGACTTCGACAGGCCTACGTCGCAAACCAACCGCGCATGTAGCGTGATTGGTATTTTAATACAGGGGCAAAAGCCCTCACTGAGCTCT
  10 seq     72039   -       1       G
  11 seq     72756   -       1       C
  12 seq     77918   -       1       C
  13 seq     81617   +       1       T
  14 seq     97610   -       1       C
  15 seq     100770  +       1       C
  16 seq     113693  +       1       G
  17 seq     143347  -       1       A
  18 seq     162473  +       1       G
  19 seq     163691  +       1       G
  20 seq     169744  +       1       C
  21 seq     173614  -       1       T
  22 seq     178218  -       1       G
  23 seq     193810  +       1       A
  24 seq     195429  +       200     ATGCTGCGAGTCAACCTTCCTAGGTTACCCAATGCGTCATTTTTTAACGCGCCTTTGTAGTAGGCTAAATTGGGCACACTCTACGTATGACCTTTAGGACCTTTAATCAAAAGACATCTCCACATAAAGACTGACGAATTTTTCTACGCTTGTACCTCCCAGTGGAAGATCTGAACAATCTGGGCTTAAACAGAGAAGCT
  25 seq     214855  +       100     CGGTCCACCTCAATGCGACGAGCCCTCCAGACTCTAGTCTCGTCCCGTCTAACCCGAGGATGAGTTGCGTATATACTGTACTACACTAGCTCGTTCGCCA
  26 seq     230103  -       1       C
  27 seq     232362  +       1       A
  28 seq     245472  +       1       C
  29 seq     266350  +       2       GA
  30 seq     279662  +       200     TGAGTTGAGCCGGTGAACCGAAGGCTCAATATCACATGTCTATCTAAGCCAAAGGCCTCAGATGATGGCCTAACCTCCCGCAGCGTGGGGGTGCCGATACTGCTTCGAGGGTGTAAGCGATATCAATAGGACACATGGTTACGGACCGGTCCGAGGTCGCTGGTGGGAACTTCACCCGGTATAGTGAGTGTCTCACTCCG
  31 seq     284865  -       100     TAATGTCACGTCGAAACCACAATCATCTGTGCCCCAGACCGGGAGAGATAGTCTGCAGCCGACAATTCGCCGCTTGACATCACCGGGCTCCTCGCATAAT
  32 seq     313173  -       1       G
  33 seq     323933  +       2       GT
  34 seq     348899  -       1       G
  35 seq     354289  +       100     CTTGTATCTTATCTCCAATTCGTATGCTATGCCCGACCCAACTCAAGAACGAGCACTCAGAGTCTCCAGGAGTTTGTCGGCAGTCGATTTCTCATTAATG
  36 seq     372751  -       2       AT
  37 seq     385742  +       2       CG
  38 seq     403867  -       2       GC
  39 seq     435557  -       2       AA
  40 seq     441335  +       1       T
  41 seq     444751  -       1       G
  42 seq     450920  +       1       A
  43 seq     456758  +       1       C
  44 seq     461243  +       3       GGT
  45 seq     485267  -       4       GATT
  46 seq     493313  +       1       G
  47 seq     493644  -       1       C
  48 seq     547233  -       2       AC
  49 seq     554983  +       1       T
  50 seq     556032  -       1       A
  51 seq     560028  +       3       CTT
  52 seq     564759  +       1       T
  53 seq     565756  +       100     GTCGGACTTCTGATCTAGCTGCCTATGCGCAAACCGCGCATTCTGGCGAGCGTCCTATACTACTCGAGTCCGAGACACTATTGCAGAACTCATCGTTGCG
  54 seq     566074  +       2       TG
  55 seq     567065  -       1       A
  56 seq     595192  +       1       T
  57 seq     595746  +       1       G
  58 seq     605724  -       1       C
  59 seq     613804  +       1       A
  60 seq     614587  -       3       TCG
  61 seq     630291  -       1       A
  62 seq     631404  -       2       AG
  63 seq     650936  +       1       T
  64 seq     651957  +       3       TAA
  65 seq     655873  +       1       G
  66 seq     658701  +       4       ATCC
  67 seq     665022  -       1       T
  68 seq     675382  +       2       AC
  69 seq     675843  -       3       ATT
  70 seq     687029  -       1       G
  71 seq     698163  +       1       T
  72 seq     707055  +       1       T
  73 seq     713891  -       1       A
  74 seq     715871  +       1       A
  75 seq     731635  +       100     AGCTCGCAATAGGGCACATCAAAGCCGCACCATGTTTATTTTCAACACCGGAGGGTTAATACGTGCGCAAATTCTTGGAGACGGTACCAAAACGGTGAAG
  76 seq     734621  +       100     AACGATCGCAACCGTAGACCAACAGTTAGGGGGGAGCATGATTCAGCGGCTCCTCTGAGAGACTGCCTCACCGAGGGGATTGAACCTTCCGGATCGAGAA
  77 seq     736261  +       1       C
  78 seq     744765  +       1       C
  79 seq     745780  -       1       A
  80 seq     748643  -       2       CG
  81 seq     752713  +       1       C
  82 seq     777884  -       1       T
  83 seq     808071  +       3       TAG
  84 seq     811560  +       1       C
  85 seq     813630  -       1       G
  86 seq     826968  +       1       G
  87 seq     828481  +       1       A
  88 seq     853869  +       3       CCT
  89 seq     871406  +       1       T
  90 seq     876714  +       1       C
  91 seq     883280  +       1       T
  92 seq     897704  +       500     AGGGGGAAGTCATTATAATTACAGCAGATTTGACAGTAGCTTAGGAACATAAATCCTTCGGAAGCAATAGATCAAGTATTTTGTGTACGCGACGCGCCCCGATTATCTTACGGTCAGCAAGGATACCCCCCTCAGCTGTGGAAATCTCGTCACCTCCACGCGCGGTGCCCTGCTGAACCGAGGCTCCACGGCATTGCCTGGGATCCTCGATCGCGAGTATCCACAGTCTGGAAGTCTCGACCCGGTGACGGGTGGGACTGGCGGGCGCGACGAGAGAGCCATTGCCAACTGTTACCCTGGGGAGAAAAGCCGATAAAAACGGACGAGTTACCGCTCCGCTTCAGAAGATGACAAGGAACGACTCGCGGTTCGACAAAGTTATAATGGGGGAGTTTCACTTTTATAAGACCTCATATCGCTACATTTTTTGCGCCCACTAGAGGACGGCATATTAGGGCCCGGTTTATTGGCGATCCCTGAGCTCCCTTCTATCTGTGAGA
  93 seq     909421  +       100     GTGGCTTGGAGTCCAGCGAGCACGGTCATTACCGTGACAGCCCGGAATGACTTGCCACCTACTCTGTTTGAATCGCCCTTCAGACGCCTGATTTTCAGAT
  94 seq     912368  +       1       A
  95 seq     918994  -       1       A
  96 seq     923107  -       2       CA
  97 seq     939580  -       2       GC
  98 seq     941065  -       1       C
  99 seq     962937  +       1       A
 100 seq     971611  -       3       GCC
 101 seq     973833  -       1       G
 102 seq     982163  +       2       GT
 103 seq     988892  +       1       A
 104 seq     992419  -       1       C