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[GalaxyCodeBases.git] / BGI / SOAPcoverage / gzstream.cpp
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1 // ============================================================================
2 // gzstream, C++ iostream classes wrapping the zlib compression library.
3 // Copyright (C) 2001 Deepak Bandyopadhyay, Lutz Kettner
4 //
5 // This library is free software; you can redistribute it and/or
6 // modify it under the terms of the GNU Lesser General Public
7 // License as published by the Free Software Foundation; either
8 // version 2.1 of the License, or (at your option) any later version.
9 //
10 // This library is distributed in the hope that it will be useful,
11 // but WITHOUT ANY WARRANTY; without even the implied warranty of
12 // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
13 // Lesser General Public License for more details.
15 // You should have received a copy of the GNU Lesser General Public
16 // License along with this library; if not, write to the Free Software
17 // Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
18 // ============================================================================
20 // File : gzstream.C
21 // Revision : $Revision: 1.7 $
22 // Revision_date : $Date: 2003/01/08 14:41:27 $
23 // Author(s) : Deepak Bandyopadhyay, Lutz Kettner
25 // Standard streambuf implementation following Nicolai Josuttis, "The
26 // Standard C++ Library".
27 // ============================================================================
29 #include "gzstream.h"
30 #include <iostream>
31 #include <string.h> // for memcpy
33 #ifdef GZSTREAM_NAMESPACE
34 namespace GZSTREAM_NAMESPACE {
35 #endif
37 // ----------------------------------------------------------------------------
38 // Internal classes to implement gzstream. See header file for user classes.
39 // ----------------------------------------------------------------------------
41 // --------------------------------------
42 // class gzstreambuf:
43 // --------------------------------------
45 gzstreambuf* gzstreambuf::open( const char* name, int open_mode) {
46 if ( is_open())
47 return (gzstreambuf*)0;
48 mode = open_mode;
49 // no append nor read/write mode
50 if ((mode & std::ios::ate) || (mode & std::ios::app)
51 || ((mode & std::ios::in) && (mode & std::ios::out)))
52 return (gzstreambuf*)0;
53 char fmode[10];
54 char* fmodeptr = fmode;
55 if ( mode & std::ios::in)
56 *fmodeptr++ = 'r';
57 else if ( mode & std::ios::out)
58 *fmodeptr++ = 'w';
59 *fmodeptr++ = 'b';
60 *fmodeptr = '\0';
61 file = gzopen( name, fmode);
62 if (file == 0)
63 return (gzstreambuf*)0;
64 opened = 1;
65 return this;
68 gzstreambuf * gzstreambuf::close() {
69 if ( is_open()) {
70 sync();
71 opened = 0;
72 if ( gzclose( file) == Z_OK)
73 return this;
75 return (gzstreambuf*)0;
78 /*unsigned long long gzstreambuf::tellg() {
79 return gzoffset(file);
80 }*/
82 int gzstreambuf::underflow() { // used for input buffer only
83 if ( gptr() && ( gptr() < egptr()))
84 return * reinterpret_cast<unsigned char *>( gptr());
86 if ( ! (mode & std::ios::in) || ! opened)
87 return EOF;
88 // Josuttis' implementation of inbuf
89 int n_putback = gptr() - eback();
90 if ( n_putback > 4)
91 n_putback = 4;
92 memcpy( buffer + (4 - n_putback), gptr() - n_putback, n_putback);
94 int num = gzread( file, buffer+4, bufferSize-4);
95 if (num <= 0) // ERROR or EOF
96 return EOF;
98 // reset buffer pointers
99 setg( buffer + (4 - n_putback), // beginning of putback area
100 buffer + 4, // read position
101 buffer + 4 + num); // end of buffer
103 // return next character
104 return * reinterpret_cast<unsigned char *>( gptr());
107 int gzstreambuf::flush_buffer() {
108 // Separate the writing of the buffer from overflow() and
109 // sync() operation.
110 int w = pptr() - pbase();
111 if ( gzwrite( file, pbase(), w) != w)
112 return EOF;
113 pbump( -w);
114 return w;
117 int gzstreambuf::overflow( int c) { // used for output buffer only
118 if ( ! ( mode & std::ios::out) || ! opened)
119 return EOF;
120 if (c != EOF) {
121 *pptr() = c;
122 pbump(1);
124 if ( flush_buffer() == EOF)
125 return EOF;
126 return c;
129 int gzstreambuf::sync() {
130 // Changed to use flush_buffer() instead of overflow( EOF)
131 // which caused improper behavior with std::endl and flush(),
132 // bug reported by Vincent Ricard.
133 if ( pptr() && pptr() > pbase()) {
134 if ( flush_buffer() == EOF)
135 return -1;
137 return 0;
140 // --------------------------------------
141 // class gzstreambase:
142 // --------------------------------------
144 gzstreambase::gzstreambase( const char* name, int mode) {
145 init( &buf);
146 open( name, mode);
149 gzstreambase::~gzstreambase() {
150 buf.close();
153 void gzstreambase::open( const char* name, int open_mode) {
154 if ( ! buf.open( name, open_mode))
155 clear( rdstate() | std::ios::badbit);
158 void gzstreambase::close() {
159 if ( buf.is_open())
160 if ( ! buf.close())
161 clear( rdstate() | std::ios::badbit);
164 #ifdef GZSTREAM_NAMESPACE
165 } // namespace GZSTREAM_NAMESPACE
166 #endif
168 // ============================================================================
169 // EOF //