modified: openstmerge.py

[GalaxyCodeBases.git] / etc / gatk-wdl / fm2gatk / run.sh

#!/bin/sh
# biowdl-input-converter fm2.csv >fm2.samples.json

echo Begin: `date`

JAVA_OPTS="-Dbackend.providers.Local.config.concurrent-job-limit=16" cromwell run -o cromwell_options_no_user.json -i fm2.json germline.wdl >fm2.log

echo End: `date`