modified: src1/worker.c

[GalaxyCodeBases.git] / R / FGI / rmd4 / files / database.csv

__/SNP,rs10500915,rs10756250,rs10991211,rs11076452,rs1159311,rs11659227,rs1241304,rs12638242,rs13090964,rs13279486,rs1377902,rs17684347,rs1861718,rs1876456,rs200162,rs2022858,rs2031420,rs2057041,rs2060337,rs2216802,rs2310738,rs2386626,rs2813838,rs2826121,rs2829433,rs295886,rs2963129,rs308685,rs35200965,rs35637306,rs387543,rs4073212,rs412467,rs41446051,rs438187,rs4425603,rs4620756,rs4762175,rs4833043,rs4881174,rs4926703,rs5769852,rs6063600,rs6455989,rs6954149,rs7157971,rs72671448,rs7928133,rs7995018,rs8027868,rs8070506,rs8105430,rs897756,rs9541254,rs968975,rs9917605,rs9943694\r
JK,C,C,CA,C,G,A,G,C,G,C,Null,C,TA,GA,TC,AG,CG,GA,T,G,T,CA,C,GT,C,T,CA,CA,CA,C,AT,G,AG,C,G,A,A,CT,GC,AG,A,CT,CA,T,GC,GT,CT,G,C,G,C,TC,CT,A,GC,C,Null\r
KQSZ1,C,TC,Null,TC,GA,T,CA,A,Null,Null,T,CG,C,G,Null,Null,Null,Null,G,GT,Null,CA,Null,Null,Null,CT,Null,Null,Null,CG,C,Null,Null,G,Null,Null,G,Null,C,AG,Null,T,A,Null,Null,Null,CT,GA,CA,Null,Null,Null,CT,A,Null,TC,Null\r
KQSZ10,CA,T,CA,TC,A,T,A,A,GT,C,TC,CG,TC,A,TC,AG,AG,G,GT,G,GT,C,G,GT,T,T,A,CA,CA,CG,T,CT,AG,CA,G,TC,AT,GT,GC,AT,G,CT,C,CT,GC,G,CT,G,C,GT,C,C,T,TA,T,T,GC\r
KQSZ11,CA,T,A,TC,GA,T,A,C,GT,TC,G,G,CA,GA,T,A,CA,A,G,A,GT,CA,G,GT,C,CT,CA,CA,CA,CG,T,GT,AG,CG,G,CA,AG,T,GC,T,GA,CT,CA,CT,A,TC,C,G,C,GT,T,T,T,T,GT,T,A\r
KQSZ12,CA,TC,C,TC,GA,T,CA,C,T,C,GT,G,CA,T,TC,AG,CA,GA,GT,G,GT,A,G,GT,GT,CT,C,CA,A,Null,CT,CG,AG,CA,GA,CA,Null,CT,C,AT,GA,T,A,T,A,GC,C,A,GA,TA,TC,TC,CT,TA,GC,TC,CA\r
KQSZ13,A,TC,CA,T,GA,AT,A,CA,T,CA,GC,CG,TC,A,C,AG,G,GA,GT,GT,GT,CA,C,GT,TC,CT,C,C,C,CG,CT,CG,AG,CG,G,C,AG,CG,CA,GT,A,T,CA,T,GA,TC,CT,G,G,T,C,C,C,A,G,T,CA\r
KQSZ14,C,T,Null,TC,GA,T,Null,CA,GT,TC,TC,G,C,AT,TC,G,Null,A,T,AG,T,Null,C,GT,C,CT,C,CA,Null,CG,AT,T,AG,CG,GA,C,A,CT,A,AT,A,T,C,CT,CA,C,T,GA,CA,G,T,Null,CT,TA,T,TC,A\r
KQSZ15,Null,TC,A,TC,A,A,A,CA,G,TA,GT,CG,CA,T,TC,A,A,A,T,GT,T,CA,GC,T,GC,CT,CA,CA,CA,C,CT,GT,AG,CG,GA,TA,G,T,CA,GT,A,CT,A,CT,GA,C,CT,A,GA,T,C,T,CT,A,G,TC,A\r
KQSZ16,Null,Null,CA,Null,Null,Null,Null,Null,GT,C,Null,Null,Null,Null,C,A,C,G,Null,Null,T,Null,Null,GT,T,Null,CA,A,A,Null,Null,CT,AG,Null,A,C,Null,CT,Null,Null,G,Null,Null,T,CA,G,Null,Null,Null,G,C,TC,Null,Null,G,Null,GC\r
KQSZ17,A,T,A,C,GA,AT,Null,CA,T,C,TC,CG,Null,AT,C,G,A,A,G,GT,AT,CA,C,T,T,CT,CA,C,CA,Null,T,CT,AG,G,GA,A,Null,T,CA,Null,G,CT,A,CT,CA,TC,T,GA,GC,T,C,TC,C,Null,GC,T,G\r
KQSZ18,GC,TC,A,TC,G,A,Null,C,G,CA,TC,CG,C,GT,TC,G,G,GA,T,AT,AT,A,GC,G,T,T,CA,C,A,CG,T,CT,AG,G,GA,A,AG,CT,GC,AT,GA,C,CA,T,G,TC,C,GA,C,GT,TC,TC,CT,A,GT,T,GA\r
KQSZ19,CA,TC,Null,TC,GA,T,C,CA,Null,Null,GC,C,TC,A,Null,Null,Null,Null,G,AT,Null,CA,Null,Null,Null,C,Null,Null,Null,C,CT,Null,Null,G,Null,Null,A,Null,GC,AT,Null,C,CA,Null,Null,Null,CT,A,G,Null,Null,Null,CT,T,Null,C,Null\r
KQSZ2,CA,TC,CA,T,GA,AT,CA,A,GA,A,T,CG,TC,AT,T,A,CG,A,T,T,AG,C,GC,GT,C,CT,C,CA,CA,CG,T,T,A,C,GA,A,A,T,GC,GT,A,C,CA,C,CA,GT,C,G,CA,GT,T,C,C,TA,G,TC,C\r
KQSZ20,CA,C,CA,TC,GA,AT,CA,CA,GT,CA,TC,AG,C,AT,TC,A,CG,G,GT,GT,AG,C,Null,T,TC,C,Null,C,C,C,C,CG,A,CA,A,CA,A,GT,GA,A,A,CT,A,Null,GA,Null,C,GA,GA,T,TC,TC,CT,T,GT,TC,CA\r
KQSZ21,GA,C,C,C,GA,AT,A,CA,TA,TC,GT,CG,CA,GA,C,Null,AG,GA,GT,AG,A,A,Null,G,T,C,Null,CA,C,G,A,GT,AG,G,GA,A,G,T,A,AG,G,CT,CA,CT,C,Null,CT,GA,G,Null,TC,TC,T,TA,GC,T,GC\r
KQSZ22,CA,TC,CA,C,G,AT,C,C,GT,C,GT,G,C,GA,C,G,G,G,GT,G,T,C,Null,GT,TC,CT,Null,CA,C,C,AT,G,AG,G,GA,CA,AG,CT,C,GT,GA,CT,CA,C,GC,TC,CT,GA,GA,T,TC,C,T,TA,GC,C,CA\r
KQSZ23,C,T,A,C,GA,T,CA,C,T,TC,GT,G,C,AT,T,AG,C,T,T,G,A,C,GC,T,T,C,CA,A,C,C,T,T,A,C,G,A,AT,T,C,AT,GA,CT,A,CT,GA,TC,C,A,CA,G,C,C,T,TA,TC,T,C\r
KQSZ24,GA,T,C,TC,A,A,C,C,GT,TA,GT,CG,TA,AT,C,AG,AG,G,T,GT,AT,CA,G,GT,TC,CT,A,A,CA,CG,C,CT,AG,AG,GA,CA,GT,CT,A,T,A,T,C,T,C,TC,C,G,GA,G,TC,C,C,TA,GC,C,CA\r
KQSZ3,GC,TC,CA,C,GA,T,Null,CA,GA,TA,TC,CG,TC,Null,TC,AG,CA,GA,T,T,GT,CA,G,GT,T,C,A,CA,C,G,T,G,A,CG,GA,TC,AG,G,A,T,GA,T,C,CT,A,GC,CT,A,C,GT,T,T,C,A,GC,TC,C\r
KQSZ4,GA,TC,C,TC,A,T,AG,CA,TA,CA,GT,CG,T,AT,TC,A,Null,G,GT,G,GT,A,GC,G,TC,CT,CA,A,CA,CG,CA,T,A,AG,GA,TC,AG,T,GC,GT,A,T,C,T,GA,TC,CT,A,GA,Null,TC,TC,CT,TA,GT,TC,A\r
KQSZ5,CA,TC,C,TC,A,A,CA,CA,T,CA,T,G,TC,GT,C,AG,AG,GT,GT,G,AG,CA,C,GT,T,T,CA,A,CA,CG,CT,G,G,G,GA,C,AG,GT,GC,T,A,CT,A,T,CA,G,C,G,GC,G,T,C,CT,TA,G,TC,A\r
KQSZ6,CA,T,Null,C,A,T,AG,CA,GT,Null,TC,CG,CA,GA,Null,AG,Null,Null,GT,GT,Null,CA,Null,Null,Null,T,Null,Null,Null,CG,CA,Null,Null,G,Null,Null,AG,Null,CA,GT,Null,C,CA,Null,Null,Null,CT,GA,GC,Null,TC,Null,C,T,Null,TC,Null\r
KQSZ7,A,T,C,C,GA,A,Null,C,GT,CA,G,CG,T,G,T,AG,A,GA,GT,Null,GT,C,GC,G,T,CT,CA,TA,CA,G,C,CT,A,G,GA,A,AT,CT,CA,T,A,CT,CA,CT,CA,C,C,G,G,GT,C,C,C,A,GT,TC,C\r
KQSZ8,CA,TC,CA,C,GA,AT,A,A,T,CA,G,CG,A,G,C,AG,G,GA,GT,G,GT,C,GC,GT,T,CT,A,TC,A,G,CT,CG,G,CG,GA,A,AG,T,GA,T,A,T,A,CT,A,G,C,A,A,G,C,TC,C,A,TC,TC,CA\r
KQSZ9,GA,C,CA,TC,GA,T,CG,CA,Null,CA,GT,C,TC,G,TC,A,Null,GT,G,GT,AT,C,G,GT,TC,T,Null,TC,CA,CG,CT,Null,AG,AG,A,CA,AG,T,CA,A,A,CT,CA,CT,A,GC,CT,GA,GA,Null,C,TC,CT,T,Null,TC,GA\r
LD,GC,TC,CA,C,GA,T,AG,CA,GA,TA,TC,CG,TC,Null,TC,AG,CA,GA,T,T,GT,CA,T,GT,T,C,A,CA,C,G,T,G,A,CG,GA,TC,AG,G,A,T,GA,T,C,CT,A,GC,CT,A,C,GT,T,T,C,A,GC,TC,C\r
N,A,Null,Null,Null,Null,Null,A,Null,Null,Null,Null,Null,Null,G,Null,Null,C,Null,Null,Null,Null,Null,Null,Null,Null,Null,Null,Null,Null,G,CA,T,A,Null,Null,Null,Null,Null,Null,Null,Null,Null,Null,Null,Null,Null,Null,Null,Null,Null,Null,Null,Null,Null,Null,Null,Null\r
TY1,C,TC,CA,TC,GA,T,CA,A,G,TC,T,CG,C,G,TC,A,G,A,G,GT,GT,CA,GC,GT,C,CT,A,C,CA,CG,C,T,G,G,A,C,G,C,C,AG,A,CT,A,C,GA,TC,CT,GA,CA,G,C,TC,CT,A,T,TC,A\r
TY10,CA,T,CA,TC,A,T,A,A,GT,C,TC,CG,TC,A,TC,AG,AG,G,GT,G,GT,C,G,GT,T,T,A,CA,CA,CG,T,CT,AG,CA,G,TC,AT,GT,GC,AT,G,CT,C,CT,GC,G,CT,G,C,GT,C,C,T,TA,T,T,GC\r
TY11,CA,T,A,TC,GA,T,A,C,GT,TC,G,G,CA,AG,T,A,CA,A,G,A,GT,CA,G,GT,C,CT,CA,CA,CA,CG,T,GT,AG,CG,G,CA,AG,T,GC,T,GA,CT,CA,CT,A,TC,C,G,C,GT,T,T,T,T,GT,T,A\r
TY12,CA,TC,C,TC,GA,T,CA,C,T,C,GT,G,CA,T,TC,AG,CA,GA,GT,G,GT,A,G,GT,GT,CT,C,CA,A,G,CT,CG,AG,CA,GA,CA,AG,CT,C,AT,GA,T,A,T,A,GC,C,A,GA,TA,TC,TC,CT,TA,GC,TC,CA\r
TY13,A,TC,CA,T,GA,AT,A,CA,T,CA,GC,CG,TC,A,C,AG,G,GA,GT,GT,GT,CA,C,GT,TC,T,C,C,C,CG,CT,CG,AG,CG,G,C,AG,CG,CA,GT,A,T,CA,T,GA,TC,CT,G,G,T,C,C,C,A,G,T,CA\r
TY14,C,T,CA,TC,GA,T,C,CA,GT,TC,TC,G,C,AT,TC,G,C,A,T,AG,T,C,C,GT,C,CT,C,CA,CA,CG,AT,T,AG,CG,GA,C,A,CT,A,AT,A,T,C,CT,CA,C,T,GA,CA,G,T,T,CT,TA,GT,TC,A\r
TY15,C,TC,A,TC,A,A,A,CA,G,TA,GT,CG,CA,T,TC,A,A,A,T,GT,T,CA,GC,T,GC,CT,CA,CA,CA,C,CT,GT,AG,CG,GA,TA,G,T,CA,GT,A,CT,A,CT,GA,C,CT,A,GA,T,C,T,CT,A,G,TC,A\r
TY16,GC,C,CA,C,A,T,A,CA,GT,C,GT,CG,TC,AG,C,A,C,G,T,GT,T,CA,GC,GT,T,CT,CA,A,A,C,CA,CT,AG,G,A,C,G,CT,GA,AT,G,CT,A,T,CA,G,CT,G,G,G,C,TC,T,TA,G,TC,GC\r
TY17,A,T,A,C,GA,AT,C,CA,T,C,TC,CG,C,AT,C,G,A,A,G,GT,AT,CA,C,T,T,Null,CA,C,CA,G,T,CT,AG,G,GA,A,AG,T,CA,GT,G,CT,A,CT,CA,TC,T,GA,G,T,C,TC,C,TA,GC,T,G\r
TY18,GC,TC,A,TC,G,A,Null,C,G,CA,TC,CG,C,GT,TC,G,G,GA,T,Null,AT,A,GC,G,T,T,CA,C,A,Null,T,CT,AG,G,GA,A,AG,CT,GC,AT,GA,C,CA,Null,G,TC,C,GA,C,GT,TC,TC,CT,A,GT,T,GA\r
TY19,CA,TC,C,TC,GA,T,C,CA,GT,TC,GC,C,TC,A,T,A,C,GA,G,AT,T,Null,GC,GT,T,C,CA,CA,A,C,CT,T,AG,G,A,TA,A,CT,GC,AT,G,C,CA,C,GA,GT,CT,A,G,T,TC,T,CT,T,G,C,CA\r
TY2,CA,TC,CA,T,GA,AT,CA,A,GA,A,T,CG,TC,AT,T,A,CG,A,T,T,AG,C,Null,GT,C,T,C,CA,CA,CG,T,T,A,C,GA,A,A,T,GC,GT,A,C,CA,C,CA,Null,C,G,CA,GT,T,C,C,TA,G,TC,C\r
TY20,CA,C,CA,TC,GA,AT,CA,CA,GT,CA,TC,AG,C,AT,TC,A,CG,G,GT,GT,AG,C,Null,T,TC,C,CA,C,C,C,C,CG,A,CA,A,CA,A,GT,GA,A,A,CT,A,T,A,GT,C,GA,GA,T,TC,TC,CT,T,GT,TC,CA\r
TY21,GA,C,C,C,GA,AT,A,CA,T,TC,GT,CG,CA,AG,C,AG,AG,GA,GT,AG,A,A,GC,G,T,C,A,CA,C,G,A,GT,AG,G,GA,A,G,T,A,AG,G,CT,CA,T,C,GC,CT,GA,G,G,TC,TC,T,TA,GC,T,GC\r
TY22,CA,TC,CA,C,G,AT,C,C,GT,C,GT,G,C,AG,C,G,G,G,GT,G,T,C,GC,GT,TC,CT,C,CA,C,C,AT,G,AG,G,GA,CA,AG,CT,C,GT,GA,CT,CA,C,GC,TC,CT,GA,GA,T,TC,C,T,TA,GC,C,CA\r
TY23,C,T,A,C,GA,T,CA,C,T,TC,GT,G,C,AT,T,AG,C,T,T,G,A,C,GC,T,T,C,CA,A,C,C,T,T,A,C,G,A,AT,T,C,AT,GA,CT,A,CT,GA,TC,C,A,CA,G,C,C,T,TA,TC,T,C\r
TY24,GA,T,C,TC,A,A,Null,C,GT,TA,GT,CG,TA,AT,C,AG,AG,G,T,GT,AT,CA,Null,GT,TC,Null,A,A,CA,CG,C,CT,AG,AG,GA,CA,GT,CT,A,T,A,T,C,T,C,TC,C,G,GA,G,TC,C,C,TA,GC,C,CA\r
TY3,GC,TC,CA,C,GA,T,Null,CA,GA,TA,TC,CG,TC,Null,TC,AG,CA,GA,T,T,GT,CA,Null,GT,T,C,A,CA,C,G,T,G,A,CG,GA,TC,AG,G,A,T,GA,T,C,CT,A,GC,CT,A,C,GT,T,T,C,A,GC,TC,C\r
TY4,GA,TC,C,TC,A,T,AG,CA,TA,CA,GT,CG,T,AT,TC,A,CG,G,GT,G,GT,A,GC,G,TC,Null,CA,A,CA,Null,CA,T,A,AG,GA,TC,AG,T,GC,GT,A,T,C,T,GA,TC,CT,A,GA,G,TC,TC,CT,TA,GT,TC,A\r
TY5,CA,TC,C,TC,A,A,CA,CA,T,CA,T,G,TC,GT,C,AG,AG,GT,GT,G,AG,CA,C,GT,T,T,CA,A,CA,CG,CT,G,G,G,GA,C,AG,GT,GC,T,A,CT,A,T,CA,G,C,G,GC,G,T,C,CT,TA,G,TC,A\r
TY6,CA,T,C,C,A,T,AG,CA,GT,TC,TC,CG,CA,AG,C,AG,AG,GA,GT,GT,GT,CA,C,GT,T,T,A,A,CA,CG,CA,CT,G,G,G,CA,AG,T,CA,GT,A,C,CA,T,G,GT,CT,GA,GC,G,TC,TC,C,T,TC,TC,C\r
TY7,A,T,C,C,GA,A,Null,C,GT,CA,G,CG,T,G,T,AG,A,GA,GT,AT,GT,C,GC,G,T,CT,CA,TA,CA,G,C,CT,A,G,GA,A,AT,CT,CA,T,A,CT,CA,T,CA,C,C,G,G,GT,C,C,C,A,GT,TC,C\r
TY8,CA,TC,CA,C,GA,AT,A,A,T,CA,G,CG,A,G,C,AG,G,GA,GT,G,GT,C,Null,GT,T,CT,A,TC,A,G,CT,CG,G,CG,GA,A,Null,T,GA,T,A,T,A,CT,A,G,C,A,A,G,C,TC,C,A,TC,TC,CA\r
TY9,GA,C,CA,TC,GA,T,CG,CA,G,C,GT,C,TC,G,TC,A,G,G,G,GT,AT,C,G,G,TC,T,C,C,CA,CG,CT,CG,AG,AG,A,CA,AG,T,CA,A,A,CT,CA,CT,A,GC,CT,GA,GA,G,C,TC,CT,T,G,TC,GA\r
XK11,CA,T,A,TC,GA,T,A,C,GT,TC,G,G,CA,AG,T,A,CA,A,G,A,GT,Null,G,GT,C,CT,CA,CA,CA,CG,T,GT,AG,CG,G,CA,AG,T,GC,T,GA,CT,CA,CT,A,TC,C,G,C,GT,T,T,T,T,GT,T,A\r
XK12,CA,TC,C,TC,GA,T,Null,C,T,C,GT,G,CA,T,TC,AG,CA,GA,GT,G,GT,Null,G,GT,GT,CT,C,CA,A,Null,CT,CG,AG,CA,GA,CA,AG,CT,C,AT,GA,T,A,T,A,GC,C,A,GA,TA,TC,TC,CT,TA,GC,TC,CA\r
XK13,A,TC,CA,T,GA,AT,A,CA,T,CA,GC,CG,TC,A,C,AG,G,GA,GT,GT,GT,Null,Null,GT,TC,CT,C,C,C,CG,CT,CG,AG,CG,G,C,AG,CG,CA,GT,A,T,CA,T,GA,TC,CT,G,G,T,C,C,C,A,G,T,CA\r
XK14,C,T,CA,TC,GA,T,C,CA,GT,TC,TC,G,C,AT,TC,G,C,A,T,AG,T,C,C,GT,C,CT,C,CA,CA,Null,AT,T,AG,CG,GA,C,A,CT,A,AT,A,T,C,CT,CA,C,T,GA,CA,G,T,T,CT,TA,GT,TC,A\r
XK15,C,TC,A,TC,A,A,A,CA,G,TA,GT,CG,CA,T,TC,A,Null,A,T,GT,T,CA,GC,T,GC,CT,CA,CA,CA,C,CT,GT,AG,CG,GA,TA,G,T,CA,GT,A,CT,A,CT,GA,C,CT,A,GA,T,C,T,CT,A,G,TC,A\r
XK16,GC,C,CA,C,A,T,A,CA,GT,C,GT,CG,TC,AG,C,A,C,G,T,GT,T,Null,GC,GT,T,Null,CA,A,A,C,CA,CT,AG,G,A,C,G,CT,GA,AT,G,CT,A,T,CA,G,CT,G,G,G,C,TC,T,TA,G,TC,GC\r
XK17,A,T,A,C,GA,AT,C,CA,T,C,TC,CG,C,AT,C,G,A,A,G,GT,AT,CA,C,T,T,CT,CA,C,CA,G,T,CT,AG,G,GA,A,AG,T,CA,GT,G,CT,A,CT,CA,TC,T,GA,G,T,C,TC,C,TA,GC,T,G\r
XK6,CA,T,C,C,A,T,AG,CA,GT,TC,TC,CG,CA,AG,C,AG,AG,GA,GT,GT,GT,CA,C,GT,T,T,A,A,CA,CG,CA,CT,G,G,G,CA,AG,T,CA,GT,A,C,CA,T,G,GT,CT,GA,GC,G,TC,TC,C,T,TC,TC,C\r
YH,C,TC,CA,C,GA,AT,CA,CA,GT,CA,G,C,A,G,T,G,CA,A,GT,AG,A,CA,G,T,T,CT,CA,TA,Null,C,T,GT,A,CG,GA,C,AG,C,CA,AG,A,CT,A,C,GA,C,CT,G,CA,T,TC,T,CT,A,GT,T,CA\r