| blob | 0174a9d775f55116bc4ee43c1657cf511981e6ed |
1 chr pos_start pos_end shared_num/methy_in_normal/methy_in_tumor/pos_num tumor_methy_num/tumor_NONE_methy_num tumor_methy_ratio normal_methy_num/normal_NONE_methy_num normal_methy_ratio chisq.test_p-value t.test_p-value PlotColor
2 chr1 8716155 8716295 5/5/5/5 148/22 0.87 100/1 0.99 6.42e-04 5.64e-03 magenta
3 chr1 145075789 145075801 4/5/4/5 12/86 0.12 0/64 0.00 3.62e-03 1.28e-03 magenta
4 chr1 152080120 152080180 6/6/6/6 36/106 0.25 4/70 0.05 3.42e-04 1.06e-02 magenta
5 chr1 152082034 152082109 6/6/6/6 70/296 0.19 6/110 0.05 3.26e-04 2.42e-03 magenta
6 chr1 152082179 152082385 9/10/9/10 103/390 0.21 6/122 0.05 1.75e-05 6.73e-06 magenta
7 chr1 155240647 155240713 2/7/2/7 109/1 0.99 14/12 0.54 1.71e-12 9.89e-05 magenta
8 chr1 203045488 203045603 3/5/3/5 13/55 0.19 0/39 0.00 3.58e-03 4.22e-04 magenta
9 chr1 212799889 212799949 3/3/5/5 31/7 0.82 54/0 1.00 1.03e-03 2.77e-02 magenta
10 chr2 1657519 1657698 2/5/2/5 86/14 0.86 27/14 0.66 6.47e-03 2.65e-03 magenta
11 chr2 85553766 85553841 5/5/5/5 4/124 0.03 11/66 0.14 2.96e-03 5.70e-04 magenta
12 chr2 130910328 130910588 0/4/1/5 47/1 0.98 7/3 0.70 1.53e-03 4.65e-03 magenta
13 chr2 192701419 192701603 2/3/4/5 18/56 0.24 56/23 0.71 8.44e-09 4.37e-02 magenta
14 chr2 198570849 198571034 0/4/1/5 0/58 0.00 4/7 0.36 2.23e-06 1.62e-12 magenta
15 chr3 4358117 4358204 3/5/3/5 135/0 1.00 49/6 0.89 9.63e-05 1.92e-02 magenta
16 chr3 46009411 46009574 1/5/1/5 72/3 0.96 9/4 0.69 9.91e-04 8.70e-04 magenta
17 chr3 149374968 149375058 3/6/3/6 7/118 0.06 9/23 0.28 1.71e-04 8.73e-03 magenta
18 chr3 160149560 160149761 2/7/2/7 130/2 0.98 20/6 0.77 4.57e-06 4.86e-04 magenta
19 chr3 195453126 195453405 0/3/3/6 17/27 0.39 30/8 0.79 2.33e-04 1.22e-03 magenta
20 chr5 140249069 140249139 7/8/7/8 14/121 0.10 39/62 0.39 2.68e-07 4.11e-03 magenta
21 chr5 140249069 140249139 7/8/7/8 14/121 0.10 39/62 0.39 2.68e-07 4.11e-03 magenta
22 chr5 140735246 140735359 3/5/3/5 55/73 0.43 7/45 0.13 1.59e-04 3.12e-02 magenta
23 chr5 140735246 140735359 3/5/3/5 55/73 0.43 7/45 0.13 1.59e-04 3.12e-02 magenta
24 chr5 140740725 140740814 5/5/5/5 76/48 0.61 27/51 0.35 2.22e-04 9.94e-04 magenta
25 chr5 140740725 140740814 5/5/5/5 76/48 0.61 27/51 0.35 2.22e-04 9.94e-04 magenta
26 chr5 140810519 140810569 3/3/6/6 1/30 0.03 35/75 0.32 1.26e-03 1.33e-02 magenta
27 chr5 140810519 140810569 3/3/6/6 1/30 0.03 35/75 0.32 1.26e-03 1.33e-02 magenta
28 chr6 10529935 10530035 6/6/6/6 37/100 0.27 61/69 0.47 7.39e-04 1.55e-02 magenta
29 chr6 25727239 25727363 0/4/1/5 91/2 0.98 6/4 0.60 1.20e-06 5.14e-04 magenta
30 chr6 29408118 29408313 0/1/4/5 6/6 0.50 50/8 0.86 4.31e-03 4.43e-02 magenta
31 chr6 151670473 151670585 2/5/2/5 83/16 0.84 13/9 0.59 9.51e-03 5.96e-03 magenta
32 chr6 161045144 161045266 5/5/5/5 192/27 0.88 106/32 0.77 7.14e-03 2.52e-02 magenta
33 chr7 100643876 100644089 5/5/5/5 334/57 0.85 175/68 0.72 3.71e-05 9.55e-03 magenta
34 chr7 100647250 100647366 2/5/2/5 180/13 0.93 27/7 0.79 8.60e-03 4.44e-02 magenta
35 chr7 134632499 134632548 5/5/5/5 95/21 0.82 83/5 0.94 8.42e-03 2.68e-02 magenta
36 chr7 150174585 150174659 5/5/5/5 141/2 0.99 62/9 0.87 4.35e-04 1.47e-03 magenta
37 chr8 10467164 10467285 2/2/5/5 6/14 0.30 48/8 0.86 2.41e-06 4.92e-03 magenta
38 chr8 52384788 52384981 1/5/1/5 88/7 0.93 24/12 0.67 1.65e-04 8.15e-03 magenta
39 chr8 77617450 77617507 2/5/2/5 80/8 0.91 11/11 0.50 5.62e-06 7.12e-03 magenta
40 chr8 86574405 86574621 1/5/1/5 71/3 0.96 8/3 0.73 5.03e-03 1.16e-02 magenta
41 chr8 97156922 97156997 3/4/5/6 0/49 0.00 11/43 0.20 8.29e-04 2.13e-02 magenta
42 chr8 125463641 125463700 4/6/4/6 14/74 0.16 0/65 0.00 7.41e-04 5.89e-04 magenta
43 chr9 32541935 32542136 5/6/5/6 200/12 0.94 59/15 0.80 2.15e-04 2.74e-02 magenta
44 chr9 78803507 78803578 1/5/1/5 93/1 0.99 6/6 0.50 1.29e-10 2.82e-05 magenta
45 chr9 130207299 130207443 0/5/2/7 68/0 1.00 26/5 0.84 6.77e-04 3.11e-06 magenta
46 chr9 140036503 140036592 1/6/1/6 103/7 0.94 8/7 0.53 3.43e-06 2.38e-03 magenta
47 chr10 13534679 13534910 1/4/3/6 62/1 0.98 44/13 0.77 2.99e-04 1.56e-02 magenta
48 chr10 13708110 13708258 1/5/1/5 53/4 0.93 7/4 0.64 5.68e-03 9.28e-03 magenta
49 chr10 127451981 127452032 4/5/4/5 102/2 0.98 65/10 0.87 2.60e-03 2.04e-02 magenta
50 chr10 135102412 135102475 1/6/1/6 109/6 0.95 8/5 0.62 5.04e-05 9.71e-05 magenta
51 chr11 6291536 6291657 1/6/1/6 96/2 0.98 6/8 0.43 1.35e-11 6.05e-06 magenta
52 chr11 19077748 19077805 1/5/1/5 134/11 0.92 2/8 0.20 1.44e-11 1.17e-04 magenta
53 chr11 46564148 46564499 0/4/1/5 55/0 1.00 14/2 0.88 7.82e-03 1.62e-12 magenta
54 chr11 57076923 57077357 1/9/1/9 190/6 0.97 5/6 0.45 1.16e-12 7.90e-07 magenta
55 chr11 119155758 119156022 2/7/2/7 113/4 0.97 23/5 0.82 4.45e-03 3.31e-03 magenta
56 chr11 129800918 129800970 0/4/1/5 0/42 0.00 5/14 0.26 5.21e-04 1.62e-12 magenta
57 chr12 6730359 6730599 0/3/2/5 36/2 0.95 12/9 0.57 3.85e-04 1.17e-02 magenta
58 chr12 43944882 43944968 0/6/1/7 5/97 0.05 12/3 0.80 1.30e-14 2.69e-05 magenta
59 chr12 57872958 57873026 2/5/2/5 16/46 0.26 18/9 0.67 2.65e-04 3.37e-03 magenta
60 chr12 109095012 109095095 3/6/3/6 64/41 0.61 45/2 0.96 1.08e-05 1.12e-02 magenta
61 chr12 113901324 113901477 0/4/1/5 0/42 0.00 2/9 0.18 4.85e-03 1.62e-12 magenta
62 chr12 123201016 123201097 1/5/1/5 120/8 0.94 8/6 0.57 1.29e-05 3.18e-02 magenta
63 chr14 21863137 21863209 2/5/2/5 139/2 0.99 28/7 0.80 7.94e-06 2.67e-02 magenta
64 chr16 4934053 4934119 1/1/5/5 10/2 0.83 51/0 1.00 3.05e-03 0.00e+00 magenta
65 chr16 4935792 4935936 2/6/2/6 134/1 0.99 23/3 0.88 1.20e-03 2.27e-03 magenta
66 chr16 27506706 27506798 3/5/3/5 79/0 1.00 33/4 0.89 2.94e-03 4.85e-02 magenta
67 chr16 69148573 69148694 3/5/3/5 59/23 0.72 13/26 0.33 5.25e-05 2.69e-02 magenta
68 chr16 70954765 70954809 0/4/1/5 42/4 0.91 6/5 0.55 2.67e-03 8.38e-03 magenta
69 chr16 72827230 72827530 3/4/5/6 90/2 0.98 66/20 0.77 1.95e-05 1.30e-02 magenta
70 chr16 74908315 74908542 1/5/1/5 58/13 0.82 3/13 0.19 6.75e-07 2.56e-02 magenta
71 chr17 1631810 1631970 2/5/2/5 44/16 0.73 21/0 1.00 8.25e-03 2.69e-02 magenta
72 chr17 1631810 1631970 2/5/2/5 44/16 0.73 21/0 1.00 8.25e-03 2.69e-02 magenta
73 chr17 7369845 7369987 3/5/3/5 64/34 0.65 14/27 0.34 7.36e-04 1.31e-02 magenta
74 chr17 20355170 20355310 3/5/3/5 89/2 0.98 31/5 0.86 9.27e-03 1.36e-02 magenta
75 chr17 34257111 34257313 2/2/5/5 1/39 0.03 30/58 0.34 1.10e-04 4.51e-02 magenta
76 chr17 34257111 34257313 2/2/5/5 1/39 0.03 30/58 0.34 1.10e-04 4.51e-02 magenta
77 chr17 34257111 34257313 2/2/5/5 1/39 0.03 30/58 0.34 1.10e-04 4.51e-02 magenta
78 chr17 34257111 34257313 2/2/5/5 1/39 0.03 30/58 0.34 1.10e-04 4.51e-02 magenta
79 chr17 34257111 34257313 2/2/5/5 1/39 0.03 30/58 0.34 1.10e-04 4.51e-02 magenta
80 chr17 40714862 40715048 2/6/2/6 5/72 0.06 20/4 0.83 2.62e-14 7.74e-04 magenta
81 chr17 40714862 40715048 2/6/2/6 5/72 0.06 20/4 0.83 2.62e-14 7.74e-04 magenta
82 chr17 43333148 43333266 1/5/1/5 65/0 1.00 8/3 0.73 1.74e-05 0.00e+00 magenta
83 chr17 62079106 62079310 0/2/3/5 21/2 0.91 18/21 0.46 3.78e-04 7.79e-03 magenta
84 chr17 79575778 79575869 0/4/1/5 68/0 1.00 11/2 0.85 1.06e-03 1.62e-12 magenta
85 chr17 80789488 80789560 1/4/2/5 52/0 1.00 19/4 0.83 2.00e-03 1.50e-06 magenta
86 chr18 3457695 3457897 0/4/1/5 51/0 1.00 9/11 0.45 8.35e-09 1.62e-12 magenta
87 chr18 7012054 7012103 1/4/2/5 40/1 0.98 18/9 0.67 4.32e-04 8.04e-04 magenta
88 chr18 14748560 14748696 2/5/2/5 40/28 0.59 5/16 0.24 5.03e-03 2.19e-02 magenta
89 chr18 19757022 19757337 0/1/4/5 13/1 0.93 0/49 0.00 3.48e-14 1.62e-12 magenta
90 chr18 31324490 31324765 3/5/3/5 91/6 0.94 31/12 0.72 3.97e-04 4.19e-03 magenta
91 chr18 44548801 44548840 1/5/1/5 92/4 0.96 7/3 0.70 1.75e-03 1.96e-03 magenta
92 chr18 44548801 44548840 1/5/1/5 92/4 0.96 7/3 0.70 1.75e-03 1.96e-03 magenta
93 chr18 44549347 44549452 2/2/5/5 28/16 0.64 58/2 0.97 1.09e-05 1.07e-04 magenta
94 chr18 44549347 44549452 2/2/5/5 28/16 0.64 58/2 0.97 1.09e-05 1.07e-04 magenta
95 chr19 7267670 7267733 5/5/5/5 96/15 0.86 64/0 1.00 2.10e-03 3.74e-02 magenta
96 chr19 36336300 36336327 6/6/6/6 9/151 0.06 18/90 0.17 3.22e-03 5.91e-03 magenta
97 chr19 49001328 49001497 5/6/5/6 121/11 0.92 39/21 0.65 4.31e-06 9.91e-04 magenta
98 chr19 49001508 49001678 3/6/3/6 89/33 0.73 17/21 0.45 1.32e-03 6.39e-04 magenta
99 chr20 4850671 4850940 1/6/1/6 78/5 0.94 2/12 0.14 4.02e-13 1.76e-05 magenta
100 chr20 10030288 10030446 1/5/1/5 97/4 0.96 11/4 0.73 1.20e-03 7.60e-03 magenta
101 chr20 10030540 10030572 5/5/5/5 74/9 0.89 60/0 1.00 8.41e-03 2.71e-02 magenta
102 chr20 37356217 37356251 5/5/6/6 14/43 0.25 4/92 0.04 1.53e-04 3.58e-03 magenta
103 chr20 52193045 52193232 1/5/1/5 89/3 0.97 13/5 0.72 2.49e-04 3.50e-03 magenta
104 chr20 62152666 62152759 0/1/4/5 6/5 0.55 0/56 0.00 6.95e-09 1.62e-12 magenta
105 chr21 43547809 43547923 1/7/1/7 110/15 0.88 3/7 0.30 1.77e-06 5.15e-03 magenta
106 chr22 39418982 39419223 0/4/2/6 65/2 0.97 28/7 0.80 4.02e-03 3.13e-03 magenta
107 chr22 43465746 43466033 0/4/1/5 74/0 1.00 12/5 0.71 1.59e-06 1.62e-12 magenta