repo.or.cz
/
GalaxyCodeBases.git
/
tree
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
log
|
graphiclog1
|
graphiclog2
|
commit
|
commitdiff
|
tree
|
refs
|
edit
|
fork
history
|
HEAD
|
snapshot (
tar.gz
zip
)
modified: nfig1.py
[GalaxyCodeBases.git]
/
BGI
/
BASE
/
src
/
2bwt
/
tree
c051c9ebac814d4a9594c01854cf4cb4f1bf531c
drwxr-xr-x
..
-rw-r--r--
26171
2BWT-Builder.c
blob
|
blame
|
history
|
raw
-rw-r--r--
16847
2BWT-Interface.c
blob
|
blame
|
history
|
raw
-rw-r--r--
16315
2BWT-Interface.h
blob
|
blame
|
history
|
raw
-rw-r--r--
8060
2BWT-Sample.c
blob
|
blame
|
history
|
raw
-rw-r--r--
18969
AsiicBWT2BWT.c
blob
|
blame
|
history
|
raw
-rw-r--r--
298460
BWT.c
blob
|
blame
|
history
|
raw
-rw-r--r--
21285
BWT.h
blob
|
blame
|
history
|
raw
-rw-r--r--
92681
BWTConstruct.c
blob
|
blame
|
history
|
raw
-rw-r--r--
4858
BWTConstruct.h
blob
|
blame
|
history
|
raw
-rw-r--r--
17376
BWTLoad.c
blob
|
blame
|
history
|
raw
-rw-r--r--
2051
BWTLoad.h
blob
|
blame
|
history
|
raw
-rw-r--r--
26979
BlastCompare.c
blob
|
blame
|
history
|
raw
-rw-r--r--
5342
CacheTest.c
blob
|
blame
|
history
|
raw
-rw-r--r--
40121
DNACount.c
blob
|
blame
|
history
|
raw
-rw-r--r--
5909
DNACount.h
blob
|
blame
|
history
|
raw
-rw-r--r--
3322
FASTAToText.c
blob
|
blame
|
history
|
raw
-rw-r--r--
198351
HSP.c
blob
|
blame
|
history
|
raw
-rw-r--r--
18755
HSP.h
blob
|
blame
|
history
|
raw
-rw-r--r--
12210
HSPstatistic.c
blob
|
blame
|
history
|
raw
-rw-r--r--
2522
HSPstatistic.h
blob
|
blame
|
history
|
raw
-rw-r--r--
6909
Makefile
blob
|
blame
|
history
|
raw
-rw-r--r--
31643
MemManager.c
blob
|
blame
|
history
|
raw
-rw-r--r--
6740
MemManager.h
blob
|
blame
|
history
|
raw
-rw-r--r--
76372
MiscUtilities.c
blob
|
blame
|
history
|
raw
-rw-r--r--
4674
MiscUtilities.h
blob
|
blame
|
history
|
raw
-rw-r--r--
14368
QSufSort.c
blob
|
blame
|
history
|
raw
-rw-r--r--
1696
QSufSort.h
blob
|
blame
|
history
|
raw
-rw-r--r--
22650
SSETest.c
blob
|
blame
|
history
|
raw
-rw-r--r--
37390
SearchBWT.c
blob
|
blame
|
history
|
raw
-rw-r--r--
8369
Socket.c
blob
|
blame
|
history
|
raw
-rw-r--r--
1939
Socket.h
blob
|
blame
|
history
|
raw
-rw-r--r--
27002
TextConverter.c
blob
|
blame
|
history
|
raw
-rw-r--r--
6441
TextConverter.h
blob
|
blame
|
history
|
raw
-rw-r--r--
3812
Timing.c
blob
|
blame
|
history
|
raw
-rw-r--r--
1384
Timing.h
blob
|
blame
|
history
|
raw
-rw-r--r--
2277
TypeNLimit.h
blob
|
blame
|
history
|
raw
drwxr-xr-x
-
b40c
tree
|
history
-rw-r--r--
11310
blast_dust.c
blob
|
blame
|
history
|
raw
-rw-r--r--
2573
blast_dust.h
blob
|
blame
|
history
|
raw
-rw-r--r--
15809
dictionary.c
blob
|
blame
|
history
|
raw
-rw-r--r--
10030
dictionary.h
blob
|
blame
|
history
|
raw
-rw-r--r--
23587
iniparser.c
blob
|
blame
|
history
|
raw
-rw-r--r--
14393
iniparser.h
blob
|
blame
|
history
|
raw
-rw-r--r--
6313
inistrlib.c
blob
|
blame
|
history
|
raw
-rw-r--r--
4645
inistrlib.h
blob
|
blame
|
history
|
raw
-rw-r--r--
18142
karlin.c
blob
|
blame
|
history
|
raw
-rw-r--r--
1666
karlin.h
blob
|
blame
|
history
|
raw
-rw-r--r--
2309
lv2_cpu_sort.h
blob
|
blame
|
history
|
raw
-rw-r--r--
4054
lv2_gpu_sort.cu
blob
|
blame
|
history
|
raw
-rw-r--r--
1258
lv2_gpu_sort.h
blob
|
blame
|
history
|
raw
-rw-r--r--
1425
misc.h
blob
|
blame
|
history
|
raw
-rw-r--r--
4524
overlap-api.c
blob
|
blame
|
history
|
raw
-rw-r--r--
2070
overlap-api.h
blob
|
blame
|
history
|
raw
-rw-r--r--
502
printSortedSuffix.cpp
blob
|
blame
|
history
|
raw
-rw-r--r--
2858
r250.c
blob
|
blame
|
history
|
raw
-rw-r--r--
486
r250.h
blob
|
blame
|
history
|
raw
-rw-r--r--
84747
readbwt.cpp
blob
|
blame
|
history
|
raw