Formula/b/biosig.rb

   1 class Biosig < Formula
   2   desc "Tools for biomedical signal processing and data conversion"
   3   homepage "https://biosig.sourceforge.net/"
   4   url "https://downloads.sourceforge.net/project/biosig/BioSig%20for%20C_C%2B%2B/src/biosig-2.6.1.src.tar.xz"
   5   sha256 "558ee17cd7b4aa1547e98e52bb85cccccb7f7a81600f9bef3a50cd5b34d0729e"
   6   license "GPL-3.0-or-later"
   7   revision 1
   8
   9   livecheck do
  10     url :stable
  11     regex(%r{url=.*?/(?:biosig|biosig4c[^-]*?)[._-]v?(\d+(?:\.\d+)+)\.src\.t}i)
  12   end
  13
  14   bottle do
  15     sha256 cellar: :any,                 arm64_sequoia: "117069306a551af329ca174824f8e68f8ecbfc9285ef33a0b9457137dafd1ca9"
  16     sha256 cellar: :any,                 arm64_sonoma:  "2afa576649a1ce599abd86cf16c92e8137e1fd5513401c0f91635c679f23732a"
  17     sha256 cellar: :any,                 arm64_ventura: "ec0026a9de7bed96c71de9d1e086134cb1f308582cd41f70457cc4fcd01b941b"
  18     sha256 cellar: :any,                 sonoma:        "3004a0bb2aa939134d7823a4db2355ea83f4fd9866870a6b9bbf1686e85a31e0"
  19     sha256 cellar: :any,                 ventura:       "3615427d4eaba6e8322770bdce3d29033bd8361a5613d682033e1477c4ce416c"
  20     sha256 cellar: :any_skip_relocation, x86_64_linux:  "e74145def1020e92731a83f67b2a805ecd74871cfe4936c425fa95a5de396cfe"
  21   end
  22
  23   depends_on "gawk" => :build
  24   depends_on "libb64" => :build
  25   depends_on "dcmtk"
  26   depends_on "suite-sparse"
  27
  28   # Work around build failure when using BSD iconv (e.g. macOS Sonoma) as
  29   # current preprocessor condition only checks for glibc and GNU variants.
  30   # TODO: Report issue upstream
  31   patch :DATA
  32
  33   def install
  34     ENV.append "CXX", "-std=gnu++17"
  35
  36     # Fix compile with newer Clang
  37     ENV.append_to_cflags "-Wno-implicit-function-declaration" if DevelopmentTools.clang_build_version >= 1403
  38
  39     system "./configure", "--disable-silent-rules", *std_configure_args
  40     system "make"
  41     ENV.deparallelize if OS.mac? && MacOS.version >= :sonoma
  42     system "make", "install"
  43   end
  44
  45   test do
  46     assert_match "usage: save2gdf [OPTIONS] SOURCE DEST", shell_output("#{bin}/save2gdf -h").strip
  47     assert_match "mV\t4274\t0x10b2\t0.001\tV", shell_output("#{bin}/physicalunits mV").strip
  48     assert_match "biosig_fhir provides fhir binary template for biosignal data",
  49                  shell_output("#{bin}/biosig_fhir 2>&1").strip
  50   end
  51 end
  52
  53 __END__
  54 diff --git a/biosig4c++/XMLParser/tinyxml.cpp b/biosig4c++/XMLParser/tinyxml.cpp
  55 index e7f0d80..8667268 100644
  56 --- a/biosig4c++/XMLParser/tinyxml.cpp
  57 +++ b/biosig4c++/XMLParser/tinyxml.cpp
  58 @@ -1120,7 +1120,7 @@ bool TiXmlDocument::LoadFile( FILE* file, TiXmlEncoding encoding )
  59         }
  60
  61
  62 -#if defined(_ICONV_H) || defined (_LIBICONV_H)
  63 +#if defined(_ICONV_H) || defined (_LIBICONV_H) || defined(_ICONV_H_)
  64         // convert utf-16 to utf-8 if needed
  65
  66         const char XML_UTF16LE[] = "\xff\xfe<\0?\0x\0m\0l\0 \0v\0e\0r\0s\0i\0o\0n\0=\0\"\0001\0.\0000\0\"\0 \0e\0n\0c\0o\0d\0i\0n\0g\0=\0\"\0U\0T\0F\0-\0001\0006\0\"\0?\0>\0";
  67 diff --git a/biosig4c++/t210/sopen_axg_read.c b/biosig4c++/t210/sopen_axg_read.c
  68 index 41796b7..34c84a6 100644
  69 --- a/biosig4c++/t210/sopen_axg_read.c
  70 +++ b/biosig4c++/t210/sopen_axg_read.c
  71 @@ -394,7 +394,7 @@ if (VERBOSE_LEVEL > 7) fprintf(stdout,"%s (line %i) NS=%i nCol=%i\n", __FILE__,
  72                                 size_t inlen      = beu32p((uint8_t*)(ValLabel[ns])-4);
  73                                 char *outbuf      = hc->Label;
  74                                 size_t outlen     = MAX_LENGTH_LABEL+1;
  75 -#if  defined(_ICONV_H) || defined (_LIBICONV_H)
  76 +#if  defined(_ICONV_H) || defined (_LIBICONV_H) || defined(_ICONV_H_)
  77                                 iconv_t ICONV = iconv_open("UTF-8","UCS-2BE");
  78                                 size_t reticonv = iconv(ICONV, &inbuf, &inlen, &outbuf, &outlen);
  79                                 iconv_close(ICONV);
  80 diff --git a/biosig4c++/t210/sopen_scp_read.c b/biosig4c++/t210/sopen_scp_read.c
  81 index 0ffb490..e377fd6 100644
  82 --- a/biosig4c++/t210/sopen_scp_read.c
  83 +++ b/biosig4c++/t210/sopen_scp_read.c
  84 @@ -365,7 +365,7 @@ int decode_scp_text(HDRTYPE *hdr, size_t inbytesleft, char *input, size_t outbyt
  85                 return(exitcode);
  86         }
  87
  88 -#if  defined(_ICONV_H) || defined (_LIBICONV_H)
  89 +#if  defined(_ICONV_H) || defined (_LIBICONV_H) || defined(_ICONV_H_)
  90  /*
  91         decode_scp_text converts SCP text strings into UTF-8 strings
  92         The table of language support code as defined in