repo.or.cz
/
MACS.git
/
tree
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
log
|
graphiclog1
|
graphiclog2
|
commit
|
commitdiff
|
tree
|
refs
|
edit
|
fork
history
|
HEAD
|
snapshot (
tar.gz
zip
)
implement PETrackII for fragment files from scATAC experiments
[MACS.git]
/
MACS3
/
Signal
/
tree
8c57be89089f0ac5062e4825e3e4e3195fba6b17
drwxr-xr-x
..
-rw-r--r--
53895
BedGraph.py
blob
|
blame
|
history
|
raw
-rw-r--r--
76285
CallPeakUnit.pyx
blob
|
blame
|
history
|
raw
-rw-r--r--
23794
FixWidthTrack.py
blob
|
blame
|
history
|
raw
-rw-r--r--
11323
HMMR_EM.py
blob
|
blame
|
history
|
raw
-rw-r--r--
5656
HMMR_HMM.py
blob
|
blame
|
history
|
raw
-rw-r--r--
9427
HMMR_Signal_Processing.py
blob
|
blame
|
history
|
raw
-rw-r--r--
36537
PairedEndTrack.py
blob
|
blame
|
history
|
raw
-rw-r--r--
17522
PeakDetect.pyx
blob
|
blame
|
history
|
raw
-rw-r--r--
16818
PeakModel.pyx
blob
|
blame
|
history
|
raw
-rw-r--r--
12744
PeakVariants.pyx
blob
|
blame
|
history
|
raw
-rw-r--r--
24826
Pileup.py
blob
|
blame
|
history
|
raw
-rw-r--r--
10315
PileupV2.py
blob
|
blame
|
history
|
raw
-rw-r--r--
27685
PosReadsInfo.pyx
blob
|
blame
|
history
|
raw
-rw-r--r--
26157
Prob.py
blob
|
blame
|
history
|
raw
-rw-r--r--
35761
RACollection.pyx
blob
|
blame
|
history
|
raw
-rw-r--r--
19506
ReadAlignment.pyx
blob
|
blame
|
history
|
raw
-rw-r--r--
13790
Region.py
blob
|
blame
|
history
|
raw
-rw-r--r--
59792
ScoreTrack.pyx
blob
|
blame
|
history
|
raw
-rw-r--r--
13277
SignalProcessing.pyx
blob
|
blame
|
history
|
raw
-rw-r--r--
12281
UnitigRACollection.pyx
blob
|
blame
|
history
|
raw
-rw-r--r--
13764
VariantStat.pyx
blob
|
blame
|
history
|
raw
-rw-r--r--
0
__init__.py
blob
|
blame
|
history
|
raw
-rw-r--r--
13930
cPosValCalculation.c
blob
|
blame
|
history
|
raw
-rw-r--r--
1786
cPosValCalculation.h
blob
|
blame
|
history
|
raw
-rw-r--r--
1248
cPosValCalculation.pxd
blob
|
blame
|
history
|
raw
-rw-r--r--
9826
swalign.c
blob
|
blame
|
history
|
raw
-rw-r--r--
2358
swalign.h
blob
|
blame
|
history
|
raw