pkgs/development/python-modules/biopython/close_parser_on_time.patch

   1 diff --git a/Bio/SeqIO/SeqXmlIO.py b/Bio/SeqIO/SeqXmlIO.py
   2 index 8fe75ebb728..6758317d05f 100644
   3 --- a/Bio/SeqIO/SeqXmlIO.py
   4 +++ b/Bio/SeqIO/SeqXmlIO.py
   5 @@ -498,11 +498,12 @@ def iterate(self, handle):
   6              if not text:
   7                  break
   8              parser.feed(text)
   9 +        # Closing the parser ensures that all XML data fed into it are processed
  10 +        parser.close()
  11          # We have reached the end of the XML file;
  12          # send out the remaining records
  13          yield from records
  14          records.clear()
  15 -        parser.close()
  16
  17
  18  class SeqXmlWriter(SequenceWriter):