pkgs/development/python-modules/pims/default.nix

   1 {
   2   lib,
   3   buildPythonPackage,
   4   fetchFromGitHub,
   5   imageio,
   6   numpy,
   7   pytestCheckHook,
   8   pythonOlder,
   9   scikit-image,
  10   slicerator,
  11 }:
  12
  13 buildPythonPackage rec {
  14   pname = "pims";
  15   version = "0.7";
  16   format = "setuptools";
  17
  18   disabled = pythonOlder "3.7";
  19
  20   src = fetchFromGitHub {
  21     owner = "soft-matter";
  22     repo = pname;
  23     rev = "refs/tags/v${version}";
  24     hash = "sha256-3SBZk11w6eTZFmETMRJaYncxY38CYne1KzoF5oRgzuY=";
  25   };
  26
  27   propagatedBuildInputs = [
  28     slicerator
  29     imageio
  30     numpy
  31   ];
  32
  33   nativeCheckInputs = [
  34     pytestCheckHook
  35     scikit-image
  36   ];
  37
  38   pythonImportsCheck = [ "pims" ];
  39
  40   pytestFlagsArray = [
  41     "-W"
  42     "ignore::Warning"
  43   ];
  44
  45   disabledTests = [
  46     # NotImplementedError: Do not know how to deal with infinite readers
  47     "TestVideo_ImageIO"
  48   ];
  49
  50   disabledTestPaths = [
  51     # AssertionError: Tuples differ: (377, 505, 4) != (384, 512, 4)
  52     "pims/tests/test_display.py"
  53   ];
  54
  55   meta = with lib; {
  56     description = "Module to load video and sequential images in various formats";
  57     homepage = "https://github.com/soft-matter/pims";
  58     changelog = "https://github.com/soft-matter/pims/releases/tag/v${version}";
  59     license = licenses.bsd3;
  60     maintainers = [ ];
  61   };
  62 }