pkgs/development/libraries/science/biology/mirtk/default.nix

   1 { lib, stdenv, gtest, fetchFromGitHub, cmake, boost, eigen, python, vtk, zlib, tbb }:
   2
   3 stdenv.mkDerivation rec {
   4   version = "2.0.0";
   5   pname = "mirtk";
   6
   7   src = fetchFromGitHub {
   8     owner = "BioMedIA";
   9     repo = "MIRTK";
  10     rev = "v${version}";
  11     sha256 = "0i2v97m66ir5myvi5b123r7zcagwy551b73s984gk7lksl5yiqxk";
  12     fetchSubmodules = true;
  13   };
  14
  15   cmakeFlags = [
  16     "-DWITH_VTK=ON"
  17     "-DBUILD_ALL_MODULES=ON"
  18     "-DWITH_TBB=ON"
  19   ];
  20
  21   doCheck = true;
  22
  23   checkPhase = ''
  24     ctest -E '(Polynomial|ConvolutionFunction|Downsampling|EdgeTable|InterpolateExtrapolateImage)'
  25   '';
  26   # testPolynomial - segfaults for some reason
  27   # testConvolutionFunction, testDownsampling - main not called correctly
  28   # testEdgeTable, testInterpolateExtrapolateImageFunction - setup fails
  29
  30   postInstall = ''
  31     install -Dm644 -t "$out/share/bash-completion/completions/mirtk" share/completion/bash/mirtk
  32   '';
  33
  34   nativeBuildInputs = [ cmake gtest ];
  35   buildInputs = [ boost eigen python vtk zlib tbb ];
  36
  37   meta = with lib; {
  38     homepage = "https://github.com/BioMedIA/MIRTK";
  39     description = "Medical image registration library and tools";
  40     maintainers = with maintainers; [ bcdarwin ];
  41     platforms = platforms.linux;
  42     license = licenses.asl20;
  43   };
  44 }