pkgs/development/r-modules/bioc-packages.nix

   1 # This file is generated from generate-r-packages.R. DO NOT EDIT.
   2 # Execute the following command to update the file.
   3 #
   4 # Rscript generate-r-packages.R bioc >new && mv new bioc-packages.nix
   5
   6 { self, derive }:
   7 let derive2 = derive { biocVersion = "3.15"; };
   8 in with self; {
   9   ABSSeq = derive2 { name="ABSSeq"; version="1.50.0"; sha256="1kwl0gcqwbgblwvpbvqlgnsi91km77j11f0q1f0gd6hhnv38mmlv"; depends=[limma locfit]; };
  10   ABarray = derive2 { name="ABarray"; version="1.64.0"; sha256="0kjq00i2mb21xyjjs3jy09ps80f11cy37wywzjvmxyjxzbsk4d7r"; depends=[Biobase multtest]; };
  11   ACE = derive2 { name="ACE"; version="1.14.0"; sha256="1xnw288vz810vjkidar5h218wyc0q2hx0k4zi3r88vaz5rfhc05m"; depends=[Biobase GenomicRanges ggplot2 QDNAseq]; };
  12   ACME = derive2 { name="ACME"; version="2.52.0"; sha256="0ilcsgpc4m47gifxc0yzx2xi3g4day515mncnnjvfdj3iq8xwk25"; depends=[Biobase BiocGenerics]; };
  13   ADAM = derive2 { name="ADAM"; version="1.12.0"; sha256="1cgcjykik9hjrwlvvgaccprcrimgq5kwh9cj6367yk9m574a4gmn"; depends=[dplyr DT GO_db KEGGREST knitr pbapply Rcpp stringr SummarizedExperiment]; };
  14   ADAMgui = derive2 { name="ADAMgui"; version="1.12.0"; sha256="0vvd5qdwkfcr7zg7z63x3vvrcg63r6c9p383yvcg2lp8zmx8hsbs"; depends=[ADAM colorRamps data_table dplyr DT ggplot2 ggpubr ggrepel ggsignif GO_db gridExtra knitr RColorBrewer reshape2 shiny shinyjs stringi stringr testthat varhandle]; };
  15   ADImpute = derive2 { name="ADImpute"; version="1.6.0"; sha256="0885kd8mpmwjpzpx14pi6l3mqcvsixk10vkf5h4sqb7di0nnna4w"; depends=[BiocParallel checkmate data_table DrImpute kernlab MASS Matrix rsvd S4Vectors SAVER SingleCellExperiment SummarizedExperiment]; };
  16   ADaCGH2 = derive2 { name="ADaCGH2"; version="2.36.0"; sha256="0awjxl2lwyh7hkjsx1zqsvrh649s9zn89za1iv8yd9l48ch2zfs5"; depends=[aCGH bit cluster DNAcopy ff GLAD snapCGH tilingArray waveslim]; };
  17   AGDEX = derive2 { name="AGDEX"; version="1.44.0"; sha256="0c44fw5ajdjc13409rn3lsv0jhlqa2qcak9b1k8hpig486xxzsr9"; depends=[Biobase GSEABase]; };
  18   AIMS = derive2 { name="AIMS"; version="1.28.0"; sha256="1z7yzaizyzcv556w8880603nd947k0d6raadjm42mdl66mma0cdx"; depends=[Biobase e1071]; };
  19   ALDEx2 = derive2 { name="ALDEx2"; version="1.28.1"; sha256="0xppx52sllbz4pli174422i4kkf37v0yl844088nbj3j9r6pfbj9"; depends=[BiocParallel GenomicRanges IRanges multtest Rfast S4Vectors SummarizedExperiment zCompositions]; };
  20   AMARETTO = derive2 { name="AMARETTO"; version="1.12.0"; sha256="111dk19b9910icksyr592cvhc5gwvgknr5q4887j9yxbajd7hcmx"; depends=[BiocFileCache callr circlize ComplexHeatmap curatedTCGAData doParallel dplyr DT foreach ggplot2 glmnet gridExtra httr impute knitr limma Matrix matrixStats MultiAssayExperiment Rcpp readr reshape2 rmarkdown tibble]; };
  21   AMOUNTAIN = derive2 { name="AMOUNTAIN"; version="1.22.0"; sha256="0vdfabsrisdd7qq28f5ivd0v8zz49szqn677i5lhwnlaix220c54"; depends=[]; };
  22   ANCOMBC = derive2 { name="ANCOMBC"; version="1.6.4"; sha256="02vip6b6vkzwnwsmdxpmrkd8nb9diq05wvrs0yqvxxnvkj980ppz"; depends=[CVXR DescTools doParallel doRNG dplyr emmeans energy foreach Hmisc lme4 lmerTest magrittr MASS mia nloptr Rdpack rlang rngtools S4Vectors SingleCellExperiment SummarizedExperiment tibble tidyr]; };
  23   ANF = derive2 { name="ANF"; version="1.18.0"; sha256="1fa2pbdapymrpz01ws0m2fbzf11d723x6rbsys29v06is57f5lpj"; depends=[Biobase igraph MASS RColorBrewer survival]; };
  24   APAlyzer = derive2 { name="APAlyzer"; version="1.10.0"; sha256="1xixj6ck1akwc01gv7xsgnnflrkhflsrpq2cbxh5s7z6xj0f8k00"; depends=[DESeq2 dplyr GenomicAlignments GenomicFeatures GenomicRanges ggplot2 ggrepel HybridMTest repmis Rsamtools Rsubread rtracklayer SummarizedExperiment tidyr VariantAnnotation]; };
  25   APL = derive2 { name="APL"; version="1.0.1"; sha256="0v6m5vcj5c1f0f9d8ksyhq58jgqfrjsgg4vf9pmbb36gvf3k81dk"; depends=[ggplot2 ggrepel magrittr org_Hs_eg_db org_Mm_eg_db plotly reticulate rlang Seurat SingleCellExperiment SummarizedExperiment topGO viridisLite]; };
  26   ARRmNormalization = derive2 { name="ARRmNormalization"; version="1.36.0"; sha256="1pnvw8psbql787m8lrmhd9xbmgkc3dbc70yfds1aggv50dk3yjk1"; depends=[ARRmData]; };
  27   ASAFE = derive2 { name="ASAFE"; version="1.22.0"; sha256="1l9iqw2imr6w2gwqrmg05jp6lj2xc7hbyhd144d4q8vw8z7ga4ns"; depends=[]; };
  28   ASEB = derive2 { name="ASEB"; version="1.40.0"; sha256="1i0r4vimk6is4j4rr14ajp8papznpmmr0bhwd96s8w53cqdqph7p"; depends=[]; };
  29   ASGSCA = derive2 { name="ASGSCA"; version="1.30.0"; sha256="0mxrrkm2lg7gxjh8ynn6qmryn8wqda7b83sr51dpgblay83jcbaq"; depends=[MASS Matrix]; };
  30   ASICS = derive2 { name="ASICS"; version="2.12.1"; sha256="1qx0qpwl34bayk3gj6lvc7rsq3wnzkdngz3wyxnsab0r3cmqcbab"; depends=[BiocParallel ggplot2 glmnet gridExtra Matrix mvtnorm PepsNMR plyr quadprog ropls SummarizedExperiment zoo]; };
  31   ASSET = derive2 { name="ASSET"; version="2.14.0"; sha256="029acl5k9d4hnvy3jia9cr4rk6w31zn8b5s79i6lazq1cp236hbg"; depends=[MASS msm rmeta]; };
  32   ASSIGN = derive2 { name="ASSIGN"; version="1.32.0"; sha256="1f1lqip58cvf85nmq8mj7phlk0plcfv1h5ihc0cf2h5y7n4wrm9n"; depends=[ggplot2 gplots msm Rlab sva yaml]; };
  33   ASURAT = derive2 { name="ASURAT"; version="1.0.0"; sha256="160wvlvyc5dddjngmd21s1av292f6nvjkabag9iz8dipivicyi23"; depends=[circlize cluster ComplexHeatmap plot3D Rcpp S4Vectors SingleCellExperiment SummarizedExperiment]; };
  34   ASpediaFI = derive2 { name="ASpediaFI"; version="1.10.0"; sha256="1wn7iwaj92j1qvfp4l93ir4dawd1yczff3qyhh886qw2jcbf0b99"; depends=[BiocParallel biomaRt dplyr DRaWR e1071 fgsea GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 Gviz igraph IRanges IVAS limma Matrix reshape2 ROCR Rsamtools rtracklayer S4Vectors scales SummarizedExperiment]; };
  35   ASpli = derive2 { name="ASpli"; version="2.6.0"; sha256="1frlcwa8m4imfx6ncav8r8yskyaf4ibha177mfnp9y84w6mphynz"; depends=[AnnotationDbi BiocGenerics BiocStyle data_table DT edgeR GenomicAlignments GenomicFeatures GenomicRanges Gviz htmltools igraph IRanges limma MASS pbmcapply Rsamtools S4Vectors tidyr UpSetR]; };
  36   ATACseqQC = derive2 { name="ATACseqQC"; version="1.20.2"; sha256="0jj7n0mcj0gciw0ksazlksgmwzp51a40pwqhf0c7la0cc4bnrkqp"; depends=[BiocGenerics Biostrings BSgenome ChIPpeakAnno edgeR GenomeInfoDb GenomicAlignments GenomicRanges GenomicScores IRanges KernSmooth limma motifStack preseqR randomForest Rsamtools rtracklayer S4Vectors]; };
  37   AUCell = derive2 { name="AUCell"; version="1.18.1"; sha256="17wr7dycll0l1gax4w268qw7is163bs51rj6p1qnx1dgc9ibnsgr"; depends=[BiocGenerics data_table DelayedArray DelayedMatrixStats GSEABase mixtools R_utils shiny SummarizedExperiment]; };
  38   AWFisher = derive2 { name="AWFisher"; version="1.10.0"; sha256="050k7w0azsl7rqx2pxgccihzc2q8pmh6fyy4gib2d42sdyijr2n1"; depends=[edgeR limma]; };
  39   AffiXcan = derive2 { name="AffiXcan"; version="1.14.0"; sha256="0wj9shzmlxpksbxny571xzfcmmqqzjlk1vq4mx1is2r6ma7jkblq"; depends=[BiocParallel crayon MultiAssayExperiment SummarizedExperiment]; };
  40   AffyCompatible = derive2 { name="AffyCompatible"; version="1.56.0"; sha256="0x3lj1jgqq67389rzfklah5p878ns9b4fpdpz455m2gq9sk7qsda"; depends=[Biostrings RCurl XML]; };
  41   AffyRNADegradation = derive2 { name="AffyRNADegradation"; version="1.42.0"; sha256="16akwmpzwxai7ks5bvc1yyb9sx2scv9b9gas5avb0sk5fk0h3nsf"; depends=[affy]; };
  42   AgiMicroRna = derive2 { name="AgiMicroRna"; version="2.46.0"; sha256="0jic89gyphbv7jzlfgm9bh1aq48lp86rq6hr34gsg9z0pa1192xa"; depends=[affy affycoretools Biobase limma preprocessCore]; };
  43   AllelicImbalance = derive2 { name="AllelicImbalance"; version="1.34.0"; sha256="0w4xd0xzkwx7bbhrgqligpahlhg85rginknx520z891r8v0bim2z"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gridExtra Gviz IRanges lattice latticeExtra nlme Rsamtools S4Vectors seqinr SummarizedExperiment VariantAnnotation]; };
  44   AlphaBeta = derive2 { name="AlphaBeta"; version="1.10.0"; sha256="1ikdrigma02gnl6ggrc89bjsiqmd7knpb9kw7nqyrdnv3qjd9iag"; depends=[BiocParallel data_table dplyr expm ggplot2 gtools igraph optimx plotly stringr]; };
  45   AlpsNMR = derive2 { name="AlpsNMR"; version="3.6.1"; sha256="09z2k6mqr837bh422mpy0k71hwsmc4s730f58fq9ya651cjzvdcs"; depends=[baseline BiocParallel dplyr fs future ggplot2 glue htmltools magrittr matrixStats mixOmics pcaPP purrr readxl reshape2 rlang rmarkdown signal speaq stringr tibble tidyr vctrs]; };
  46   AnVIL = derive2 { name="AnVIL"; version="1.8.7"; sha256="16vqqm7p3v92b51ir9kmaa410p57bpqpxr4nvqngz2c8vvkm5l5g"; depends=[BiocManager dplyr futile_logger httr jsonlite rapiclient rlang tibble tidyr tidyselect]; };
  47   AnVILBilling = derive2 { name="AnVILBilling"; version="1.6.0"; sha256="08bc1lsjkgs0hmrfi2fbk5swbi5ckgrv4vhsfkqqywfpnkq9k436"; depends=[bigrquery DBI dplyr DT ggplot2 lubridate magrittr plotly shiny shinytoastr]; };
  48   AnVILPublish = derive2 { name="AnVILPublish"; version="1.6.0"; sha256="1iwvm60lricpsf4nr99wxhni0lwaa4z8aibr7lwj9gdwf2y43c9x"; depends=[AnVIL httr jsonlite readr rmarkdown whisker yaml]; };
  49   Anaquin = derive2 { name="Anaquin"; version="2.20.0"; sha256="1jgpnls2djl1yzvnk64qc83mljmlci7wflwkza3wr0sv6r47b0dd"; depends=[DESeq2 ggplot2 knitr locfit plyr qvalue ROCR]; };
  50   AneuFinder = derive2 { name="AneuFinder"; version="1.24.0"; sha256="1acsp987jv2x4qwbgy3y7ff4r2qz7680b0nbr37m4lmncqfgh8yl"; depends=[AneuFinderData bamsignals BiocGenerics Biostrings cowplot DNAcopy doParallel ecp foreach GenomeInfoDb GenomicAlignments GenomicRanges ggdendro ggplot2 ggrepel IRanges mclust ReorderCluster reshape2 Rsamtools S4Vectors]; };
  51   AnnotationDbi = derive2 { name="AnnotationDbi"; version="1.58.0"; sha256="15cwy7lic89jwl3dr7j4pb5bx457jdpvzvylr71624s0p0j9rgwn"; depends=[Biobase BiocGenerics DBI IRanges KEGGREST RSQLite S4Vectors]; };
  52   AnnotationFilter = derive2 { name="AnnotationFilter"; version="1.20.0"; sha256="082lpcd6yr2nkxndlck2wqqd3nfdx7lnpw8barxgv41q4l7v4ald"; depends=[GenomicRanges lazyeval]; };
  53   AnnotationForge = derive2 { name="AnnotationForge"; version="1.38.1"; sha256="0lcr79a3570h7zg4z691gxg2vlyqnars5811q0clzinbmq7b4x3v"; depends=[AnnotationDbi Biobase BiocGenerics DBI RCurl RSQLite S4Vectors XML]; };
  54   AnnotationHub = derive2 { name="AnnotationHub"; version="3.4.0"; sha256="03dmbx43rsv9xv94lk12gpraq47ryc13jijwma3q05hl9wn8xjxs"; depends=[AnnotationDbi BiocFileCache BiocGenerics BiocManager BiocVersion curl dplyr httr interactiveDisplayBase rappdirs RSQLite S4Vectors yaml]; };
  55   AnnotationHubData = derive2 { name="AnnotationHubData"; version="1.26.1"; sha256="1s104n0dkrncbdihd4jq28ibl0v8fnbaxfkhrv7jmx3wh7j4vnfp"; depends=[AnnotationDbi AnnotationForge AnnotationHub Biobase BiocCheck BiocGenerics BiocManager biocViews Biostrings DBI futile_logger GenomeInfoDb GenomicFeatures GenomicRanges graph IRanges jsonlite OrganismDbi RCurl Rsamtools RSQLite rtracklayer S4Vectors XML]; };
  56   ArrayExpress = derive2 { name="ArrayExpress"; version="1.56.0"; sha256="0v2v7v0gim0bsg34ciplapz6mjih68yqhcgzdlhcyj2d6vrgiad5"; depends=[Biobase limma oligo XML]; };
  57   ArrayExpressHTS = derive2 { name="ArrayExpressHTS"; version="1.46.0"; sha256="1bwgqadqrx2zasyr1dhapmwkapdfdmzl6z7fdlmafmlsfyvqvq68"; depends=[Biobase BiocGenerics biomaRt Biostrings bitops edgeR GenomicRanges Hmisc IRanges R2HTML RColorBrewer Rhtslib rJava Rsamtools sampling sendmailR ShortRead snow svMisc XML]; };
  58   AssessORF = derive2 { name="AssessORF"; version="1.14.0"; sha256="1l87bpny9k3jbzbzmb9h2ijvblrj471gqv26fyzbvb3vr6y406z7"; depends=[Biostrings DECIPHER GenomicRanges IRanges]; };
  59   BAC = derive2 { name="BAC"; version="1.56.0"; sha256="0dkw7438d2sf6nb577dnzija54qs0nhlr47lb73li60fhlnvqmh2"; depends=[]; };
  60   BADER = derive2 { name="BADER"; version="1.34.0"; sha256="0i5x1r2ns1hxhqk5jyfqird81hck1hllvvgx5bn0rb5vl99g8spm"; depends=[]; };
  61   BAGS = derive2 { name="BAGS"; version="2.36.0"; sha256="1c1sdv8199kj2pd1hwnbmbf2a4fb7zkazsjgn8hi9c5sm7mlnc29"; depends=[Biobase breastCancerVDX]; };
  62   BANDITS = derive2 { name="BANDITS"; version="1.12.0"; sha256="1423djb7cij68y0q2dcp8q7lrcn2fxjn6d25v4qy3w00b2w8ppg9"; depends=[BiocParallel data_table doParallel doRNG DRIMSeq foreach ggplot2 MASS R_utils Rcpp RcppArmadillo]; };
  63   BASiCS = derive2 { name="BASiCS"; version="2.8.0"; sha256="06g041xcv2qci2aapj3g4i32xzw508nhvvss9lfn8g2vdhj07inn"; depends=[assertthat Biobase BiocGenerics BiocParallel coda cowplot ggExtra ggplot2 hexbin MASS Matrix matrixStats Rcpp RcppArmadillo reshape2 S4Vectors scran scuttle SingleCellExperiment SummarizedExperiment viridis]; };
  64   BBCAnalyzer = derive2 { name="BBCAnalyzer"; version="1.26.0"; sha256="1m4pwfl920pkhnpdc1qps65nsihn73hzyach1d5dhvx884540lq4"; depends=[Biostrings GenomicRanges IRanges Rsamtools SummarizedExperiment VariantAnnotation]; };
  65   BCRANK = derive2 { name="BCRANK"; version="1.58.0"; sha256="0c1q7vag7jj16wiw0lbvl1b5k8f1wyn9rv0rpnpl4642ab6sps1v"; depends=[Biostrings]; };
  66   BDMMAcorrect = derive2 { name="BDMMAcorrect"; version="1.14.0"; sha256="19b3jm2a5nz7p43sxa0b08zvc1lvjnqd5g052rj98n6knfb403k7"; depends=[ape ellipse ggplot2 Rcpp RcppArmadillo RcppEigen SummarizedExperiment vegan]; };
  67   BEARscc = derive2 { name="BEARscc"; version="1.16.0"; sha256="0vslyhscqw1y519qmbilb1fw0482aplib8kb37pvmhy3ak1mcxqj"; depends=[data_table ggplot2 SingleCellExperiment]; };
  68   BEAT = derive2 { name="BEAT"; version="1.34.0"; sha256="1hgqiy52l34z8zxzvq5j528sy3pf2l5q1mjsccs2nkxalpd31vmg"; depends=[Biostrings BSgenome GenomicRanges ShortRead]; };
  69   BEclear = derive2 { name="BEclear"; version="2.12.1"; sha256="0r8w71zwsrva7734d1a23qbwvd7p380h0i5d2lrdgdq4h5p7kzsm"; depends=[abind BiocParallel data_table dixonTest futile_logger ids Matrix Rcpp Rdpack]; };
  70   BGmix = derive2 { name="BGmix"; version="1.56.0"; sha256="03f6nknp3n49yvg2d9qsmds676rva70pr4wjz0md228jczgjk0vj"; depends=[KernSmooth]; };
  71   BHC = derive2 { name="BHC"; version="1.48.0"; sha256="1kqajd16981y5yaak2imaq1i7pilgqdr3nbhggsakh787j1d9rc5"; depends=[]; };
  72   BLMA = derive2 { name="BLMA"; version="1.20.0"; sha256="1425r1gavszzdfh7zy9gnc20507vjqimadxrm9yi1y1knk5ikas2"; depends=[Biobase graph GSA limma metafor PADOG ROntoTools]; };
  73   BOBaFIT = derive2 { name="BOBaFIT"; version="1.0.1"; sha256="0fvdmcdfyky8471nl6pb3iwrwgm8ydwx2xkh7cr94gmr021ghfcq"; depends=[dplyr GenomicRanges ggbio ggforce ggplot2 magrittr NbClust plyranges stringr tidyr]; };
  74   BPRMeth = derive2 { name="BPRMeth"; version="1.22.0"; sha256="0841wcb5khfi7g358jkrih64fwabwkdf9xydxxlvvvr4xw92pxqj"; depends=[assertthat BiocStyle cowplot data_table doParallel e1071 earth foreach GenomicRanges ggplot2 IRanges kernlab magrittr MASS matrixcalc mvtnorm randomForest Rcpp RcppArmadillo S4Vectors truncnorm]; };
  75   BRAIN = derive2 { name="BRAIN"; version="1.42.0"; sha256="0b2fjhv05lgvgpdfs2p191vv8d7v3h1gfwi29hc5agpk3fg1rzqn"; depends=[Biostrings lattice PolynomF]; };
  76   BRGenomics = derive2 { name="BRGenomics"; version="1.8.0"; sha256="1nyf5qsf5av2s81bbwi43skaggwa5pd59sfidavr1vcizjmc9qd8"; depends=[DESeq2 GenomeInfoDb GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; };
  77   BSgenome = derive2 { name="BSgenome"; version="1.64.0"; sha256="17gqrmaf6xxghgrzcansl9gfw3ghkrqp87swlnwgyghqvflr5qxc"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges IRanges matrixStats Rsamtools rtracklayer S4Vectors XVector]; };
  78   BUMHMM = derive2 { name="BUMHMM"; version="1.20.0"; sha256="1xn4ikvjilr04c68y5is27g9kmxlmlijx3a1jq8vjbzz410ir6g9"; depends=[Biostrings devtools gtools IRanges stringi SummarizedExperiment]; };
  79   BUS = derive2 { name="BUS"; version="1.52.0"; sha256="1w0d79gqk6xb6yhnffka51aiv540j1xknryhr0xznb9q8hf6aymi"; depends=[infotheo minet]; };
  80   BUScorrect = derive2 { name="BUScorrect"; version="1.14.0"; sha256="04c6xl2nbfgvzqi0kqf1g5sp3bf6a1blaqhassja9ara0wbs7i7a"; depends=[gplots SummarizedExperiment]; };
  81   BUSpaRse = derive2 { name="BUSpaRse"; version="1.10.0"; sha256="11rw7r0kdaqbj9iwjbyg107ayzqnrckc6w1g3v13lgdym0c864mr"; depends=[AnnotationDbi AnnotationFilter BH BiocGenerics biomaRt Biostrings BSgenome dplyr ensembldb GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges magrittr Matrix plyranges Rcpp RcppArmadillo RcppProgress S4Vectors stringr tibble tidyr zeallot]; };
  82   BUSseq = derive2 { name="BUSseq"; version="1.2.0"; sha256="1lcw75drcmsrpl5ski1xjhjr8whndp5h8y8hs5vkjqmllrrw0x11"; depends=[gplots S4Vectors SingleCellExperiment SummarizedExperiment]; };
  83   BaalChIP = derive2 { name="BaalChIP"; version="1.22.0"; sha256="02qwk9n2fyg5f9xxjiiha9mi6p9ii3zi5x7w84sh5d5g58s27g6q"; depends=[coda doBy doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges reshape2 Rsamtools scales]; };
  84   BadRegionFinder = derive2 { name="BadRegionFinder"; version="1.24.0"; sha256="1a1pqmh5ak9s3k1lxw6flanchk24zyznwm34ixi2b78wdc3hqgm9"; depends=[biomaRt GenomicRanges Rsamtools S4Vectors VariantAnnotation]; };
  85   BaseSpaceR = derive2 { name="BaseSpaceR"; version="1.40.0"; sha256="0jyw4pnybsd6ywpaamk5ywkrcib2z48farsnszmwq97zlbmra7fj"; depends=[RCurl RJSONIO]; };
  86   Basic4Cseq = derive2 { name="Basic4Cseq"; version="1.32.0"; sha256="14pvjdkgmkbnbmyyp8wfgvs6b1bvy1rhqwg8hc6jclwl8hfyxxxp"; depends=[Biostrings BSgenome_Ecoli_NCBI_20080805 caTools GenomicAlignments GenomicRanges RCircos]; };
  87   BasicSTARRseq = derive2 { name="BasicSTARRseq"; version="1.24.0"; sha256="0qmdiwch808i2k8fcgx8xdrk9j4lzm7x6j9k6n7iac125i1san31"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges S4Vectors]; };
  88   BatchQC = derive2 { name="BatchQC"; version="1.24.0"; sha256="1mhffv9ic52v7jm3bphg2q0spk4fz729yjapiqxl56bira04bagi"; depends=[corpcor ggvis gplots heatmaply knitr limma Matrix matrixStats MCMCpack moments pander reshape2 rmarkdown shiny sva]; };
  89   BayesKnockdown = derive2 { name="BayesKnockdown"; version="1.22.0"; sha256="122vg0lvs3fkgwcvn259rk0m1vaz19pdfvhsj5m1hd3d2h44pv65"; depends=[Biobase]; };
  90   BayesSpace = derive2 { name="BayesSpace"; version="1.6.0"; sha256="0086fw2chymjwxwgzax6lky84kaa34900ca2p90pbjqx14b161vf"; depends=[assertthat BiocFileCache BiocSingular coda DirichletReg ggplot2 Matrix mclust purrr Rcpp RcppArmadillo RcppDist RcppProgress RCurl rhdf5 S4Vectors scales scater scran SingleCellExperiment SummarizedExperiment xgboost]; };
  91   BeadDataPackR = derive2 { name="BeadDataPackR"; version="1.48.0"; sha256="19f0y6drsrsrwysb16xx6mafgiw55fr35pwxkjxn0ks6jc5vx1cx"; depends=[]; };
  92   BgeeCall = derive2 { name="BgeeCall"; version="1.12.2"; sha256="0l6smwy55mm4clb71l4bpch3bayyyf87nq1asbrv6s6fd22mmwil"; depends=[biomaRt Biostrings data_table dplyr GenomicFeatures jsonlite rhdf5 rslurm rtracklayer sjmisc tximport]; };
  93   BgeeDB = derive2 { name="BgeeDB"; version="2.22.3"; sha256="1f6lrazaibbz21sqvj59rq6ps9m1riw2y0kyidbn29mxf4ibwh3k"; depends=[Biobase curl data_table digest dplyr graph R_utils RCurl RSQLite tidyr topGO]; };
  94   BiFET = derive2 { name="BiFET"; version="1.16.0"; sha256="03ypbbn8i0f4bl4m6wfdcv702jydniak56wqjb1vlrckd9aphwzq"; depends=[GenomicRanges poibin]; };
  95   BiGGR = derive2 { name="BiGGR"; version="1.32.0"; sha256="0n57bgl6xz5b1gpw4isimq2pqxmlabn7jzhbjg2fbxcklabdvrcw"; depends=[hyperdraw hypergraph LIM limSolve rsbml stringr]; };
  96   BiRewire = derive2 { name="BiRewire"; version="3.28.0"; sha256="0r3i7n45qgj8wzdsx8wmfk0lc4xbcvxvmfziiqzig7r706q2c2hm"; depends=[igraph Matrix Rtsne slam]; };
  97   BiSeq = derive2 { name="BiSeq"; version="1.36.0"; sha256="1cnsh7cx500a3aaxqc7vn56b9ng2m5m9gxw1bhi84nm1hiig4ff1"; depends=[betareg Biobase BiocGenerics Formula GenomeInfoDb GenomicRanges globaltest IRanges lokern rtracklayer S4Vectors SummarizedExperiment]; };
  98   BicARE = derive2 { name="BicARE"; version="1.54.0"; sha256="0qjh5bsjcjry6k1vzdaascwy2shjrkc2bw0w57w0qa458cbi89z2"; depends=[Biobase GSEABase multtest]; };
  99   BindingSiteFinder = derive2 { name="BindingSiteFinder"; version="1.2.0"; sha256="1lypprchiyxyfjj33qzq00xla4sqd3w9dp3sa863iyhycwr3bya8"; depends=[GenomicRanges ggforce ggplot2 matrixStats plyr rtracklayer S4Vectors tidyr]; };
 100   BioCor = derive2 { name="BioCor"; version="1.20.0"; sha256="004mksswampwisljcdz6fswwbgdjdii3y86gjzib0gf8v4w7w4q3"; depends=[BiocParallel GSEABase Matrix]; };
 101   BioMM = derive2 { name="BioMM"; version="1.12.0"; sha256="1sxa6safl4dp2b89bmgshdvkc1s0kxrmld3xfv2wlxkf90b3b57h"; depends=[BiocParallel CMplot e1071 ggplot2 glmnet imager lattice nsprcomp precrec ranger rms topGO vioplot xlsx]; };
 102   BioMVCClass = derive2 { name="BioMVCClass"; version="1.64.0"; sha256="078pnyygbvbfxziqspfr1nn78w67xyb4qmiwc34czga5psblvfwz"; depends=[Biobase graph MVCClass Rgraphviz]; };
 103   BioNERO = derive2 { name="BioNERO"; version="1.4.2"; sha256="0dsznfnhidbmf52rv8l26f1ms2k9yy4q4c6cf3x8ylc79c1sjrcp"; depends=[BiocParallel ComplexHeatmap dynamicTreeCut GENIE3 ggnetwork ggnewscale ggplot2 ggrepel igraph intergraph matrixStats minet NetRep networkD3 patchwork RColorBrewer reshape2 SummarizedExperiment sva WGCNA]; };
 104   BioNet = derive2 { name="BioNet"; version="1.56.0"; sha256="0kcw71j4nmdkn373wk21ak6h0v4gycivnfrklb72kk1qcmsy1wrm"; depends=[AnnotationDbi Biobase graph igraph RBGL]; };
 105   BioNetStat = derive2 { name="BioNetStat"; version="1.16.1"; sha256="0zs6pymvxb95sji0rnnzaz3whj7hsvj2kl4n4gzj7w1q0prbfpb2"; depends=[BiocParallel DT ggplot2 Hmisc igraph knitr markdown pathview pheatmap plyr psych RColorBrewer RJSONIO rmarkdown shiny shinyBS whisker yaml]; };
 106   BioPlex = derive2 { name="BioPlex"; version="1.2.3"; sha256="0cn0x6ij2a3xy61bq0qy5amp0ipj4r4shh7g0vlwbkrclj9w347r"; depends=[BiocFileCache GenomeInfoDb GenomicRanges GEOquery graph SummarizedExperiment]; };
 107   BioQC = derive2 { name="BioQC"; version="1.24.0"; sha256="0vb2nnzqvyv25pw8qshcmijravswafg0858pkgqjgiv7wsr2mn3m"; depends=[Biobase edgeR Rcpp]; };
 108   BioTIP = derive2 { name="BioTIP"; version="1.10.0"; sha256="1sihi5zy7mlabh3ix1wvdqz8ibfq1avl8bnxjhvxyzq40zbcklh6"; depends=[cluster GenomicRanges igraph MASS psych scran stringr]; };
 109   Biobase = derive2 { name="Biobase"; version="2.56.0"; sha256="1mnxky78an079p60427cjvk4fzilp0xzy6b85fq274qvdcrz8jbv"; depends=[BiocGenerics]; };
 110   BiocCheck = derive2 { name="BiocCheck"; version="1.32.1"; sha256="0bq4xrz1spp0bmbccxydkw6yw03by5dysz85mn152ab6xixm52lw"; depends=[BiocManager biocViews codetools graph httr knitr stringdist]; };
 111   BiocDockerManager = derive2 { name="BiocDockerManager"; version="1.8.1"; sha256="0a4dcga18bw5mvzmsml28bf4zclz32pp9iflnbvps7pdxvhmmg9d"; depends=[dplyr httr memoise readr whisker]; };
 112   BiocFileCache = derive2 { name="BiocFileCache"; version="2.4.0"; sha256="1bdbmlixrd8wvs25nmzdksq5hwnsxf8b6ds9qwx01h284vky5vsw"; depends=[curl DBI dbplyr dplyr filelock httr rappdirs RSQLite]; };
 113   BiocGenerics = derive2 { name="BiocGenerics"; version="0.42.0"; sha256="0iv9bnpw2hycndwbmjsszqfwrksz6dfr6qcz78jkssc9ldsgmdhc"; depends=[]; };
 114   BiocIO = derive2 { name="BiocIO"; version="1.6.0"; sha256="16j826w4zrmbgpmq6nyglcrjailsfv48ih1rz1qn383g7v503ydp"; depends=[BiocGenerics S4Vectors]; };
 115   BiocNeighbors = derive2 { name="BiocNeighbors"; version="1.14.0"; sha256="1a43hzmcpxviqa9723hkafr6gm358amfpqj9d56imclkkfkdz95x"; depends=[BiocParallel Matrix Rcpp RcppHNSW S4Vectors]; };
 116   BiocOncoTK = derive2 { name="BiocOncoTK"; version="1.16.0"; sha256="1alplszw84vqa1mvzp996f94s40scmh4qwbrqhg43hrnyvbnq7pi"; depends=[bigrquery car ComplexHeatmap curatedTCGAData DBI dplyr DT GenomicFeatures GenomicRanges ggplot2 ggpubr graph httr IRanges magrittr plyr Rgraphviz rjson S4Vectors scales shiny SummarizedExperiment]; };
 117   BiocParallel = derive2 { name="BiocParallel"; version="1.30.4"; sha256="1sf87gxyh41v82pip71qkqpmind357zyngzyg1f80iz65c85xk0k"; depends=[BH codetools futile_logger snow]; };
 118   BiocPkgTools = derive2 { name="BiocPkgTools"; version="1.14.1"; sha256="0akryshjdn227a8ir8r0lb59v060h58rhy5vjmdxax8p81ajzxkd"; depends=[BiocFileCache BiocManager biocViews dplyr DT gh graph htmltools htmlwidgets httr igraph jsonlite magrittr RBGL readr rlang rvest stringr tibble tidyr tidyselect xml2]; };
 119   BiocSet = derive2 { name="BiocSet"; version="1.10.0"; sha256="1ghba7020inrdxlbrrgds9gjymjxjma2p89b9lgkjin89zalqglh"; depends=[AnnotationDbi BiocIO dplyr KEGGREST ontologyIndex plyr rlang S4Vectors tibble tidyr]; };
 120   BiocSingular = derive2 { name="BiocSingular"; version="1.12.0"; sha256="1sraycnn0jahpi8kni1y8ik00ga89fvwqjmbr8388968q22mvm3x"; depends=[beachmat BiocGenerics BiocParallel DelayedArray irlba Matrix Rcpp rsvd S4Vectors ScaledMatrix]; };
 121   BiocSklearn = derive2 { name="BiocSklearn"; version="1.18.2"; sha256="0q9qlp12ycmhnvfqwn7mvrhd8ypwnbbf715ficgx1xnagh72dpgg"; depends=[basilisk reticulate SummarizedExperiment]; };
 122   BiocStyle = derive2 { name="BiocStyle"; version="2.24.0"; sha256="1nwiib201b9q1x19ihqjqr5jl0vnid8wfgpi8sa3y02bn722g5a5"; depends=[BiocManager bookdown knitr rmarkdown yaml]; };
 123   BiocVersion = derive2 { name="BiocVersion"; version="3.15.2"; sha256="0rs4nyza4hqqk204d037gi013135wgfhx5asq2dsdjc9vk5nwzfn"; depends=[]; };
 124   BiocWorkflowTools = derive2 { name="BiocWorkflowTools"; version="1.22.0"; sha256="1jj4icpkhrv9f6yx3vghkpdil1pfghf3yvc9756wmndvhs100r5l"; depends=[BiocStyle bookdown git2r httr knitr rmarkdown rstudioapi stringr usethis]; };
 125   Biostrings = derive2 { name="Biostrings"; version="2.64.1"; sha256="1wk8nlmp6f6fsjrcb4fb48s3ay38yywwad748i6lfkkcw2pdfw33"; depends=[BiocGenerics crayon GenomeInfoDb IRanges S4Vectors XVector]; };
 126   BitSeq = derive2 { name="BitSeq"; version="1.40.0"; sha256="0pfsdc15zfn7sizf0zqh0wjg5yr84kd9lmdifykkbxk882gjy5fh"; depends=[IRanges Rhtslib Rsamtools S4Vectors]; };
 127   BloodGen3Module = derive2 { name="BloodGen3Module"; version="1.4.0"; sha256="1dlb6jbzrdp417sm55y0h90sx2l62h4329l67w49z321yi7iyw1j"; depends=[circlize ComplexHeatmap ExperimentHub ggplot2 gtools limma matrixStats preprocessCore randomcoloR reshape2 SummarizedExperiment testthat V8]; };
 128   BrainSABER = derive2 { name="BrainSABER"; version="1.6.0"; sha256="1rc4ff0rglbj1kax4fdn6mmv8jzz5qyapi9mjb4nh9ffaswfj09n"; depends=[BiocFileCache biomaRt data_table lsa S4Vectors shiny SummarizedExperiment]; };
 129   BridgeDbR = derive2 { name="BridgeDbR"; version="2.6.0"; sha256="1389ymch31wqmp8spvwzyhn95bv1h7nkzhin6mzz1prp8rsdpc0z"; depends=[curl rJava]; };
 130   BrowserViz = derive2 { name="BrowserViz"; version="2.18.0"; sha256="03z1vkbimvhgjl9c08nndvjzgg2d3d3sgx9mk8bv65brpgpzd3nd"; depends=[BiocGenerics httpuv jsonlite]; };
 131   BubbleTree = derive2 { name="BubbleTree"; version="2.26.0"; sha256="1q5hlq80p848askxafni502yxnp587vpla65hb2925pcighnz5a3"; depends=[Biobase BiocGenerics BiocStyle biovizBase dplyr e1071 GenomicRanges ggplot2 gridExtra gtable gtools IRanges limma magrittr plyr RColorBrewer WriteXLS]; };
 132   BufferedMatrix = derive2 { name="BufferedMatrix"; version="1.60.0"; sha256="1sla61mrmwpk3aczgggzmnfgy9wr1cqknv6rsyscjniii7shn360"; depends=[]; };
 133   BufferedMatrixMethods = derive2 { name="BufferedMatrixMethods"; version="1.60.0"; sha256="07m2r046lk1akbccy52n2rg3ydzkwl157xlyylfqhkmpz7x9zix2"; depends=[BufferedMatrix]; };
 134   BumpyMatrix = derive2 { name="BumpyMatrix"; version="1.4.0"; sha256="0gy972qvvvf4rbxrcj24l3x8kk3ic85y6l655d54fvlbwr8h82iv"; depends=[IRanges Matrix S4Vectors]; };
 135   CAEN = derive2 { name="CAEN"; version="1.4.0"; sha256="054wrw550sxn6gn1h3yra623k48syiqn0cm0kz0nn63ys9fmwk3l"; depends=[PoiClaClu SummarizedExperiment]; };
 136   CAFE = derive2 { name="CAFE"; version="1.32.0"; sha256="1mcmfghl982dqr13bnybx0v5gs302hnnar1m64l13f4si6lnxk62"; depends=[affy annotate Biobase biovizBase GenomicRanges ggbio ggplot2 gridExtra IRanges]; };
 137   CAGEfightR = derive2 { name="CAGEfightR"; version="1.16.0"; sha256="1nn1flq3732vbxb7r971sbk1qxiqdgzgib8v0g21v8362vajcjwv"; depends=[assertthat BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicInteractions GenomicRanges Gviz InteractionSet IRanges Matrix pryr rtracklayer S4Vectors SummarizedExperiment]; };
 138   CAGEr = derive2 { name="CAGEr"; version="2.2.0"; sha256="03gxnbsf8byk1ggijf264p6dyvl09hihkmrcx5m28pjs0imlzmhw"; depends=[BiocGenerics BiocParallel BSgenome data_table DelayedArray DelayedMatrixStats formula_tools GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gtools IRanges KernSmooth memoise MultiAssayExperiment plyr reshape2 Rsamtools rtracklayer S4Vectors som stringdist stringi SummarizedExperiment vegan VGAM]; };
 139   CAMERA = derive2 { name="CAMERA"; version="1.52.0"; sha256="0jz8i0m8g8f18yzjzkgf4xsk038nm6h6qdhsdmmkprz97ysjayr5"; depends=[Biobase graph Hmisc igraph RBGL xcms]; };
 140   CARNIVAL = derive2 { name="CARNIVAL"; version="2.6.2"; sha256="0shq6bdhbfvsg0ihdsbz0gdpn8mwa2h67zm6kxfdh862ssfn4rbz"; depends=[dplyr igraph lpSolve readr rjson rmarkdown stringr tibble tidyr]; };
 141   CATALYST = derive2 { name="CATALYST"; version="1.20.1"; sha256="05vfqwa9qsm16px77s9bzygs6zymcxshymmpvz86a9l1cy1yxbza"; depends=[circlize ComplexHeatmap ConsensusClusterPlus cowplot data_table dplyr drc flowCore FlowSOM ggplot2 ggrepel ggridges gridExtra magrittr Matrix matrixStats nnls purrr RColorBrewer reshape2 Rtsne S4Vectors scales scater SingleCellExperiment SummarizedExperiment]; };
 142   CAnD = derive2 { name="CAnD"; version="1.27.0"; sha256="14x0m5iv7dm1iii5zsny9wnf4j5ddh0kij2jm658r3i4wnc99mkb"; depends=[ggplot2 reshape]; };
 143   CBEA = derive2 { name="CBEA"; version="1.0.0"; sha256="08hhpd7syycliqn5fw3x6pfxi89pghm4b4my4p73lvgkr75n71x4"; depends=[BiocParallel BiocSet dplyr fitdistrplus generics glue goftest lmom magrittr mixtools Rcpp rlang SummarizedExperiment tibble tidyr TreeSummarizedExperiment]; };
 144   CCPROMISE = derive2 { name="CCPROMISE"; version="1.22.0"; sha256="1zmm22rbwp706l2xl5623aja0fw01r0w9cn3dv8ga0riz3pz2fy7"; depends=[Biobase CCP GSEABase PROMISE]; };
 145   CEMiTool = derive2 { name="CEMiTool"; version="1.20.0"; sha256="05lpi29mwv45na4b2pi59fdv6vfxdjmyd0xf1lsrmiy7c1p2df8s"; depends=[clusterProfiler data_table dplyr DT fastcluster fgsea ggdendro ggplot2 ggpmisc ggrepel ggthemes gridExtra gtable htmltools igraph intergraph knitr matrixStats network pracma rmarkdown scales sna stringr WGCNA]; };
 146   CFAssay = derive2 { name="CFAssay"; version="1.30.0"; sha256="0cfkkvci9zf08zfgxv6knz00qf89x45g81ifml274y4jg40swcjd"; depends=[]; };
 147   CGEN = derive2 { name="CGEN"; version="3.32.0"; sha256="1010mi5s82q7v2dwfyn1a65cijxpn9lrjgn5pm5s6blzb8l4s7d4"; depends=[mvtnorm survival]; };
 148   CGHbase = derive2 { name="CGHbase"; version="1.56.0"; sha256="1q8yy60r4g5nyv2gbfdgk192xd73c0rrjr668d5616ddb7sx8wcr"; depends=[Biobase marray]; };
 149   CGHcall = derive2 { name="CGHcall"; version="2.58.0"; sha256="1qpsibp4gb09sn6fkwwrdjkh3a28lqfbk18c6fvn4m386j96ps65"; depends=[Biobase CGHbase DNAcopy impute snowfall]; };
 150   CGHnormaliter = derive2 { name="CGHnormaliter"; version="1.50.0"; sha256="16i0i83wd3ibzkj5l5az3jxgsp78i6ragl3yiy3yymvgr9f2z3fz"; depends=[Biobase CGHbase CGHcall]; };
 151   CGHregions = derive2 { name="CGHregions"; version="1.54.0"; sha256="18k833qpbkyj8ywvgmglcxm3cqaj1ys4ygq7cvnv43d6sm4fi44m"; depends=[Biobase CGHbase]; };
 152   CHETAH = derive2 { name="CHETAH"; version="1.12.1"; sha256="19nx25f4m45k9wc4rdb5siw7p4zdfrm75x0rwfckbrkqlk9iaj4q"; depends=[bioDist corrplot cowplot dendextend ggplot2 pheatmap plotly reshape2 S4Vectors shiny SingleCellExperiment SummarizedExperiment]; };
 153   CHRONOS = derive2 { name="CHRONOS"; version="1.24.1"; sha256="1xkjliliwq03qklhcsvm2sbw6hprvzwid2cccb5zyx6gap7kszaz"; depends=[biomaRt circlize doParallel foreach graph igraph openxlsx RBGL RCurl rJava XML]; };
 154   CIMICE = derive2 { name="CIMICE"; version="1.4.0"; sha256="12knj9vz41kbx0jzqw6ah1ils6hsxv5fbnw98mbi3phnr3kl9ih4"; depends=[assertthat dplyr expm ggcorrplot ggplot2 ggraph glue igraph maftools Matrix networkD3 purrr tidygraph tidyr visNetwork]; };
 155   CINdex = derive2 { name="CINdex"; version="1.24.0"; sha256="1k6wl4y4za85n8pf96x9zj7irmq3glkpyz612wxj1s16whl6wy6s"; depends=[bitops dplyr GenomeInfoDb GenomicRanges gplots gridExtra IRanges png S4Vectors som stringr]; };
 156   CMA = derive2 { name="CMA"; version="1.54.0"; sha256="0bl8j1dx153k66vvmhsln1s58jnjfrp6ihfnydsgiq72zqkxhcbz"; depends=[Biobase]; };
 157   CNAnorm = derive2 { name="CNAnorm"; version="1.42.0"; sha256="1cnf8lj16d1z663ff4k5vfq4bkyj1jims6a6phkjj1sb1zsx3xji"; depends=[DNAcopy]; };
 158   CNEr = derive2 { name="CNEr"; version="1.32.0"; sha256="05zvr5fv8nprxqh2wvvrlf737dq242i20p1rpyqjaxihl6xl62kq"; depends=[annotate BiocGenerics Biostrings DBI GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 GO_db IRanges KEGGREST poweRlaw R_utils readr reshape2 RSQLite rtracklayer S4Vectors XVector]; };
 159   CNORdt = derive2 { name="CNORdt"; version="1.38.0"; sha256="161qhpx6kyn87h1p72mwfpi1pd4ck3cssr4f291axhw99sg6968c"; depends=[abind CellNOptR]; };
 160   CNORfeeder = derive2 { name="CNORfeeder"; version="1.36.1"; sha256="07k18izfzfnm7l5bddbdyhignv18fgv3varvi8ynv22zd0gf9bs1"; depends=[CellNOptR graph]; };
 161   CNORfuzzy = derive2 { name="CNORfuzzy"; version="1.38.0"; sha256="0qnfvfd2wsmpaggq2amp8n1ry7wgysxysfh97rvrx5ymivbzr18p"; depends=[CellNOptR nloptr]; };
 162   CNORode = derive2 { name="CNORode"; version="1.38.0"; sha256="0bvlwlf0mm6q3cp2vf87rb7xsha5cz9bk7vsi6ssxngmspiq3kjz"; depends=[CellNOptR genalg knitr]; };
 163   CNTools = derive2 { name="CNTools"; version="1.52.0"; sha256="1d5ahszdf0brbmhd1vi2l9v1qi8kbpkw2kawcdf3rxibla0756y3"; depends=[genefilter]; };
 164   CNVMetrics = derive2 { name="CNVMetrics"; version="1.0.0"; sha256="15ihpsr804qrywf968h0zvskcz1w8117hlh6ly5lr30afs4kfq5g"; depends=[BiocParallel GenomicRanges gridExtra IRanges magrittr pheatmap S4Vectors]; };
 165   CNVPanelizer = derive2 { name="CNVPanelizer"; version="1.28.0"; sha256="1d7srf01ds32nbn2m26nc2bffi59dc2pc9nn5whb7kkgawgbh4a9"; depends=[BiocGenerics exomeCopy foreach GenomeInfoDb GenomicRanges ggplot2 gplots IRanges NOISeq openxlsx plyr reshape2 Rsamtools S4Vectors shiny shinyFiles shinyjs stringr testthat]; };
 166   CNVRanger = derive2 { name="CNVRanger"; version="1.12.0"; sha256="08w1nmpvyy302024g6xcb3vi4hr8kspxqx40qs234l6k62xsri4z"; depends=[BiocGenerics BiocParallel data_table edgeR GDSArray gdsfmt GenomeInfoDb GenomicRanges IRanges lattice limma plyr qqman RaggedExperiment rappdirs reshape2 S4Vectors SNPRelate SummarizedExperiment]; };
 167   CNVfilteR = derive2 { name="CNVfilteR"; version="1.10.1"; sha256="1sbgzsbiz0jhlswsj4xa517ay5pkjncikz653k6n7jiq71d2x81i"; depends=[assertthat Biostrings CopyNumberPlots GenomeInfoDb GenomicRanges IRanges karyoploteR pracma regioneR Rsamtools SummarizedExperiment VariantAnnotation]; };
 168   CNVgears = derive2 { name="CNVgears"; version="1.4.0"; sha256="1n93vbxsb69j302rbbgb10z576hmhm0f8hwjv36xr92chy7x6fya"; depends=[data_table ggplot2]; };
 169   CNViz = derive2 { name="CNViz"; version="1.4.0"; sha256="062rr0im9dfi7qgkwz3a34m63vd479n9m7d1nlm22fcalym5s08r"; depends=[CopyNumberPlots dplyr DT GenomicRanges karyoploteR magrittr plotly scales shiny]; };
 170   CNVrd2 = derive2 { name="CNVrd2"; version="1.34.0"; sha256="1mdn5dljl8cw7sax4d0p6pv7kc9li8g3r19yybyhbv7wzh6q350j"; depends=[DNAcopy ggplot2 gridExtra IRanges rjags Rsamtools VariantAnnotation]; };
 171   COCOA = derive2 { name="COCOA"; version="2.10.0"; sha256="0ml09hihkf0drx743a44ff978nn8jgcpf4wchr7zybyj5k52dc11"; depends=[Biobase BiocGenerics ComplexHeatmap data_table fitdistrplus GenomicRanges ggplot2 IRanges MIRA S4Vectors simpleCache tidyr]; };
 172   CODEX = derive2 { name="CODEX"; version="1.28.0"; sha256="11pq2hym0hhg42pbk59fj0xri12i8mn6qhf3ad182asqh5sngvdp"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb IRanges Rsamtools S4Vectors]; };
 173   COHCAP = derive2 { name="COHCAP"; version="1.42.0"; sha256="0wy91spx9iv81xqw7kqljhmy2wazpmk8s17bq6ssmybg6yxhdj5j"; depends=[BH COHCAPanno gplots RColorBrewer Rcpp RcppArmadillo WriteXLS]; };
 174   COMPASS = derive2 { name="COMPASS"; version="1.34.0"; sha256="0ib2v9d8bzjykrdfpclzxh27lkj2iaxlvl6z58n44x3kflb4js0w"; depends=[abind BiocStyle clue coda data_table dplyr foreach knitr magrittr pdist plyr RColorBrewer Rcpp reshape2 rlang rmarkdown scales tidyr]; };
 175   CONFESS = derive2 { name="CONFESS"; version="1.24.0"; sha256="11k4j21lj27pp6ngf361k1mmq7drnd7xca62jsnrh4h9j00lsmg8"; depends=[changepoint cluster contrast data_table EBImage ecp flexmix flowClust flowCore flowMeans flowMerge flowPeaks foreach ggplot2 limma MASS moments outliers plotrix raster readbitmap reshape2 SamSPECTRAL waveslim wavethresh zoo]; };
 176   CONSTANd = derive2 { name="CONSTANd"; version="1.4.0"; sha256="04lw35r8c979xmzlq7ikf83vficp6rjlrr0iqzs6wlhzj5s0zfpz"; depends=[]; };
 177   CORREP = derive2 { name="CORREP"; version="1.62.0"; sha256="0lkgnypkpjbx9qhwph1ylijfqcxhjrvkdhlf4i5mpnq9ghpa0a3z"; depends=[e1071]; };
 178   COSNet = derive2 { name="COSNet"; version="1.30.0"; sha256="1gz1kxjbbigvbgzk1sb3207gxhx70jnd1dfh89xpwsswia9r6laz"; depends=[]; };
 179   COTAN = derive2 { name="COTAN"; version="1.0.0"; sha256="0rkxz9f13jdm903k8ywrynvrpx4izv662pl0awbclicb1994adpy"; depends=[basilisk circlize ComplexHeatmap dplyr ggplot2 ggrepel Matrix reticulate Rfast rlang scales tibble tidyr]; };
 180   CRISPRseek = derive2 { name="CRISPRseek"; version="1.36.0"; sha256="1sw4jrq14wnc9v5ybgj3xrmnvh6kf9z6ybvskbx6nm29mz8116z3"; depends=[BiocGenerics Biostrings BSgenome data_table DelayedArray dplyr GenomeInfoDb GenomicRanges hash IRanges keras mltools reticulate rhdf5 S4Vectors seqinr XVector]; };
 181   CRImage = derive2 { name="CRImage"; version="1.44.0"; sha256="0bf6lk3c04c5l08md43lda2rwj3way79ap259d8cz5yn24dhklf1"; depends=[aCGH DNAcopy e1071 EBImage foreach MASS sgeostat]; };
 182   CSAR = derive2 { name="CSAR"; version="1.48.0"; sha256="0lzdl84d84nf5jjw5cc5lr36pllaw89ci08sn559dsrmvn9c5c1w"; depends=[GenomeInfoDb GenomicRanges IRanges S4Vectors]; };
 183   CSSP = derive2 { name="CSSP"; version="1.34.0"; sha256="0asb29dxhr92cspfq6v0iz8pdhf2j3amrlisjpm9nwhd8nwaxbj0"; depends=[]; };
 184   CSSQ = derive2 { name="CSSQ"; version="1.8.0"; sha256="1kgadkqjcac127xbaxr38r2icfhdz6y4q1w9xpamj4mjb6d27hq7"; depends=[GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment]; };
 185   CTDquerier = derive2 { name="CTDquerier"; version="2.3.1"; sha256="18pxg4qhgf03sq48yp5m0x0jq5y27pbpqqlcvpn2pj09dzx7camc"; depends=[BiocFileCache ggplot2 gridExtra igraph RCurl S4Vectors stringdist stringr]; };
 186   CancerInSilico = derive2 { name="CancerInSilico"; version="2.16.0"; sha256="1xswflpx055x3lkakbvxaw6q8y4ndrpr9ma1wyia63ghvdnaian0"; depends=[BH Rcpp]; };
 187   CancerSubtypes = derive2 { name="CancerSubtypes"; version="1.22.1"; sha256="0dg35d0m1lvrqbq3v406qagjdpwi2kfsfvnby3mcj9lpn7vahg0x"; depends=[cluster ConsensusClusterPlus impute limma NMF sigclust survival]; };
 188   Cardinal = derive2 { name="Cardinal"; version="2.14.0"; sha256="07048rzp4x6593836a9iag8xjq93a94z9zvj6cbp0bj15w3p62r6"; depends=[Biobase BiocGenerics BiocParallel dplyr EBImage irlba lattice magrittr Matrix matter mclust nlme ProtGenerics S4Vectors signal sp viridisLite]; };
 189   Category = derive2 { name="Category"; version="2.62.0"; sha256="07js03cfdd6gzbzw14iavlqxynfcqszh988v6k1a3h074wxiivqd"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI genefilter graph GSEABase Matrix RBGL]; };
 190   CausalR = derive2 { name="CausalR"; version="1.28.0"; sha256="1ij6z12a6irbd1hd8nzd01xipmrgrpj7gqm6gp5r3hd7gfdpsway"; depends=[igraph]; };
 191   CeTF = derive2 { name="CeTF"; version="1.8.0"; sha256="0hs5jk6x6kamajs61122vr39n7x65rx5qk3sfj2lil9r4wlmmc13"; depends=[circlize clusterProfiler ComplexHeatmap DESeq2 dplyr GenomicTools_fileHandler GGally ggnetwork ggplot2 ggpubr ggrepel igraph Matrix network Rcpp RcppArmadillo RCy3 S4Vectors SummarizedExperiment]; };
 192   CellBarcode = derive2 { name="CellBarcode"; version="1.2.0"; sha256="1xan4ha7aiasch2h1lk7adj2dc3prpmiily1s6pfy0chwj0bi76n"; depends=[Biostrings Ckmeans_1d_dp data_table egg ggplot2 magrittr plyr Rcpp S4Vectors ShortRead stringr]; };
 193   CellBench = derive2 { name="CellBench"; version="1.12.0"; sha256="1sw3z3n7vdvw2352amc7biz35dmyzx7fhxdmz1jr0gdf0fhwhr1s"; depends=[BiocFileCache BiocGenerics BiocParallel dplyr glue lubridate magrittr memoise purrr rappdirs rlang SingleCellExperiment tibble tidyr tidyselect]; };
 194   CellMapper = derive2 { name="CellMapper"; version="1.22.0"; sha256="1sz81czvam86am9mrzs3kn4qn0qz6402i7n2bdic7hcchl00qbbd"; depends=[S4Vectors]; };
 195   CellMixS = derive2 { name="CellMixS"; version="1.12.0"; sha256="06xjxdgmgndc06xvgg1kylnh8248j780r4jbc27hga6jha9jbh1f"; depends=[BiocGenerics BiocNeighbors BiocParallel cowplot dplyr ggplot2 ggridges kSamples magrittr purrr scater SingleCellExperiment SummarizedExperiment tidyr viridis]; };
 196   CellNOptR = derive2 { name="CellNOptR"; version="1.42.1"; sha256="0hacmjg02hz9qjk0dj95pwg3670gkvy22hs1wlvkrkicmwk4746r"; depends=[ggplot2 graph igraph RBGL RCurl Rgraphviz rmarkdown stringi stringr XML]; };
 197   CellScore = derive2 { name="CellScore"; version="1.16.0"; sha256="11iqs9isggfp5l1sh9ndsrb5f57lhgpspsb5mmzd1vn182bsj3n8"; depends=[Biobase gplots lsa RColorBrewer squash]; };
 198   CellTrails = derive2 { name="CellTrails"; version="1.14.0"; sha256="11xrkib9ajwsyz608d221r2z0nb67063ssmwd6i2zd4i7vhci5b0"; depends=[Biobase BiocGenerics cba dendextend dtw EnvStats ggplot2 ggrepel igraph maptree mgcv reshape2 Rtsne SingleCellExperiment SummarizedExperiment]; };
 199   CellaRepertorium = derive2 { name="CellaRepertorium"; version="1.6.0"; sha256="0ccx0698rircn5csd56il1v4s0707fhp2b7yidadrn6apv0jyd7b"; depends=[BiocGenerics Biostrings dplyr forcats Matrix progress purrr Rcpp reshape2 rlang S4Vectors stringr tibble tidyr]; };
 200   CelliD = derive2 { name="CelliD"; version="1.4.0"; sha256="0697cfm9mlxk12acxxz68rng8niavmf42qlrkd8063k9kkzzh01q"; depends=[BiocParallel data_table fastmatch fgsea ggplot2 glue irlba Matrix matrixStats pbapply Rcpp RcppArmadillo reticulate Rtsne scater Seurat SingleCellExperiment stringr SummarizedExperiment tictoc umap]; };
 201   Cepo = derive2 { name="Cepo"; version="1.2.0"; sha256="08bpddpkagp9yzb65j3caf740vndnk399rm21f32qvbq803y0lp5"; depends=[BiocParallel DelayedArray DelayedMatrixStats dplyr ggplot2 GSEABase HDF5Array patchwork reshape2 rlang S4Vectors SingleCellExperiment SummarizedExperiment]; };
 202   CexoR = derive2 { name="CexoR"; version="1.34.0"; sha256="1sph506rwc4p25ar6km7yvg11aj7clk4bjncnlb75fynrv9zsarw"; depends=[genomation GenomeInfoDb GenomicRanges idr IRanges RColorBrewer Rsamtools rtracklayer S4Vectors]; };
 203   ChAMP = derive2 { name="ChAMP"; version="2.26.0"; sha256="1ck4pn24q222k4bhv4ngimzwyzgkf7a0nw9svhcmv91ys5h4lhhj"; depends=[bumphunter ChAMPdata combinat dendextend DMRcate DNAcopy doParallel DT GenomicRanges ggplot2 globaltest goseq Hmisc Illumina450ProbeVariants_db IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b4_hg19 IlluminaHumanMethylationEPICmanifest illuminaio impute isva kpmt limma marray matrixStats minfi missMethyl plotly plyr preprocessCore prettydoc quadprog qvalue RColorBrewer rmarkdown RPMM shiny shinythemes sva wateRmelon]; };
 204   ChIC = derive2 { name="ChIC"; version="1.16.0"; sha256="17az2nhccji8qjllvr5adzb8sqr15rhc4lg0iq52gmn6w7f7vrlz"; depends=[BiocGenerics caret caTools ChIC_data genomeIntervals GenomicRanges IRanges progress randomForest Rsamtools S4Vectors spp]; };
 205   ChIPComp = derive2 { name="ChIPComp"; version="1.26.0"; sha256="06q34y59gf1iz0rs7y5x8ndy1wa95j65rfmz37aym5c46ijqsnq0"; depends=[BiocGenerics BSgenome_Hsapiens_UCSC_hg19 BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicRanges IRanges limma Rsamtools rtracklayer S4Vectors]; };
 206   ChIPQC = derive2 { name="ChIPQC"; version="1.32.2"; sha256="1c7yi0ga6fbw7903aakgkvm9048a9yndmlg7sn15i2pjrvwql8ms"; depends=[Biobase BiocGenerics BiocParallel chipseq DiffBind GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gtools IRanges Nozzle_R1 reshape2 Rsamtools S4Vectors TxDb_Celegans_UCSC_ce6_ensGene TxDb_Dmelanogaster_UCSC_dm3_ensGene TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene TxDb_Rnorvegicus_UCSC_rn4_ensGene]; };
 207   ChIPXpress = derive2 { name="ChIPXpress"; version="1.40.0"; sha256="1w8kvpvvwh7bjpk4672060vz0nn6ya0lm40k97grss1i4kmv7zna"; depends=[affy biganalytics bigmemory Biobase ChIPXpressData frma GEOquery]; };
 208   ChIPanalyser = derive2 { name="ChIPanalyser"; version="1.18.0"; sha256="0vi7qngbyss7h6zzbqv5x31x09pnwkrhxgfsbmhazz6wczmwkcix"; depends=[BiocManager Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges RcppRoll ROCR rtracklayer S4Vectors]; };
 209   ChIPexoQual = derive2 { name="ChIPexoQual"; version="1.20.0"; sha256="1r4s8awvwwj1g33jpnzfxji23mfy0chkhi14i0ml5sh090xijpaz"; depends=[BiocParallel biovizBase broom data_table dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 hexbin IRanges RColorBrewer rmarkdown Rsamtools S4Vectors scales viridis]; };
 210   ChIPpeakAnno = derive2 { name="ChIPpeakAnno"; version="3.30.1"; sha256="0a26glldxczcfymjvd45gv5m4hympziivm6wwx4ab9wld7n43l8y"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings DBI dplyr ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 graph InteractionSet IRanges KEGGREST matrixStats multtest RBGL regioneR Rsamtools rtracklayer S4Vectors SummarizedExperiment VennDiagram]; };
 211   ChIPseeker = derive2 { name="ChIPseeker"; version="1.32.1"; sha256="0l2514wvlc8q7n1zjzfrghdg372sp73z39204bkif3g6pdkcvbcf"; depends=[AnnotationDbi BiocGenerics boot dplyr enrichplot GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggVennDiagram gplots gtools IRanges magrittr plotrix RColorBrewer rtracklayer S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene]; };
 212   ChIPseqR = derive2 { name="ChIPseqR"; version="1.50.0"; sha256="09z03ym6iqllj007558pijksjz6bqizrq8r5y1s9f12919szydsv"; depends=[BiocGenerics Biostrings fBasics GenomicRanges HilbertVis IRanges S4Vectors ShortRead timsac]; };
 213   ChIPsim = derive2 { name="ChIPsim"; version="1.50.0"; sha256="1rjh61721pxm3r0zh1jpk65f2ll7yyhk7d92hvp4hjmq8283xwsh"; depends=[Biostrings IRanges ShortRead XVector]; };
 214   ChemmineOB = derive2 { name="ChemmineOB"; version="1.34.0"; sha256="1cxblrisvqmrng5zvsm2x9g2rjl088s9jmrxxapgbf5zxdv1h1lb"; depends=[BH BiocGenerics Rcpp zlibbioc]; };
 215   ChemmineR = derive2 { name="ChemmineR"; version="3.48.0"; sha256="1nri4zkc9lp1mqgsi0h58486vixwiv2989b6pmx2aj5c3575i0ma"; depends=[base64enc BH BiocGenerics DBI digest DT ggplot2 gridExtra jsonlite png Rcpp RCurl rjson rsvg stringi]; };
 216   Chicago = derive2 { name="Chicago"; version="1.24.0"; sha256="13vzxmvxpc3r9gii37zvhhr5nbnaggrva97g6m2n02qn9daf6vmm"; depends=[data_table Delaporte Hmisc MASS matrixStats]; };
 217   ChromHeatMap = derive2 { name="ChromHeatMap"; version="1.50.0"; sha256="1k7w5dlq5wa87rnqizvpr1pj3dx4l1ja6fls0691793ag337av0l"; depends=[annotate AnnotationDbi Biobase BiocGenerics GenomicRanges IRanges rtracklayer]; };
 218   ChromSCape = derive2 { name="ChromSCape"; version="1.6.0"; sha256="0hvk0lpslmlbim3dlr8rngp6ggr8chn2wbx344mf71hy48qyvarh"; depends=[batchelor BiocParallel colorRamps colourpicker ConsensusClusterPlus coop DelayedArray dplyr DT edgeR forcats fs GenomicRanges gggenes ggplot2 ggrepel gridExtra IRanges irlba jsonlite kableExtra Matrix matrixTests msigdbr plotly qs qualV Rcpp rlist Rsamtools rtracklayer Rtsne S4Vectors scater scran shiny shinycssloaders shinydashboard shinydashboardPlus shinyFiles shinyhelper shinyjs shinyWidgets SingleCellExperiment stringdist SummarizedExperiment tibble tidyr umap viridis]; };
 219   CiteFuse = derive2 { name="CiteFuse"; version="1.8.0"; sha256="19l1splp6364wfmddxxpj2zlq30frglzcrfs3xhkrai2yfx2cnmy"; depends=[cowplot dbscan ggplot2 ggraph ggridges gridExtra igraph Matrix mixtools pheatmap propr randomForest reshape2 rhdf5 rlang Rtsne S4Vectors scales scran SingleCellExperiment SummarizedExperiment uwot]; };
 220   ClassifyR = derive2 { name="ClassifyR"; version="3.0.3"; sha256="1a24i413v2cvmcf9f20gdvdkvwjx2yvlhbiasiwnmflb0p95n48m"; depends=[BiocParallel dplyr MultiAssayExperiment randomForest rlang S4Vectors survival tidyr]; };
 221   Clomial = derive2 { name="Clomial"; version="1.32.0"; sha256="0l1z45yp02hqjrrbyggk78fcm8g25sgdqsy4z2s4b2phrjh8nlc2"; depends=[matrixStats permute]; };
 222   Clonality = derive2 { name="Clonality"; version="1.44.0"; sha256="08z691r97krlzxwzcfhqkcpjwiacdxlfds1g4nzzi680zmvrdb4n"; depends=[DNAcopy]; };
 223   CluMSID = derive2 { name="CluMSID"; version="1.12.0"; sha256="0g9ml6dw5flcjlqjr4y33dy17hz2g9r7kavhywzgzh4167ppi0vh"; depends=[ape Biobase dbscan GGally ggplot2 gplots MSnbase mzR network plotly RColorBrewer S4Vectors sna]; };
 224   ClusterJudge = derive2 { name="ClusterJudge"; version="1.18.0"; sha256="0aw6dpqb8ky6in6a7is6fjjhng74vzqfirrvx4f7pvhj3hcmq22i"; depends=[httr infotheo jsonlite lattice latticeExtra]; };
 225   ClusterSignificance = derive2 { name="ClusterSignificance"; version="1.24.0"; sha256="1njqcwlbxfb0xc9jyxli3hyq5fjivvhklhvxqcr4aqg9as577qad"; depends=[pracma princurve RColorBrewer scatterplot3d]; };
 226   CoCiteStats = derive2 { name="CoCiteStats"; version="1.68.0"; sha256="1agaxkxzgxfz7ycyjdmkfm1r21lhamkm7y7k7nxqkwpdz8rxg45y"; depends=[AnnotationDbi org_Hs_eg_db]; };
 227   CoGAPS = derive2 { name="CoGAPS"; version="3.16.0"; sha256="0ssq59pz0jfdpzj5dhh5bri6iffalhrgvl330v0q0zbj854fagm3"; depends=[BH BiocParallel cluster gplots RColorBrewer Rcpp rhdf5 S4Vectors SingleCellExperiment SummarizedExperiment]; };
 228   CoRegNet = derive2 { name="CoRegNet"; version="1.34.0"; sha256="16vqv6nc59jwyprhbwvlcmzya3837kimaplj0h09qmch9dr50yrb"; depends=[arules igraph shiny]; };
 229   Cogito = derive2 { name="Cogito"; version="1.2.0"; sha256="0sahx7cdqqnpzwb0164c84xwr246aiv4jdv9b07mw3k4s45z3h37"; depends=[AnnotationDbi BiocManager entropy GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 jsonlite magrittr rmarkdown S4Vectors TxDb_Mmusculus_UCSC_mm9_knownGene]; };
 230   ComPrAn = derive2 { name="ComPrAn"; version="1.4.0"; sha256="0wwx025sv07h4xf3nvvqijvyca5mwdb8vsb8kvp4g0rxngc6jm30"; depends=[data_table dplyr DT forcats ggplot2 magrittr purrr RColorBrewer rio rlang scales shiny shinydashboard shinyjs stringr tibble tidyr VennDiagram]; };
 231   ComplexHeatmap = derive2 { name="ComplexHeatmap"; version="2.12.1"; sha256="0b4p3ijhdcydfp0j58xlb5dn7d3m2x420n91rl9diqpg4r2gl0s8"; depends=[circlize clue codetools colorspace digest doParallel foreach GetoptLong GlobalOptions IRanges matrixStats png RColorBrewer]; };
 232   CompoundDb = derive2 { name="CompoundDb"; version="1.0.2"; sha256="1lwl4n9zm196l8dc5wdp4xl1h5dncbswqsninzzdqjrdwbpflkfz"; depends=[AnnotationFilter Biobase BiocGenerics ChemmineR DBI dbplyr dplyr IRanges jsonlite MetaboCoreUtils MsCoreUtils ProtGenerics RSQLite S4Vectors Spectra tibble xml2]; };
 233   ConsensusClusterPlus = derive2 { name="ConsensusClusterPlus"; version="1.60.0"; sha256="1021cix4mr9qsafskw4kk1l3wdzx9pk2gcwjifz6f4zqxss9v07p"; depends=[ALL Biobase cluster]; };
 234   CopyNumberPlots = derive2 { name="CopyNumberPlots"; version="1.12.0"; sha256="01sxmgsjrwhg8j7gckmcjwjy0yfbhw2rnww8z4hk0ig5vcb8g778"; depends=[cn_mops GenomeInfoDb GenomicRanges IRanges karyoploteR regioneR rhdf5 Rsamtools SummarizedExperiment VariantAnnotation]; };
 235   CopywriteR = derive2 { name="CopywriteR"; version="2.28.0"; sha256="1k11kvam96hpg71hz2n9cfzizmb7d1bmq5zfvm34s7fn09is60xb"; depends=[BiocParallel chipseq CopyhelpeR data_table DNAcopy futile_logger GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges matrixStats Rsamtools S4Vectors]; };
 236   CoreGx = derive2 { name="CoreGx"; version="2.0.2"; sha256="06wd9z8bgccxxxyipv30sgc2cxqnr1fmlpr3c11bqzaxp2g42y0a"; depends=[bench Biobase BiocGenerics BiocParallel BumpyMatrix checkmate crayon data_table glue lsa MatrixGenerics MultiAssayExperiment piano rlang S4Vectors SummarizedExperiment]; };
 237   Cormotif = derive2 { name="Cormotif"; version="1.42.0"; sha256="0ww39z987ig23sn9w2m7jd6rv3njiyslnzcxxzi6gbqy0dax8n93"; depends=[affy limma]; };
 238   CoverageView = derive2 { name="CoverageView"; version="1.34.0"; sha256="0mh66l4yh6rpd1r7qbqwh5jkklqyvpfiap0zcqhz9kimssm2pbbp"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors]; };
 239   CrispRVariants = derive2 { name="CrispRVariants"; version="1.24.0"; sha256="05hb0z6zmi6vxn11l5cih7ja92362v6idzwiwjk67dk4rrk273va"; depends=[AnnotationDbi BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges reshape2 Rsamtools S4Vectors]; };
 240   CyTOFpower = derive2 { name="CyTOFpower"; version="1.2.0"; sha256="0dkz6wihnlvmrbjvw1rigcm5mff9vds0izqhcr4507cmvclw6984"; depends=[CytoGLMM diffcyt dplyr DT ggplot2 magrittr rlang shiny shinyFeedback shinyjs shinyMatrix SummarizedExperiment tibble tidyr]; };
 241   CytoDx = derive2 { name="CytoDx"; version="1.16.0"; sha256="0rk3ksgycwxagkyvl3qm0sbcrzjwlmll9mrhiwyj6n3divw2qg81"; depends=[doParallel dplyr flowCore glmnet rpart rpart_plot]; };
 242   CytoGLMM = derive2 { name="CytoGLMM"; version="1.4.0"; sha256="04k9gz1rbz2rkkdcn1g1ya6dcjslk4h8427dmy9mkz58nvyjg1ya"; depends=[BiocParallel caret cowplot doParallel dplyr factoextra flexmix ggplot2 ggrepel logging magrittr MASS Matrix mbest pheatmap RColorBrewer rlang speedglm stringr strucchange tibble tidyr]; };
 243   CytoML = derive2 { name="CytoML"; version="2.8.1"; sha256="01yzdljpyq92bv318b5qs29f190226zwbqjnckvxmbb0k8m7s5hw"; depends=[base64enc BH Biobase corpcor cytolib data_table dplyr flowCore flowWorkspace ggcyto graph jsonlite lattice openCyto plyr RBGL Rcpp RcppArmadillo RcppParallel Rgraphviz Rhdf5lib RProtoBufLib RUnit tibble XML xml2 yaml]; };
 244   CytoTree = derive2 { name="CytoTree"; version="1.6.0"; sha256="1dsdhwjkd3ngnw50fs6vz048afk47r95vhi0wqj8sip11nhndkd8"; depends=[Biobase BiocNeighbors cluster destiny flowCore FlowSOM flowUtils ggplot2 gmodels igraph limma Matrix matrixStats mclust pheatmap prettydoc RANN Rcpp Rtsne scatterpie scatterplot3d stringr sva umap]; };
 245   DAMEfinder = derive2 { name="DAMEfinder"; version="1.8.0"; sha256="123ra94bij0m45j2fzqr7fjipj4ld9kgk0kir1zfdbbd5h8h4mdf"; depends=[BiocGenerics Biostrings bumphunter cowplot GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges limma plyr readr reshape2 Rsamtools S4Vectors stringr SummarizedExperiment VariantAnnotation]; };
 246   DAPAR = derive2 { name="DAPAR"; version="1.28.5"; sha256="1z7p6h1j76k5dhqd1fs1swy2iyjh79h50nlagkdbxfpcc9vcfa3z"; depends=[Biobase DAPARdata foreach highcharter MSnbase]; };
 247   DART = derive2 { name="DART"; version="1.44.0"; sha256="105f3awf9dxkmrqgxjqzsragvhavfnygzgggi0mgq330ybmmp1as"; depends=[igraph]; };
 248   DECIPHER = derive2 { name="DECIPHER"; version="2.24.0"; sha256="045q2bfzgq1yzhyrzvrhrnmlpka4gikrajxxwv05szksy5nvp7q5"; depends=[Biostrings DBI IRanges RSQLite S4Vectors XVector]; };
 249   DEComplexDisease = derive2 { name="DEComplexDisease"; version="1.16.0"; sha256="09a967x1rnv7byjwh29ngjhs67rgg27zblmlzx6pyqlwy5jsp89d"; depends=[BiocParallel ComplexHeatmap DESeq2 edgeR Rcpp SummarizedExperiment]; };
 250   DEFormats = derive2 { name="DEFormats"; version="1.24.0"; sha256="1y6z5zvqmcrsl184skmlryi27s6511xas0nr117mz1g7skd5j2f4"; depends=[checkmate data_table DESeq2 edgeR GenomicRanges S4Vectors SummarizedExperiment]; };
 251   DEGraph = derive2 { name="DEGraph"; version="1.48.0"; sha256="0jdz7snssfiq9rv48irqsxzsgw9j0276wgvp61fpp37av4hp1dh2"; depends=[graph KEGGgraph lattice mvtnorm NCIgraph R_methodsS3 R_utils RBGL Rgraphviz rrcov]; };
 252   DEGreport = derive2 { name="DEGreport"; version="1.32.0"; sha256="0lgz1zyy3dn1nhjkn9sp0bs6psrnvkli74y1aixrmq8wmq8dq526"; depends=[Biobase BiocGenerics broom circlize cluster ComplexHeatmap ConsensusClusterPlus cowplot DESeq2 dplyr edgeR ggdendro ggplot2 ggrepel knitr logging magrittr Nozzle_R1 psych RColorBrewer reshape rlang S4Vectors scales stringr SummarizedExperiment tibble tidyr]; };
 253   DEGseq = derive2 { name="DEGseq"; version="1.50.0"; sha256="1pjyxhfbm03dmq2hlh2ndr9hr9q8mc5skyraywnhk7spa59vz11f"; depends=[qvalue]; };
 254   DEP = derive2 { name="DEP"; version="1.18.0"; sha256="019brs6jspc32ax6gj0l9kqi2ih79jsgwin4akfl80pyz83rr7j6"; depends=[assertthat circlize cluster ComplexHeatmap dplyr DT fdrtool ggplot2 ggrepel gridExtra imputeLCMD limma MSnbase purrr RColorBrewer readr rmarkdown shiny shinydashboard SummarizedExperiment tibble tidyr vsn]; };
 255   DEScan2 = derive2 { name="DEScan2"; version="1.16.0"; sha256="0hqj9vp8pqfn75yzn3njfns4ls5fvryk483fn2qfmh30cf38flsn"; depends=[BiocGenerics BiocParallel ChIPpeakAnno data_table DelayedArray GenomeInfoDb GenomicAlignments GenomicRanges glue IRanges plyr Rcpp RcppArmadillo rtracklayer S4Vectors SummarizedExperiment]; };
 256   DESeq2 = derive2 { name="DESeq2"; version="1.36.0"; sha256="06mvb0jqn2fg96wfwspv0kzpa8xpimzaldrcy8m2d4yk76xwsdr7"; depends=[Biobase BiocGenerics BiocParallel genefilter geneplotter GenomicRanges ggplot2 IRanges locfit Rcpp RcppArmadillo S4Vectors SummarizedExperiment]; };
 257   DEWSeq = derive2 { name="DEWSeq"; version="1.10.0"; sha256="138j21nph0nzn69qs1gqpwqv6hx3a75rbm5k8p5xaaii3jr5jf1w"; depends=[BiocGenerics BiocParallel data_table DESeq2 GenomeInfoDb GenomicRanges R_utils S4Vectors SummarizedExperiment]; };
 258   DEXSeq = derive2 { name="DEXSeq"; version="1.42.0"; sha256="1dzx9mvm8pvcrwr88rin3flnpmzp3vq8mvspx9s8virqhv1102am"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel biomaRt DESeq2 genefilter geneplotter GenomicRanges hwriter IRanges RColorBrewer Rsamtools S4Vectors statmod stringr SummarizedExperiment]; };
 259   DEqMS = derive2 { name="DEqMS"; version="1.14.0"; sha256="04b35mhsz87dfj53clgxrb7igkyv41hqmblb4429l68l55wsxhp6"; depends=[ggplot2 limma matrixStats]; };
 260   DEsingle = derive2 { name="DEsingle"; version="1.16.0"; sha256="0gw2zbq910jnn1pdpc5sgvvfmvg06hximz1qnvvmv9pb8g68r0zk"; depends=[bbmle BiocParallel gamlss MASS Matrix maxLik pscl VGAM]; };
 261   DEsubs = derive2 { name="DEsubs"; version="1.22.0"; sha256="06vjby0wpaczaw9bj2g2inylfnw92acrqgpadr70q458v1kpshs5"; depends=[circlize DESeq2 EBSeq edgeR ggplot2 graph igraph jsonlite limma locfit Matrix NBPSeq pheatmap RBGL]; };
 262   DExMA = derive2 { name="DExMA"; version="1.4.5"; sha256="08pxd01x829v6a20y2lvdsbmhq2as1c5pnsyzcjbpmb3d73aad70"; depends=[Biobase bnstruct DExMAdata GEOquery impute limma pheatmap plyr RColorBrewer scales snpStats sva swamp]; };
 263   DFP = derive2 { name="DFP"; version="1.54.0"; sha256="19xjvfymjclnd0ck7n7al3f54s7f8z3aszi35i0cavr7xj3cgrj5"; depends=[Biobase]; };
 264   DIAlignR = derive2 { name="DIAlignR"; version="2.4.0"; sha256="0mh27n8vsnsv10mq8jcslspyq86sfvwwgn8iib5w3f7qb47w5d7r"; depends=[ape bit64 data_table DBI dplyr ggplot2 magrittr mzR phangorn pracma Rcpp RcppEigen reticulate rlang RMSNumpress RSQLite signal tidyr zoo]; };
 265   DMCFB = derive2 { name="DMCFB"; version="1.10.0"; sha256="0wka5s820k0vfw87dfycnkbr3c41wm4rmylwnkm8c0azjda8n126"; depends=[arm benchmarkme BiocParallel data_table fastDummies GenomicRanges IRanges MASS matrixStats rtracklayer S4Vectors speedglm SummarizedExperiment tibble]; };
 266   DMCHMM = derive2 { name="DMCHMM"; version="1.18.0"; sha256="146b7568ckgcwg1r7gh6802vbfnha8a2b0kssxa4hf8vfd61a7mj"; depends=[BiocParallel calibrate fdrtool GenomicRanges IRanges multcomp rtracklayer S4Vectors SummarizedExperiment]; };
 267   DMRScan = derive2 { name="DMRScan"; version="1.18.0"; sha256="0gmfmmg7hs4qkinkypcxnk5ixylz47hb0z5x9pyd7jx3pldpld3m"; depends=[GenomeInfoDb GenomicRanges IRanges MASS Matrix mvtnorm RcppRoll]; };
 268   DMRcaller = derive2 { name="DMRcaller"; version="1.28.0"; sha256="12rdw3l2vjms6z9n7nlljnaf91hkfcvyv3f1vjsxkdvl91kj6arn"; depends=[betareg GenomicRanges IRanges Rcpp RcppRoll S4Vectors]; };
 269   DMRcate = derive2 { name="DMRcate"; version="2.10.0"; sha256="0l0fz89x1nxjszsdz9zdqrdz8jn9w22c3fasz3ach75fawfdznjv"; depends=[bsseq DSS edgeR ExperimentHub GenomeInfoDb GenomicRanges Gviz IRanges limma minfi missMethyl plyr S4Vectors SummarizedExperiment]; };
 270   DMRforPairs = derive2 { name="DMRforPairs"; version="1.32.0"; sha256="14z01pnvg3v15cmdgrb216hc7yz2wkpb6dqj7a4bsrfqpbjy021s"; depends=[GenomicRanges Gviz R2HTML]; };
 271   DNABarcodeCompatibility = derive2 { name="DNABarcodeCompatibility"; version="1.12.0"; sha256="07q6grnzpb5mmqidkd6dv95jflvxzzzvdyw5591is05px7if96q4"; depends=[DNABarcodes dplyr numbers purrr stringr tidyr]; };
 272   DNABarcodes = derive2 { name="DNABarcodes"; version="1.26.0"; sha256="0n2qlvpcjhrxr3br27gz9vhwcpf7sn6g4xdjazvvi3gqcgk90xc6"; depends=[BH Matrix Rcpp]; };
 273   DNAcopy = derive2 { name="DNAcopy"; version="1.70.0"; sha256="10bh4p8nbl84rfngsm3bi9w542m159kff95f8c2hvjcxv5yw7iwc"; depends=[]; };
 274   DNAshapeR = derive2 { name="DNAshapeR"; version="1.24.0"; sha256="0qayysdkifa7dpin6a64zqp0mfvfxj2z0g1vcp757jci2w903b6g"; depends=[Biostrings fields GenomicRanges Rcpp]; };
 275   DOSE = derive2 { name="DOSE"; version="3.22.1"; sha256="1mch26kddrhhzgi4bssnyy7bvdhprrncmvxl6zn1cq7g07p5765i"; depends=[AnnotationDbi BiocParallel DO_db fgsea ggplot2 GOSemSim qvalue reshape2]; };
 276   DRIMSeq = derive2 { name="DRIMSeq"; version="1.24.0"; sha256="1dph483ij43ayw0z5dbnp6gwp53ka7k5si1hp3miac7z8dqzv94l"; depends=[BiocGenerics BiocParallel edgeR GenomicRanges ggplot2 IRanges limma MASS reshape2 S4Vectors]; };
 277   DSS = derive2 { name="DSS"; version="2.44.0"; sha256="12l5b3h9jd2ld6g4vncxy70a8vfi37byl5k85ix61ir0rbcqf6jn"; depends=[Biobase BiocParallel bsseq matrixStats]; };
 278   DTA = derive2 { name="DTA"; version="2.42.0"; sha256="13x7z2zgxcnz8lpgdnsm5rp6j8yj6fkm03amymlnzihrqjdjpzw4"; depends=[LSD scatterplot3d]; };
 279   DaMiRseq = derive2 { name="DaMiRseq"; version="2.8.0"; sha256="1lyj8ic87bh8bwwm64rc5wj6sargf81x4x8bilff0gisq35w981g"; depends=[arm caret corrplot DESeq2 e1071 EDASeq edgeR FactoMineR FSelector ggplot2 Hmisc ineq kknn limma lubridate MASS pheatmap pls plsVarSel plyr randomForest RColorBrewer reshape2 RSNNS SummarizedExperiment sva]; };
 280   DeMAND = derive2 { name="DeMAND"; version="1.26.0"; sha256="0dwn6p24gc4ix8258w8xvc32ldhh6w3q4drzmm7nwacfk9rjqi93"; depends=[KernSmooth]; };
 281   DeMixT = derive2 { name="DeMixT"; version="1.12.0"; sha256="11x6s6dsnh05l853218b2528adjdy4pbgf95jclibz9gx5nf4hnf"; depends=[base64enc ggplot2 KernSmooth knitr matrixcalc matrixStats Rcpp rmarkdown SummarizedExperiment truncdist]; };
 282   DeconRNASeq = derive2 { name="DeconRNASeq"; version="1.38.0"; sha256="10smk88srxm58hli0fhkdfd6l5z02q58xc9mww39gkn71y0127k6"; depends=[ggplot2 limSolve pcaMethods]; };
 283   DeepBlueR = derive2 { name="DeepBlueR"; version="1.22.0"; sha256="19mxag9pzaa4bsh9plq4zrky3fpai6rangi01p6yrkxpjnnhrwqq"; depends=[data_table diffr dplyr filehash foreach GenomeInfoDb GenomicRanges R_utils RCurl rjson rtracklayer settings stringr withr XML]; };
 284   DeepPINCS = derive2 { name="DeepPINCS"; version="1.4.0"; sha256="06kxdw1cl2i3jqyfsk3cxppdhqcdmqqfisqn7pyidacjwjm16rvg"; depends=[CatEncoders keras matlab PRROC purrr rcdk reticulate stringdist tensorflow tokenizers ttgsea webchem]; };
 285   DegNorm = derive2 { name="DegNorm"; version="1.6.1"; sha256="0332mw9b0qvrnsvshjpcznglz406dqk44l7mjcrb1995ddld3221"; depends=[data_table doParallel foreach GenomicAlignments GenomicFeatures GenomicRanges ggplot2 heatmaply IRanges plotly plyr Rcpp RcppArmadillo Rsamtools S4Vectors viridis]; };
 286   DelayedArray = derive2 { name="DelayedArray"; version="0.22.0"; sha256="11id63qza9dxl1364gllqafxmx25a0q22jv5q8h709bgc3f0grqy"; depends=[BiocGenerics IRanges Matrix MatrixGenerics S4Vectors]; };
 287   DelayedDataFrame = derive2 { name="DelayedDataFrame"; version="1.12.0"; sha256="1nja5h0vxl2i34dhag7gyjdhyaisqagn11004i65pwbx5fmwq58d"; depends=[BiocGenerics DelayedArray S4Vectors]; };
 288   DelayedMatrixStats = derive2 { name="DelayedMatrixStats"; version="1.18.2"; sha256="0zc7560d5lizkfai7yf4is246mjw8n5j2wrrikrrv3fabby44h7x"; depends=[DelayedArray IRanges Matrix MatrixGenerics matrixStats S4Vectors sparseMatrixStats]; };
 289   DelayedRandomArray = derive2 { name="DelayedRandomArray"; version="1.4.0"; sha256="13g4dfsv4d5fdp8flxy7p7sc5l9jiby97zixpkda8q1smg2ggr93"; depends=[BH DelayedArray dqrng Rcpp]; };
 290   DelayedTensor = derive2 { name="DelayedTensor"; version="1.2.0"; sha256="1paciar5cm61gx894awwxb7gzqnyiwmsfinfijff2qx210l0yz51"; depends=[BiocSingular DelayedArray DelayedRandomArray einsum HDF5Array irlba Matrix rTensor]; };
 291   DepInfeR = derive2 { name="DepInfeR"; version="1.0.0"; sha256="03qvgk20dgxa95gkv2ya2dibiwshda3ssl5f95x5nn06lfgzk6m0"; depends=[BiocParallel glmnet matrixStats]; };
 292   DepecheR = derive2 { name="DepecheR"; version="1.12.0"; sha256="0rixczdds5gpac50wap6s68kmpdj4208l38gcihkrysz5frbvqjp"; depends=[beanplot doSNOW dplyr FNN foreach ggplot2 gmodels gplots MASS matrixStats mixOmics moments Rcpp RcppEigen reshape2 robustbase viridis]; };
 293   DiffBind = derive2 { name="DiffBind"; version="3.6.5"; sha256="1c82szcbbai9yldzby90p0q7qi4n9g1wd2wl7h4imyqyj2n4yagx"; depends=[amap apeglm ashr BiocParallel DESeq2 dplyr GenomicAlignments GenomicRanges ggplot2 ggrepel gplots GreyListChIP IRanges lattice limma locfit RColorBrewer Rcpp Rhtslib Rsamtools S4Vectors SummarizedExperiment systemPipeR]; };
 294   DiffLogo = derive2 { name="DiffLogo"; version="2.20.0"; sha256="08dr3ah0gakdkv133ipw1ib2w1p84hild0s4y9kp8z51qg0zk7mn"; depends=[cba]; };
 295   DifferentialRegulation = derive2 { name="DifferentialRegulation"; version="1.0.7"; sha256="1q33zyhqc0dxfip5pcn4m5rvr4nivzic4wshdh8sk1hwpviwd90r"; depends=[BANDITS data_table doParallel doRNG foreach ggplot2 MASS Matrix Rcpp RcppArmadillo SingleCellExperiment SummarizedExperiment]; };
 296   Dino = derive2 { name="Dino"; version="1.2.0"; sha256="1rcll2y034v1n183v819brazr6crr73klp8qmkq51p7jpsvx1450"; depends=[BiocParallel BiocSingular Matrix matrixStats S4Vectors scran Seurat SingleCellExperiment SummarizedExperiment]; };
 297   Director = derive2 { name="Director"; version="1.22.0"; sha256="1s6yg90ai37cvkqq7gs394bxd70l85mgz36y6gyjv1bzbc298am8"; depends=[htmltools]; };
 298   DirichletMultinomial = derive2 { name="DirichletMultinomial"; version="1.38.0"; sha256="15l0h2qz80lmrm5rva3v7lkgddn42igyxxwims57zwpwyhrk9bmx"; depends=[BiocGenerics IRanges S4Vectors]; };
 299   DiscoRhythm = derive2 { name="DiscoRhythm"; version="1.12.0"; sha256="1ld3515clkmxnwyn3z44n7h1bsk3qyxlf0v0fybv5k78rmkrjamv"; depends=[BiocGenerics BiocStyle broom data_table dplyr DT ggExtra ggplot2 gridExtra heatmaply kableExtra knitr magick matrixStats matrixTests MetaCycle plotly reshape2 rmarkdown S4Vectors shiny shinyBS shinycssloaders shinydashboard shinyjs SummarizedExperiment UpSetR VennDiagram viridis zip]; };
 300   DominoEffect = derive2 { name="DominoEffect"; version="1.16.0"; sha256="0iyd3my4kqs2cj284gym59ldq49jhga67z95qwsh1kyjapqiqjz9"; depends=[AnnotationDbi biomaRt Biostrings data_table GenomeInfoDb GenomicRanges IRanges SummarizedExperiment VariantAnnotation]; };
 301   Doscheda = derive2 { name="Doscheda"; version="1.18.0"; sha256="116s7s81yxkc0igfy79fqbn6wn1mvd73c5qx1g86vc1mss3nw7k0"; depends=[affy calibrate corrgram drc DT ggplot2 gridExtra httr jsonlite limma matrixStats prodlim readxl reshape2 shiny shinydashboard stringr vsn]; };
 302   DriverNet = derive2 { name="DriverNet"; version="1.36.0"; sha256="0lpcmx02xnmxrnkwssjgb9pd7jmshkpqslama920d905lrxydp9c"; depends=[]; };
 303   DropletUtils = derive2 { name="DropletUtils"; version="1.16.0"; sha256="1zq8yhix70a63piffia228zbia9nrzv85lga77flix4p836qmcww"; depends=[beachmat BH BiocGenerics BiocParallel DelayedArray DelayedMatrixStats dqrng edgeR GenomicRanges HDF5Array IRanges Matrix R_utils Rcpp rhdf5 Rhdf5lib S4Vectors scuttle SingleCellExperiment SummarizedExperiment]; };
 304   DrugVsDisease = derive2 { name="DrugVsDisease"; version="2.38.0"; sha256="0q1k4pjfl7nvb1g97iraqfan59idwwp0775ndk99qv8lcmnn032h"; depends=[affy annotate ArrayExpress BiocGenerics biomaRt cMap2data DrugVsDiseasedata GEOquery hgu133a_db hgu133a2_db hgu133plus2_db limma qvalue RUnit xtable]; };
 305   Dune = derive2 { name="Dune"; version="1.8.0"; sha256="0xbhbjjhh82k7vblb3b2afxyiqqi17l225zwsycjqpvb2bqpybpc"; depends=[aricode BiocParallel dplyr gganimate ggplot2 magrittr purrr RColorBrewer SummarizedExperiment tidyr]; };
 306   DynDoc = derive2 { name="DynDoc"; version="1.74.0"; sha256="0yqidldl1n93wcdr7n6k18hy602r04b2plkblcvbvi0rlpwcggxi"; depends=[]; };
 307   EBImage = derive2 { name="EBImage"; version="4.38.0"; sha256="1vcx45bw36k9daw9dywj5bz77jmqk4gjfwsym8ajjnc1jmlq20si"; depends=[abind BiocGenerics fftwtools htmltools htmlwidgets jpeg locfit png RCurl tiff]; };
 308   EBSEA = derive2 { name="EBSEA"; version="1.24.0"; sha256="104534fl41p9qwi2md78prw4wdzd0c309j3pvq225z4n38fzs8gp"; depends=[DESeq2 EmpiricalBrownsMethod]; };
 309   EBSeq = derive2 { name="EBSeq"; version="1.36.0"; sha256="192xl9fwsh04w563yk33mfl303d1kqby2ssbqkckqsdr4jb7d57y"; depends=[blockmodeling gplots testthat]; };
 310   EBSeqHMM = derive2 { name="EBSeqHMM"; version="1.30.0"; sha256="0530imykm1lpisa1ksmw5kdndjxcnj2nyvca6zpjfqw3wdj0s24q"; depends=[EBSeq]; };
 311   EBarrays = derive2 { name="EBarrays"; version="2.60.0"; sha256="027zarnpxpdnyl877swp5ypxj7zvq0cjp2q2xs6g6yn5dpqjvxxk"; depends=[Biobase cluster lattice]; };
 312   EBcoexpress = derive2 { name="EBcoexpress"; version="1.40.0"; sha256="07rkar9yh06z3i7v4din5bwpy34a01xdj78sm3r4k64z4xh4zglp"; depends=[EBarrays mclust minqa]; };
 313   EDASeq = derive2 { name="EDASeq"; version="2.30.0"; sha256="1qnpbmhxvqsma7ihi6yp3ad962xcanlxald84k2szh011ipxj7ws"; depends=[AnnotationDbi aroma_light Biobase BiocGenerics BiocManager biomaRt Biostrings GenomicFeatures GenomicRanges IRanges Rsamtools ShortRead]; };
 314   EGAD = derive2 { name="EGAD"; version="1.24.0"; sha256="1w8pfkb9capppb3m2fhhy84s1aghf5vp90zlmlnb0mmvxcs6i7im"; depends=[Biobase GEOquery gplots igraph impute limma MASS plyr RColorBrewer RCurl zoo]; };
 315   EGSEA = derive2 { name="EGSEA"; version="1.24.0"; sha256="09z5247djg4yif8kvkzqady85r7k7xnls7n3hmpjld6rxb00qyrn"; depends=[AnnotationDbi Biobase DT edgeR EGSEAdata gage ggplot2 globaltest gplots GSVA HTMLUtils htmlwidgets hwriter limma metap org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db PADOG pathview plotly RColorBrewer safe stringi topGO]; };
 316   ELMER = derive2 { name="ELMER"; version="2.20.0"; sha256="1zffwm9m7mixnfc912f0g4qvnzljr9d13zrfg7c38p35qlkdi2wp"; depends=[biomaRt circlize ComplexHeatmap DelayedArray doParallel downloader dplyr ELMER_data GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggpubr ggrepel gridExtra Gviz IRanges lattice magrittr Matrix MultiAssayExperiment plotly plyr progress purrr readr reshape reshape2 rmarkdown rtracklayer rvest S4Vectors scales stringr SummarizedExperiment TCGAbiolinks tibble tidyr xml2]; };
 317   EMDomics = derive2 { name="EMDomics"; version="2.26.0"; sha256="14mn3p3mq0hcgr5ynf2jq09y7y1sykcq86hpsnbhgq56gf2v3gzg"; depends=[BiocParallel CDFt emdist ggplot2 matrixStats preprocessCore]; };
 318   ENmix = derive2 { name="ENmix"; version="1.32.0"; sha256="09lznn1ajlpn3rr9gcs9v8c370cdk1gcfjpb1cmp68gc22333ql7"; depends=[AnnotationHub Biobase doParallel dynamicTreeCut ExperimentHub foreach genefilter geneplotter gplots gtools illuminaio impute IRanges matrixStats minfi preprocessCore quadprog RPMM S4Vectors SummarizedExperiment]; };
 319   ERSSA = derive2 { name="ERSSA"; version="1.14.0"; sha256="0g06svlww704z65jk9w747gs8jv6h75b9d096an0qi5zqp2s1lh4"; depends=[BiocParallel DESeq2 edgeR ggplot2 plyr RColorBrewer]; };
 320   EWCE = derive2 { name="EWCE"; version="1.4.0"; sha256="19mq43s0rfzgy793cf7l5a4vgss3s2l0nhnsfgdsrxv4gy6nfgnq"; depends=[BiocParallel data_table DelayedArray dplyr ewceData ggplot2 HGNChelper limma Matrix orthogene reshape2 RNOmni SingleCellExperiment stringr SummarizedExperiment]; };
 321   EmpiricalBrownsMethod = derive2 { name="EmpiricalBrownsMethod"; version="1.24.0"; sha256="04r9fcxaqajhzdbjhi9dhv8pppqlprc0g5h2spf0d798if51f2ck"; depends=[]; };
 322   EnMCB = derive2 { name="EnMCB"; version="1.8.2"; sha256="1kna7s4rz5mlaj7vwc0mrzaziadvai7zq8ajiy4jya8xw78llyw4"; depends=[BiocFileCache boot e1071 ggplot2 glmnet igraph Matrix mboost rms survival survivalROC survivalsvm]; };
 323   EnhancedVolcano = derive2 { name="EnhancedVolcano"; version="1.14.0"; sha256="1ghsmfyhb2wa6vm5zhpjxcbmlnwhccahjajgpccbn85lq2203lz2"; depends=[ggplot2 ggrepel]; };
 324   EnrichedHeatmap = derive2 { name="EnrichedHeatmap"; version="1.26.0"; sha256="1960amh4pwnim6didgjqp6f3456ddndcsz2ghvpc0pv8v832phnl"; depends=[circlize ComplexHeatmap GenomicRanges GetoptLong IRanges locfit matrixStats Rcpp]; };
 325   EnrichmentBrowser = derive2 { name="EnrichmentBrowser"; version="2.26.0"; sha256="1bqq2jhlqm1vykrlr65z7yrvai406wymhrz0kallyhvgqwjbzwl3"; depends=[AnnotationDbi BiocFileCache BiocManager edgeR GO_db graph graphite GSEABase hwriter KEGGgraph KEGGREST limma pathview Rgraphviz S4Vectors safe SPIA SummarizedExperiment]; };
 326   EpiCompare = derive2 { name="EpiCompare"; version="1.0.0"; sha256="0ca4xh0slzhdbji5ffqgjvd9vgaypmgl412vksc8n1jg6q7zx0xm"; depends=[AnnotationHub BRGenomics ChIPseeker clusterProfiler dplyr genomation GenomicRanges ggplot2 IRanges magrittr org_Hs_eg_db plotly plyranges reshape2 rmarkdown rtracklayer S4Vectors stringr tidyr UpSetR]; };
 327   EpiDISH = derive2 { name="EpiDISH"; version="2.12.0"; sha256="020jimk1qy6r62z6pibsi9nyjxpfw0ikn1h136pn13b42rrrmjk4"; depends=[e1071 locfdr MASS Matrix matrixStats quadprog stringr]; };
 328   EpiTxDb = derive2 { name="EpiTxDb"; version="1.8.0"; sha256="12xa3h1j7jp1h27dz7hqfsbx3h4p76r5fm1bvspf52w8823qwpds"; depends=[AnnotationDbi BiocFileCache BiocGenerics Biostrings curl DBI GenomeInfoDb GenomicFeatures GenomicRanges httr IRanges Modstrings RSQLite S4Vectors tRNAdbImport xml2]; };
 329   EventPointer = derive2 { name="EventPointer"; version="3.4.1"; sha256="0fykvpbi4jr9j5xkbia7gj7yq3xf2nfahasa44i4yswqr7d82bbl"; depends=[abind affxparser Biostrings BSgenome cobs doParallel fgsea foreach GenomeInfoDb GenomicFeatures GenomicRanges glmnet graph igraph IRanges iterators limma lpSolve MASS Matrix matrixStats nnls poibin prodlim qvalue RBGL rhdf5 S4Vectors SGSeq speedglm stringr SummarizedExperiment tximport]; };
 330   ExCluster = derive2 { name="ExCluster"; version="1.14.0"; sha256="1vxkhll9zmv4w13xhazhmpbfjsc47g4sz2hizci491hyh41yq4jx"; depends=[GenomicRanges IRanges matrixStats Rsubread rtracklayer]; };
 331   ExiMiR = derive2 { name="ExiMiR"; version="2.38.0"; sha256="06k8f62c9ssbmqgx2gyxhy5cx8mryx3d5mzrwjlq35jbnnvdqn8c"; depends=[affy affyio Biobase limma preprocessCore]; };
 332   ExperimentHub = derive2 { name="ExperimentHub"; version="2.4.0"; sha256="11hna8vrm1az1zk7pw2dv0wh84sd0hw2bi55w40hqvs36csb7lkl"; depends=[AnnotationHub BiocFileCache BiocGenerics BiocManager curl rappdirs S4Vectors]; };
 333   ExperimentHubData = derive2 { name="ExperimentHubData"; version="1.22.0"; sha256="07n2igb5sva2l323d7p1xqd7520a4fpfan4y5q0l2nr8f3azgfdy"; depends=[AnnotationHubData BiocGenerics BiocManager curl DBI ExperimentHub httr S4Vectors]; };
 334   ExperimentSubset = derive2 { name="ExperimentSubset"; version="1.6.0"; sha256="0j4qhqpgh925yjgc2cbrqh0vfc0wih4hvva4645cwmrd3hb09hzf"; depends=[Matrix S4Vectors SingleCellExperiment SpatialExperiment SummarizedExperiment TreeSummarizedExperiment]; };
 335   ExploreModelMatrix = derive2 { name="ExploreModelMatrix"; version="1.8.0"; sha256="152m93d0z4z5wksfbizly7dsr7v9a6c4qar540swcr4qba39p6mm"; depends=[cowplot dplyr DT ggplot2 limma magrittr MASS rintrojs S4Vectors scales shiny shinydashboard shinyjs tibble tidyr]; };
 336   ExpressionAtlas = derive2 { name="ExpressionAtlas"; version="1.24.0"; sha256="0m9hjxdlndr00zqv8xh817n9bnf49smgdw0jc48i6rlmpnr3namx"; depends=[Biobase httr limma S4Vectors SummarizedExperiment XML xml2]; };
 337   FCBF = derive2 { name="FCBF"; version="2.4.0"; sha256="0kymmx151f0n42h6b8m07y3fir95a29bf76hskkbix18x62ak570"; depends=[ggplot2 gridExtra mclust pbapply SummarizedExperiment]; };
 338   FEAST = derive2 { name="FEAST"; version="1.4.0"; sha256="050m7l8wm5c9gzj5m9pd472l29affj5zzwgnjscb4gi9albhbs1r"; depends=[BiocParallel irlba matrixStats mclust SC3 SingleCellExperiment SummarizedExperiment TSCAN]; };
 339   FELLA = derive2 { name="FELLA"; version="1.16.0"; sha256="0j7h8xaxa0wkpbfwq17qgsp3rn45fkjv4fc3ca01y1kvj219a3vw"; depends=[igraph KEGGREST Matrix plyr]; };
 340   FGNet = derive2 { name="FGNet"; version="3.30.0"; sha256="10v82y7gmxxq1drw1w51r175ada5igy1ixj2m6y6kk8xldiy1ngr"; depends=[hwriter igraph plotrix png R_utils RColorBrewer reshape2 XML]; };
 341   FISHalyseR = derive2 { name="FISHalyseR"; version="1.30.0"; sha256="12qrqh9xm3zd2wlkda4n3h4v057hq3bgqzz8z25wnhxil6qyqb43"; depends=[abind EBImage]; };
 342   FLAMES = derive2 { name="FLAMES"; version="1.2.2"; sha256="1dk1pc3vhk2jgmmhkq9q0jy1s1ad5zxzgmnr6nx3x7wbaibb5rp2"; depends=[bambu basilisk BiocGenerics Biostrings circlize ComplexHeatmap cowplot dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 gridExtra igraph magrittr Matrix RColorBrewer Rcpp reticulate Rhtslib Rsamtools rtracklayer S4Vectors scater scran scuttle SingleCellExperiment stringr SummarizedExperiment tidyr withr zlibbioc]; };
 343   FRASER = derive2 { name="FRASER"; version="1.8.1"; sha256="1bixarfx0ykzns4w5c556l8q2lscnxmmdbl292g9q7k9qiw39p03"; depends=[AnnotationDbi BBmisc Biobase BiocGenerics BiocParallel biomaRt BSgenome cowplot data_table DelayedArray DelayedMatrixStats extraDistr generics GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 ggrepel HDF5Array IRanges matrixStats OUTRIDER pcaMethods pheatmap plotly PRROC R_utils RColorBrewer Rcpp RcppArmadillo rhdf5 Rsamtools Rsubread S4Vectors SummarizedExperiment tibble VGAM]; };
 344   FRGEpistasis = derive2 { name="FRGEpistasis"; version="1.32.0"; sha256="14wskfc350zrna1ng8wkyb91y3h01jhk93ajw3if04nkghav193a"; depends=[fda MASS]; };
 345   FScanR = derive2 { name="FScanR"; version="1.6.0"; sha256="0117fgbmig6zaik5j7axcw33rx2pjwhgla751sr4zi990a9p6igb"; depends=[]; };
 346   FamAgg = derive2 { name="FamAgg"; version="1.24.0"; sha256="0pzqy8rx7hyz93v8gh4qf861axwidxwiv3w9i8j7g796mdmy66my"; depends=[BiocGenerics gap igraph kinship2 Matrix survey]; };
 347   FastqCleaner = derive2 { name="FastqCleaner"; version="1.14.2"; sha256="0vna7kmfgn6m0irrp7aqgvswvfmxcd8bjpl6l35mwqq2rm8h25gf"; depends=[Biostrings DT htmltools IRanges Rcpp S4Vectors shiny shinyBS ShortRead]; };
 348   FilterFFPE = derive2 { name="FilterFFPE"; version="1.6.0"; sha256="0x76a382lw0j06h8hlq2vrawnydjngn9w0dhymyrx94jkmsl15wl"; depends=[doParallel foreach GenomicRanges IRanges Rsamtools S4Vectors]; };
 349   FindIT2 = derive2 { name="FindIT2"; version="1.2.3"; sha256="0fj6csbxx6dfcd8fhsiff04cagb2yyg79h8wklqqm0dr7agbfaj9"; depends=[BiocGenerics BiocParallel dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggrepel glmnet IRanges MultiAssayExperiment patchwork progress purrr qvalue rlang rtracklayer S4Vectors stringr SummarizedExperiment tibble tidyr withr]; };
 350   FitHiC = derive2 { name="FitHiC"; version="1.22.0"; sha256="0iv14yx3g7shzl8qrjknyxbmiylj51sbd1wzr1ff9lc5shgl55kq"; depends=[data_table fdrtool Rcpp]; };
 351   FlowSOM = derive2 { name="FlowSOM"; version="2.4.0"; sha256="0balsds5mm981cqamdjv3ndq1y9arharisd6f2lrpkzgvwawa645"; depends=[BiocGenerics colorRamps ConsensusClusterPlus CytoML dplyr flowCore flowWorkspace ggforce ggnewscale ggplot2 ggpointdensity ggpubr ggrepel igraph magrittr pheatmap RColorBrewer rlang Rtsne scattermore tidyr XML]; };
 352   FoldGO = derive2 { name="FoldGO"; version="1.14.0"; sha256="1dwdppgawgc22qryc98p3ibamcn90871hgix1ad0p3zyhpvza9z5"; depends=[ggplot2 tidyr topGO]; };
 353   FunChIP = derive2 { name="FunChIP"; version="1.22.0"; sha256="1cc6yxizb8jxfin1pl0lxf6x0yxwvi0lr1pyg1v8a0842dv3zh1d"; depends=[doParallel fda foreach GenomeInfoDb GenomicAlignments GenomicRanges RColorBrewer Rcpp Rsamtools shiny]; };
 354   GA4GHclient = derive2 { name="GA4GHclient"; version="1.20.0"; sha256="0mg6c1ygj732dpcqbv3ndh58z66msy7bp1rq95d3inj57ccw5fpf"; depends=[BiocGenerics Biostrings dplyr GenomeInfoDb GenomicRanges httr IRanges jsonlite S4Vectors VariantAnnotation]; };
 355   GA4GHshiny = derive2 { name="GA4GHshiny"; version="1.18.0"; sha256="1gpls1wpd4rdhkwwmm81pv06sj2w6ravcsns2rgqaa4sp2pdsb8a"; depends=[AnnotationDbi BiocGenerics dplyr DT GA4GHclient GenomeInfoDb GenomicFeatures openxlsx purrr S4Vectors shiny shinyjs shinythemes tidyr]; };
 356   GAPGOM = derive2 { name="GAPGOM"; version="1.11.0"; sha256="0sl97w5zx4zdrdbcwayqyvgxspaxpbils3mpsrim0zlspjrjcy6z"; depends=[AnnotationDbi Biobase BiocFileCache data_table dplyr fastmatch GEOquery GO_db GOSemSim graph igraph magrittr Matrix matrixStats org_Hs_eg_db org_Mm_eg_db plyr RBGL]; };
 357   GARS = derive2 { name="GARS"; version="1.16.0"; sha256="1v3ps3v2zsr4p2q5wvxa1wm9mnxkhc2d9sgsz841ld0rbqzw7fjl"; depends=[cluster DaMiRseq ggplot2 MLSeq SummarizedExperiment]; };
 358   GAprediction = derive2 { name="GAprediction"; version="1.22.0"; sha256="08xhky97f5x6kakdavzpqdxp053nrjfjr51r4gkfvcv4xj4dypk0"; depends=[glmnet Matrix]; };
 359   GBScleanR = derive2 { name="GBScleanR"; version="1.0.6"; sha256="01wk8d1kbs7x26i2anxh8pjsvc9arr6b64qy4zzr32kwmlj0yvg7"; depends=[expm gdsfmt ggplot2 Rcpp RcppParallel SeqArray tidyr]; };
 360   GCSConnection = derive2 { name="GCSConnection"; version="1.7.0"; sha256="1psmw3825whyzvbzqpqksgcl09b6kfyb8k5vny6ljkjbac1jzvnf"; depends=[googleAuthR googleCloudStorageR httr jsonlite Rcpp]; };
 361   GCSFilesystem = derive2 { name="GCSFilesystem"; version="1.6.0"; sha256="0qk8xyg06f71y4r1q1zpcj89irh9i6cd9z6nqlx635x8if84sh6d"; depends=[]; };
 362   GCSscore = derive2 { name="GCSscore"; version="1.10.0"; sha256="0cdhv2awcyg95cjwq088r9rsbmdi3vqnlnh0c74h7k2gjldl9r24"; depends=[affxparser Biobase BiocManager data_table devtools dplR RSQLite stringr]; };
 363   GDCRNATools = derive2 { name="GDCRNATools"; version="1.16.6"; sha256="0zkw0g711g1w0dp75qwa3cfk3d8dfsp6v4f122j88xc1cjf5rarv"; depends=[BiocParallel biomaRt clusterProfiler DESeq2 DOSE DT edgeR GenomicDataCommons ggplot2 gplots jsonlite limma org_Hs_eg_db pathview rjson shiny survival survminer XML]; };
 364   GDSArray = derive2 { name="GDSArray"; version="1.16.0"; sha256="1j6a0xlrx4cjqsfcm1k1vapddi5v2q5h05b617i839l9cp0ggd1s"; depends=[BiocGenerics DelayedArray gdsfmt S4Vectors SeqArray SNPRelate]; };
 365   GEM = derive2 { name="GEM"; version="1.22.0"; sha256="0vxpncvnqhgggy0is4lvgf29lgh307jkgz4zjjspdq9ds6y40l1i"; depends=[ggplot2]; };
 366   GENESIS = derive2 { name="GENESIS"; version="2.26.0"; sha256="1qn3x6j9lvyx130sx9wg7bxvacwbwp87x75inpxx9llc00p7sl9c"; depends=[Biobase BiocGenerics BiocParallel data_table gdsfmt GenomicRanges GWASTools igraph IRanges Matrix reshape2 S4Vectors SeqArray SeqVarTools SNPRelate]; };
 367   GENIE3 = derive2 { name="GENIE3"; version="1.18.0"; sha256="0h3vnpnznb9rda8gfwp4cnd2mqsvs1vzmfx90dchn5pqaphz1k2l"; depends=[dplyr reshape2]; };
 368   GEOexplorer = derive2 { name="GEOexplorer"; version="1.2.0"; sha256="00lnrp07nv8hia77riy3p10iq5rsyjzlrq93l4ql6m2cxv2p4qdg"; depends=[Biobase DT factoextra GEOquery ggplot2 heatmaply htmltools impute limma maptools pheatmap plotly scales shiny shinyBS shinybusy shinyHeatmaply stringr umap]; };
 369   GEOfastq = derive2 { name="GEOfastq"; version="1.4.0"; sha256="05s35fbzi2w3c4y11h144mf70i0rhbx1jwdz70ldyfa0ld3hbh89"; depends=[doParallel foreach plyr RCurl rvest stringr xml2]; };
 370   GEOmetadb = derive2 { name="GEOmetadb"; version="1.58.0"; sha256="12x2aabm2m1rv4s91h6vyq5q36i4i15lgh3bya3bjm80bfmxkfm3"; depends=[GEOquery RSQLite]; };
 371   GEOquery = derive2 { name="GEOquery"; version="2.64.2"; sha256="1cvkvq2haz831qi8w0gd3ayvxfxsl0z5klhki4gkfi9xqdv1gi9x"; depends=[Biobase curl data_table dplyr limma magrittr R_utils readr tidyr xml2]; };
 372   GEOsubmission = derive2 { name="GEOsubmission"; version="1.48.0"; sha256="0ml72djmli9qvq2c75nqq00q31lqcb64v8532vw4fk57cclmf76d"; depends=[affy Biobase]; };
 373   GEWIST = derive2 { name="GEWIST"; version="1.40.0"; sha256="0df1jm69krsr8y315mx93hjnmf4qpvnhbm0iz4j4920ra7g8wdp7"; depends=[car]; };
 374   GGPA = derive2 { name="GGPA"; version="1.8.0"; sha256="08p3k5dfkc2la5j99wbwswd7zhc4i4aynkmr3x561h6p59n31hnk"; depends=[GGally matrixStats network Rcpp RcppArmadillo scales sna]; };
 375   GIGSEA = derive2 { name="GIGSEA"; version="1.14.0"; sha256="1v8f3slcx08kcba13aq68y4lmdprz71h33cm7masrcxs2iz839c9"; depends=[locfdr MASS Matrix]; };
 376   GISPA = derive2 { name="GISPA"; version="1.20.0"; sha256="1qpw6fwa15p6ccylb4hjfwjypy0waywp1yiwq3fwhdazg0pbzr9h"; depends=[Biobase changepoint data_table genefilter GSEABase HH lattice latticeExtra plyr scatterplot3d]; };
 377   GLAD = derive2 { name="GLAD"; version="2.60.0"; sha256="02amcicn07ywgmd4dkinw0wq6vi0yx45m0naycfgc6bszh78a05z"; depends=[aws]; };
 378   GMRP = derive2 { name="GMRP"; version="1.24.0"; sha256="0bkz9pj07gn5a2gfci0zl1932mkzcmm5cv9axaa0f8yavn4vy4i5"; depends=[diagram GenomicRanges plotrix]; };
 379   GNET2 = derive2 { name="GNET2"; version="1.12.0"; sha256="1s09cyhhfbi5p9bnp1wgpl94js65sp63z33bf795mm6jv460ibyy"; depends=[DiagrammeR dplyr ggplot2 igraph matrixStats Rcpp reshape2 SummarizedExperiment xgboost]; };
 380   GOSemSim = derive2 { name="GOSemSim"; version="2.22.0"; sha256="1hp15pzd0m0g9f8kglyfsgjqxnvxcmm9022xnsrkzfvmj2yw14vd"; depends=[AnnotationDbi GO_db Rcpp]; };
 381   GOSim = derive2 { name="GOSim"; version="1.34.0"; sha256="0nl5fk7nxmha9sp7phmj9r6mxvg5v0p8l7pblrb34m40h3f27d96"; depends=[annotate AnnotationDbi cluster corpcor flexmix GO_db graph Matrix org_Hs_eg_db RBGL Rcpp topGO]; };
 382   GOTHiC = derive2 { name="GOTHiC"; version="1.32.0"; sha256="0hnwqsa7pgxnmqrcrbn78mr647rzjs004xx2x5bbi9nbpirr04j9"; depends=[BiocGenerics BiocManager Biostrings BSgenome data_table GenomeInfoDb GenomicRanges ggplot2 IRanges Rsamtools rtracklayer S4Vectors ShortRead]; };
 383   GOexpress = derive2 { name="GOexpress"; version="1.30.0"; sha256="164vr6hff42gym2rak37xnpz23d4ga20p67jxzw96bnynnzgaaxw"; depends=[Biobase biomaRt ggplot2 gplots randomForest RColorBrewer RCurl stringr]; };
 384   GOfuncR = derive2 { name="GOfuncR"; version="1.16.0"; sha256="02vdfsjrqp0m06mfbspwkxjyqxfca0w1idgygpi1a9i5m4fqhwpk"; depends=[AnnotationDbi GenomicRanges gtools IRanges mapplots Rcpp vioplot]; };
 385   GOpro = derive2 { name="GOpro"; version="1.22.0"; sha256="04xgfmazi557r5qr9ginbfsqwvccpw7kds7kyvh6xxcy5kgnlbf0"; depends=[AnnotationDbi BH dendextend doParallel foreach GO_db IRanges MultiAssayExperiment org_Hs_eg_db Rcpp S4Vectors]; };
 386   GOstats = derive2 { name="GOstats"; version="2.62.0"; sha256="121ly9vifarg8y7mc468571bbs0xv4sx6sflm5zcdqf0p83yvjrm"; depends=[annotate AnnotationDbi AnnotationForge Biobase Category GO_db graph RBGL Rgraphviz]; };
 387   GOsummaries = derive2 { name="GOsummaries"; version="2.32.0"; sha256="0wkal7hsfz9msf8j7975vkqqzv5x681c891zj1b4mfk6dvn5xffa"; depends=[ggplot2 gProfileR gtable limma plyr Rcpp reshape2]; };
 388   GPA = derive2 { name="GPA"; version="1.8.0"; sha256="0z4qh88x7gvm02186mnl6bkhg1f5swqci30gzj27lj1kx700jsf3"; depends=[DT ggplot2 ggrepel plyr Rcpp shiny shinyBS vegan]; };
 389   GRENITS = derive2 { name="GRENITS"; version="1.48.0"; sha256="09c6d8hcawc6ky0pjhvc5yvd7fj1a1bl8n4hcw72nyfgbf20hygi"; depends=[ggplot2 Rcpp RcppArmadillo reshape2]; };
 390   GRaNIE = derive2 { name="GRaNIE"; version="1.0.7"; sha256="1lvc78fbhbp4i6ix4bdmmlnzwma2n5w0v3099p1nghzwcl0jx7z2"; depends=[BiocFileCache BiocManager BiocParallel Biostrings checkmate circlize colorspace ComplexHeatmap csaw data_table DESeq2 dplyr forcats futile_logger GenomeInfoDb GenomicRanges ggplot2 gridExtra igraph IRanges limma magrittr Matrix matrixStats patchwork progress purrr RColorBrewer readr reshape2 rlang robust S4Vectors scales stringr SummarizedExperiment tibble tidyr tidyselect tidyverse topGO viridis]; };
 391   GRmetrics = derive2 { name="GRmetrics"; version="1.22.0"; sha256="1qz2bj8wnp14mw5zm2207xk3zj98s2gk16fvhdzpy21y07irrx3j"; depends=[drc ggplot2 plotly S4Vectors SummarizedExperiment]; };
 392   GRridge = derive2 { name="GRridge"; version="1.20.0"; sha256="16bra2nz4i4f40x2gfcky7ggz3alpvhwcbilv48r7nv4p6b31j8i"; depends=[glmnet graph Iso mvtnorm penalized survival]; };
 393   GSALightning = derive2 { name="GSALightning"; version="1.24.0"; sha256="0p2k8k05283h7ls1aj5457ycqq46mxjjx7pmjijmj0kfzcmnqyv2"; depends=[data_table Matrix]; };
 394   GSAR = derive2 { name="GSAR"; version="1.30.0"; sha256="0b71l3hlg5zxf6y3yffbl785pprh66z89xx9gz9s2vb5rqkbqydb"; depends=[igraph]; };
 395   GSCA = derive2 { name="GSCA"; version="2.26.0"; sha256="0vrgzp4rc8y0amzjgqv3l77jqpbjgc5qdpijpqfm870fcjp1iqvi"; depends=[ggplot2 gplots RColorBrewer reshape2 rhdf5 shiny sp]; };
 396   GSEABase = derive2 { name="GSEABase"; version="1.58.0"; sha256="1qhvgyg392fd98h2qnmfmhg7mil5hp9cy3qmkqs4x1bhpv1m978g"; depends=[annotate AnnotationDbi Biobase BiocGenerics graph XML]; };
 397   GSEABenchmarkeR = derive2 { name="GSEABenchmarkeR"; version="1.16.0"; sha256="19yvv82c2fvmjzv4rrfv19svsj2dm3pkvg78zjk7vs64y81ph5d7"; depends=[AnnotationDbi AnnotationHub Biobase BiocFileCache BiocParallel edgeR EnrichmentBrowser ExperimentHub KEGGandMetacoreDzPathwaysGEO KEGGdzPathwaysGEO S4Vectors SummarizedExperiment]; };
 398   GSEAlm = derive2 { name="GSEAlm"; version="1.56.0"; sha256="1ybfd6b79bqv3rk986456y9hqmjkgibmpv43q9ivxqz1acyvj6v0"; depends=[Biobase]; };
 399   GSEAmining = derive2 { name="GSEAmining"; version="1.6.0"; sha256="19r923086qr400f4p2kfn4ii09q2k2pqg9k4r035b9afqgd0x91a"; depends=[dendextend dplyr ggplot2 ggwordcloud gridExtra rlang stringr tibble tidytext]; };
 400   GSRI = derive2 { name="GSRI"; version="2.44.0"; sha256="0z79l6m3z0ib9iy24hpiscmxasrx33y6swrdg0k1z48sdhy0gsf1"; depends=[Biobase fdrtool genefilter GSEABase les]; };
 401   GSReg = derive2 { name="GSReg"; version="1.30.0"; sha256="0g0j4bh9h8qvki84gcp2s6yn2hhc38219jzihmf9jpjl66k74gs0"; depends=[AnnotationDbi GenomicFeatures Homo_sapiens org_Hs_eg_db]; };
 402   GSVA = derive2 { name="GSVA"; version="1.44.5"; sha256="09szzrgyjcx33yh2327s8w4xaarvavajsb19jfdgdxc1bs5yhzl9"; depends=[Biobase BiocParallel BiocSingular DelayedArray DelayedMatrixStats GSEABase HDF5Array IRanges Matrix S4Vectors SingleCellExperiment sparseMatrixStats SummarizedExperiment]; };
 403   GSgalgoR = derive2 { name="GSgalgoR"; version="1.6.0"; sha256="1wi6ww5rycc2zxhnm83amzrh7ffripmiqklcmxisv6jqgr64adp3"; depends=[cluster doParallel foreach matchingR nsga2R proxy survival]; };
 404   GUIDEseq = derive2 { name="GUIDEseq"; version="1.26.0"; sha256="1ar20zr3mjfqs7fvd323mdrxylvsjazn6si4d8ilgbpq4xhdv58a"; depends=[BiocGenerics BiocParallel Biostrings BSgenome ChIPpeakAnno CRISPRseek data_table dplyr GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges hash IRanges limma matrixStats Rsamtools S4Vectors]; };
 405   GWAS_BAYES = derive2 { name="GWAS.BAYES"; version="1.6.0"; sha256="01bj6gh95p95imyvvzjylnw42rcrzw3x8z0q8x2cx42zqf45dqc1"; depends=[caret doParallel GA ggplot2 Matrix memoise Rcpp RcppEigen reshape2]; };
 406   GWASTools = derive2 { name="GWASTools"; version="1.42.1"; sha256="0a9k2dsaxp5szqm71qd3l5jq0aqnbgp7w5n8d7qiywlkfw4l8lwm"; depends=[Biobase data_table DBI DNAcopy gdsfmt GWASExactHW lmtest logistf quantsmooth RSQLite sandwich survival]; };
 407   GWENA = derive2 { name="GWENA"; version="1.6.0"; sha256="10cs5csg6dwqajsk461flq55siz6jfd90w5cyqdhyq4mcbv6zp1x"; depends=[cluster dplyr dynamicTreeCut ggplot2 gprofiler2 igraph magrittr matrixStats NetRep purrr RColorBrewer rlist stringr SummarizedExperiment tibble tidyr WGCNA]; };
 408   GateFinder = derive2 { name="GateFinder"; version="1.16.0"; sha256="1wrx3rp1r4fjq8c56dk40izawzpsrmkrrdvivi67arx5pdjhjz30"; depends=[diptest flowCore flowFP mvoutlier splancs]; };
 409   GenProSeq = derive2 { name="GenProSeq"; version="1.0.0"; sha256="0vmsjpdkfvq28bihmf47a2ihlfxzadjr5vm6clh25016rz0086pp"; depends=[CatEncoders DeepPINCS keras mclust reticulate tensorflow ttgsea word2vec]; };
 410   GenVisR = derive2 { name="GenVisR"; version="1.28.0"; sha256="1cr9f044vj4qfb050nsbnnr9bvz12p3fzvnag54na3j2yinvsq6c"; depends=[AnnotationDbi BiocGenerics biomaRt Biostrings BSgenome data_table DBI GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gridExtra gtable gtools IRanges plyr reshape2 Rsamtools scales VariantAnnotation viridis]; };
 411   GeneAccord = derive2 { name="GeneAccord"; version="1.14.0"; sha256="0lpw3fxfwfhnymivvjh6na9ssqs7268543kpf5wximfcm7wy9mzm"; depends=[biomaRt caTools dplyr ggplot2 ggpubr gtools magrittr maxLik RColorBrewer reshape2 tibble]; };
 412   GeneBreak = derive2 { name="GeneBreak"; version="1.26.0"; sha256="0dw5r5zaxp0y2g626gsvwcqcaqf7lz8ajnca6n6k6krbng7nqpf2"; depends=[CGHbase CGHcall GenomicRanges QDNAseq]; };
 413   GeneExpressionSignature = derive2 { name="GeneExpressionSignature"; version="1.42.0"; sha256="0jyxvsqm8gswbv2aky18hz2lc75l2l12yidhkqhv0c0rr3kxqvsv"; depends=[Biobase]; };
 414   GeneGA = derive2 { name="GeneGA"; version="1.46.0"; sha256="1xb7m5rzgycbp1w1wa022ksn5fskkvyh38ndg7a11nfk0lq1mxiw"; depends=[hash seqinr]; };
 415   GeneGeneInteR = derive2 { name="GeneGeneInteR"; version="1.22.0"; sha256="1ccxwdjyk567i78xda40ycnpa9lnln9zc8r9k5njwizj9wma1fzy"; depends=[data_table FactoMineR GenomicRanges igraph IRanges kernlab mvtnorm Rsamtools snpStats]; };
 416   GeneMeta = derive2 { name="GeneMeta"; version="1.68.0"; sha256="1y0d65h40s68gmnw680a2ac1g6kmfh4zbgzff1dblh1k4lvgzir2"; depends=[Biobase genefilter]; };
 417   GeneNetworkBuilder = derive2 { name="GeneNetworkBuilder"; version="1.38.0"; sha256="0yz0p9q3km71lji12p0bqa7zz6rcbrmw2c62im0bnrxmraw1l498"; depends=[graph htmlwidgets plyr Rcpp Rgraphviz rjson XML]; };
 418   GeneOverlap = derive2 { name="GeneOverlap"; version="1.32.0"; sha256="0nqwa3x9q1hl9nm06hqzzrn00rirc9kj6s320csjlf7x6rcidr93"; depends=[gplots RColorBrewer]; };
 419   GeneRegionScan = derive2 { name="GeneRegionScan"; version="1.52.0"; sha256="0qgfjlahc93ijsz7m2i11xmkkkwnzddf4mi17l2cq6a14ykdlww5"; depends=[affxparser Biobase Biostrings RColorBrewer S4Vectors]; };
 420   GeneSelectMMD = derive2 { name="GeneSelectMMD"; version="2.40.0"; sha256="19q88wy0gmyyvc9ddq7dm6mqy5zh8kqpad1dz5ymvzq8663cldqa"; depends=[Biobase limma MASS]; };
 421   GeneStructureTools = derive2 { name="GeneStructureTools"; version="1.16.0"; sha256="1ciflsp0i96ljh4xz1b1bbf6za4hd2swnykmp0wvgayxxcwxdwjv"; depends=[Biostrings BSgenome_Mmusculus_UCSC_mm10 data_table GenomicRanges Gviz IRanges plyr rtracklayer S4Vectors stringdist stringr]; };
 422   GeneTonic = derive2 { name="GeneTonic"; version="2.0.2"; sha256="08mq482px35a1b3cz64h8hlw2s4cabyddb1ly5hzbbgcqq9h18p3"; depends=[AnnotationDbi backbone bs4Dash circlize colorspace colourpicker ComplexHeatmap ComplexUpset dendextend DESeq2 dplyr DT dynamicTreeCut expm ggforce ggplot2 ggrepel GO_db igraph matrixStats plotly RColorBrewer rintrojs rlang rmarkdown S4Vectors scales shiny shinyAce shinycssloaders shinyWidgets SummarizedExperiment tidyr tippy viridis visNetwork]; };
 423   GeneticsPed = derive2 { name="GeneticsPed"; version="1.58.0"; sha256="0vbkbjyb9r5gsbkn3c28y3bicmn82r1bfsah6ww6pf539xzipbzj"; depends=[gdata genetics MASS]; };
 424   GenomeInfoDb = derive2 { name="GenomeInfoDb"; version="1.32.4"; sha256="0z2bqr0zrl3r2kcqs72ny8p1psf8w1sgbr7qjjknxdv1qp8m2j7v"; depends=[BiocGenerics GenomeInfoDbData IRanges RCurl S4Vectors]; };
 425   GenomicAlignments = derive2 { name="GenomicAlignments"; version="1.32.1"; sha256="09pg7822camyav5zvlpv360sj5gz8q1bhk528qa2da2qsz74a3cz"; depends=[BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors SummarizedExperiment]; };
 426   GenomicDataCommons = derive2 { name="GenomicDataCommons"; version="1.20.3"; sha256="09qjy79wvbahwyb2avvagp3pp4d2v3qr2balsjvg75g8j5fsy50f"; depends=[dplyr GenomicRanges httr IRanges jsonlite magrittr rappdirs readr rlang tibble xml2]; };
 427   GenomicDistributions = derive2 { name="GenomicDistributions"; version="1.4.6"; sha256="05q36bbcg2acr93bzcmd6vfxl442ig7rk0d0kmzhp33fbrrz8k3a"; depends=[Biostrings broom data_table dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges plyr reshape2 scales]; };
 428   GenomicFeatures = derive2 { name="GenomicFeatures"; version="1.48.4"; sha256="15kn5lmdqp7rsh2zlixj7ashsqnv50bs36hapw36qbaz9vgvim4v"; depends=[AnnotationDbi Biobase BiocGenerics BiocIO biomaRt Biostrings DBI GenomeInfoDb GenomicRanges IRanges RCurl RSQLite rtracklayer S4Vectors XVector]; };
 429   GenomicFiles = derive2 { name="GenomicFiles"; version="1.32.1"; sha256="06ycfna26klx27vvsnlpgv46bymfrc8z0zkpag7nm4m23153ivkz"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicRanges IRanges MatrixGenerics Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; };
 430   GenomicInteractionNodes = derive2 { name="GenomicInteractionNodes"; version="1.0.0"; sha256="064mvbgrhf098pyqabqdi70yskri5pa3fd1yylzwmabx3g7wvsw8"; depends=[AnnotationDbi GenomeInfoDb GenomicFeatures GenomicRanges GO_db graph IRanges RBGL S4Vectors]; };
 431   GenomicInteractions = derive2 { name="GenomicInteractions"; version="1.30.0"; sha256="0aph1hja5vfprxs3jl4zd1inhvih6m3v1p3jkm6w7xpj3jzvmgbx"; depends=[Biobase BiocGenerics data_table dplyr GenomeInfoDb GenomicRanges ggplot2 gridExtra Gviz igraph InteractionSet IRanges Rsamtools rtracklayer S4Vectors stringr]; };
 432   GenomicOZone = derive2 { name="GenomicOZone"; version="1.10.0"; sha256="1dhrlibbs41rl97rspnn4sc77ic5rv7l23vgm4qmgq37lv1crpdk"; depends=[biomaRt Ckmeans_1d_dp GenomeInfoDb GenomicRanges ggbio ggplot2 gridExtra IRanges lsr plyr Rdpack S4Vectors]; };
 433   GenomicRanges = derive2 { name="GenomicRanges"; version="1.48.0"; sha256="088rv1aclwq265pdg4hmks73nl0125vk0vigyi44n3djkrdx48yn"; depends=[BiocGenerics GenomeInfoDb IRanges S4Vectors XVector]; };
 434   GenomicScores = derive2 { name="GenomicScores"; version="2.8.2"; sha256="12rcxw69an1d5q7ar58xy8s871l47imw2nm08j054ivxslx8597j"; depends=[AnnotationHub Biobase BiocFileCache BiocGenerics BiocManager Biostrings DelayedArray GenomeInfoDb GenomicRanges HDF5Array httr IRanges rhdf5 S4Vectors XML]; };
 435   GenomicSuperSignature = derive2 { name="GenomicSuperSignature"; version="1.4.0"; sha256="09hfb3j1v4b2as4vwy87h5jqi4kzz179k4lzvw4csr0yvs80f3ks"; depends=[Biobase BiocFileCache ComplexHeatmap dplyr flextable ggplot2 ggpubr plotly S4Vectors SummarizedExperiment]; };
 436   GenomicTuples = derive2 { name="GenomicTuples"; version="1.30.0"; sha256="0mjw7vvw28lgb7yrsymnixambnwasq79hfbcc3rw24c0srad6hsw"; depends=[BiocGenerics data_table GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; };
 437   GeoDiff = derive2 { name="GeoDiff"; version="1.2.0"; sha256="0s0bcx6j7varibkv5gwf29kld8znzz0dlbsrip6qxg5w23wwdhcz"; depends=[Biobase GeomxTools lme4 Matrix NanoStringNCTools plyr Rcpp RcppArmadillo robust roptim testthat withr]; };
 438   GeomxTools = derive2 { name="GeomxTools"; version="3.0.1"; sha256="1jj4jsh4z514lkdzd7isfhsg54lr6fkvqacdmizyvbcpiiccgw6v"; depends=[Biobase BiocGenerics data_table dplyr EnvStats GGally ggplot2 lmerTest NanoStringNCTools readxl reshape2 rjson rlang S4Vectors SeuratObject stringr]; };
 439   GladiaTOX = derive2 { name="GladiaTOX"; version="1.12.0"; sha256="15s1qm5519ijr4h2krbfgix1768yb4jjhx9py57px6v6mwg7ahks"; depends=[brew data_table DBI ggplot2 ggrepel numDeriv RColorBrewer RCurl RJSONIO RMySQL RSQLite stringr tidyr XML xtable]; };
 440   Glimma = derive2 { name="Glimma"; version="2.6.0"; sha256="1k17ay09vhb2hakg1vrgvpp1zliavlj7cdkxaal162bc3v8pyvyz"; depends=[DESeq2 edgeR htmlwidgets jsonlite limma S4Vectors SummarizedExperiment]; };
 441   GlobalAncova = derive2 { name="GlobalAncova"; version="4.14.0"; sha256="01w50kl0cfif8d773i4xx70p8wp337fkx6kclxgvrgd7bmv286v4"; depends=[annotate AnnotationDbi Biobase corpcor dendextend globaltest GSEABase VGAM]; };
 442   GmicR = derive2 { name="GmicR"; version="1.10.0"; sha256="02h92xlziqjva283crbgjlffii00bsmbldknzsj38fksjp43dih9"; depends=[AnnotationDbi ape bnlearn Category data_table doParallel DT foreach GOstats gRain gRbase GSEABase org_Hs_eg_db org_Mm_eg_db reshape2 shiny WGCNA]; };
 443   GraphAT = derive2 { name="GraphAT"; version="1.68.0"; sha256="1s5qcykfprqwqbhmlp64yxmjaxskwrxgh93j4idzgp71md1k5sf1"; depends=[graph MCMCpack]; };
 444   GraphAlignment = derive2 { name="GraphAlignment"; version="1.60.0"; sha256="0spjsqb8rx6si5lshk0drlq1h4h5jgb6bmcwdh0wz9755npz0p8m"; depends=[]; };
 445   GraphPAC = derive2 { name="GraphPAC"; version="1.38.0"; sha256="1qrcxcb68bx1kzpilrd61m14902wl490kmzkjj9bv35w20ln1f3h"; depends=[igraph iPAC RMallow TSP]; };
 446   GreyListChIP = derive2 { name="GreyListChIP"; version="1.28.1"; sha256="0w52vwvjarql19bsv40b80yn701qx8c9d0clsjhj85wmzj2p6dhg"; depends=[BSgenome GenomeInfoDb GenomicAlignments GenomicRanges MASS Rsamtools rtracklayer SummarizedExperiment]; };
 447   Guitar = derive2 { name="Guitar"; version="2.12.0"; sha256="09grsasnnk7rmlzjh4lhas9r5spzcsrvmdqj6fx1dk22sckcqahh"; depends=[AnnotationDbi dplyr GenomicFeatures GenomicRanges ggplot2 knitr magrittr rtracklayer]; };
 448   Gviz = derive2 { name="Gviz"; version="1.40.1"; sha256="0as3sxhv21bqqrpvafcqim7798hhkzj3q40hy1rqyhv2lhj4rbvi"; depends=[AnnotationDbi Biobase BiocGenerics biomaRt Biostrings biovizBase BSgenome digest ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges lattice latticeExtra matrixStats RColorBrewer Rsamtools rtracklayer S4Vectors XVector]; };
 449   HDF5Array = derive2 { name="HDF5Array"; version="1.24.2"; sha256="1dzx5463ig3ag72a47slc4jbq5id11w77cj0zgzr85h0dbxklrr9"; depends=[BiocGenerics DelayedArray IRanges Matrix rhdf5 rhdf5filters Rhdf5lib S4Vectors]; };
 450   HDTD = derive2 { name="HDTD"; version="1.30.0"; sha256="084bx1qwlibpd6xna29sb9nfksxa3z4jiz4l3fhkl8n5ww6k33pq"; depends=[Rcpp RcppArmadillo]; };
 451   HELP = derive2 { name="HELP"; version="1.54.0"; sha256="1sk3433d90msi6g0rpvsj8fdvr7isqs7gna409fcya2n4dlgmbs1"; depends=[Biobase]; };
 452   HEM = derive2 { name="HEM"; version="1.68.0"; sha256="1hq6i9rjrlis4fmi6zc06d37562vvv0sbsm4mihyrfmmn87k06wq"; depends=[Biobase]; };
 453   HGC = derive2 { name="HGC"; version="1.4.0"; sha256="1mm6drdslj7f23p9mzy0nlmyvmqafad9hm7nvskm6fv4jwbpg4wv"; depends=[ape dendextend dplyr ggplot2 Matrix mclust patchwork RANN Rcpp RcppEigen]; };
 454   HIBAG = derive2 { name="HIBAG"; version="1.32.0"; sha256="0a9gm7r2f1rfqzc5bviz3z4bfgl5lfzdwjlrc1dca2s6qsb5z01l"; depends=[RcppParallel]; };
 455   HIPPO = derive2 { name="HIPPO"; version="1.8.0"; sha256="0y69bc5557sijzczh2viflxg6wgy380a8jk7d1cqgmqcaqabwzbv"; depends=[dplyr ggplot2 ggrepel gridExtra irlba magrittr Matrix reshape2 rlang Rtsne SingleCellExperiment umap]; };
 456   HIREewas = derive2 { name="HIREewas"; version="1.14.0"; sha256="0gxaki4si2brjjns1fmhkgbrxv6kr5wcrhxx3083cnhdvllpqmzi"; depends=[gplots quadprog]; };
 457   HMMcopy = derive2 { name="HMMcopy"; version="1.38.0"; sha256="0hpb42wxsxyvl2p7l9ml2fnr30fvba54hc8zrl6rqaf9qdhw4c3x"; depends=[data_table]; };
 458   HPAStainR = derive2 { name="HPAStainR"; version="1.6.0"; sha256="1hp5y6ws0zg3qckd2bhhbpcqpzrlggljphqi2xc9fmjpbk2h0hbg"; depends=[data_table dplyr scales shiny stringr tibble tidyr]; };
 459   HPAanalyze = derive2 { name="HPAanalyze"; version="1.14.0"; sha256="0w69qs669l36n287n3dqz3ym81m5ww3191xd6ixrxz4c4jph16d5"; depends=[dplyr ggplot2 gridExtra openxlsx tibble xml2]; };
 460   HPiP = derive2 { name="HPiP"; version="1.2.0"; sha256="19pay1091q5w0kmcx1f2843dm1lk3f7p2nd9ffvgynxg84k873i8"; depends=[caret corrplot dplyr ggplot2 httr igraph magrittr MCL pROC protr PRROC purrr readr stringr tibble tidyr]; };
 461   HTSFilter = derive2 { name="HTSFilter"; version="1.36.0"; sha256="0s47sd83ih69r8m7q4llnscwpljbiraam16mwz29jwij5nqlaa1q"; depends=[Biobase BiocParallel DESeq2 edgeR]; };
 462   HTSeqGenie = derive2 { name="HTSeqGenie"; version="4.25.1"; sha256="0g1qkp8h4cmsisvjkv8qgm6aq4yifkr9bs1rxzlva0hlxlllg5k8"; depends=[BiocGenerics BiocParallel Biostrings Cairo chipseq GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gmapR hwriter IRanges Rsamtools rtracklayer S4Vectors ShortRead SummarizedExperiment VariantAnnotation VariantTools]; };
 463   HTqPCR = derive2 { name="HTqPCR"; version="1.50.0"; sha256="0am98rzwpi3kybq1l27c5qn3n1pg5aqwmh6jq9q0lzbjjin3haqc"; depends=[affy Biobase gplots limma RColorBrewer]; };
 464   Harman = derive2 { name="Harman"; version="1.24.0"; sha256="1rcn9i6mav40c1awxpnrn7lqxqmxhsm1mdgawcvx10xflyy7gqik"; depends=[Ckmeans_1d_dp matrixStats Rcpp]; };
 465   Harshlight = derive2 { name="Harshlight"; version="1.68.0"; sha256="152gxcngniw14kmminf9fcc0jkvi4dab1j88mp13nv05nmkd7c7l"; depends=[affy altcdfenvs Biobase]; };
 466   Heatplus = derive2 { name="Heatplus"; version="3.4.0"; sha256="0b1mzxysmrqinp93p587apna8p0llmawblwj93icydqxxm2jkhb1"; depends=[RColorBrewer]; };
 467   HelloRanges = derive2 { name="HelloRanges"; version="1.22.0"; sha256="1mmp19gpmpgn3kw9wjgsdc25hf4jfgg9bkjplg2qaf8rvm0mj8ih"; depends=[BiocGenerics BiocIO Biostrings BSgenome docopt GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; };
 468   HiCBricks = derive2 { name="HiCBricks"; version="1.14.0"; sha256="0zf4mpq1bv7hhylrwnz3ia26mxwjyfx6rr9l9hxcjvm6zxh856dc"; depends=[BiocParallel curl data_table digest GenomeInfoDb GenomicRanges ggplot2 IRanges jsonlite R_utils R6 RColorBrewer readr reshape2 rhdf5 S4Vectors scales stringr tibble viridis]; };
 469   HiCDCPlus = derive2 { name="HiCDCPlus"; version="1.4.2"; sha256="0psww4sl4m5ynkv53xzyrigxzbypjdhqivg4r64993dlgcdsyi48"; depends=[bbmle Biostrings BSgenome data_table dplyr GenomeInfoDb GenomicInteractions GenomicRanges InteractionSet IRanges MASS pscl R_utils Rcpp rlang rtracklayer S4Vectors tibble tidyr]; };
 470   HiCcompare = derive2 { name="HiCcompare"; version="1.18.0"; sha256="0bgfa085x3w8g005iwnydv1c5i2sz12h5pksmki3427im6khycmr"; depends=[BiocParallel data_table dplyr GenomicRanges ggplot2 gridExtra gtools InteractionSet IRanges KernSmooth mgcv pheatmap QDNAseq rhdf5 S4Vectors]; };
 471   HiLDA = derive2 { name="HiLDA"; version="1.10.0"; sha256="0rf96isx2qwy7fs8y43bamfcdypiwbh5gggxqmdwdgkk0zhcpnls"; depends=[abind BiocGenerics Biostrings BSgenome_Hsapiens_UCSC_hg19 cowplot forcats GenomicFeatures GenomicRanges ggplot2 R2jags Rcpp S4Vectors stringr tidyr TxDb_Hsapiens_UCSC_hg19_knownGene XVector]; };
 472   HiTC = derive2 { name="HiTC"; version="1.40.0"; sha256="1pkshlrra26cad0hf8a54brlkazni6rsvrplh36azxapx5rpps4s"; depends=[Biostrings GenomeInfoDb GenomicRanges IRanges Matrix RColorBrewer rtracklayer]; };
 473   HilbertCurve = derive2 { name="HilbertCurve"; version="1.26.0"; sha256="0ay05dh8n98v1fasj9dw195vi24wry40xnzzcf57wfvxrn18ps34"; depends=[circlize GenomicRanges HilbertVis IRanges png polylabelr]; };
 474   HilbertVis = derive2 { name="HilbertVis"; version="1.54.0"; sha256="0vci86nzwynzv95v90c48nkrwnf55z3a8ah2k6q5d17v8jd9p9b5"; depends=[lattice]; };
 475   HilbertVisGUI = derive2 { name="HilbertVisGUI"; version="1.54.0"; sha256="19x99ah99a7fh1h7lhpxjs0ibnh7bcy6ri250clvv54pv2znindi"; depends=[HilbertVis]; };
 476   HubPub = derive2 { name="HubPub"; version="1.4.0"; sha256="1xixk2vm9ipm9rpdhcvs66gar2f7wlnx72pwfmlr0s75v6d5y0a5"; depends=[available aws_s3 BiocManager biocthis dplyr fs usethis]; };
 477   HumanTranscriptomeCompendium = derive2 { name="HumanTranscriptomeCompendium"; version="1.12.0"; sha256="0b76awzcz8nf6hpipfiylz2rn40zi443wld4v087baljb7y41wyr"; depends=[S4Vectors shiny ssrch SummarizedExperiment]; };
 478   HybridMTest = derive2 { name="HybridMTest"; version="1.40.0"; sha256="0wf002nrfr5ndkr2am555ifnx39iwygd5i2294z84vbfpxdi39rs"; depends=[Biobase fdrtool MASS survival]; };
 479   IHW = derive2 { name="IHW"; version="1.24.0"; sha256="1gsfy75dz7xh16z844llcmjnp0a0ridszmrbbv2bdaa43na5msmf"; depends=[BiocGenerics fdrtool lpsymphony slam]; };
 480   ILoReg = derive2 { name="ILoReg"; version="1.6.0"; sha256="091z51j8whfg02g2lbfrjm53vcyncrc8v6g2agkr7p8ji2ms09la"; depends=[aricode cluster cowplot dendextend DescTools doRNG doSNOW dplyr fastcluster foreach ggplot2 LiblineaR Matrix parallelDist pheatmap plyr reshape2 RSpectra Rtsne S4Vectors scales SingleCellExperiment SparseM SummarizedExperiment umap]; };
 481   IMAS = derive2 { name="IMAS"; version="1.20.0"; sha256="07gb5k0xjwpq74ziknl3y9448591z6cxc7yza16x3vaz3927y7nz"; depends=[AnnotationDbi BiocGenerics BiocParallel doParallel foreach GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggfortify ggplot2 gridExtra IRanges IVAS lattice lme4 Matrix Rsamtools S4Vectors survival]; };
 482   IMMAN = derive2 { name="IMMAN"; version="1.16.0"; sha256="1fg0vcckibrn59lcjvp3bjx1bzzvgl8wvbwj65zs22bkaw0g14h5"; depends=[Biostrings igraph seqinr STRINGdb]; };
 483   IMPCdata = derive2 { name="IMPCdata"; version="1.32.0"; sha256="09x3bnwdjrs3p3mkafln4fxxf1v4yglffwsj7bypfl04d4nqvsn6"; depends=[rjson]; };
 484   INDEED = derive2 { name="INDEED"; version="2.10.0"; sha256="09d694i2rjgaw4f3jsm41x0b1jhzxizbnvi9vvr8sd535cgzgczz"; depends=[devtools glasso igraph visNetwork]; };
 485   INPower = derive2 { name="INPower"; version="1.32.0"; sha256="0zszizdpb4b3lwp9561a1rq415vxns3w5dky2g1121p7b0pn3wdq"; depends=[mvtnorm]; };
 486   INSPEcT = derive2 { name="INSPEcT"; version="1.26.0"; sha256="0jx887vhxwd8zlqajr9czvn9nx88ryyxlnl58hxrlajjpcjkz9ax"; depends=[Biobase BiocGenerics BiocParallel DESeq2 deSolve gdata GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges KernSmooth plgem pROC rootSolve Rsamtools rtracklayer S4Vectors shiny SummarizedExperiment TxDb_Mmusculus_UCSC_mm9_knownGene]; };
 487   IONiseR = derive2 { name="IONiseR"; version="2.20.0"; sha256="0cgx1dcfh617l9vr4r3ky8w7f0snl0vpavfd9n1h5n68p0p42dwi"; depends=[BiocGenerics BiocParallel Biostrings bit64 dplyr ggplot2 magrittr rhdf5 ShortRead stringr tibble tidyr XVector]; };
 488   IPO = derive2 { name="IPO"; version="1.22.1"; sha256="00wzavqw8qldwqsj46z97wi32yxacwf64xjywr2ck6kjicz4d245"; depends=[BiocParallel CAMERA rsm xcms]; };
 489   IRISFGM = derive2 { name="IRISFGM"; version="1.4.0"; sha256="13c9xk3gmqg0chzhmd6kj9fwmc11mc2j3wqin5202dkkn7x9b170"; depends=[AdaptGauss AnnotationDbi anocva clusterProfiler colorspace DEsingle DrImpute ggplot2 ggpubr ggraph igraph knitr Matrix MCL mixtools org_Hs_eg_db org_Mm_eg_db pheatmap Polychrome RColorBrewer Rcpp scater scran Seurat SingleCellExperiment]; };
 490   IRanges = derive2 { name="IRanges"; version="2.30.1"; sha256="1r01c9lczkchgd9hbxxd6wrd5avhy52mfqjck7l9avjq1jimvzv3"; depends=[BiocGenerics S4Vectors]; };
 491   ISAnalytics = derive2 { name="ISAnalytics"; version="1.6.2"; sha256="10arh47m7pg81rry1hb4pdfd0b5rdcj81lz9i32xlxanh3sp8kjv"; depends=[BiocParallel bslib data_table datamods dplyr forcats fs ggplot2 ggrepel glue lifecycle lubridate magrittr psych purrr Rcapture readr readxl rlang shiny shinyWidgets stringr tibble tidyr]; };
 492   ISoLDE = derive2 { name="ISoLDE"; version="1.24.0"; sha256="13cgy5hr4y6l3fkq2fx43wm4aypn5k3wp159kdqgp00lywd7pzxp"; depends=[]; };
 493   ITALICS = derive2 { name="ITALICS"; version="2.56.0"; sha256="150kfwhf47ipr2aql5cxli2hhs3cmgcya9aag0il41xy0wgc96k5"; depends=[affxparser DBI GLAD ITALICSData oligo oligoClasses pd_mapping50k_xba240]; };
 494   IVAS = derive2 { name="IVAS"; version="2.16.0"; sha256="1flsha57b7p2rnnrg4vs9dpghr9kf6g92r0xng3rrmxzb9i88kzw"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel doParallel foreach GenomeInfoDb GenomicFeatures GenomicRanges ggfortify ggplot2 IRanges lme4 Matrix S4Vectors]; };
 495   IWTomics = derive2 { name="IWTomics"; version="1.20.0"; sha256="0yqgvyybfqpp4s44if323ipvxl8mpnjbsfvibbmhq108radzv488"; depends=[fda GenomicRanges gtable IRanges KernSmooth S4Vectors]; };
 496   Icens = derive2 { name="Icens"; version="1.68.0"; sha256="0jnbfv7js8bw0ginql90krrpk0p54whj9igw0zk3jc45jqvj2vyc"; depends=[survival]; };
 497   IdeoViz = derive2 { name="IdeoViz"; version="1.32.0"; sha256="1wwh3ifdijhpm58lw7cmnx084xwfxnc7i0206w8rhrjnvnq6ljh3"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges RColorBrewer rtracklayer]; };
 498   IgGeneUsage = derive2 { name="IgGeneUsage"; version="1.10.0"; sha256="08rm56fniyg6lp8psmh0z6f2hvngvpy0q8fzcxxsizff87mqf0hq"; depends=[Rcpp reshape2 rstan StanHeaders SummarizedExperiment]; };
 499   ImmuneSpaceR = derive2 { name="ImmuneSpaceR"; version="1.24.0"; sha256="12hk0bq0fgna8dbahgc04lm9bgv2jp8lh1qirjs5x45gjz896mbz"; depends=[Biobase curl data_table digest flowCore flowWorkspace ggplot2 gplots heatmaply httr jsonlite pheatmap plotly preprocessCore R6 Rlabkey rmarkdown scales]; };
 500   InPAS = derive2 { name="InPAS"; version="2.4.0"; sha256="17ndjhf0kngpp7l48xbzc4p10h8zrmk76kjf05dw6ifpg50plqip"; depends=[AnnotationDbi batchtools Biobase Biostrings BSgenome cleanUpdTSeq depmixS4 dplyr flock future future_apply GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges limma magrittr parallelly plyranges preprocessCore readr reshape2 RSQLite S4Vectors]; };
 501   InTAD = derive2 { name="InTAD"; version="1.16.0"; sha256="1xjzml66a1sfqi0lai2jflfxwfc4k6n4cbram50sn21h7lkq330k"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 ggpubr IRanges mclust MultiAssayExperiment qvalue rtracklayer S4Vectors SummarizedExperiment]; };
 502   Informeasure = derive2 { name="Informeasure"; version="1.6.0"; sha256="0rna7pgsgq4amjmq91y40gxrqv0rw3vc1rfk5g5bq2ki3lqqvi0s"; depends=[entropy]; };
 503   IntEREst = derive2 { name="IntEREst"; version="1.20.0"; sha256="10rnm2va657zqcmbrd2f19ypmm0s8kyljy0b22kx8qn0zr7zcis3"; depends=[BiocGenerics BiocParallel Biostrings DBI DESeq2 DEXSeq edgeR GenomicAlignments GenomicFeatures GenomicRanges IRanges RMySQL Rsamtools S4Vectors seqinr seqLogo SummarizedExperiment]; };
 504   InterCellar = derive2 { name="InterCellar"; version="2.2.0"; sha256="136hcjhn1mgvmvxqfmmwrclqm4qrfkhwfkkcn008ga9i01s94yvp"; depends=[biomaRt circlize colorspace colourpicker ComplexHeatmap config data_table dendextend dplyr DT factoextra fmsb fs ggplot2 golem htmltools htmlwidgets igraph plotly plyr readxl rlang scales shiny shinyalert shinycssloaders shinydashboard shinyFeedback shinyFiles signal tibble tidyr umap visNetwork wordcloud2]; };
 505   InterMineR = derive2 { name="InterMineR"; version="1.18.0"; sha256="09qsh1ha2f5lipm3hnjpq7ra5xx2fqll9jkkq20w9xqn2b8a59mr"; depends=[Biostrings GenomicRanges httr igraph IRanges RCurl RJSONIO S4Vectors sqldf SummarizedExperiment XML xml2]; };
 506   InteractionSet = derive2 { name="InteractionSet"; version="1.24.0"; sha256="0qjimx25jvm8siq8hmlbf2z6mknzpbq945p06fsj826k57bpcsm5"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges Matrix Rcpp S4Vectors SummarizedExperiment]; };
 507   InteractiveComplexHeatmap = derive2 { name="InteractiveComplexHeatmap"; version="1.4.0"; sha256="13pij41vhafipf96069hv6qkja75vkdxj5iicpbq409d8sdghbj2"; depends=[clisymbols ComplexHeatmap digest fontawesome GetoptLong htmltools IRanges jsonlite kableExtra RColorBrewer S4Vectors shiny svglite]; };
 508   IntramiRExploreR = derive2 { name="IntramiRExploreR"; version="1.18.0"; sha256="0w8zvlx4il5fh9fczfabac9mvzvxbrskn7pf0cc49s5ja8267vpq"; depends=[FGNet igraph knitr]; };
 509   IsoCorrectoR = derive2 { name="IsoCorrectoR"; version="1.14.0"; sha256="1g4xv5x9g5ijjq80k8jswil7crhmwqv2j29rialx9z980nvkphyr"; depends=[dplyr magrittr pracma quadprog readr readxl stringr tibble WriteXLS]; };
 510   IsoCorrectoRGUI = derive2 { name="IsoCorrectoRGUI"; version="1.12.0"; sha256="10ysfzhycawlhm6zxxk1flwgz9si09vxv4hjygmjp2nn23py4ivm"; depends=[IsoCorrectoR readxl tcltk2]; };
 511   IsoGeneGUI = derive2 { name="IsoGeneGUI"; version="2.31.0"; sha256="1w7zxsvmcrz8cj8g8xa1vqbzfycdhgsclhcjmkqjw1hwz6fp3xgn"; depends=[Biobase ff geneplotter goric Iso IsoGene jpeg multtest ORCME ORIClust RColorBrewer Rcpp relimp tkrplot xlsx]; };
 512   IsoformSwitchAnalyzeR = derive2 { name="IsoformSwitchAnalyzeR"; version="1.18.0"; sha256="0n1gb9azxa1mxpsqvw3i3kf72f45nyjj1kgwwrzhd88n3g63lvkd"; depends=[Biobase BiocGenerics Biostrings BSgenome DBI DEXSeq dplyr DRIMSeq edgeR futile_logger GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges limma magrittr plyr RColorBrewer RCurl readr reshape2 rtracklayer stringr tibble tximeta tximport VennDiagram XVector]; };
 513   KBoost = derive2 { name="KBoost"; version="1.4.0"; sha256="03rlkz6sblc6x2g1qy2n3di4gpribhxyivm2ddqsxzlm74f24mc1"; depends=[]; };
 514   KCsmart = derive2 { name="KCsmart"; version="2.54.0"; sha256="1qw4ag113rkg6lv556m0wv5c89r86f9sw1jzdg6mx4vrprnl64lv"; depends=[BiocGenerics KernSmooth multtest siggenes]; };
 515   KEGGREST = derive2 { name="KEGGREST"; version="1.36.3"; sha256="0lzb3z6pzm323q70931b7220ygml7jb4g81dybwa79wqiqz15pni"; depends=[Biostrings httr png]; };
 516   KEGGgraph = derive2 { name="KEGGgraph"; version="1.56.0"; sha256="15pq040pcg8hr18xixmjp59xb7mgvygjv6kisqk8yv99l1611ndx"; depends=[graph RCurl Rgraphviz XML]; };
 517   KEGGlincs = derive2 { name="KEGGlincs"; version="1.22.0"; sha256="1lrs6nqsfsafnvkyj46851r7m6b10dq8f6jfikqyhbv4cisw4kln"; depends=[AnnotationDbi gtools hgu133a_db httr igraph KEGGgraph KEGGREST KOdata org_Hs_eg_db plyr RJSONIO XML]; };
 518   KinSwingR = derive2 { name="KinSwingR"; version="1.14.0"; sha256="1703kfmgp52v6yd5pjj8d7s8j725xq4xgrzsi015jgrka76q1860"; depends=[BiocParallel data_table sqldf]; };
 519   KnowSeq = derive2 { name="KnowSeq"; version="1.10.2"; sha256="0lvxkn2jcyyfwiz9l670dpb6fiyffp0dgsyy9dl5ja7vwrphkv45"; depends=[caret cqn e1071 edgeR ggplot2 gridExtra Hmisc httr jsonlite kernlab limma praznik R_utils randomForest reshape2 rlist rmarkdown stringr sva XML]; };
 520   LACE = derive2 { name="LACE"; version="2.0.0"; sha256="0msm6hw4jkhgi4idz8xd8xjnywhz9sp5bh9xkwamc7854nfq5bqw"; depends=[biomaRt bsplus callr configr curl data_table data_tree doParallel dplyr DT foreach fs htmltools htmlwidgets igraph jsonlite Matrix purrr RColorBrewer readr Rfast shiny shinyBS shinydashboard shinyFiles shinyjs shinythemes sortable stringi stringr SummarizedExperiment tidyr]; };
 521   LBE = derive2 { name="LBE"; version="1.64.0"; sha256="1zlz3z9pin4aikdqwzs8p1y4mmkmjaj28hghv55lp2ygfy3z63y5"; depends=[]; };
 522   LEA = derive2 { name="LEA"; version="3.8.0"; sha256="0x5pwlk24f3mksd1wzgb09majsln4v10j54np1jlvydgcrd5pzf0"; depends=[]; };
 523   LOBSTAHS = derive2 { name="LOBSTAHS"; version="1.22.0"; sha256="0scjl3g6bw3mh3ba7p4wa88vpa91msb6sridx0dn7v1vyi4c46q9"; depends=[CAMERA xcms]; };
 524   LOLA = derive2 { name="LOLA"; version="1.26.0"; sha256="142xwvx7bz5c8qg2kyi336bhrvvvmz8p5jjccciay59ywrwj6glq"; depends=[BiocGenerics data_table GenomicRanges IRanges reshape2 S4Vectors]; };
 525   LPE = derive2 { name="LPE"; version="1.70.0"; sha256="03h2ipcj8zndj5rz1b9cwrdlxkxy0n7jalxmd75bwv3fyw82zdyq"; depends=[]; };
 526   LPEadj = derive2 { name="LPEadj"; version="1.56.0"; sha256="0w33bk7f0cbs8s7ay0q5h7khkxrg3i3h6cbpdz80r7p175rzn430"; depends=[LPE]; };
 527   LRBaseDbi = derive2 { name="LRBaseDbi"; version="2.6.0"; sha256="03h7dp2s2salrydvdwf323bhipfalhz8y59da44cjqbccmvq6l7r"; depends=[AnnotationDbi Biobase DBI RSQLite]; };
 528   LRcell = derive2 { name="LRcell"; version="1.4.0"; sha256="0yl32x1rx195csgv2sr3skw1089l5sb1k2da4x4shjjyljcvbj3y"; depends=[AnnotationHub BiocParallel dplyr ExperimentHub ggplot2 ggrepel magrittr]; };
 529   LedPred = derive2 { name="LedPred"; version="1.30.0"; sha256="17yqi84qmcwyg01swqzilinrjnlk8fq5x673nvz0l9cjbkq8nya3"; depends=[akima e1071 ggplot2 irr jsonlite plot3D plyr RCurl ROCR testthat]; };
 530   LinTInd = derive2 { name="LinTInd"; version="1.0.0"; sha256="1bj2j8hgs8rdk304i1i16xf6qwglyhxpcbw63zsmhqp4d1yw490g"; depends=[ape BiocGenerics Biostrings cowplot data_tree dplyr ggnewscale ggplot2 ggtree IRanges networkD3 pheatmap purrr reshape2 rlist S4Vectors stringdist stringr]; };
 531   LineagePulse = derive2 { name="LineagePulse"; version="1.16.0"; sha256="0h5s52iyfqnv6wrwb13qzv18dr2nrvxp359vxs8yrvynwl2ffhz5"; depends=[BiocParallel circlize ComplexHeatmap ggplot2 gplots knitr Matrix RColorBrewer SingleCellExperiment SummarizedExperiment]; };
 532   LinkHD = derive2 { name="LinkHD"; version="1.10.0"; sha256="0f2qqvas1nvj5j22ihclxiv4sb0k7jyyygcn4bfrxv3pd29nhq47"; depends=[cluster data_table emmeans ggplot2 ggpubr gridExtra MultiAssayExperiment reshape2 rio scales vegan]; };
 533   Linnorm = derive2 { name="Linnorm"; version="2.20.0"; sha256="1002lllgns5klv3q2wsikkbypa2bafpka7a8mri0y5bfxncfr2zb"; depends=[amap apcluster ellipse fastcluster fpc ggdendro ggplot2 gmodels igraph limma MASS mclust Rcpp RcppArmadillo Rtsne statmod vegan zoo]; };
 534   LiquidAssociation = derive2 { name="LiquidAssociation"; version="1.50.0"; sha256="123qlv58y4vhsjnqgxs0w8zylnvib0hjb3jlg5cl74xzdb2gfl0f"; depends=[Biobase geepack org_Sc_sgd_db yeastCC]; };
 535   LoomExperiment = derive2 { name="LoomExperiment"; version="1.14.0"; sha256="1rnnvnbpxlvy85fdyz9zxsn4r6j4x8fydblz00jjl3mk9943538j"; depends=[BiocIO DelayedArray GenomicRanges HDF5Array Matrix rhdf5 S4Vectors SingleCellExperiment stringr SummarizedExperiment]; };
 536   LowMACA = derive2 { name="LowMACA"; version="1.26.2"; sha256="0inx7lgywi6687i5kdifmfx8b4q3gbbiz9vn0mlfp8kwhjirb551"; depends=[BiocParallel Biostrings cBioPortalData data_table gridBase httr LowMACAAnnotation motifStack plyr RColorBrewer reshape2 stringr]; };
 537   LymphoSeq = derive2 { name="LymphoSeq"; version="1.24.0"; sha256="12habp9qw5pi6ylfwraqayxfhmrxx2334gcj0k3c8awgxnb20hc1"; depends=[Biostrings circlize data_table dplyr ggplot2 ggtree ineq LymphoSeqDB msa phangorn plyr RColorBrewer reshape stringdist UpSetR VennDiagram]; };
 538   M3C = derive2 { name="M3C"; version="1.18.0"; sha256="120gd7gkgc98d1l6hl2ij799b3jksdnga5iyb44ps9mbc79hl012"; depends=[cluster corpcor doParallel doSNOW foreach ggplot2 Matrix matrixcalc Rtsne umap]; };
 539   M3Drop = derive2 { name="M3Drop"; version="1.22.0"; sha256="0h8qj7hwkm007717yv2j6bx5ri0zi71yd2bdl45rh68j30qv62ab"; depends=[bbmle gplots Hmisc irlba Matrix matrixStats numDeriv RColorBrewer reldist statmod]; };
 540   MACPET = derive2 { name="MACPET"; version="1.15.1"; sha256="0742i3fxg2793lhgpxb4whh6mwvzd4bn86ykd0rv8sgilxyq5zsl"; depends=[BH bigmemory BiocParallel Biostrings futile_logger GenomeInfoDb GenomicAlignments GenomicRanges GEOquery gtools InteractionSet intervals IRanges knitr plyr Rbowtie Rcpp Rsamtools rtracklayer S4Vectors ShortRead]; };
 541   MACSQuantifyR = derive2 { name="MACSQuantifyR"; version="1.10.0"; sha256="060ja4q3nh8vl2gmdhdi028kqbk108mgmzmlvi68v3ndlhn535fq"; depends=[ggplot2 ggrepel gridExtra lattice latticeExtra png prettydoc readxl rmarkdown rvest xml2]; };
 542   MACSr = derive2 { name="MACSr"; version="1.4.0"; sha256="1m35zsd20cfj715hxdn0sglr3k6yc18danhi422wx9mqnrig9grh"; depends=[AnnotationHub basilisk ExperimentHub reticulate S4Vectors]; };
 543   MADSEQ = derive2 { name="MADSEQ"; version="1.22.0"; sha256="0wv6c1hmpsmzlxbx4vxvb7259ywy15knwkw3k6cdn15sxfkyviaf"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 coda GenomeInfoDb GenomicAlignments GenomicRanges IRanges preprocessCore rjags Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation vcfR VGAM zlibbioc]; };
 544   MAGAR = derive2 { name="MAGAR"; version="1.4.0"; sha256="1kgbs5ym43sdgqg1424s7pgz0jchqn19i73srsrl4icbizdig9c7"; depends=[argparse bigstatsr crlmm data_table doParallel ff HDF5Array igraph impute jsonlite plyr reshape2 rjson RnBeads RnBeads_hg19 snpStats UpSetR]; };
 545   MAGeCKFlute = derive2 { name="MAGeCKFlute"; version="2.0.0"; sha256="0vcf7p585mw6avvs7rh2ffdhw2j5v9fcppdcp3a8lc99gxz2302m"; depends=[Biobase clusterProfiler depmap DOSE enrichplot ggplot2 ggrepel gridExtra msigdbr pathview reshape2]; };
 546   MAI = derive2 { name="MAI"; version="1.2.0"; sha256="1p2rimkrpg3r0pdd37wcr21lsbysmpvs318r477s0amvnbcqi9ni"; depends=[caret doParallel e1071 foreach future future_apply missForest pcaMethods S4Vectors SummarizedExperiment tidyverse]; };
 547   MAIT = derive2 { name="MAIT"; version="1.30.0"; sha256="0bhvhnxkhwjs0ilfa4y9a4wpiqg77hfpydfdx7v95fhgnwwcayii"; depends=[agricolae CAMERA caret class e1071 gplots MASS pls plsgenomics Rcpp xcms]; };
 548   MANOR = derive2 { name="MANOR"; version="1.68.0"; sha256="1z0222fb2xkyi0wylcvlpzz8gdlh1174jxyv5ihz0wxxa2w07kdf"; depends=[GLAD]; };
 549   MAST = derive2 { name="MAST"; version="1.22.0"; sha256="1kmrqxcfzzcs8l33n9qn0vahc6wxq6ks3cjx95vg96maf2qzhzzi"; depends=[abind Biobase BiocGenerics data_table ggplot2 plyr progress reshape2 S4Vectors SingleCellExperiment stringr SummarizedExperiment]; };
 550   MBASED = derive2 { name="MBASED"; version="1.30.0"; sha256="1hg8jg898zr0ighg64jzkb513vbjr1a76mc203pgh6h3gmdn56px"; depends=[BiocGenerics BiocParallel GenomicRanges RUnit SummarizedExperiment]; };
 551   MBAmethyl = derive2 { name="MBAmethyl"; version="1.30.0"; sha256="0kz8brk08d32b1iqp6lrwksfpwwiqbmdgni54pwy36n0n7biir9k"; depends=[]; };
 552   MBCB = derive2 { name="MBCB"; version="1.50.0"; sha256="1qslgqivsg8hjvyyw59d192jramla88lnx22zixm8jnjs7r4w4fi"; depends=[preprocessCore tcltk2]; };
 553   MBECS = derive2 { name="MBECS"; version="1.0.0"; sha256="0z9mhqg6f6gylw5q6hi0ll4nv0b5crzwp217i1n05psg8dg7wzi3"; depends=[cluster dplyr ggplot2 gridExtra limma lme4 lmerTest magrittr Matrix pheatmap phyloseq rmarkdown ruv sva tibble tidyr vegan]; };
 554   MBQN = derive2 { name="MBQN"; version="2.8.0"; sha256="0dml5ysapdmcf6qlv33v69007zj9bgz0gqdj4ywfwcsmjyvscdp6"; depends=[BiocFileCache ggplot2 limma PairedData preprocessCore rappdirs RCurl rmarkdown SummarizedExperiment xml2]; };
 555   MBttest = derive2 { name="MBttest"; version="1.24.0"; sha256="0ydlbn2rh7b83l6fg2qrcr6a2vx2h29mv2ifi59dnybczwx8krx1"; depends=[gplots gtools]; };
 556   MCbiclust = derive2 { name="MCbiclust"; version="1.20.0"; sha256="12j1ghn3gccm6nsjp1faki2ncbxhpirp8bchm42mmqava5j7rgym"; depends=[AnnotationDbi BiocParallel cluster GGally ggplot2 GO_db org_Hs_eg_db scales WGCNA]; };
 557   MDTS = derive2 { name="MDTS"; version="1.16.0"; sha256="0hsbw98i88pls8744nj6z6lar4m649jdjgqrh6k692zmh5d8n52a"; depends=[Biostrings DNAcopy GenomicAlignments GenomicRanges IRanges Rsamtools stringr]; };
 558   MEAL = derive2 { name="MEAL"; version="1.26.0"; sha256="1d1daf2xj3bwvcgwd2dbf27vmw6n5rk1kk4crc61v0dra8j9dsqf"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 Gviz IRanges isva limma matrixStats minfi missMethyl MultiDataSet permute S4Vectors SmartSVA SummarizedExperiment vegan]; };
 559   MEAT = derive2 { name="MEAT"; version="1.8.0"; sha256="0s0mbfl1p6w3xpv27wjy6i8gddkr8prc6fhglfmklci791gxmjja"; depends=[dplyr dynamicTreeCut glmnet impute minfi RPMM stringr SummarizedExperiment tibble wateRmelon]; };
 560   MEB = derive2 { name="MEB"; version="1.10.0"; sha256="02zp4zk2986xajp91rak4pg8vwxp1f78wv3qwjmc8pig5m65a22j"; depends=[e1071 SummarizedExperiment]; };
 561   MEDIPS = derive2 { name="MEDIPS"; version="1.48.0"; sha256="1qxg2a7jqhnbn7zvlvn4i4kjg010ab34afds2sgcsvl4qpqcj9d0"; depends=[biomaRt Biostrings BSgenome DNAcopy edgeR GenomicRanges gtools IRanges preprocessCore Rsamtools rtracklayer]; };
 562   MEDME = derive2 { name="MEDME"; version="1.56.0"; sha256="0jfqr2bc8v45j38nmk9k03p02imvmrhfbd7b2gj9zcnbj4j3z6rz"; depends=[Biostrings drc MASS]; };
 563   MEIGOR = derive2 { name="MEIGOR"; version="1.30.0"; sha256="1qfb969jjm6xyrnq1l108mhjrgzm886aiakiacagsbivjcq7ianf"; depends=[CNORode deSolve Rsolnp snowfall]; };
 564   MGFM = derive2 { name="MGFM"; version="1.30.0"; sha256="0f0flpv2i6531k4vdkwljpzzljpdsyj32arf56q362vq0zpaf0k9"; depends=[annotate AnnotationDbi]; };
 565   MGFR = derive2 { name="MGFR"; version="1.22.0"; sha256="1v9aljss454kjqzrwzgfirqfpi59f36l9jgmfd8zwkljwgi8i6fn"; depends=[annotate biomaRt]; };
 566   MIGSA = derive2 { name="MIGSA"; version="1.20.0"; sha256="0ijf33z9xgqb67zhym0zn7jjfyh8kr7bvhm341b517r5igb311fb"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel data_table edgeR futile_logger ggdendro ggplot2 GO_db GOstats graph GSEABase ismev jsonlite limma matrixStats org_Hs_eg_db RBGL reshape2 Rgraphviz vegan]; };
 567   MIMOSA = derive2 { name="MIMOSA"; version="1.34.0"; sha256="0j2bf365ycs5z7vprm247g22cjfsq9g9z7x4h5g90nvkzz7cbx4r"; depends=[Biobase coda data_table dplyr Formula ggplot2 MASS MCMCpack modeest plyr pracma Rcpp RcppArmadillo reshape rlang scales testthat tidyr]; };
 568   MIRA = derive2 { name="MIRA"; version="1.18.0"; sha256="17wxks9hbyy8hxmv0sfnd3wn1zfq33yy1p3lvbzsgzh1r2sgc2x1"; depends=[Biobase BiocGenerics bsseq data_table GenomicRanges ggplot2 IRanges S4Vectors]; };
 569   MLInterfaces = derive2 { name="MLInterfaces"; version="1.76.0"; sha256="179d19kxjipfkc40z15337x1vzqd7vz3gbmr2lw5w7x9l857ngs5"; depends=[annotate Biobase BiocGenerics cluster fpc gbm gdata genefilter ggvis hwriter magrittr MASS mlbench pls RColorBrewer Rcpp rpart sfsmisc shiny threejs]; };
 570   MLP = derive2 { name="MLP"; version="1.44.0"; sha256="169ck10y0md887x0agigbrzsdncd50sxxwrm17iz6qais9adikqa"; depends=[AnnotationDbi gplots]; };
 571   MLSeq = derive2 { name="MLSeq"; version="2.14.0"; sha256="0ajkxa6wm215df6i8y7z9ha68m25p5kg5hzk2ni4v07w6mn3cikj"; depends=[Biobase caret DESeq2 edgeR foreach ggplot2 limma pamr plyr sSeq SummarizedExperiment testthat VennDiagram xtable]; };
 572   MMAPPR2 = derive2 { name="MMAPPR2"; version="1.10.0"; sha256="1w8ajra7ip9yfmzinvdgxcm1n808saj0shfx0irflmz54a829kfr"; depends=[Biobase BiocGenerics BiocParallel data_table dplyr ensemblVEP GenomeInfoDb GenomicRanges gmapR IRanges magrittr Rsamtools S4Vectors stringr tidyr VariantAnnotation VariantTools]; };
 573   MMDiff2 = derive2 { name="MMDiff2"; version="1.24.0"; sha256="031d3j2d6rqj5adaflbhq1q40h1573mg44vxk07hg3ky6w55mv82"; depends=[Biobase Biostrings BSgenome GenomicRanges ggplot2 locfit RColorBrewer Rsamtools S4Vectors shiny]; };
 574   MMUPHin = derive2 { name="MMUPHin"; version="1.10.3"; sha256="0kg4zwwwbxzzl4cddbcn2ww93z5z17n6d2imw2gfr8jcpzxysd3n"; depends=[cowplot dplyr fpc ggplot2 igraph Maaslin2 metafor stringr tidyr]; };
 575   MODA = derive2 { name="MODA"; version="1.22.0"; sha256="1aa5g2zy251q3rpy83c4siyvdnrzw5cb3a136qrxd69z6pfpnkx3"; depends=[AMOUNTAIN cluster dynamicTreeCut igraph RColorBrewer WGCNA]; };
 576   MOFA2 = derive2 { name="MOFA2"; version="1.6.0"; sha256="1cdx2zgmicn5qa59x794mjcnz9csgmsscl21qd9yhwc5n9fj0zqw"; depends=[basilisk corrplot cowplot DelayedArray dplyr forcats ggplot2 ggrepel HDF5Array magrittr pheatmap RColorBrewer reshape2 reticulate rhdf5 Rtsne stringi tidyr uwot]; };
 577   MOGAMUN = derive2 { name="MOGAMUN"; version="1.6.0"; sha256="1wgpr6ci1hmzl1racszxfvgk95q5x4ca21rxhimimgag1gkk472b"; depends=[BiocParallel igraph RCy3 RUnit stringr]; };
 578   MOMA = derive2 { name="MOMA"; version="1.8.0"; sha256="1fkmjaja97lnicxd6inwas5hfvpl0nz3my1cryidkc2ycsmslk8s"; depends=[circlize cluster ComplexHeatmap dplyr ggplot2 magrittr MKmisc MultiAssayExperiment qvalue RColorBrewer readr reshape2 rlang stringr tibble tidyr]; };
 579   MOSim = derive2 { name="MOSim"; version="1.10.0"; sha256="0vvigfn830z4cqgywglk6fd8vxakf68l9k076l5a7c52zq5l2vsl"; depends=[Biobase dplyr ggplot2 HiddenMarkov IRanges lazyeval matrixStats purrr rlang S4Vectors scales stringi stringr tibble tidyr zoo]; };
 580   MPFE = derive2 { name="MPFE"; version="1.32.0"; sha256="10s0lyga44c1xnpv269sifhir1r208gf5p5ww41y6wp42rnr9shl"; depends=[]; };
 581   MPRAnalyze = derive2 { name="MPRAnalyze"; version="1.14.0"; sha256="0pxp5k38fqxx8ncr8v1qv4mnckjyypq8s49h2vb64x7hrdiygvbx"; depends=[BiocParallel progress SummarizedExperiment]; };
 582   MQmetrics = derive2 { name="MQmetrics"; version="1.4.0"; sha256="0fyh9pqrfjav3ygvjvg90jv3vw81ngsxpgmkdwvdwpzrmqn2ngp9"; depends=[cowplot dplyr ggforce gghalves ggplot2 ggpubr ggrepel gridExtra gtable knitr magrittr plyr purrr RColorBrewer readr reshape2 rlang rmarkdown scales stringr tidyr]; };
 583   MSA2dist = derive2 { name="MSA2dist"; version="1.0.0"; sha256="075zq2rdxdjs7a777nxwqm0jm7g6qfvnijfrdrk3pckqg34z83bn"; depends=[ape Biostrings doParallel dplyr foreach GenomicRanges IRanges Rcpp RcppThread rlang seqinr stringi stringr tibble tidyr]; };
 584   MSPrep = derive2 { name="MSPrep"; version="1.6.0"; sha256="1g0kd405iypvl0vkc190a1mm4gf17pdvk32ij3m23d03pz6qsdpg"; depends=[crmn dplyr magrittr missForest pcaMethods preprocessCore rlang S4Vectors stringr SummarizedExperiment sva tibble tidyr VIM]; };
 585   MSnID = derive2 { name="MSnID"; version="1.30.0"; sha256="1yiw95p40nz0pvq7s4i0xg02r9yqmnknak00z4lkw8jij3w3rkkq"; depends=[AnnotationDbi AnnotationHub Biobase BiocGenerics BiocStyle Biostrings data_table doParallel dplyr foreach ggplot2 iterators msmsTests MSnbase mzID mzR ProtGenerics purrr R_cache Rcpp reshape2 rlang RUnit stringr tibble xtable]; };
 586   MSnbase = derive2 { name="MSnbase"; version="2.22.0"; sha256="1xzn0k3c2wn6c6gv90hddy3c201sg927342zrw9ig2xap0r053x3"; depends=[affy Biobase BiocGenerics BiocParallel digest ggplot2 impute IRanges lattice MALDIquant MASS MsCoreUtils mzID mzR pcaMethods plyr ProtGenerics Rcpp S4Vectors scales vsn XML]; };
 587   MSstats = derive2 { name="MSstats"; version="4.4.1"; sha256="0n03spd9a57wqsl3hmz5flsh8ijzgykg2iv7f05n0a7iwrq75ms4"; depends=[checkmate data_table ggplot2 ggrepel gplots limma lme4 marray MASS MSstatsConvert preprocessCore Rcpp RcppArmadillo survival]; };
 588   MSstatsConvert = derive2 { name="MSstatsConvert"; version="1.6.0"; sha256="01rh07a5ibk3fn7dvmmj4665xki03jvlybv40sa0fzf25z07nsfg"; depends=[checkmate data_table log4r stringi]; };
 589   MSstatsLOBD = derive2 { name="MSstatsLOBD"; version="1.4.0"; sha256="177fz522fx2bph66gm945jrg5wvr7cz98n0wbn7ndym85v6dql32"; depends=[ggplot2 minpack_lm Rcpp]; };
 590   MSstatsLiP = derive2 { name="MSstatsLiP"; version="1.2.1"; sha256="1yx686wk5ykl31qq3fxcsvh8bw5hrv3yiqrkc1jngxjph1xzx2bg"; depends=[Biostrings checkmate data_table dplyr factoextra ggplot2 ggpubr gridExtra MSstats MSstatsConvert MSstatsPTM purrr Rcpp scales stringr tibble tidyr tidyverse]; };
 591   MSstatsPTM = derive2 { name="MSstatsPTM"; version="1.6.0"; sha256="1zpgisvnnqnp9x1ylzfkhdw2z3d9vfgig560xjl5vwmj3vhix7i3"; depends=[Biostrings checkmate data_table dplyr ggplot2 ggrepel gridExtra MSstats MSstatsConvert MSstatsTMT Rcpp stringr]; };
 592   MSstatsQC = derive2 { name="MSstatsQC"; version="2.14.0"; sha256="0bgkwgcghdmccza7f4fkza3drjarl3b3prbzq7kf88k7k7zvknzr"; depends=[dplyr ggExtra ggplot2 MSnbase plotly qcmetrics]; };
 593   MSstatsQCgui = derive2 { name="MSstatsQCgui"; version="1.16.0"; sha256="0nrhqznkg61vmv9g3zly0p26dvkbcf4lqx48yj9k8rbrfkg06bdk"; depends=[dplyr ggExtra gridExtra MSstatsQC plotly shiny]; };
 594   MSstatsSampleSize = derive2 { name="MSstatsSampleSize"; version="1.10.0"; sha256="09cclwrf2s0ld3cvvs0drkfk8xgq6la9cc9mqn4kjw355zqwb7lp"; depends=[BiocParallel caret ggplot2 gridExtra MSstats reshape2]; };
 595   MSstatsTMT = derive2 { name="MSstatsTMT"; version="2.4.1"; sha256="1g3vljkfddq95m31r53vcjnk785ikw8ml1clmfii10s66y852c4j"; depends=[checkmate data_table ggplot2 limma lme4 lmerTest MSstats MSstatsConvert]; };
 596   MVCClass = derive2 { name="MVCClass"; version="1.70.0"; sha256="0apcjlq4i2mg8mlfqgvlcsqkiy51whzid3nd0m830jff0ywgh47g"; depends=[]; };
 597   MWASTools = derive2 { name="MWASTools"; version="1.20.0"; sha256="17j82k7nrw8lsvvzlzaq6134gckkrxgff3yi8s4jwlzi1grzgjc7"; depends=[boot car ComplexHeatmap ggplot2 glm2 gridExtra igraph KEGGgraph KEGGREST ppcor qvalue RCurl SummarizedExperiment]; };
 598   Maaslin2 = derive2 { name="Maaslin2"; version="1.10.0"; sha256="1qw2vmxg5z8lirj2pknfsybn9vhrifqh3j7p2xyhnjsbsfw5ix70"; depends=[biglm car chemometrics cplm data_table dplyr edgeR ggplot2 glmmTMB hash lme4 lmerTest logging lpsymphony MASS metagenomeSeq optparse pbapply pcaPP pheatmap pscl robustbase vegan]; };
 599   Macarron = derive2 { name="Macarron"; version="1.0.0"; sha256="03mkvs3wwhs3xbyqm62db6x3r8djw57bkmrv1sxvz437khn12szp"; depends=[BiocParallel data_table DelayedArray dynamicTreeCut ff logging Maaslin2 plyr psych RCurl RJSONIO SummarizedExperiment WGCNA xml2]; };
 600   MantelCorr = derive2 { name="MantelCorr"; version="1.66.0"; sha256="1gkf6i63933ip5w41ba146d9sa3zxrq212cvk5pbma7mcflb4hdc"; depends=[]; };
 601   MassArray = derive2 { name="MassArray"; version="1.48.0"; sha256="1pa4mavjbd015cjmjy5kzzzkv60268a5yifzxhrdskjjigg6jd0k"; depends=[]; };
 602   MassSpecWavelet = derive2 { name="MassSpecWavelet"; version="1.62.0"; sha256="0g9izdy3f7h1zmsfbq45ahdz0ak5013rp3vxc4ijb1mpqx8ldd39"; depends=[]; };
 603   MatrixGenerics = derive2 { name="MatrixGenerics"; version="1.8.1"; sha256="1liblnpziyyjxzrhdd5d89ilvfqqhbl87h3hsmdm0kwnmc73r37f"; depends=[matrixStats]; };
 604   MatrixQCvis = derive2 { name="MatrixQCvis"; version="1.4.0"; sha256="11d8w1w2vy4wwvyd7wxg65j0jlfwk19ys5q1cfwmizlr048mhnv5"; depends=[ComplexHeatmap dplyr ggplot2 Hmisc htmlwidgets impute imputeLCMD limma openxlsx pcaMethods plotly proDA rlang rmarkdown Rtsne S4Vectors shiny shinydashboard shinyhelper shinyjs SummarizedExperiment tibble tidyr umap UpSetR vegan vsn]; };
 605   MatrixRider = derive2 { name="MatrixRider"; version="1.28.0"; sha256="1x35yjmgrnp327na3wnj7m42v71kgjhja3c80535042vgj6rilqp"; depends=[Biostrings IRanges S4Vectors TFBSTools XVector]; };
 606   MeSHDbi = derive2 { name="MeSHDbi"; version="1.32.0"; sha256="07mcs3hj8z8bij09l58805rjff54d5599b12gxli56v2b5lk2ksw"; depends=[AnnotationDbi Biobase RSQLite]; };
 607   MeasurementError_cor = derive2 { name="MeasurementError.cor"; version="1.68.0"; sha256="165chxcqbklamrrx6c2dmvxf4gj0mbmxy4wa3yxkn8kx9rxazn3f"; depends=[]; };
 608   Melissa = derive2 { name="Melissa"; version="1.12.0"; sha256="1acf89vy246gzs3xpnl1khc0jp8i7gh503r6f64a5452jpmwmbbh"; depends=[assertthat BiocStyle BPRMeth cowplot data_table doParallel foreach GenomicRanges ggplot2 magrittr matrixcalc mclust MCMCpack mvtnorm ROCR truncnorm]; };
 609   Mergeomics = derive2 { name="Mergeomics"; version="1.24.0"; sha256="1r2bx5w3xxamdzgnijffqn6rfw69320hk0glrsm9abssnfh1aygc"; depends=[]; };
 610   MesKit = derive2 { name="MesKit"; version="1.6.0"; sha256="1484x2sbbliiyjfmdx0kl11h24rgjd5xyzl34d3d2q56dgpf8plr"; depends=[AnnotationDbi ape Biostrings circlize ComplexHeatmap cowplot data_table dplyr ggplot2 ggrepel ggridges IRanges mclust phangorn pracma RColorBrewer S4Vectors tidyr]; };
 611   MetCirc = derive2 { name="MetCirc"; version="1.26.0"; sha256="09skarxg69c3h0cgabm5rib10w6bkhxb8bjwdr6vsq1snzrw2p0n"; depends=[amap circlize ggplot2 MSnbase S4Vectors scales shiny]; };
 612   MetID = derive2 { name="MetID"; version="1.14.0"; sha256="02i4n39zar5ybzz0l051ik835q4yf4cps7hsv2yyna3misp22gpa"; depends=[ChemmineR devtools igraph Matrix stringr]; };
 613   MetNet = derive2 { name="MetNet"; version="1.14.0"; sha256="01vm4km6xs55nkw7gbvf73c55x0izi4kfc58ppcd5bjgsmwvzw0k"; depends=[BiocParallel bnlearn dplyr GeneNet GENIE3 ggplot2 parmigene psych rlang S4Vectors stabs SummarizedExperiment tibble tidyr]; };
 614   MetaCyto = derive2 { name="MetaCyto"; version="1.18.0"; sha256="0l5q6hiz9hjjpd8y255v34487yv7ianfq8rd7py76686l9l82rya"; depends=[cluster fastcluster flowCore FlowSOM ggplot2 metafor tidyr]; };
 615   MetaNeighbor = derive2 { name="MetaNeighbor"; version="1.16.0"; sha256="1fjggizwmm2db4plqqcfk49rvsm6jy116lb2sbyzvhs3bmp8nrx7"; depends=[beanplot dplyr ggplot2 gplots igraph Matrix matrixStats RColorBrewer SingleCellExperiment SummarizedExperiment tibble tidyr]; };
 616   MetaVolcanoR = derive2 { name="MetaVolcanoR"; version="1.10.0"; sha256="0mdjl3vvf4ymc7rg9r08dgq0n0n7wc4lgz6ayjhp049ar0ry8yhr"; depends=[cowplot data_table dplyr ggplot2 htmlwidgets metafor metap plotly rlang tidyr topconfects]; };
 617   Metab = derive2 { name="Metab"; version="1.30.0"; sha256="1hy9h8q61did3j3md72gdjsnxv6x7vgkqidaffn8c66xcbc98pw5"; depends=[pander svDialogs xcms]; };
 618   MetaboAnnotation = derive2 { name="MetaboAnnotation"; version="1.0.0"; sha256="08xdp7s5c4xb9qhg91mgyb07d21l327bjyqzvrnwbn8ynkqyv3wh"; depends=[BiocGenerics BiocParallel MetaboCoreUtils MsCoreUtils ProtGenerics QFeatures S4Vectors Spectra SummarizedExperiment]; };
 619   MetaboCoreUtils = derive2 { name="MetaboCoreUtils"; version="1.4.0"; sha256="0lvc8hzn0czzrz01hwkkhrsshq5k5nikc5irn6hbi3sv93r2bzka"; depends=[MsCoreUtils]; };
 620   MetaboSignal = derive2 { name="MetaboSignal"; version="1.26.2"; sha256="1cvzm0dgk09angkdmp27f0nfh0glz8zlljz2zg4gs2ng15virp4n"; depends=[AnnotationDbi biomaRt EnsDb_Hsapiens_v75 hpar igraph KEGGgraph KEGGREST MWASTools mygene org_Hs_eg_db RCurl]; };
 621   MethPed = derive2 { name="MethPed"; version="1.24.0"; sha256="145pm17h164qqj4vhdrgrqqj5j1axls0841c6ikz5yp0l13065ij"; depends=[Biobase randomForest]; };
 622   MethReg = derive2 { name="MethReg"; version="1.6.0"; sha256="1133ndj4q6ddmq6rjjljj8f01zrh5rn09pgj6g0yp4yfpymbkj04"; depends=[AnnotationHub DelayedArray dplyr ExperimentHub GenomicRanges ggplot2 ggpubr IRanges MASS Matrix plyr progress pscl readr rlang S4Vectors sesame sesameData sfsmisc stringr SummarizedExperiment tibble tidyr]; };
 623   MethTargetedNGS = derive2 { name="MethTargetedNGS"; version="1.28.0"; sha256="06cvyic6y1g6j397j9xvsqhjhwlarldxqfg28i00ym6l6hzcad4l"; depends=[Biostrings gplots seqinr stringr]; };
 624   MethylAid = derive2 { name="MethylAid"; version="1.30.0"; sha256="02m1f64734akq7fjklxlckxh0jvw6qvkwkcy86fnn4kp06z28vcq"; depends=[Biobase BiocGenerics BiocParallel ggplot2 gridBase hexbin matrixStats minfi RColorBrewer shiny SummarizedExperiment]; };
 625   MethylMix = derive2 { name="MethylMix"; version="2.26.0"; sha256="1fdsia49km7rha9m05zn37arjdxhvji4hb5zf6s1fapfy9nvlfyy"; depends=[data_table digest foreach ggplot2 impute limma R_matlab RColorBrewer RCurl RPMM]; };
 626   MethylSeekR = derive2 { name="MethylSeekR"; version="1.36.0"; sha256="141ms4dy49pvfkvhrkvpffx3wcn68zz2c99cxajhymv7346qi9sz"; depends=[BSgenome geneplotter GenomicRanges IRanges mhsmm rtracklayer]; };
 627   Mfuzz = derive2 { name="Mfuzz"; version="2.56.0"; sha256="0rz5gpw3p2qcghi1gd3sdxcbwm0f2b4hqdr461wlz0r0dbnnwhh4"; depends=[Biobase e1071 tkWidgets]; };
 628   MiChip = derive2 { name="MiChip"; version="1.50.0"; sha256="10z06f0i41yckxvs32hnd6k1q5l4fvdvr27rgjrkk817k14shn59"; depends=[Biobase]; };
 629   MiPP = derive2 { name="MiPP"; version="1.68.0"; sha256="080cc1y32yi046xsj05vppp1l3c2sdyjclw8p439kmakcrf0sigf"; depends=[Biobase e1071 MASS]; };
 630   MiRaGE = derive2 { name="MiRaGE"; version="1.38.0"; sha256="0w4c41izigparfaddj5ffccxw7v33gc11zh0b1cdyz2hacmw03ly"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager S4Vectors]; };
 631   MicrobiomeProfiler = derive2 { name="MicrobiomeProfiler"; version="1.2.0"; sha256="0czli81lqbx1xkhj5yqlixjgszk4whvckhjpw9k70ggcx9svc249"; depends=[clusterProfiler config DT enrichplot ggplot2 golem htmltools magrittr shiny shinycustomloader shinyWidgets]; };
 632   MicrobiotaProcess = derive2 { name="MicrobiotaProcess"; version="1.8.2"; sha256="1v7drwwn1qflrxi25nllk84xr7v24qypdnq7pz7nkxganfdnw7xh"; depends=[ape Biostrings coin dplyr dtplyr foreach ggplot2 ggrepel ggsignif ggstar ggtree ggtreeExtra magrittr MASS patchwork pillar plyr rlang SummarizedExperiment tibble tidyr tidyselect tidytree treeio vegan zoo]; };
 633   MineICA = derive2 { name="MineICA"; version="1.36.1"; sha256="0552rxj4blisxyzrjm59qxmqnrfg9x1kygr6d2knhnzyasprwl5p"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt cluster colorspace fastICA foreach fpc ggplot2 GOstats graph gtools Hmisc igraph JADE lumi lumiHumanAll_db marray mclust plyr RColorBrewer Rgraphviz scales xtable]; };
 634   MinimumDistance = derive2 { name="MinimumDistance"; version="1.40.0"; sha256="0409nqlhjnx0l8zcy71zrawjbml1rmjkgch9a87zcc1j2phnpdch"; depends=[Biobase BiocGenerics data_table DNAcopy ff foreach GenomeInfoDb GenomicRanges IRanges lattice MatrixGenerics matrixStats oligoClasses S4Vectors SummarizedExperiment VanillaICE]; };
 635   MobilityTransformR = derive2 { name="MobilityTransformR"; version="1.0.0"; sha256="0x3xxh54sdlb6dan9rrrg116vfr1q4b0z9fdjaqh52qbwchy1x82"; depends=[MetaboCoreUtils MSnbase Spectra xcms]; };
 636   ModCon = derive2 { name="ModCon"; version="1.4.0"; sha256="1av9ragz32ss6y0hh36hc8zldg5qmgz4kxjkgi649v2l2fb5yn8h"; depends=[data_table]; };
 637   Modstrings = derive2 { name="Modstrings"; version="1.12.1"; sha256="1854yzhr3k4x72d5ix5c14m6b3hhxlg2pvmyifvqx3j65rbinq37"; depends=[BiocGenerics Biostrings crayon GenomicRanges IRanges S4Vectors stringi stringr XVector]; };
 638   MoonlightR = derive2 { name="MoonlightR"; version="1.22.0"; sha256="1yigaiychilz0v847vvqwxdgn5gcfxih1nxf7586g0w9g147srd9"; depends=[Biobase circlize clusterProfiler doParallel DOSE foreach GEOquery gplots HiveR limma parmigene randomForest RColorBrewer RISmed SummarizedExperiment TCGAbiolinks]; };
 639   Motif2Site = derive2 { name="Motif2Site"; version="1.0.0"; sha256="1lrzl082gb2l2y5skmra9kl2rns19xdbxaw5cki3n7831s476kq2"; depends=[BiocGenerics Biostrings BSgenome edgeR GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS mixtools S4Vectors]; };
 640   MotifDb = derive2 { name="MotifDb"; version="1.38.0"; sha256="1cyfz0l0yvdii3idaiq5w39yzxlzfpifa4v5pv7hdjfjj83a8rbi"; depends=[BiocGenerics Biostrings GenomicRanges IRanges rtracklayer S4Vectors splitstackshape]; };
 641   MouseFM = derive2 { name="MouseFM"; version="1.6.0"; sha256="1z5qlkcgjrj2hhjqh5zirp940brsc92c9ss28f4fq35j2x4zhmx5"; depends=[biomaRt curl data_table dplyr GenomeInfoDb GenomicRanges ggplot2 gtools httr IRanges jsonlite reshape2 rlist scales tidyr]; };
 642   MsBackendMassbank = derive2 { name="MsBackendMassbank"; version="1.4.0"; sha256="1jabh2xr27c12628bfsn6jywbygmisaggvkvazaf8qx14xdi5d7c"; depends=[BiocParallel DBI IRanges MsCoreUtils ProtGenerics S4Vectors Spectra]; };
 643   MsBackendMgf = derive2 { name="MsBackendMgf"; version="1.4.0"; sha256="1m06akw50rrpj5h3r78a5c4cbq52j8ni5kkk1fw7221z8j65sy8c"; depends=[BiocParallel IRanges MsCoreUtils S4Vectors Spectra]; };
 644   MsBackendMsp = derive2 { name="MsBackendMsp"; version="1.0.0"; sha256="0p6df64w9d79i7xzwg19pqwn074slfp2izh7hiflncdxffp412i1"; depends=[BiocParallel IRanges MsCoreUtils S4Vectors Spectra]; };
 645   MsBackendRawFileReader = derive2 { name="MsBackendRawFileReader"; version="1.2.0"; sha256="1zlgdj7ycf3is9wv5w0fbrzf4w7fh3k21id1s6gwr5zdws9zbhs6"; depends=[BiocParallel IRanges MsCoreUtils rawrr S4Vectors Spectra]; };
 646   MsCoreUtils = derive2 { name="MsCoreUtils"; version="1.8.0"; sha256="077x1zcy27x8akmagjn75j97082cgnahrbfw0qx08q455m5x3xzh"; depends=[clue MASS Rcpp S4Vectors]; };
 647   MsFeatures = derive2 { name="MsFeatures"; version="1.4.0"; sha256="111iqcq4q315pb4j8z427shin9b00p179m2s9h6dd7imvbd68yq3"; depends=[MsCoreUtils ProtGenerics SummarizedExperiment]; };
 648   MuData = derive2 { name="MuData"; version="1.0.0"; sha256="11plrz8mfaj1nrw6igxxk6hmrhnxyfs7cw3bmj3f1fg6sa9nr76j"; depends=[DelayedArray Matrix MultiAssayExperiment rhdf5 S4Vectors SingleCellExperiment SummarizedExperiment]; };
 649   Mulcom = derive2 { name="Mulcom"; version="1.46.0"; sha256="1fs3wl9x7ww6q15ichi3jxfjvafsa2vdghds948vwwn9jpv79bhc"; depends=[Biobase fields]; };
 650   MultiAssayExperiment = derive2 { name="MultiAssayExperiment"; version="1.22.0"; sha256="1wnp52l9vifxn1wzqgndzp9b6ih0s1cflxx1fhw32k32d05cw9q1"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors SummarizedExperiment tidyr]; };
 651   MultiBaC = derive2 { name="MultiBaC"; version="1.6.0"; sha256="028jc5kr84qi9m38g6xqf7cizif2qzg2j4ypvyav7syqb9n0927s"; depends=[ggplot2 Matrix MultiAssayExperiment pcaMethods plotrix ropls]; };
 652   MultiDataSet = derive2 { name="MultiDataSet"; version="1.24.0"; sha256="0rfs6jkzh1i4mj1pgfk4lwzmcl8pcwizra3q3282x3d8h2g98qnf"; depends=[Biobase BiocGenerics GenomicRanges ggplot2 ggrepel IRanges limma qqman S4Vectors SummarizedExperiment]; };
 653   MultiMed = derive2 { name="MultiMed"; version="2.18.0"; sha256="1cdkkspmwn67d685kgna8fr9w3mqrzg6qbv6vzr81knrwmhgxp1z"; depends=[]; };
 654   MungeSumstats = derive2 { name="MungeSumstats"; version="1.4.5"; sha256="14c8gx5pjppf7z0dcwdrg6cmbwg7k7k4782a13v47xiwhpxszxd2"; depends=[Biostrings BSgenome data_table dplyr GenomeInfoDb GenomicRanges googleAuthR httr IRanges jsonlite magrittr R_utils RCurl rtracklayer VariantAnnotation]; };
 655   MutationalPatterns = derive2 { name="MutationalPatterns"; version="3.6.0"; sha256="113b2hrc0n47qz144xhky93jcm6qh6flzadq5y0plga5jrz0rnwg"; depends=[BiocGenerics Biostrings BSgenome cowplot dplyr GenomeInfoDb GenomicRanges ggalluvial ggdendro ggplot2 IRanges magrittr NMF pracma purrr RColorBrewer S4Vectors stringr tibble tidyr VariantAnnotation]; };
 656   NADfinder = derive2 { name="NADfinder"; version="1.20.0"; sha256="0ynwf5ij694a46qa2fl4xvvxalh8a9mh6k0gxd3dfbi692lm6ihv"; depends=[ATACseqQC baseline BiocGenerics corrplot csaw EmpiricalBrownsMethod GenomeInfoDb GenomicAlignments GenomicRanges IRanges limma metap Rsamtools rtracklayer S4Vectors signal SummarizedExperiment trackViewer]; };
 657   NBAMSeq = derive2 { name="NBAMSeq"; version="1.12.0"; sha256="0rgyhijlv7knnb5z2zswxdicyblrxrnyliw1hlppdwsjwjyd3ixj"; depends=[BiocParallel DESeq2 genefilter mgcv S4Vectors SummarizedExperiment]; };
 658   NBSplice = derive2 { name="NBSplice"; version="1.14.0"; sha256="1hkcjn1icc6rmg13gnkya6xsmxa71pggdc9fzg8i47bs4cw0y6fb"; depends=[BiocParallel car edgeR ggplot2 MASS reshape2]; };
 659   NCIgraph = derive2 { name="NCIgraph"; version="1.44.0"; sha256="15srh42yrax35kkxiansx9aabraifyh70dxv17fg0vkf9pdndxic"; depends=[graph KEGGgraph R_methodsS3 RBGL RCy3]; };
 660   NOISeq = derive2 { name="NOISeq"; version="2.40.0"; sha256="0ah6adlhv4254jkssinn2ik8n811hd1nw85bnzqk2kwhl49nrk27"; depends=[Biobase Matrix]; };
 661   NPARC = derive2 { name="NPARC"; version="1.8.0"; sha256="1c9zi2a3jki589brg09hzmlzqxzlnq2xwd1674v0vrc70d99ybs9"; depends=[BiocParallel broom dplyr magrittr MASS rlang tidyr]; };
 662   NTW = derive2 { name="NTW"; version="1.46.0"; sha256="1nqf9nm86lirwrzn6mipj9y7j9zi2jl4675y66k92pvdh0cvcyxx"; depends=[mvtnorm]; };
 663   NanoMethViz = derive2 { name="NanoMethViz"; version="2.2.0"; sha256="0qxk3zhpd5axyzh5sa1dvvls386dzjmas2xkf0gpkgjyq4c7p2l1"; depends=[AnnotationDbi assertthat BiocSingular bsseq cpp11 data_table dplyr e1071 forcats fs GenomicRanges ggplot2 glue limma patchwork purrr Rcpp readr rlang Rsamtools RSQLite S4Vectors scales scico stringr SummarizedExperiment tibble tidyr withr zlibbioc]; };
 664   NanoStringDiff = derive2 { name="NanoStringDiff"; version="1.26.0"; sha256="0kqhdcqaikvrnfnw24m0sk569674zv3rvq345ysnmgyhj7xw3vpv"; depends=[Biobase matrixStats Rcpp]; };
 665   NanoStringNCTools = derive2 { name="NanoStringNCTools"; version="1.4.0"; sha256="19ah6rlqahkrb02zm2hrbdkz4z7rdpgzg6rm77q5pras9q6r75c7"; depends=[Biobase BiocGenerics Biostrings ggbeeswarm ggiraph ggplot2 ggthemes IRanges pheatmap RColorBrewer S4Vectors]; };
 666   NanoStringQCPro = derive2 { name="NanoStringQCPro"; version="1.28.0"; sha256="1vjhxzi4d66kmsm22dwbzq9w5i7y7ldfh41krb2755q23f7pd4rs"; depends=[AnnotationDbi Biobase knitr NMF org_Hs_eg_db png RColorBrewer]; };
 667   NanoTube = derive2 { name="NanoTube"; version="1.2.0"; sha256="0f50xb155dwxkzvirqhz1l4iqbs8m6qp6klihjlww12yhv967b67"; depends=[Biobase fgsea ggplot2 limma reshape]; };
 668   Nebulosa = derive2 { name="Nebulosa"; version="1.6.0"; sha256="0i37bsvppfn2djivg7hnvpjxnw0h42cxa31590w18c0mjgy7a553"; depends=[ggplot2 ks Matrix patchwork Seurat SingleCellExperiment SummarizedExperiment]; };
 669   NeighborNet = derive2 { name="NeighborNet"; version="1.14.0"; sha256="0s0aqnd91jylkkcrwm00dmvfd25fyfzdb7n0y0kbnc8d5m8njqkq"; depends=[graph]; };
 670   NetPathMiner = derive2 { name="NetPathMiner"; version="1.32.0"; sha256="10rgiy57ifmvz0m7z35q0xighxj4wnb0gvak45s249wagishppji"; depends=[igraph]; };
 671   NetSAM = derive2 { name="NetSAM"; version="1.36.0"; sha256="1vc4qnjr1qwcws3z5a665y790f5nw4ipv6ld5lzr5vdq09sxd5gr"; depends=[AnnotationDbi biomaRt DBI doParallel foreach GO_db igraph R2HTML seriation survival WGCNA]; };
 672   NeuCA = derive2 { name="NeuCA"; version="1.2.0"; sha256="0x2q7la9b3nfwlca0vnrkgankwpsrch2jhglrjn7qvnmc1zlk99p"; depends=[e1071 keras limma SingleCellExperiment]; };
 673   NewWave = derive2 { name="NewWave"; version="1.6.0"; sha256="1k4zyvylkidnkkqgjcqk1w43sx93ss86h6bsa62h7qa9186wxivb"; depends=[BiocSingular DelayedArray irlba Matrix SharedObject SingleCellExperiment SummarizedExperiment]; };
 674   NoRCE = derive2 { name="NoRCE"; version="1.8.0"; sha256="17awsr3l50p4isfpmvw1v6mk8lygc8xrhwdxgqp1icbng5i620j2"; depends=[AnnotationDbi biomaRt DBI dbplyr dplyr GenomicFeatures GenomicRanges ggplot2 GO_db igraph IRanges KEGGREST png RCurl reactome_db readr reshape2 RSQLite rtracklayer rWikiPathways S4Vectors SummarizedExperiment tidyr zlibbioc]; };
 675   NormalyzerDE = derive2 { name="NormalyzerDE"; version="1.14.0"; sha256="13z5vgnmx6d85ygb1hj3s24mq4jcnfhx6pgigi9ha73p8rimixs8"; depends=[ape Biobase car ggforce ggplot2 limma MASS matrixStats preprocessCore raster RcmdrMisc SummarizedExperiment vsn]; };
 676   NormqPCR = derive2 { name="NormqPCR"; version="1.42.0"; sha256="1jrif7cqippczyzf3nszbwxn0a58fvlmkcwb9as0ymv9qvh372vx"; depends=[Biobase qpcR RColorBrewer ReadqPCR]; };
 677   NuPoP = derive2 { name="NuPoP"; version="2.4.0"; sha256="0gxanqk1xarjgnczll3fj48hx0b7iizkixy8z94d3q28y5zcqvfz"; depends=[]; };
 678   NxtIRFcore = derive2 { name="NxtIRFcore"; version="1.2.1"; sha256="1mjd09ywdsmzn46qgh3gzalvid3d9b6wajwkj8siibx7rpmc0rwz"; depends=[AnnotationHub BiocFileCache BiocGenerics BiocParallel Biostrings BSgenome data_table DelayedArray DelayedMatrixStats fst genefilter GenomeInfoDb GenomicRanges ggplot2 HDF5Array IRanges magrittr NxtIRFdata plotly R_utils Rcpp RcppProgress rhdf5 rtracklayer S4Vectors SummarizedExperiment zlibbioc]; };
 679   OCplus = derive2 { name="OCplus"; version="1.70.0"; sha256="0smrb7k510x19pgpk53xl6c8gc8bccasg6d461jwzblx01mm4l2x"; depends=[akima multtest]; };
 680   ODER = derive2 { name="ODER"; version="1.2.0"; sha256="1vj3l4032sbjmbi508lzhl41gr3wpyma2ch8fm7arv5csksnn20s"; depends=[BiocFileCache BiocGenerics dasper data_table derfinder dplyr GenomeInfoDb GenomicRanges ggplot2 ggpubr ggrepel IRanges magrittr megadepth plyr purrr rtracklayer S4Vectors stringr tibble]; };
 681   OGRE = derive2 { name="OGRE"; version="1.0.0"; sha256="1lm6hqi9lc5xpdgbvwcjzhcjw7qp2ympi7w17s90mmki0g36rf6x"; depends=[AnnotationHub assertthat data_table DT GenomeInfoDb GenomicRanges ggplot2 Gviz IRanges rtracklayer S4Vectors shiny shinyBS shinydashboard shinyFiles tidyr]; };
 682   OLIN = derive2 { name="OLIN"; version="1.74.1"; sha256="0yv767qf9h6d9hyzlpwq2y5l874gyfn9mvrs8m5kjvzspnm6sisk"; depends=[limma locfit marray]; };
 683   OLINgui = derive2 { name="OLINgui"; version="1.70.0"; sha256="0pdnxp9i08faljafy91kxg7xiv9b2fh3k5c3gqdfrvwggx3d839x"; depends=[marray OLIN tkWidgets widgetTools]; };
 684   OMICsPCA = derive2 { name="OMICsPCA"; version="1.14.0"; sha256="0fldppwhjijw53s6q44g92n59pfmlz5049qsmna7nzqdh06l8wh6"; depends=[cluster clValid corrplot cowplot data_table factoextra FactoMineR fpc GenomeInfoDb ggplot2 HelloRanges IRanges kableExtra magick MASS MultiAssayExperiment NbClust OMICsPCAdata pdftools PerformanceAnalytics reshape2 rgl rmarkdown rtracklayer tidyr]; };
 685   OPWeight = derive2 { name="OPWeight"; version="1.18.0"; sha256="1k4qfbg29lll9hpkzbcbhfipyjn4rdpfyhm2wmr8a9jcp04fpl43"; depends=[MASS qvalue tibble]; };
 686   ORFhunteR = derive2 { name="ORFhunteR"; version="1.4.0"; sha256="1381knb35njc4dvbdr9jbkmyfyc87aacvham3ljmdq7llis0zz7b"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg38 data_table Peptides randomForest Rcpp rtracklayer stringr xfun]; };
 687   ORFik = derive2 { name="ORFik"; version="1.16.6"; sha256="0yiby6z7bx5n7p32nz8yhv630m3laawq07ck11lp6vw0sn9dg6s1"; depends=[AnnotationDbi BiocGenerics BiocParallel biomaRt biomartr Biostrings BSgenome cowplot data_table DESeq2 fst GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gridExtra httr IRanges jsonlite R_utils Rcpp Rsamtools rtracklayer S4Vectors SummarizedExperiment xml2]; };
 688   OSAT = derive2 { name="OSAT"; version="1.44.0"; sha256="1hd1qmxbsqr1x1k8iihji48n5dqqg0zpk0ccvgaq2qkdkf9ayp06"; depends=[]; };
 689   OTUbase = derive2 { name="OTUbase"; version="1.46.0"; sha256="1s41amahlqpb5gffmxd4rgdc1wwdjfzsr3jikv7flbb48965rjin"; depends=[Biobase Biostrings IRanges S4Vectors ShortRead vegan]; };
 690   OUTRIDER = derive2 { name="OUTRIDER"; version="1.14.0"; sha256="0app3h20d76nrrrm2yc856fsz6wvjm3rl0irlr8vfb85qws7zrfi"; depends=[BBmisc BiocGenerics BiocParallel data_table DESeq2 generics GenomicFeatures GenomicRanges ggplot2 heatmaply IRanges matrixStats pcaMethods pheatmap plotly plyr PRROC RColorBrewer Rcpp RcppArmadillo reshape2 S4Vectors scales SummarizedExperiment]; };
 691   OVESEG = derive2 { name="OVESEG"; version="1.12.0"; sha256="19z51p11g7a3bdr8ipq1pq7006z69n5qbfpj6xg50jbqv6vl7j6i"; depends=[BiocParallel fdrtool limma Rcpp SummarizedExperiment]; };
 692   OmaDB = derive2 { name="OmaDB"; version="2.12.0"; sha256="1ydpfdfa6gx2ca5damy5l806i9wjvpphz8wjzfbb3ijgza0dwl15"; depends=[ape Biostrings GenomicRanges httr IRanges jsonlite plyr topGO]; };
 693   OmicCircos = derive2 { name="OmicCircos"; version="1.34.0"; sha256="0644xcyk0li39xcyldqy927k06q6p6b8y07s3wl75dmd8gqwgvdp"; depends=[GenomicRanges]; };
 694   OmicsLonDA = derive2 { name="OmicsLonDA"; version="1.12.0"; sha256="125ijszmi6igsxhdg4kmgkc1sbsvsqk6ybqab73d1ly17w612z5q"; depends=[BiocGenerics BiocParallel ggplot2 gss plyr pracma SummarizedExperiment zoo]; };
 695   Omixer = derive2 { name="Omixer"; version="1.6.0"; sha256="12avwqrb27ljish8xk4gryjisa6zslx8b977k2dmgp19wm7f2f9x"; depends=[dplyr forcats ggplot2 gridExtra magrittr readr stringr tibble tidyselect]; };
 696   OmnipathR = derive2 { name="OmnipathR"; version="3.4.7"; sha256="1042hif90kcq8vf0qmqkkhmx014ammg5m7j96mxkd139nrdc6hzs"; depends=[checkmate crayon curl digest dplyr httr igraph jsonlite later logger magrittr progress purrr rappdirs readr readxl rlang rmarkdown stringr tibble tidyr tidyselect withr xml2 yaml]; };
 697   OncoScore = derive2 { name="OncoScore"; version="1.24.0"; sha256="02s6y5p1ncmlbaqf4fmgkvkbf913d6czz3gd9dqfwblsycxy2cxp"; depends=[biomaRt]; };
 698   OncoSimulR = derive2 { name="OncoSimulR"; version="3.4.0"; sha256="0ixlyrj7112rn2dnrfx226kqxfsisi2rccan9rxfcz1l1slkjvwk"; depends=[car data_table dplyr ggplot2 ggrepel graph gtools igraph RColorBrewer Rcpp Rgraphviz smatr stringr]; };
 699   OpenStats = derive2 { name="OpenStats"; version="1.8.0"; sha256="08r2id3f6gx5s1va4gr6m191c9y44m2c6s5lbxr8xhrnpi4c61p0"; depends=[AICcmodavg car Hmisc jsonlite knitr MASS nlme rlist summarytools]; };
 700   OrderedList = derive2 { name="OrderedList"; version="1.68.0"; sha256="15085hiyqn5ci5ahc674hp1j2lszdm6gm8acs1b87rg6pp5zjl4q"; depends=[Biobase twilight]; };
 701   Organism_dplyr = derive2 { name="Organism.dplyr"; version="1.24.0"; sha256="0j29f85d66c45ww3417xx376vpz0mmvga5n7h2cl1sd4h70b55as"; depends=[AnnotationDbi AnnotationFilter BiocFileCache DBI dbplyr dplyr GenomeInfoDb GenomicFeatures GenomicRanges IRanges rlang RSQLite S4Vectors tibble]; };
 702   OrganismDbi = derive2 { name="OrganismDbi"; version="1.38.1"; sha256="0mxnxj8x4hc21psz39mf7qwvh1fsn6qyjgl5qffk1xxmasf69619"; depends=[AnnotationDbi Biobase BiocGenerics BiocManager DBI GenomicFeatures GenomicRanges graph IRanges RBGL S4Vectors]; };
 703   Oscope = derive2 { name="Oscope"; version="1.26.0"; sha256="0rbz82k96k7d8nrbcr8mnz24kq8x95yw7m55vg64i66gm5gks168"; depends=[BiocParallel cluster EBSeq testthat]; };
 704   PAA = derive2 { name="PAA"; version="1.30.0"; sha256="0nq79hwinz95f0rifpk18r26vfvymns8dvib0mx4jjd13k75xgzz"; depends=[e1071 gplots gtools limma MASS mRMRe randomForest Rcpp ROCR sva]; };
 705   PADOG = derive2 { name="PADOG"; version="1.38.0"; sha256="156w598w39gf1mc4jm0p7c7hip4vlsms7jvb3dj5h789bgr0whnq"; depends=[AnnotationDbi Biobase doRNG foreach GSA hgu133a_db hgu133plus2_db KEGGdzPathwaysGEO KEGGREST limma nlme]; };
 706   PAIRADISE = derive2 { name="PAIRADISE"; version="1.12.0"; sha256="1p0wyxdbhcv88x0yrg03z1ml4qx6j7544z1xpgmz1i6sxp8k18mk"; depends=[abind BiocParallel nloptr S4Vectors SummarizedExperiment]; };
 707   PANR = derive2 { name="PANR"; version="1.42.0"; sha256="1g3165x4zgrw0x3yacq25k9jvfnad0yi1zbkmqxccivgnxh572ah"; depends=[igraph MASS pvclust RedeR]; };
 708   PAST = derive2 { name="PAST"; version="1.12.0"; sha256="14kv16nwgpdb7sqx6ba41pkdxqv2vpsfn6d8fwv24c7iihl8vac9"; depends=[doParallel dplyr foreach GenomicRanges ggplot2 iterators qvalue rlang rtracklayer S4Vectors]; };
 709   PCAN = derive2 { name="PCAN"; version="1.24.0"; sha256="1c4rwima7jzk18ib370rnyxraknzhkpil2jh2q22qhj5sgrnkpcx"; depends=[BiocParallel]; };
 710   PCAtools = derive2 { name="PCAtools"; version="2.8.0"; sha256="03s4dh008fys2rrcpzanc0892p63f6jyyvzc9m42jbi1dlkyx26v"; depends=[beachmat BH BiocParallel BiocSingular cowplot DelayedArray DelayedMatrixStats dqrng ggplot2 ggrepel lattice Matrix Rcpp reshape2]; };
 711   PDATK = derive2 { name="PDATK"; version="1.4.0"; sha256="1psnpjii3a2hv6nrlzxn4xb5180n6wwylv0csx5akgbn3mdqwm8n"; depends=[BiocGenerics BiocParallel caret clusterRepro ConsensusClusterPlus CoreGx data_table dplyr genefu ggplot2 ggplotify igraph MatrixGenerics matrixStats MultiAssayExperiment piano plyr pROC RColorBrewer reportROC rlang S4Vectors scales SummarizedExperiment survcomp survival survminer switchBox verification]; };
 712   PECA = derive2 { name="PECA"; version="1.32.0"; sha256="17lhbcq9pn9zi86vpv4b6ywj91aas4cyj17qv161jb093yfx8vwq"; depends=[affy aroma_affymetrix aroma_core genefilter limma preprocessCore ROTS]; };
 713   PERFect = derive2 { name="PERFect"; version="1.10.0"; sha256="036bvk3bbrpvg8dzikw2di76k9vmdd7i1x0hfdr24l4wdq81jaa6"; depends=[fitdistrplus ggplot2 Matrix phyloseq psych sn zoo]; };
 714   PFP = derive2 { name="PFP"; version="1.4.0"; sha256="1dglmiq24gmnw5lhi509d1f5w7iabgiyndr36cz7j9wzqrxnzf09"; depends=[clusterProfiler ggplot2 graph igraph KEGGgraph magrittr plyr tidyr]; };
 715   PICS = derive2 { name="PICS"; version="2.40.0"; sha256="04hysyaikw0dl2visnhyzvj21k6gamzsh5awlrgczaqcpxh5j7gf"; depends=[GenomicAlignments GenomicRanges IRanges Rsamtools]; };
 716   PING = derive2 { name="PING"; version="2.40.0"; sha256="0x75lq8igf5ppdbr7vs672cs6qi15wxrh4v5ir3qsyfv96n3i9dl"; depends=[BiocGenerics BSgenome fda GenomicRanges Gviz IRanges PICS S4Vectors]; };
 717   PLPE = derive2 { name="PLPE"; version="1.56.0"; sha256="07s2xgz733zr3a7z3nzvb3iimb2pb1xpixp8xwmyzi624ndms0v3"; depends=[Biobase LPE MASS]; };
 718   POMA = derive2 { name="POMA"; version="1.6.0"; sha256="1jd1k0kvxkinnd74kcm6yhihfal4d1b17zpwjg3m3492x2hg79dd"; depends=[broom caret ComplexHeatmap dplyr e1071 ggplot2 ggrepel glasso glmnet impute knitr limma magrittr mixOmics randomForest RankProd rmarkdown SummarizedExperiment tibble tidyr vegan]; };
 719   POWSC = derive2 { name="POWSC"; version="1.4.0"; sha256="071bvywmnjc08yrs912m7cfb0s9rf8rvsqyg0dnqsyh16cyc4nxw"; depends=[Biobase ggplot2 limma MAST pheatmap RColorBrewer SingleCellExperiment SummarizedExperiment]; };
 720   PPInfer = derive2 { name="PPInfer"; version="1.22.0"; sha256="0y7wagkskw8m22bq7sd99hqc1zn583lljqddncz2kcd8x57pims2"; depends=[biomaRt fgsea ggplot2 httr igraph kernlab STRINGdb yeastExpData]; };
 721   PREDA = derive2 { name="PREDA"; version="1.42.0"; sha256="10vl8d57x3hyn3145nyi2jg3fyb8xjhbgiica8fy90x6759avaqg"; depends=[annotate Biobase lokern multtest]; };
 722   PROMISE = derive2 { name="PROMISE"; version="1.48.0"; sha256="0pic8mvlv87hz9cmscr74vaxg4wnlsgmxlybhy4xnyzidg2cadyi"; depends=[Biobase GSEABase]; };
 723   PROPER = derive2 { name="PROPER"; version="1.28.0"; sha256="01frrjg3rwg2vwsg7hq27kp4k7in1y0fckz9xdfv0b0737ps7j1y"; depends=[edgeR]; };
 724   PROPS = derive2 { name="PROPS"; version="1.18.0"; sha256="1y2n16gnmqfp187sylh7v0fvsd4p9ij773ngviv57idwg9nrb8a1"; depends=[Biobase bnlearn reshape2 sva]; };
 725   PROcess = derive2 { name="PROcess"; version="1.72.0"; sha256="03ppx9zm9mvqb5r1mkrr3pxids8nllw2phqzpsb3bmz1x0yab4nh"; depends=[Icens]; };
 726   PSEA = derive2 { name="PSEA"; version="1.30.0"; sha256="0wdljlx7jvq78g9qp330ccqld4n9ilaaykqh527lljzc8p5vvbjx"; depends=[Biobase MASS]; };
 727   PSICQUIC = derive2 { name="PSICQUIC"; version="1.34.0"; sha256="0gkkxxbc2a7cin92qwn1masqfigyz9s4fhyy2daa17r3ckk4ccgx"; depends=[BiocGenerics biomaRt httr IRanges plyr RCurl]; };
 728   PSMatch = derive2 { name="PSMatch"; version="1.0.0"; sha256="027r2r70n9v54m6kww6bzaqvf7ahn42vh7fdbbb4m6xzbl62frmq"; depends=[BiocGenerics BiocParallel igraph Matrix MsCoreUtils ProtGenerics QFeatures S4Vectors]; };
 729   PWMEnrich = derive2 { name="PWMEnrich"; version="4.32.0"; sha256="031j563jcaakiasx1r8aflhqm0vq7j5628f9bv4kkyi5rhr3aix9"; depends=[BiocGenerics Biostrings evd gdata S4Vectors seqLogo]; };
 730   PanomiR = derive2 { name="PanomiR"; version="1.0.2"; sha256="14cmhsns15620ggqp41hl1dahanvqdlydxgr1aysq0h1145yhw31"; depends=[clusterProfiler dplyr forcats GSEABase igraph limma metap org_Hs_eg_db preprocessCore RColorBrewer rlang tibble withr]; };
 731   Path2PPI = derive2 { name="Path2PPI"; version="1.26.0"; sha256="0csqciqavnamyhsf7hx5c6x3ranr1h8wskzz09hf7rw65gxbn6jp"; depends=[igraph]; };
 732   PathNet = derive2 { name="PathNet"; version="1.36.0"; sha256="1xbwzvbnjgxby7xwgpl20qnx172lpzhm5z8rm3q1n3ww0n4z7pfk"; depends=[]; };
 733   PathoStat = derive2 { name="PathoStat"; version="1.22.0"; sha256="1f01vrncrw50jcvaivgqpjyc6h0ccphzifcw1aq03w39nrw55mz9"; depends=[ape BiocStyle ComplexHeatmap corpcor DESeq2 devtools dplyr DT edgeR ggplot2 glmnet gmodels knitr limma matrixStats phyloseq plotly plyr RColorBrewer rentrez reshape2 ROCR scales shiny shinyjs tidyr vegan webshot XML]; };
 734   PeacoQC = derive2 { name="PeacoQC"; version="1.6.0"; sha256="1b2jhph8nhx9iqia6cbs84aaz7srm7fchn7r0d55fmfnzg5cdr7z"; depends=[circlize ComplexHeatmap flowCore flowWorkspace ggplot2 gridExtra plyr]; };
 735   PepsNMR = derive2 { name="PepsNMR"; version="1.14.0"; sha256="04q4xminxkqzc88dqyrpddzdmcnj1n4ssspk3wnraplwrxhg1kcx"; depends=[ggplot2 gridExtra Matrix matrixStats ptw reshape2]; };
 736   PhIPData = derive2 { name="PhIPData"; version="1.4.0"; sha256="06fc0h2jn2v6n921rmxb37rdkk60v9il9x32w1ky2n5xaiqhx3yl"; depends=[BiocFileCache BiocGenerics cli edgeR GenomicRanges IRanges S4Vectors SummarizedExperiment]; };
 737   PharmacoGx = derive2 { name="PharmacoGx"; version="3.0.2"; sha256="16mpqz4amzydwihniwz7ivj8z9lb0z9rmldk3j4f2f8gy49l63pi"; depends=[Biobase BiocGenerics BiocParallel boot caTools checkmate coop CoreGx data_table downloader ggplot2 jsonlite magicaxis MultiAssayExperiment RColorBrewer Rcpp reshape2 S4Vectors SummarizedExperiment]; };
 738   PhenStat = derive2 { name="PhenStat"; version="2.32.0"; sha256="1g8g7452vkl06vphmmb7vv090dng58cx9v3d1vhsxsf6bzqny4ql"; depends=[car corrplot ggplot2 graph knitr lme4 logistf MASS msgps nlme nortest pingr reshape SmoothWin]; };
 739   PhenoGeneRanker = derive2 { name="PhenoGeneRanker"; version="1.4.0"; sha256="0wzf9c3iimcq8hc78ai188slbhkgzq94nmzcd4gxzlgmk44524ap"; depends=[doParallel dplyr foreach igraph Matrix]; };
 740   PhosR = derive2 { name="PhosR"; version="1.6.0"; sha256="0rgqr458m5hbai1jmcxv73ay74bgd44iwjz98b848qgx4imz8jp2"; depends=[BiocGenerics circlize dendextend dplyr e1071 GGally ggdendro ggplot2 ggpubr ggtext igraph limma network pcaMethods pheatmap preprocessCore RColorBrewer reshape2 rlang ruv S4Vectors SummarizedExperiment tidyr]; };
 741   PhyloProfile = derive2 { name="PhyloProfile"; version="1.10.5"; sha256="1ij0mjz9arpfp67vjv6mp3h2w1marwqqdbvb2sc7vmqd0wj8bnvg"; depends=[ape BiocStyle bioDist Biostrings colourpicker data_table DT energy ExperimentHub ggplot2 gridExtra OmaDB pbapply plyr RColorBrewer RCurl shiny shinyBS shinyFiles shinyjs xml2 yaml zoo]; };
 742   Pi = derive2 { name="Pi"; version="2.8.0"; sha256="0vpvpq7ss4x6qcz525zl71ysfh65zcqp13qym03s0v6r491gndnv"; depends=[BiocGenerics caret dnet dplyr GenomeInfoDb GenomicRanges ggnetwork ggplot2 ggrepel glmnet igraph IRanges lattice MASS Matrix osfr plot3D purrr randomForest RCircos readr ROCR scales supraHex tibble tidyr]; };
 743   Pigengene = derive2 { name="Pigengene"; version="1.22.0"; sha256="11bx3ivzfzh0bnmz77psz4vah0gm0vaa7pwbbkwjcra85sbzyxiz"; depends=[BiocStyle bnlearn C50 clusterProfiler DBI DOSE dplyr gdata ggplot2 GO_db graph impute MASS matrixStats openxlsx partykit pheatmap preprocessCore ReactomePA Rgraphviz WGCNA]; };
 744   PloGO2 = derive2 { name="PloGO2"; version="1.8.2"; sha256="0icflih4wkddj87zvq1f188v0rqb57cw9l9vygmz7vvlxis2x9ny"; depends=[GO_db GOstats httr lattice openxlsx xtable]; };
 745   PoDCall = derive2 { name="PoDCall"; version="1.4.0"; sha256="1k47igncvcz4sqpv59148nqcinabz5ifpl6xkcrry20gvbngnrca"; depends=[diptest DT ggplot2 gridExtra LaplacesDemon mclust purrr readr rlist shiny shinyjs]; };
 746   PoTRA = derive2 { name="PoTRA"; version="1.12.0"; sha256="0k93zj0mfs8pkr5cnf2y7bg9ynnwwr1acylsav8dcyz8vkc9r25k"; depends=[BiocGenerics graph graphite igraph org_Hs_eg_db]; };
 747   PrInCE = derive2 { name="PrInCE"; version="1.12.0"; sha256="02vnpdmns14g0qhizpify2p4mzkacj31ar31jmbxzg3bcbq2nz84"; depends=[Biobase dplyr forecast Hmisc LiblineaR magrittr MSnbase naivebayes progress purrr ranger Rdpack robustbase speedglm tester tidyr]; };
 748   PrecisionTrialDrawer = derive2 { name="PrecisionTrialDrawer"; version="1.11.0"; sha256="1miw8rj1zn1xv97dkgs66k9g21i6gp3j2m1l1akysskczgam3i2c"; depends=[BiocParallel biomaRt brglm data_table DT GenomicRanges ggplot2 ggrepel googleVis httr IRanges jsonlite LowMACAAnnotation magrittr matrixStats RColorBrewer reshape2 S4Vectors shiny shinyBS stringr XML]; };
 749   Prostar = derive2 { name="Prostar"; version="1.28.6"; sha256="1kjwzb94g91g9nw2kx8dcqq7iwld3flkaxaisvjg5rzi3306s96g"; depends=[DAPAR data_table highcharter htmlwidgets later MSnbase RColorBrewer rhandsontable shiny shinyAce shinyBS shinycssloaders shinyjqui shinyWidgets]; };
 750   ProtGenerics = derive2 { name="ProtGenerics"; version="1.28.0"; sha256="04hcgj4q8dbzp1a29rbww2bxxrg679pgys3m09p0ydkpsx76rq05"; depends=[]; };
 751   ProteoDisco = derive2 { name="ProteoDisco"; version="1.2.0"; sha256="1929aarf9al6di1r6z2n2ggdzblmfidikwswfg53nqanwwms31wa"; depends=[BiocGenerics BiocParallel Biostrings checkmate cleaver dplyr GenomeInfoDb GenomicFeatures GenomicRanges IRanges ParallelLogger plyr rlang S4Vectors tibble tidyr VariantAnnotation XVector]; };
 752   ProteoMM = derive2 { name="ProteoMM"; version="1.14.0"; sha256="0l5h4s77bv5wj6kj0zyj517acydqvd2sbxgl2fd22c1igwj9iqyl"; depends=[biomaRt gdata ggplot2 ggrepel gtools matrixStats]; };
 753   PubScore = derive2 { name="PubScore"; version="1.8.0"; sha256="18bmzvv6mxrdlh297i29q24vi5rc4x2mjaryi5asiki186x0hy8d"; depends=[dplyr ggplot2 ggrepel igraph intergraph network progress rentrez sna]; };
 754   PureCN = derive2 { name="PureCN"; version="2.2.0"; sha256="1rd6a9x2jsha5l1nw2xn57q7nr7jxjg1wylnv7iib77nwrb0sjfv"; depends=[Biobase BiocGenerics Biostrings data_table DNAcopy futile_logger GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 gridExtra IRanges Matrix mclust RColorBrewer rhdf5 Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation VGAM]; };
 755   Pviz = derive2 { name="Pviz"; version="1.30.0"; sha256="0ipsf10h9qbpmc4jj04x5gvxkbihicza8fw3qlh5qmwj83xyw5py"; depends=[Biostrings biovizBase data_table GenomicRanges Gviz IRanges]; };
 756   QDNAseq = derive2 { name="QDNAseq"; version="1.32.0"; sha256="0s360s72lfn9vjml88gg1m40n61s0dc66ilzgfjdcp65djdxxfvm"; depends=[Biobase CGHbase CGHcall DNAcopy future_apply GenomicRanges IRanges matrixStats R_utils Rsamtools]; };
 757   QFeatures = derive2 { name="QFeatures"; version="1.6.0"; sha256="1yz1wh81v4d7y109kbr51gial69l0g6mv7n28askbzpn5dl4gvwp"; depends=[AnnotationFilter Biobase BiocGenerics igraph IRanges lazyeval MsCoreUtils MultiAssayExperiment plotly ProtGenerics S4Vectors SummarizedExperiment]; };
 758   QSutils = derive2 { name="QSutils"; version="1.14.0"; sha256="0bbyk568z0bd2pmlw28hdibbwvfhs6wgcjdvyr8az6kqpz3yg326"; depends=[ape BiocGenerics Biostrings psych]; };
 759   QUBIC = derive2 { name="QUBIC"; version="1.24.0"; sha256="00annp5savi5z4f7m7kwsnijmhg7z4pwfj4lapr2wpsl51kga4fj"; depends=[biclust Matrix Rcpp RcppArmadillo]; };
 760   Qtlizer = derive2 { name="Qtlizer"; version="1.10.0"; sha256="023yr1szcsz8x78k2209242c21drszcmiyb7bs1n39qd2vi8ilhg"; depends=[curl GenomicRanges httr stringi]; };
 761   QuartPAC = derive2 { name="QuartPAC"; version="1.28.0"; sha256="1xfnnk896kng4m694rablk8gxq254d7nf5y8iz1gb0s688b20lyh"; depends=[data_table GraphPAC iPAC SpacePAC]; };
 762   QuasR = derive2 { name="QuasR"; version="1.36.0"; sha256="1m0c0rdakkdn4rr6dh51c6rs40cbxkvz93n6s0m2kc6fqjv9zplf"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicFeatures GenomicFiles GenomicRanges IRanges Rbowtie Rhtslib Rsamtools rtracklayer S4Vectors ShortRead]; };
 763   QuaternaryProd = derive2 { name="QuaternaryProd"; version="1.30.0"; sha256="0cq79377z73hhcvhzv5l8frss6wz6hmf7zvjh4v9jvrk8n0p3h7g"; depends=[dplyr Rcpp yaml]; };
 764   R3CPET = derive2 { name="R3CPET"; version="1.28.0"; sha256="1igxbx8wvf7jgzss2zv9w8bq7pdqr8g64dqm4j9nv20gagz6sh9m"; depends=[BiocGenerics clValid data_table GenomeInfoDb GenomicRanges ggbio ggplot2 Hmisc igraph IRanges pheatmap Rcpp RCurl reshape2 S4Vectors]; };
 765   R453Plus1Toolbox = derive2 { name="R453Plus1Toolbox"; version="1.46.0"; sha256="1vxgkhigmsk4f1cdn83rr8ysw3mj1lp0h7wjmxmm9pj97ig31v9b"; depends=[Biobase BiocGenerics biomaRt Biostrings BSgenome GenomicRanges IRanges R2HTML Rsamtools S4Vectors ShortRead SummarizedExperiment TeachingDemos VariantAnnotation xtable XVector]; };
 766   R4RNA = derive2 { name="R4RNA"; version="1.24.0"; sha256="12861114yw3dx2acqk2if5h11agfsdzl23pxzqy23gymxc1wm0z1"; depends=[Biostrings]; };
 767   RAREsim = derive2 { name="RAREsim"; version="1.0.0"; sha256="1q2cvjikisxzpiz9zqgldlyrz0ah19vnapn4c2p4yc1k5fqhc02f"; depends=[nloptr]; };
 768   RBGL = derive2 { name="RBGL"; version="1.72.0"; sha256="0ph089vxla49sng0pdwiyh9rpk9i96cbsx5q2jn46jj4x51ijc7y"; depends=[BH graph]; };
 769   RBM = derive2 { name="RBM"; version="1.28.0"; sha256="1yiyd78nkjh24dvj3vj86mc44bw9bb9maarji0w307bw71s94mgk"; depends=[limma marray]; };
 770   RBioinf = derive2 { name="RBioinf"; version="1.56.0"; sha256="1mm3i5fqvqal2y0lq2cdngy445dp8yv8rzvi59bjviwqzxp44m63"; depends=[graph]; };
 771   RCAS = derive2 { name="RCAS"; version="1.22.0"; sha256="05sj2ab7bxgf41gkmjaskhqm0198xlir1sw3f73x8rjg14rssmqf"; depends=[BiocGenerics Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 cowplot data_table DT genomation GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggseqlogo gprofiler2 IRanges knitr pbapply pheatmap plotly plotrix proxy ranger rmarkdown RSQLite rtracklayer S4Vectors]; };
 772   RCASPAR = derive2 { name="RCASPAR"; version="1.42.0"; sha256="0zzg0gsg6hcinskdj3625vk1pbzaxsfxf2m9d17gzc2jydjysfbz"; depends=[]; };
 773   RCM = derive2 { name="RCM"; version="1.12.0"; sha256="0v1dv69qlv0knaf96imi94mbpr8qz2a46hjn6rw7yfzfgsprnx7s"; depends=[alabama DBI edgeR ggplot2 MASS nleqslv phyloseq RColorBrewer reshape2 tensor tseries VGAM]; };
 774   RCSL = derive2 { name="RCSL"; version="1.4.0"; sha256="1b15jjd6v2slw94fd54y2xf638yrzqaw6qs4vzwan5ima6yl0bhk"; depends=[ggplot2 igraph NbClust pracma RcppAnnoy Rtsne umap]; };
 775   RCX = derive2 { name="RCX"; version="1.0.1"; sha256="1xrarll3fh8a3zgv507944klyq7kym87rpn7rk1kfsxs3zd94fsq"; depends=[igraph jsonlite plyr]; };
 776   RCy3 = derive2 { name="RCy3"; version="2.16.0"; sha256="0xbvi9k4lvva4njmgcjz2yjbhjp7n6if5622swnkyb01s178a7vi"; depends=[base64enc base64url BiocGenerics fs glue graph httr IRdisplay IRkernel RColorBrewer RCurl RJSONIO uchardet uuid XML]; };
 777   RCyjs = derive2 { name="RCyjs"; version="2.18.0"; sha256="105spxlmmr23h43hrym10h5jgizq3m5g1kmxzf42q8jzns042dqs"; depends=[base64enc BiocGenerics BrowserViz graph httpuv]; };
 778   RDRToolbox = derive2 { name="RDRToolbox"; version="1.46.0"; sha256="13c7701g9n6irqpfc1bcamg2pys8vsryq1y6q9mw28im73wf0caw"; depends=[MASS rgl]; };
 779   REBET = derive2 { name="REBET"; version="1.14.0"; sha256="03v6qdc9hz2p74s64v0vk4wxc4nkl4g465ygdnnyxk2qz99q79qa"; depends=[ASSET]; };
 780   REDseq = derive2 { name="REDseq"; version="1.42.0"; sha256="16iqqzk7jlwb3yzsamxmpm0424a7hphv5ajbfw9fzmsshll3q18p"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome BSgenome_Celegans_UCSC_ce2 ChIPpeakAnno IRanges multtest]; };
 781   REMP = derive2 { name="REMP"; version="1.20.1"; sha256="0176p0bjlmyp95ssiqkziyasm247n2jgv2ijcl34zy1d5jndv4gj"; depends=[AnnotationHub BiocGenerics BiocParallel Biostrings BSgenome caret doParallel foreach GenomeInfoDb GenomicRanges impute IRanges iterators kernlab minfi org_Hs_eg_db ranger readr rtracklayer S4Vectors settings SummarizedExperiment]; };
 782   RGMQL = derive2 { name="RGMQL"; version="1.16.0"; sha256="1bwcqh6hmxjwzszd2747yc9wadh1jj0dm04d9752vyf1hz5nnhkv"; depends=[BiocGenerics data_table dplyr GenomicRanges glue httr plyr RGMQLlib rJava rtracklayer S4Vectors xml2]; };
 783   RGSEA = derive2 { name="RGSEA"; version="1.30.0"; sha256="0p03fxf725c9ayk29ah48jd96ry3i0360mxphzmsdycc3sna6mrq"; depends=[BiocGenerics]; };
 784   RGraph2js = derive2 { name="RGraph2js"; version="1.24.0"; sha256="14ffqx419vd5qz1fbbdszvzvx4m8mqmd7sh4d0dyxy37k19l60q3"; depends=[digest graph rjson whisker]; };
 785   RIPAT = derive2 { name="RIPAT"; version="1.6.0"; sha256="0xqj14lgvgs2mms0khxvjl5pkacvv5b6vg5acn01dhg3bs83lbr6"; depends=[biomaRt GenomicRanges ggplot2 IRanges karyoploteR openxlsx plyr regioneR rtracklayer stringr]; };
 786   RITAN = derive2 { name="RITAN"; version="1.20.0"; sha256="0scn410jri1a1zr1j9kbk9884js6ps1v9a873fpzfdrrvb31dksd"; depends=[AnnotationFilter BgeeDB dynamicTreeCut EnsDb_Hsapiens_v86 ensembldb GenomicFeatures ggplot2 gplots gridExtra gsubfn hash igraph knitr linkcomm MCL plotrix png RColorBrewer reshape2 RITANdata sqldf STRINGdb]; };
 787   RIVER = derive2 { name="RIVER"; version="1.20.0"; sha256="1x02pkb7ff9zxlmwcdc8ck841bikhm8rpsn4jlkywy22s4mb074w"; depends=[Biobase ggplot2 glmnet pROC]; };
 788   RImmPort = derive2 { name="RImmPort"; version="1.24.0"; sha256="0ay2604wdksppbhgrd9zig380r7392zjaypfv6gd011wjh8gh05f"; depends=[data_table DBI dplyr plyr reshape2 RSQLite sqldf]; };
 789   RJMCMCNucleosomes = derive2 { name="RJMCMCNucleosomes"; version="1.20.0"; sha256="0m8rsvlyicp2bk6ax5sfssw6378z42d9bdp22v3j33vii3mla1fi"; depends=[BiocGenerics BiocParallel consensusSeekeR GenomeInfoDb GenomicRanges IRanges Rcpp S4Vectors]; };
 790   RLMM = derive2 { name="RLMM"; version="1.58.0"; sha256="0rmir7ab8bs45c1q49yf6apx9i4sr673b33zw12hmp76zlgabwsi"; depends=[MASS]; };
 791   RLSeq = derive2 { name="RLSeq"; version="1.2.0"; sha256="0lka8q9hpv3kx8xlx6glsdhc1z7y0ihfdi2qglsggy4iyzdnav0d"; depends=[AnnotationHub aws_s3 callr caretEnsemble circlize ComplexHeatmap dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggplotify ggprism pheatmap RColorBrewer regioneR RLHub rtracklayer valr VennDiagram]; };
 792   RLassoCox = derive2 { name="RLassoCox"; version="1.4.0"; sha256="19kvnhxwvw652cng9ngq2d9dnfaqxxd9qjsvhaqv8kb4kz2r9bfb"; depends=[glmnet igraph Matrix survival]; };
 793   RMassBank = derive2 { name="RMassBank"; version="3.6.1"; sha256="013j46ypgvr99j2grcxp251q8178a0x0xcsn9spdwba0cis2p836"; depends=[assertthat Biobase ChemmineOB ChemmineR data_table digest enviPat httr logger MSnbase mzR R_utils rcdk Rcpp RCurl readJDX rjson S4Vectors webchem XML yaml]; };
 794   RNAAgeCalc = derive2 { name="RNAAgeCalc"; version="1.8.0"; sha256="10d320bcdmn6mzcvivbphygnirs1znf1rnmirhzl1f978m50jp9j"; depends=[AnnotationDbi ggplot2 impute org_Hs_eg_db recount SummarizedExperiment]; };
 795   RNASeqPower = derive2 { name="RNASeqPower"; version="1.36.0"; sha256="0bv9xkkg30vr9lmybiialh0mimcvmcrsf0wm23r6jsmm8pqgv7wd"; depends=[]; };
 796   RNAdecay = derive2 { name="RNAdecay"; version="1.16.0"; sha256="0skv7hx83yq9c426am81555imdbbkysckv8py5ng3q56r67cgy45"; depends=[ggplot2 gplots nloptr scales TMB]; };
 797   RNAinteract = derive2 { name="RNAinteract"; version="1.44.0"; sha256="1f0kvpmkq6djfr6qx95fhmb2wblzz0iaffwwrqi6ibwbp4s3dmzv"; depends=[abind Biobase cellHTS2 geneplotter gplots hwriter ICS ICSNP lattice latticeExtra limma locfit RColorBrewer splots]; };
 798   RNAmodR = derive2 { name="RNAmodR"; version="1.10.0"; sha256="0nih7ix5bw9zc7grlw8a0yipx15r6n9ias1y30i6gr0z612whv6g"; depends=[BiocGenerics BiocParallel Biostrings BSgenome colorRamps GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 Gviz IRanges matrixStats Modstrings RColorBrewer reshape2 ROCR Rsamtools rtracklayer S4Vectors]; };
 799   RNAmodR_AlkAnilineSeq = derive2 { name="RNAmodR.AlkAnilineSeq"; version="1.10.0"; sha256="0qdh9h4vw0fc3dnsm1mb232pladp5hc0k8irxdmrs5akfqfcfc29"; depends=[BiocGenerics GenomicRanges Gviz IRanges RNAmodR S4Vectors]; };
 800   RNAmodR_ML = derive2 { name="RNAmodR.ML"; version="1.10.0"; sha256="17br1v3v36h11b3hc3qnxdic9zk2q5g8p99h2350nhq54z54g9j3"; depends=[BiocGenerics GenomicRanges IRanges ranger RNAmodR S4Vectors]; };
 801   RNAmodR_RiboMethSeq = derive2 { name="RNAmodR.RiboMethSeq"; version="1.10.0"; sha256="1g4ds43xaw6rzj5jxnahkbgpgarfjp4mygh8q5a80b7zi8z4w948"; depends=[BiocGenerics GenomicRanges Gviz IRanges RNAmodR S4Vectors]; };
 802   RNAsense = derive2 { name="RNAsense"; version="1.10.0"; sha256="19r4vvz9mj1jw5cw1afs4sx010vd2ssz2c4qspi2y6x12gnbhmnf"; depends=[ggplot2 NBPSeq qvalue SummarizedExperiment]; };
 803   ROC = derive2 { name="ROC"; version="1.72.0"; sha256="0yfq0d0j2bzqdnjs6l2h6p48kmv9wfphlqym3brgndlnadipq1v2"; depends=[knitr]; };
 804   ROCpAI = derive2 { name="ROCpAI"; version="1.8.0"; sha256="0vakvv2n5pzsfyy0iryafysrwrpzl15mg1wq1qs8y7hrrpc18cry"; depends=[boot fission knitr SummarizedExperiment]; };
 805   ROSeq = derive2 { name="ROSeq"; version="1.8.0"; sha256="00cp1293359s3h73xwjfnhdvl04h61f5jjbkzqan2q59j8bc5n92"; depends=[edgeR limma pbmcapply]; };
 806   ROTS = derive2 { name="ROTS"; version="1.24.0"; sha256="021a578p8kcl5yd9myiy0h2qp10r30ggnip2kp6xs7dx8nzic96r"; depends=[Biobase Rcpp]; };
 807   ROntoTools = derive2 { name="ROntoTools"; version="2.24.0"; sha256="1p84vx25lgynsbb7ng62wmbhjhk2qippfpar9nsbv7vhdl6yriyy"; depends=[boot graph KEGGgraph KEGGREST Rgraphviz]; };
 808   RPA = derive2 { name="RPA"; version="1.52.0"; sha256="0kwipm60h3g02xm0v8x8c18az4zqm2fqsn9m3n2wvy59lyzgd4cp"; depends=[affy BiocGenerics BiocStyle phyloseq rmarkdown]; };
 809   RProtoBufLib = derive2 { name="RProtoBufLib"; version="2.8.0"; sha256="1mvqwrm1y0vij66gdwgpf5l1h660wsi9jzjfs4ihw3zm4cb0q5pp"; depends=[]; };
 810   RRHO = derive2 { name="RRHO"; version="1.36.0"; sha256="1ryfalc6h465w5zv03jq8cgbslvzk70l83bfj5cy2fcxsjgzi1z9"; depends=[VennDiagram]; };
 811   RSVSim = derive2 { name="RSVSim"; version="1.36.0"; sha256="1x72ksb9r7850xpmi5qhw6fnmz6p831mdf1s9s9bgn67kz7940d5"; depends=[Biostrings GenomicRanges IRanges ShortRead]; };
 812   RSeqAn = derive2 { name="RSeqAn"; version="1.16.0"; sha256="0i16z4vqp7mqjjkn8xzzxadh88r3ikl04h7jkjnn777cn4596svm"; depends=[Rcpp]; };
 813   RTCA = derive2 { name="RTCA"; version="1.48.0"; sha256="06bcy13i6j2y4fxizhg9k6yv2grvb2fi4w98f3q4pf8b6w6hcczb"; depends=[Biobase gtools RColorBrewer]; };
 814   RTCGA = derive2 { name="RTCGA"; version="1.26.0"; sha256="1r8ivxgqi9c33rzg0bx699grgzpikiqhbdznnck1daj66ab78shs"; depends=[assertthat data_table dplyr ggplot2 ggthemes knitr purrr rvest scales stringi survival survminer viridis XML xml2]; };
 815   RTCGAToolbox = derive2 { name="RTCGAToolbox"; version="2.26.1"; sha256="12h5lj1a6v8cbmxvg8cw0iqzci3sl6ixv49qzzyz5srq4kidh40j"; depends=[BiocGenerics data_table DelayedArray GenomeInfoDb GenomicRanges httr limma RaggedExperiment RCircos RCurl RJSONIO S4Vectors stringr SummarizedExperiment survival TCGAutils XML]; };
 816   RTN = derive2 { name="RTN"; version="2.20.0"; sha256="06gxc3qpvkd488m4wsy0xqwgdpfakas934k3pqs8knq5ivc5hy2a"; depends=[car data_table igraph IRanges limma minet mixtools pheatmap pwr RedeR S4Vectors snow SummarizedExperiment viper]; };
 817   RTNduals = derive2 { name="RTNduals"; version="1.20.0"; sha256="0lglzmd4hsc4nlf6j7c5ixgkvs5dxgb1jmr3b5080flcn24s5a3p"; depends=[RTN]; };
 818   RTNsurvival = derive2 { name="RTNsurvival"; version="1.20.0"; sha256="1vw185sskn59b647gfk1hqdmbm4kkb856wmv8dqlnw88mj5pls14"; depends=[data_table dunn_test egg ggplot2 pheatmap RColorBrewer RTN RTNduals scales survival]; };
 819   RTopper = derive2 { name="RTopper"; version="1.42.0"; sha256="01rn7ak7h7q9clwkbgal8n9ivb27ppzqq9s3sxp44s3dz6x07835"; depends=[Biobase limma multtest]; };
 820   RUVSeq = derive2 { name="RUVSeq"; version="1.30.0"; sha256="001h07b074hvj16bjdp9llb9psphw7r6kpwhq61bj4519y6lpg7x"; depends=[Biobase EDASeq edgeR MASS]; };
 821   RUVcorr = derive2 { name="RUVcorr"; version="1.28.0"; sha256="1fwmghmzyjfbifb4mchp64v3n9fwzdc0bzlcvb96q6d1vwb9vs9k"; depends=[BiocParallel bladderbatch corrplot gridExtra lattice MASS psych reshape2 snowfall]; };
 822   RUVnormalize = derive2 { name="RUVnormalize"; version="1.30.0"; sha256="02jphy9y90jcl1i2pmsai188whb7ivb4zq0l2whzsz8hyanqgbwv"; depends=[Biobase RUVnormalizeData]; };
 823   RVS = derive2 { name="RVS"; version="1.18.0"; sha256="0yzzbj31gb86gvcchs6bbi69hbd39f2y4d3zv1g4lmyhbxzqw6zb"; depends=[GENLIB gRain kinship2 snpStats]; };
 824   RadioGx = derive2 { name="RadioGx"; version="2.0.0"; sha256="0biajaa10skv55r7g8gfa1gkz9cav1g9rr9bj6zfqdcyg4i9a9hi"; depends=[assertthat Biobase BiocGenerics BiocParallel caTools CoreGx data_table downloader magicaxis matrixStats RColorBrewer reshape2 S4Vectors scales SummarizedExperiment]; };
 825   RaggedExperiment = derive2 { name="RaggedExperiment"; version="1.20.1"; sha256="0j784nixky7rzfzwzmgfv7cd7x3lv1dkhnqg9j8g7jxgc8prha2v"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges Matrix MatrixGenerics S4Vectors SummarizedExperiment]; };
 826   RandomWalkRestartMH = derive2 { name="RandomWalkRestartMH"; version="1.16.0"; sha256="1cy4c1gw7gmz15hvl2bx6r4r1hjslymw74gmqir068qgbnn9jz86"; depends=[dnet igraph Matrix]; };
 827   RankProd = derive2 { name="RankProd"; version="3.22.0"; sha256="0rq14h9kjj84krgvfa09jbc5s8yks37fjbcv8z88daaib0j3fq2d"; depends=[gmp Rmpfr]; };
 828   RareVariantVis = derive2 { name="RareVariantVis"; version="2.24.0"; sha256="0m6r8ldilv8hl3qhvbxafv928f7xma7w1rj7nv0hzi21hg741kp1"; depends=[BiocGenerics BSgenome BSgenome_Hsapiens_UCSC_hg19 GenomeInfoDb GenomicFeatures GenomicRanges GenomicScores googleVis gtools IRanges phastCons100way_UCSC_hg19 S4Vectors SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; };
 829   RbcBook1 = derive2 { name="RbcBook1"; version="1.64.0"; sha256="1ivk4hjx1jzjg46cwwjmk7anqxwa9ddr34zf0xgbyfrbg25ilf44"; depends=[Biobase graph rpart]; };
 830   Rbec = derive2 { name="Rbec"; version="1.4.0"; sha256="0870yy8j77yw67y3ihyb10w8a6py33h4p27bgikqq2b9830f5cpw"; depends=[dada2 doParallel foreach ggplot2 Rcpp readr]; };
 831   Rbowtie = derive2 { name="Rbowtie"; version="1.36.0"; sha256="1ya1irwshsyy9l1fj51b04nv1ahq7a47ck7q19h2cly6yskc4x1q"; depends=[]; };
 832   Rbowtie2 = derive2 { name="Rbowtie2"; version="2.2.0"; sha256="0dhdx27vrkhd4fak0qb5q9amlcpi97xhf3ry39zk0ifx5zpjynkg"; depends=[magrittr Rsamtools]; };
 833   Rbwa = derive2 { name="Rbwa"; version="1.0.0"; sha256="1rf43p87p5397cbh9znl0qvrplid102qd3bgf310kk3kpkjdw56q"; depends=[]; };
 834   Rcade = derive2 { name="Rcade"; version="1.37.0"; sha256="1x8a4kas3bd4dzlwwiw781l9j2xa4sqmwbzblmsc23cp7kfbvffg"; depends=[baySeq GenomeInfoDb GenomicAlignments GenomicRanges IRanges plotrix rgl Rsamtools S4Vectors]; };
 835   RcisTarget = derive2 { name="RcisTarget"; version="1.16.0"; sha256="17fnjkg6rjqj33v7slg81skqag10y6dc14g5iv69gqshjal4w4im"; depends=[arrow AUCell BiocGenerics data_table dplyr GenomeInfoDb GenomicRanges GSEABase R_utils S4Vectors SummarizedExperiment tibble]; };
 836   Rcpi = derive2 { name="Rcpi"; version="1.32.2"; sha256="0rnwnybsllq2lh5c3v3pz5c010522wmhq2q8nlqws1yl4vyq82c2"; depends=[Biostrings doParallel foreach GOSemSim rcdk RCurl rjson]; };
 837   Rcwl = derive2 { name="Rcwl"; version="1.12.0"; sha256="1q10gzh3m46jaac1w5hhfv166vrh23q3fwn377cy0p0cq6mhqk9j"; depends=[basilisk batchtools BiocParallel codetools DiagrammeR R_utils S4Vectors shiny yaml]; };
 838   RcwlPipelines = derive2 { name="RcwlPipelines"; version="1.12.0"; sha256="1lcx926y437jkphldnydw71k64mibgh5k0cwxzsf8f9b0lwmhl02"; depends=[BiocFileCache git2r httr rappdirs Rcwl S4Vectors]; };
 839   Rdisop = derive2 { name="Rdisop"; version="1.56.0"; sha256="0cy1m1mch6d7csvlaacb5c54nz3f4caddjyfwbxq74qbzgx8mq07"; depends=[Rcpp]; };
 840   ReQON = derive2 { name="ReQON"; version="1.42.0"; sha256="1f5pplm8fy3wvl0b6n18gph4dq9i9x5qiyjrj0bk0kwlkbpba74r"; depends=[rJava Rsamtools seqbias]; };
 841   ReactomeContentService4R = derive2 { name="ReactomeContentService4R"; version="1.4.0"; sha256="1v4r1jybffjjz45ya2a8vx81i5fm911vqrba5qc846c5mikwxifp"; depends=[data_table doParallel foreach httr jsonlite magick]; };
 842   ReactomeGSA = derive2 { name="ReactomeGSA"; version="1.10.0"; sha256="1al69vrxsc3yw7d7vi8zvx6s5cac9dm0dzhkd96gqixjfr8lbsiq"; depends=[dplyr ggplot2 gplots httr jsonlite progress RColorBrewer tidyr]; };
 843   ReactomeGraph4R = derive2 { name="ReactomeGraph4R"; version="1.4.0"; sha256="07psjmygwvjkrz4dsgsa6hbw15dn97lkl5h1hk386yj94d5aplbk"; depends=[data_table doParallel foreach getPass jsonlite magrittr neo4r purrr ReactomeContentService4R rlang]; };
 844   ReactomePA = derive2 { name="ReactomePA"; version="1.40.0"; sha256="1fd72m2afxbbvbgwy8knp6fiq1h561plmsh4r8a08w21ngmkz2s5"; depends=[AnnotationDbi DOSE enrichplot ggplot2 ggraph graphite igraph reactome_db]; };
 845   ReadqPCR = derive2 { name="ReadqPCR"; version="1.42.0"; sha256="1999bn50w4sm8lr8ly6n773kswffcyrj3l6if37z1c17krfp58vl"; depends=[Biobase]; };
 846   RedeR = derive2 { name="RedeR"; version="2.0.1"; sha256="163rxsnj00nyxy96jx36z08wahbxr5lgh5r7rlk2kc1r5mv9hypn"; depends=[igraph]; };
 847   RefPlus = derive2 { name="RefPlus"; version="1.66.0"; sha256="0q0jklcbf7przhaxdb4w2qalin7ypds8s6v1yjlriqj62zkvd9bk"; depends=[affy affyPLM Biobase preprocessCore]; };
 848   RegEnrich = derive2 { name="RegEnrich"; version="1.6.0"; sha256="0nfdnbw69dl6zba3mrvjb1v4h8avgn30kzpfwl5fi5n07x6s7xpb"; depends=[BiocParallel BiocSet DESeq2 DOSE dplyr fgsea ggplot2 limma magrittr randomForest reshape2 S4Vectors SummarizedExperiment tibble WGCNA]; };
 849   RepViz = derive2 { name="RepViz"; version="1.12.0"; sha256="1y60br7rk1834izrsi74cnmw90klxdxgbwhlxcqsmvr3r1nblgwq"; depends=[biomaRt GenomicRanges IRanges Rsamtools S4Vectors]; };
 850   Repitools = derive2 { name="Repitools"; version="1.42.0"; sha256="1jasydq3wai7zxkgjph7fgy77i65qrsf520chaq474xf1j9hr9j8"; depends=[BiocGenerics Biostrings BSgenome cluster DNAcopy edgeR GenomeInfoDb GenomicAlignments GenomicRanges gplots gsmoothr IRanges MASS Ringo Rsamtools Rsolnp rtracklayer S4Vectors]; };
 851   ReportingTools = derive2 { name="ReportingTools"; version="2.36.0"; sha256="0r8cdqzfh1jxkghhk3j8x3y9kkmdyg9ibfhsic15jqkmp1im6khh"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category DESeq2 edgeR ggbio ggplot2 GOstats GSEABase hwriter IRanges knitr lattice limma PFAM_db R_utils XML]; };
 852   ResidualMatrix = derive2 { name="ResidualMatrix"; version="1.6.1"; sha256="1530706c7b53h9m8smgnaj63rgdbm3hd09n7jwy6zc0y6qcffckd"; depends=[DelayedArray Matrix S4Vectors]; };
 853   Rfastp = derive2 { name="Rfastp"; version="1.6.0"; sha256="06zzmdym2x72a99853qvh1a4snbmgysnmi6yckakdg6isizxm14p"; depends=[ggplot2 Rcpp reshape2 Rhtslib rjson zlibbioc]; };
 854   Rgin = derive2 { name="Rgin"; version="1.15.0"; sha256="1x5zj2d5rvsr2xh0ifpnrys9v91dal1xxhv5mmk16rs8wzwqpqba"; depends=[RcppEigen]; };
 855   Rgraphviz = derive2 { name="Rgraphviz"; version="2.40.0"; sha256="1r6ff7w2bmyfl1vzjvpgnhb8f5arwjlpab8fw5ph8fgyiqbcx94l"; depends=[graph]; };
 856   Rhdf5lib = derive2 { name="Rhdf5lib"; version="1.18.2"; sha256="1jpb8h7c724yz51zjfqs90bsqxgmy1rry2ra9qamsgqpr2j9764g"; depends=[]; };
 857   Rhisat2 = derive2 { name="Rhisat2"; version="1.12.0"; sha256="0hzair41l47kzykymd169a34pfhb98vrjgkgdf15m17csyz7pnv7"; depends=[GenomicFeatures GenomicRanges SGSeq]; };
 858   Rhtslib = derive2 { name="Rhtslib"; version="1.28.0"; sha256="07kws6afkxbmxq4w357mwwl712pdd16alvz7iqijjd2x7rjchj2f"; depends=[zlibbioc]; };
 859   RiboCrypt = derive2 { name="RiboCrypt"; version="1.2.0"; sha256="071y96ilsb9l5jfdsyhjpm69aqz8v8hjis2izvqwvds4ia2j1mhh"; depends=[BiocGenerics BiocParallel Biostrings data_table dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges ORFik plotly rlang]; };
 860   RiboDiPA = derive2 { name="RiboDiPA"; version="1.4.1"; sha256="1qr7505kvgabxmr5mp4smvz0x7pwp6n64s60iynsz08r2p3cf77c"; depends=[BiocFileCache BiocGenerics data_table DESeq2 doParallel elitism foreach GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges matrixStats qvalue Rcpp reldist Rsamtools S4Vectors]; };
 861   RiboProfiling = derive2 { name="RiboProfiling"; version="1.26.0"; sha256="08m4rc530bkzcc43iwzg2fw9cjlf4wc2d8akv5vblsb42xdn8sqp"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr reshape2 Rsamtools rtracklayer S4Vectors sqldf]; };
 862   Ringo = derive2 { name="Ringo"; version="1.60.0"; sha256="1znmxzp1g1jim5za2gi7mk0r2ac4q3wd609xncvq23s0jww0nzpc"; depends=[Biobase BiocGenerics genefilter lattice limma Matrix RColorBrewer vsn]; };
 863   Risa = derive2 { name="Risa"; version="1.38.0"; sha256="0l3k04s0wh82bfhy561m2j7zj2ckx1rdgvlbdnbkx3qr6d905cj9"; depends=[affy Biobase biocViews Rcpp xcms]; };
 864   Rmagpie = derive2 { name="Rmagpie"; version="1.52.0"; sha256="1i9cs3jxg9izskq2n2f4n5k9dkivnm64knmzgmdl9xhsqdabih2v"; depends=[Biobase e1071 kernlab pamr]; };
 865   Rmmquant = derive2 { name="Rmmquant"; version="1.14.0"; sha256="1s2sb2f4kc20anmhcrgy988yam1iyk383ia7mci0gb32dsblrpfk"; depends=[BiocStyle DESeq2 devtools GenomicRanges org_Mm_eg_db Rcpp S4Vectors SummarizedExperiment TBX20BamSubset TxDb_Mmusculus_UCSC_mm9_knownGene]; };
 866   RnBeads = derive2 { name="RnBeads"; version="2.14.0"; sha256="1r5njn90893j3p0sz335w8xq0fkf6q7ai2w23qacnm2zfhh6k345"; depends=[BiocGenerics cluster ff fields GenomicRanges ggplot2 gplots gridExtra illuminaio IRanges limma MASS matrixStats methylumi plyr S4Vectors]; };
 867   RnaSeqSampleSize = derive2 { name="RnaSeqSampleSize"; version="2.6.0"; sha256="1v5bjdwzv0kram0q0cyghjn8cc2zd58qbbz6s8xa12avl0cbnxhn"; depends=[biomaRt dplyr edgeR ggplot2 ggpubr heatmap3 KEGGREST matlab Rcpp recount RnaSeqSampleSizeData SummarizedExperiment tidyr tidyselect]; };
 868   Rnits = derive2 { name="Rnits"; version="1.29.0"; sha256="0m6afic9p7synmngkn7zyf53saqnrmgydjbk41k0w814i46dcd6h"; depends=[affy Biobase boot ggplot2 impute limma qvalue reshape2]; };
 869   RolDE = derive2 { name="RolDE"; version="1.0.0"; sha256="0jynxvwrz8f40sj2iha3g25znv4z097hm3snhzm36bs0h7nvv8sq"; depends=[doParallel doRNG foreach matrixStats nlme qvalue rngtools ROTS SummarizedExperiment]; };
 870   RpsiXML = derive2 { name="RpsiXML"; version="2.38.0"; sha256="0x4nph4xss4piq4fgijjjj33yrqqfdbsgn9wvqy17nglvz5gi7bi"; depends=[annotate AnnotationDbi Biobase graph hypergraph RBGL XML]; };
 871   Rqc = derive2 { name="Rqc"; version="1.30.0"; sha256="11j8m69zdcmpjb3xzr4s8sqmv8aqgl8q7k81gnd09l3nyjzy0h1k"; depends=[BiocGenerics BiocParallel BiocStyle Biostrings biovizBase GenomicAlignments GenomicFiles ggplot2 IRanges knitr markdown plyr Rcpp reshape2 Rsamtools S4Vectors shiny ShortRead]; };
 872   Rsamtools = derive2 { name="Rsamtools"; version="2.12.0"; sha256="1wll703if12qrn0d11ljwf7rqhs4lb27fzyyz1hqwvzn3v361s10"; depends=[BiocGenerics BiocParallel Biostrings bitops GenomeInfoDb GenomicRanges IRanges Rhtslib S4Vectors XVector zlibbioc]; };
 873   Rsubread = derive2 { name="Rsubread"; version="2.10.5"; sha256="0n9qqbkj2lgxkia6kfpfz06wbc1lvw24qyvn88f48zw5nh0rsrs2"; depends=[Matrix]; };
 874   Rtpca = derive2 { name="Rtpca"; version="1.6.0"; sha256="1cv0yj3j2cndyb0827raw3x7gi3li0nj2q0s71apj2bvl74y2h27"; depends=[Biobase dplyr fdrtool ggplot2 pROC tibble tidyr]; };
 875   Rtreemix = derive2 { name="Rtreemix"; version="1.58.0"; sha256="0n9pmmn0mzj6zi303zzkmcww8f23xydgvw6bz5cx7sswlqvsixvm"; depends=[Biobase graph Hmisc]; };
 876   S4Vectors = derive2 { name="S4Vectors"; version="0.34.0"; sha256="0j3ybhzdhlhw8527nks3mjja28asjya2n0m0rjkh4bw66rkfys4k"; depends=[BiocGenerics]; };
 877   SAIGEgds = derive2 { name="SAIGEgds"; version="1.10.0"; sha256="0qvwyaiqkgdi9aqhx7w3cv1rrap5c6zcnprac6lixp5ib9a5nc7i"; depends=[gdsfmt Rcpp RcppArmadillo RcppParallel SeqArray SPAtest]; };
 878   SANTA = derive2 { name="SANTA"; version="2.32.0"; sha256="0d501mb84a95n3r8zirrhkm6l7kl47rfkzcrag3cpmd2zl0nppq0"; depends=[igraph Matrix]; };
 879   SBGNview = derive2 { name="SBGNview"; version="1.10.0"; sha256="0d4phx2bc77cvvy7lkn2mvkwwy5mld73rpis8q88c85sda07yakl"; depends=[AnnotationDbi bookdown httr igraph KEGGREST knitr pathview Rdpack rmarkdown rsvg SBGNview_data SummarizedExperiment xml2]; };
 880   SBMLR = derive2 { name="SBMLR"; version="1.92.0"; sha256="05qs42b8ssxqlapcy9cn99hkgr3yak0bb97zbc548wp1yfhwmdqb"; depends=[deSolve XML]; };
 881   SC3 = derive2 { name="SC3"; version="1.24.0"; sha256="179x0x9zr5ffqhr33va3x7ph5r1mzhy1j9xdmmf8qga0jw80alz2"; depends=[BiocGenerics cluster doParallel doRNG e1071 foreach ggplot2 pheatmap Rcpp RcppArmadillo robustbase ROCR rrcov S4Vectors shiny SingleCellExperiment SummarizedExperiment WriteXLS]; };
 882   SCAN_UPC = derive2 { name="SCAN.UPC"; version="2.38.0"; sha256="0riz6fmq9rsdkpfwyzva15xrfhdpab42yn2zklv6663pwha64wjj"; depends=[affy affyio Biobase Biostrings foreach GEOquery IRanges MASS oligo sva]; };
 883   SCANVIS = derive2 { name="SCANVIS"; version="1.10.0"; sha256="136kzmgpyn3jxnsc60x6x93zb5c65ji5221z89178yfvr7h48v17"; depends=[IRanges plotrix RCurl rtracklayer]; };
 884   SCATE = derive2 { name="SCATE"; version="1.6.0"; sha256="14zm5y3m03wxjd8fbl0hn5fvmyv5hlwcfh38hzzv68jfmhyyasfh"; depends=[GenomicAlignments GenomicRanges mclust preprocessCore Rtsne SCATEData splines2 xgboost]; };
 885   SCArray = derive2 { name="SCArray"; version="1.4.0"; sha256="1yd251b5wdgjg9g2xjj0b4h5bbfj9mhpsll5kzq5cmw31qz6q6b9"; depends=[BiocGenerics DelayedArray DelayedMatrixStats gdsfmt IRanges S4Vectors SingleCellExperiment SummarizedExperiment]; };
 886   SCBN = derive2 { name="SCBN"; version="1.14.0"; sha256="1hg2rwaag0vnh8wq2lwi62qjk13apdwhhbxnp93sry4h7gvkpxaa"; depends=[]; };
 887   SCFA = derive2 { name="SCFA"; version="1.6.0"; sha256="0kqwjhrjqj8q9zijajyyw7yy9dbzacard8imgc0p3p9iyssa9g9n"; depends=[BiocParallel cluster clusterCrit glmnet igraph keras Matrix matrixStats psych RhpcBLASctl survival tensorflow]; };
 888   SCOPE = derive2 { name="SCOPE"; version="1.8.0"; sha256="1vif96msq93j0rmz5ak898wbjbw6l649n0jhbd5jqjyg9h47rm8s"; depends=[BiocGenerics Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 DescTools DNAcopy doParallel foreach GenomeInfoDb GenomicRanges gplots IRanges RColorBrewer Rsamtools S4Vectors]; };
 889   SCnorm = derive2 { name="SCnorm"; version="1.18.0"; sha256="0bd1y7nakacc1hl6dn8g47wx1z132qpi459626szc2ahmi62bq5d"; depends=[BiocGenerics BiocParallel cluster data_table forcats ggplot2 moments quantreg S4Vectors SingleCellExperiment SummarizedExperiment]; };
 890   SDAMS = derive2 { name="SDAMS"; version="1.16.0"; sha256="1gqyzd3dmb3ba9ymjk4x9kbj10cx7iggbp3iv2a3nl2il7h3kkq1"; depends=[qvalue SummarizedExperiment trust]; };
 891   SELEX = derive2 { name="SELEX"; version="1.28.0"; sha256="0kf81k9r5rsihx7w5rh0hb7b6pwmn0qxikwy443q6j30m2b26rbw"; depends=[Biostrings rJava]; };
 892   SEPIRA = derive2 { name="SEPIRA"; version="1.16.0"; sha256="0dz7d0vvzg9ak2gs2pgciqabpjgqwhs236gfa48m71cy13khsdpz"; depends=[corpcor limma]; };
 893   SEtools = derive2 { name="SEtools"; version="1.10.0"; sha256="0s382ph3v3ynx5j90rzsh6ix9h8776m7dmn0pr8shc9gy5ixv54z"; depends=[BiocParallel data_table DESeq2 edgeR Matrix openxlsx S4Vectors sechm SummarizedExperiment sva]; };
 894   SGSeq = derive2 { name="SGSeq"; version="1.30.0"; sha256="0hz45367i70wl97silnimicdvs3g41zyf8syc6igz6471wbwkxwp"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges igraph IRanges Rsamtools rtracklayer RUnit S4Vectors SummarizedExperiment]; };
 895   SIAMCAT = derive2 { name="SIAMCAT"; version="2.0.1"; sha256="05r9sv41l812hnz6dq2hzgk29y25raqqzn0mcw4lcqv6zlm60k0s"; depends=[beanplot corrplot glmnet gridBase gridExtra infotheo lgr LiblineaR lmerTest matrixStats mlr3 mlr3learners mlr3tuning paradox phyloseq pROC progress PRROC RColorBrewer scales stringr]; };
 896   SICtools = derive2 { name="SICtools"; version="1.26.0"; sha256="1vj5y3xysvf113f2iy2n10yzm3xy30m7g3brirydrj9vk73ssdcs"; depends=[Biostrings doParallel GenomicRanges IRanges matrixStats plyr Rsamtools stringr]; };
 897   SIM = derive2 { name="SIM"; version="1.66.0"; sha256="0kvayxf4h7l9410v0gafbg31xkc8xcl1cbilfgln4l5pv42wnrl4"; depends=[globaltest quantreg quantsmooth]; };
 898   SIMAT = derive2 { name="SIMAT"; version="1.28.0"; sha256="06f4py4gk2gqdas1gwz43by1m4k5b617l58a36rm294w9hvwi03b"; depends=[ggplot2 mzR Rcpp reshape2]; };
 899   SIMD = derive2 { name="SIMD"; version="1.14.0"; sha256="1sbqfrawrh2yndzwl0c0dlpsj5zy264r725r4awzzawnxac3c0k7"; depends=[edgeR methylMnM statmod]; };
 900   SIMLR = derive2 { name="SIMLR"; version="1.22.0"; sha256="1y26296n42w18ra9c35qfqlxgxk16hz051139g82ki9aydh6b0mm"; depends=[Matrix pracma Rcpp RcppAnnoy RSpectra]; };
 901   SISPA = derive2 { name="SISPA"; version="1.26.0"; sha256="17zljr5vr9zh5cwah6dya3nyzv1266wlfm558r8j1zccirahjvf7"; depends=[changepoint data_table genefilter ggplot2 GSVA plyr]; };
 902   SLqPCR = derive2 { name="SLqPCR"; version="1.62.0"; sha256="1336jfm13yhn1anzl7kjgqhvvk6gy8h0ikzi9iqrrm0sxhjyyb74"; depends=[]; };
 903   SMAD = derive2 { name="SMAD"; version="1.12.0"; sha256="1qwdwslb5sx07sgjafv7yd69isbn7sf60yisfry64bkc3h8rrmmb"; depends=[dplyr magrittr Rcpp RcppAlgos tidyr]; };
 904   SMAP = derive2 { name="SMAP"; version="1.60.0"; sha256="11c0br8kv93bzdn4y4xrkl6pkqdpn4zzyx31dqkq5bz4vvjfmz47"; depends=[]; };
 905   SMITE = derive2 { name="SMITE"; version="1.24.0"; sha256="0klqxzaypidfzgcxfa1lnrlsv08zkqwf5y82ldac7bpnnyr91z1b"; depends=[AnnotationDbi Biobase BioNet geneLenDataBase GenomicRanges ggplot2 goseq Hmisc igraph IRanges KEGGREST org_Hs_eg_db plyr reactome_db S4Vectors scales]; };
 906   SNAGEE = derive2 { name="SNAGEE"; version="1.36.0"; sha256="0zjn0qjyhpnfzabgi5rv1zhblfwz4rdldp7pa18zkayflhfhql5i"; depends=[SNAGEEdata]; };
 907   SNPRelate = derive2 { name="SNPRelate"; version="1.30.1"; sha256="1j3cz45g0bm48hqm6zm8zyfsmjb08cb7p52yw8r4jmld3jci33cr"; depends=[gdsfmt]; };
 908   SNPediaR = derive2 { name="SNPediaR"; version="1.22.0"; sha256="1qg1arrf9pv59hzmncmfhw9w2npk6mm068c6ghx527vja7g3lcxd"; depends=[jsonlite RCurl]; };
 909   SNPhood = derive2 { name="SNPhood"; version="1.26.0"; sha256="186qcscxgpjxc3c875yvnc75xv4dmmjpy7ci2glabw9sy5p2vz2a"; depends=[BiocGenerics BiocParallel Biostrings checkmate cluster data_table DESeq2 GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges lattice RColorBrewer reshape2 Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; };
 910   SOMNiBUS = derive2 { name="SOMNiBUS"; version="1.4.0"; sha256="0xjrn2anfsw6d48lb2kp1zxj2d4cn6gr6wb6cfllwxiwdq635lyc"; depends=[Matrix mgcv VGAM]; };
 911   SPEM = derive2 { name="SPEM"; version="1.36.0"; sha256="1nnyx7jaqz2cj7zmm4dfv5n9m4willwv411q0wiqsjbgm60j37ak"; depends=[Biobase Rsolnp]; };
 912   SPIA = derive2 { name="SPIA"; version="2.48.0"; sha256="1s6mx463xgy8hdifksb824brmrr07k38yksdrbk38v0zniyns97w"; depends=[KEGGgraph]; };
 913   SPLINTER = derive2 { name="SPLINTER"; version="1.22.0"; sha256="1kvin1kma85p4q3jasm0q631dalndq021r4wx4vls34mhglhrrzx"; depends=[biomaRt Biostrings BSgenome_Mmusculus_UCSC_mm9 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 googleVis Gviz IRanges plyr S4Vectors seqLogo stringr]; };
 914   SPONGE = derive2 { name="SPONGE"; version="1.18.1"; sha256="071w946cdvc8x277893ji74l336j99j73k3cxawi64k39c1qqsnd"; depends=[Biobase biomaRt caret ComplexHeatmap cvms data_table doRNG dplyr expm foreach ggplot2 ggpubr ggridges glmnet gRbase igraph iterators logging MASS MetBrewer miRBaseConverter ppcor randomForest rlang stringr tidyr tidyverse tnet]; };
 915   SPOTlight = derive2 { name="SPOTlight"; version="1.0.0"; sha256="1h6w02ya3fcg13rb0phzfx6qdw4mhbgsq6jai1h2jab8whcggfpn"; depends=[ggplot2 Matrix matrixStats NMF nnls SingleCellExperiment]; };
 916   SPsimSeq = derive2 { name="SPsimSeq"; version="1.6.0"; sha256="11symjnpyp6yb26071gnzgp3immhjyyzirwb6j7gnh8hmgzmcpz9"; depends=[edgeR fitdistrplus Hmisc limma mvtnorm phyloseq SingleCellExperiment WGCNA]; };
 917   SQLDataFrame = derive2 { name="SQLDataFrame"; version="1.10.3"; sha256="0fxl2if1bnw79md4lkz8lq51j7hi05bhf2k66605xwgfmz5q9lyf"; depends=[BiocGenerics DBI dbplyr dplyr lazyeval RSQLite S4Vectors tibble]; };
 918   SQUADD = derive2 { name="SQUADD"; version="1.46.0"; sha256="13g381j3xbzdh6xwmgf3d1jsr39zd523q1kldpw3cmp01asykcwm"; depends=[RColorBrewer]; };
 919   SRAdb = derive2 { name="SRAdb"; version="1.58.1"; sha256="11590a9zayqy4h1f9mfq9mdfj0d4i3amlb4q5vpc5ibir7l9a4bk"; depends=[GEOquery graph RCurl RSQLite]; };
 920   STAN = derive2 { name="STAN"; version="2.24.0"; sha256="18qa8fa6n9n965h0rwbsyfd14snh2n96rwfi1l1dg7wdrksyr8wx"; depends=[BiocGenerics GenomeInfoDb GenomicRanges Gviz IRanges poilog Rsolnp S4Vectors]; };
 921   STATegRa = derive2 { name="STATegRa"; version="1.32.0"; sha256="157jm77mh12p5wdik1xm00p8r7x692gw5sb2dphkjf6fkc53sxk0"; depends=[affy Biobase calibrate edgeR foreach ggplot2 gplots gridExtra limma MASS]; };
 922   STRINGdb = derive2 { name="STRINGdb"; version="2.8.4"; sha256="1jn6080v6097zpqsr4gfbx31gqqdhpzjrk63avk3v3xwawmf2379"; depends=[gplots hash igraph plotrix plyr png RColorBrewer RCurl sqldf]; };
 923   STROMA4 = derive2 { name="STROMA4"; version="1.20.0"; sha256="14qz7napk9kmga7gvhp34zh0kdkwzqx57q79famz1lyanzvibcij"; depends=[Biobase BiocParallel cluster matrixStats]; };
 924   STdeconvolve = derive2 { name="STdeconvolve"; version="1.0.0"; sha256="092gsmnp70wqpw21yxicpm29qwp27zxz60d026i6mfszhd48abxx"; depends=[BiocParallel clue ggplot2 liger Matrix mgcv reshape2 scatterpie slam topicmodels viridis]; };
 925   SWATH2stats = derive2 { name="SWATH2stats"; version="1.26.0"; sha256="0n6ap58lbn3rbaqb50244byam2fc62q85zl2a5bws5bsfccnvzk3"; depends=[biomaRt data_table ggplot2 reshape2]; };
 926   SamSPECTRAL = derive2 { name="SamSPECTRAL"; version="1.50.0"; sha256="0p4a9f4aa714jn1z4r9177jqin11qi3ln3pdjb0vblcj435yhpdm"; depends=[]; };
 927   Scale4C = derive2 { name="Scale4C"; version="1.18.0"; sha256="0n63sp8jalm8il1vyl1ls9cbbzs3jb227kq6rdw436mmnk5d7hik"; depends=[GenomicRanges IRanges smoothie SummarizedExperiment]; };
 928   ScaledMatrix = derive2 { name="ScaledMatrix"; version="1.4.1"; sha256="05gxr41nb1jqhv357rfha4062kszvrmkr36mhkjsf7kgnzf0p8hz"; depends=[DelayedArray Matrix S4Vectors]; };
 929   Sconify = derive2 { name="Sconify"; version="1.16.0"; sha256="0nm6z5dmnqd1bw1xpw7ljjlrbccqjmpcb1ds83yjy5wc9i0m2jdb"; depends=[dplyr flowCore FNN ggplot2 magrittr readr Rtsne tibble]; };
 930   SemDist = derive2 { name="SemDist"; version="1.30.0"; sha256="01pjcxhbyhbdcfw8jrjq04n4xi659ah3mx176rf0x7dll732y161"; depends=[annotate AnnotationDbi GO_db]; };
 931   SeqArray = derive2 { name="SeqArray"; version="1.36.3"; sha256="0b1zcays48s23k3z7p0k7l6sb89a8zn73xpdg38hbna016g92wjx"; depends=[Biostrings gdsfmt GenomeInfoDb GenomicRanges IRanges S4Vectors]; };
 932   SeqGSEA = derive2 { name="SeqGSEA"; version="1.36.0"; sha256="0jpj0hksbbgzfr0k5f4zwm2ivdwrm00mcz8n8q0m35k44bj311b0"; depends=[Biobase biomaRt DESeq2 doParallel]; };
 933   SeqGate = derive2 { name="SeqGate"; version="1.6.0"; sha256="0fa5spf66d1x0747ikgk822mpcjbvb0y4slmq636njxgi6n739wk"; depends=[BiocManager GenomicRanges S4Vectors SummarizedExperiment]; };
 934   SeqSQC = derive2 { name="SeqSQC"; version="1.18.0"; sha256="1687klbjypwhd6qg7s965s7n47wf0kyfsn734wg27zv6mvfhck9r"; depends=[e1071 ExperimentHub gdsfmt GenomicRanges GGally ggplot2 IRanges rbokeh RColorBrewer reshape2 rmarkdown S4Vectors SNPRelate]; };
 935   SeqVarTools = derive2 { name="SeqVarTools"; version="1.34.0"; sha256="1giabkg0q9fyqqm1fqw05h6dhvs58w3x1d8jp7xddh5dqisk4b3a"; depends=[Biobase BiocGenerics data_table gdsfmt GenomicRanges GWASExactHW IRanges logistf Matrix S4Vectors SeqArray]; };
 936   SharedObject = derive2 { name="SharedObject"; version="1.10.0"; sha256="0z33jp0vlx2d9wn8zi28hd5ilzp1rql5zvylx1vm71bfsjpy7nlc"; depends=[BH BiocGenerics Rcpp]; };
 937   ShortRead = derive2 { name="ShortRead"; version="1.54.0"; sha256="0303198b4v2wjah9kc829kn01030996l6di4jpf8q5ccd212rjhq"; depends=[Biobase BiocGenerics BiocParallel Biostrings GenomeInfoDb GenomicAlignments GenomicRanges hwriter IRanges lattice latticeExtra Rhtslib Rsamtools S4Vectors XVector zlibbioc]; };
 938   SigCheck = derive2 { name="SigCheck"; version="2.28.0"; sha256="0xagj5zfm25d8ld497pvbx23pwbds1pkg68zlk908zwhy7g26512"; depends=[Biobase BiocParallel e1071 MLInterfaces survival]; };
 939   SigFuge = derive2 { name="SigFuge"; version="1.34.0"; sha256="1kqpkl6b742z9jldnxkji7ng4w9yaj76s86njkw94qyzrvkn6xcg"; depends=[GenomicRanges ggplot2 matlab reshape sigclust]; };
 940   SigsPack = derive2 { name="SigsPack"; version="1.10.0"; sha256="1c3xnk90gy60jzjgydg0vr1xmlcad4dkk45skyh42abzqxlwj5yd"; depends=[Biobase Biostrings BSgenome GenomeInfoDb GenomicRanges quadprog rtracklayer SummarizedExperiment VariantAnnotation]; };
 941   SimBindProfiles = derive2 { name="SimBindProfiles"; version="1.34.0"; sha256="1ndim53fhx0naj1r5zwq4d655nbdvclfi40m3fqg891hzz370sd6"; depends=[Biobase limma mclust Ringo]; };
 942   SimFFPE = derive2 { name="SimFFPE"; version="1.8.0"; sha256="0i2ah49bajhjf0yjjhm84vpc8brs8y3c016l4sbwhpb2nhcqgvgj"; depends=[Biostrings doParallel dplyr foreach GenomicRanges IRanges Rsamtools truncnorm]; };
 943   SingleCellExperiment = derive2 { name="SingleCellExperiment"; version="1.18.1"; sha256="13iq480xbgqriyjrlknamym1wspdh54i9jahgvk726ksfzf19vx0"; depends=[BiocGenerics DelayedArray GenomicRanges S4Vectors SummarizedExperiment]; };
 944   SingleCellSignalR = derive2 { name="SingleCellSignalR"; version="1.8.0"; sha256="0c0fsr1b0mc5a7qfa7cjipx50fscb120747c9xjp5n55jv5hwd9c"; depends=[BiocManager circlize data_table edgeR foreach gplots igraph limma multtest pheatmap Rtsne scran SIMLR stringr]; };
 945   SingleMoleculeFootprinting = derive2 { name="SingleMoleculeFootprinting"; version="1.4.0"; sha256="0kayi1cahn57ysdhykk4h3a93ajnr41p7xbf1v04mvbz9gq9piqf"; depends=[BiocGenerics Biostrings BSgenome data_table GenomeInfoDb GenomicRanges IRanges plyr QuasR RColorBrewer]; };
 946   SingleR = derive2 { name="SingleR"; version="1.10.0"; sha256="0qbyc6ygw2xv3li9187i3axsw6ihwpa7pkvxvy9cagv7xck45c5y"; depends=[beachmat BiocNeighbors BiocParallel BiocSingular DelayedArray DelayedMatrixStats Matrix Rcpp S4Vectors SummarizedExperiment]; };
 947   SomaticSignatures = derive2 { name="SomaticSignatures"; version="2.32.0"; sha256="1ydnp54laznzpi08s403kxhnr5nqhvm3iilaxlcdlz0ngxhm6vx6"; depends=[Biobase Biostrings GenomeInfoDb GenomicRanges ggbio ggplot2 IRanges NMF pcaMethods proxy reshape2 S4Vectors VariantAnnotation]; };
 948   SpacePAC = derive2 { name="SpacePAC"; version="1.34.0"; sha256="0i0bl55cbrhj9zvlvh3wbxgjaq5g1xvxdd6gpnj0barr5p8bx7x2"; depends=[iPAC]; };
 949   Spaniel = derive2 { name="Spaniel"; version="1.10.0"; sha256="19280ardr91mk0l60nxprq9405drwmnc4jlbrzx1lz6951k07zj0"; depends=[dplyr DropletUtils ggplot2 igraph jpeg jsonlite magrittr png S4Vectors scater scran Seurat shiny SingleCellExperiment SummarizedExperiment]; };
 950   SparseSignatures = derive2 { name="SparseSignatures"; version="2.6.0"; sha256="1ks4279slgyn2fnwmafgcmmhq69fx6jpvafjahpvnvh6jlf9dxy9"; depends=[Biostrings BSgenome data_table GenomeInfoDb GenomicRanges ggplot2 gridExtra IRanges NMF nnlasso nnls reshape2]; };
 951   SpatialCPie = derive2 { name="SpatialCPie"; version="1.12.0"; sha256="06axh7wnf19hs7y6skik2yff3xyd06y4x9jrx1996hjliyhdv88v"; depends=[colorspace data_table digest dplyr ggforce ggiraph ggplot2 ggrepel igraph lpSolve purrr readr rlang shiny shinycssloaders shinyjs shinyWidgets SummarizedExperiment tibble tidyr tidyselect zeallot]; };
 952   SpatialDecon = derive2 { name="SpatialDecon"; version="1.6.0"; sha256="12fyzsrgz76wndxk59p8aknxvj62g4b9k21hla4m2zj1cav46lhc"; depends=[Biobase GeomxTools Matrix repmis SeuratObject]; };
 953   SpatialExperiment = derive2 { name="SpatialExperiment"; version="1.6.1"; sha256="1ddsdh6c1hwyaqf664ih0midfgc6crh17g2kx2glnzl29vhidr9i"; depends=[BiocFileCache BiocGenerics DropletUtils magick rjson S4Vectors SingleCellExperiment SummarizedExperiment]; };
 954   SpeCond = derive2 { name="SpeCond"; version="1.50.0"; sha256="051p6npzjpwagd0bnzpbdjcmgkasr8d74a42ppmlc9hsfg8pzqcw"; depends=[Biobase fields hwriter mclust RColorBrewer]; };
 955   Spectra = derive2 { name="Spectra"; version="1.6.0"; sha256="0kzz7par5zwk4qypicmz39d6bc4aqmflzzxfrpng2y3id7f15jks"; depends=[BiocGenerics BiocParallel fs IRanges MsCoreUtils ProtGenerics S4Vectors]; };
 956   SpectralTAD = derive2 { name="SpectralTAD"; version="1.12.0"; sha256="0svv4mp6qk2k3clz8qdigzhawh4cglzwrb8frh5c6mgrgdbf53g5"; depends=[BiocParallel cluster dplyr GenomicRanges HiCcompare magrittr Matrix PRIMME]; };
 957   SpidermiR = derive2 { name="SpidermiR"; version="1.26.1"; sha256="0zwnl1pyclg994l8ikp13zlzh13daph113d8brg37cjmrvag4abm"; depends=[AnnotationDbi gdata httr igraph miRNAtap miRNAtap_db org_Hs_eg_db]; };
 958   SplicingFactory = derive2 { name="SplicingFactory"; version="1.4.0"; sha256="11kkr4c2ilwbr2h80aqiphxihwzs4sr23hq3q6w22w3wqqp7w24k"; depends=[SummarizedExperiment]; };
 959   SplicingGraphs = derive2 { name="SplicingGraphs"; version="1.36.0"; sha256="1c8m8ab5jrwa8fryrdww4r41svkv864l2pr1hy1kil3njyaam0ml"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph igraph IRanges Rgraphviz Rsamtools S4Vectors]; };
 960   StarBioTrek = derive2 { name="StarBioTrek"; version="1.22.0"; sha256="10wf96rn0d1srwkp980www7w5jjxzrq1li8d7n7069z3ja01p4ca"; depends=[AnnotationDbi e1071 ggplot2 graphite igraph MLmetrics reshape2 ROCR SpidermiR]; };
 961   Streamer = derive2 { name="Streamer"; version="1.42.0"; sha256="0v2cgi38blr8ydsnkyf50raqh7kcjzz0bpw27sl4ayprxbqg8nda"; depends=[BiocGenerics graph RBGL]; };
 962   Structstrings = derive2 { name="Structstrings"; version="1.12.0"; sha256="175g2wpsvmh8vj3pqv55mczhfzxip64rilynprywll9njk72ayb0"; depends=[BiocGenerics Biostrings crayon IRanges S4Vectors stringi stringr XVector]; };
 963   StructuralVariantAnnotation = derive2 { name="StructuralVariantAnnotation"; version="1.12.0"; sha256="0f3x74ic3blg8nm5xlv79k0n8j3fpl98mmhfanqfzmdl0g3j6wx6"; depends=[assertthat BiocGenerics Biostrings dplyr GenomeInfoDb GenomicFeatures GenomicRanges IRanges rlang rtracklayer S4Vectors stringr SummarizedExperiment VariantAnnotation]; };
 964   SubCellBarCode = derive2 { name="SubCellBarCode"; version="1.12.0"; sha256="1gj49s99sfcnvpd04h9y4mil1x4d4s33jadljfpwwavhqnbqbp0w"; depends=[AnnotationDbi caret e1071 ggplot2 ggrepel gridExtra networkD3 org_Hs_eg_db Rtsne scatterplot3d]; };
 965   SummarizedBenchmark = derive2 { name="SummarizedBenchmark"; version="2.14.0"; sha256="04w3mb5f3wj8n82fzhfvhaq986k1nfji8v4w7pnrbprizq6a5clf"; depends=[BiocGenerics BiocParallel crayon digest dplyr ggplot2 mclust rlang S4Vectors sessioninfo stringr SummarizedExperiment tibble tidyr UpSetR]; };
 966   SummarizedExperiment = derive2 { name="SummarizedExperiment"; version="1.26.1"; sha256="02vlqzmslyijs09jl0gdjxqjjnnl4yqbqqqlb4vb7nr0fspmyz39"; depends=[Biobase BiocGenerics DelayedArray GenomeInfoDb GenomicRanges IRanges Matrix MatrixGenerics S4Vectors]; };
 967   Summix = derive2 { name="Summix"; version="2.2.0"; sha256="08f7dr3ni2dkd55m7rgfc9s6xxn1na9xp9vpnmr3rcimp9w6lhwb"; depends=[nloptr]; };
 968   Sushi = derive2 { name="Sushi"; version="1.34.0"; sha256="0adswrbzd93rhy3q56ypwkrk6155vd4zxapvznswyjlxp8ha813q"; depends=[biomaRt zoo]; };
 969   SwathXtend = derive2 { name="SwathXtend"; version="2.18.0"; sha256="02lkh200pvzps2vp0i4fjm96zi1fy8x21kvd0sa599yks7vimzp4"; depends=[e1071 lattice openxlsx VennDiagram]; };
 970   SynExtend = derive2 { name="SynExtend"; version="1.8.0"; sha256="0z30izc2wnbbhv19xf5dnnls8j42v38771yv78im75li88zxl91m"; depends=[Biostrings DECIPHER IRanges S4Vectors]; };
 971   SynMut = derive2 { name="SynMut"; version="1.12.1"; sha256="0smrqh2gk1cy8aqqrfx7whwdcsn5s57w6crkah2v50p1q9xbvgjm"; depends=[BiocGenerics Biostrings seqinr stringr]; };
 972   TADCompare = derive2 { name="TADCompare"; version="1.6.0"; sha256="0ramji5pn5w7ch83slflsw1wxhy451zw99rkhzb4slvgqi8v7bk8"; depends=[cluster cowplot dplyr ggplot2 ggpubr HiCcompare magrittr Matrix PRIMME RColorBrewer reshape2 tidyr]; };
 973   TAPseq = derive2 { name="TAPseq"; version="1.8.0"; sha256="0ls9l12fp04j2asr25cbz6xs38y3znhgcphfglbc13li3aa77gx0"; depends=[BiocGenerics BiocParallel Biostrings BSgenome dplyr GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges S4Vectors tidyr]; };
 974   TBSignatureProfiler = derive2 { name="TBSignatureProfiler"; version="1.8.0"; sha256="1npcdr3grm6qq4lqan6z9czkiwyz74pi741jwahzr0q93ah25kks"; depends=[ASSIGN BiocGenerics BiocParallel ComplexHeatmap DESeq2 DT edgeR gdata ggplot2 GSVA magrittr RColorBrewer reshape2 rlang ROCit S4Vectors singscore SummarizedExperiment]; };
 975   TCC = derive2 { name="TCC"; version="1.36.0"; sha256="077gj5f1iwb3xwy29p5q5fr3459nq9swybn7504dyxb93259qxzi"; depends=[baySeq DESeq2 edgeR ROC]; };
 976   TCGAbiolinks = derive2 { name="TCGAbiolinks"; version="2.24.3"; sha256="0visvfhzaf0p1rb5vjkmw1c91zfxpks8nl9nbl9xlnpm8lkmmkms"; depends=[biomaRt data_table downloader dplyr GenomicRanges ggplot2 httr IRanges jsonlite knitr plyr purrr R_utils readr rvest S4Vectors stringr SummarizedExperiment TCGAbiolinksGUI_data tibble tidyr XML xml2]; };
 977   TCGAbiolinksGUI = derive2 { name="TCGAbiolinksGUI"; version="1.22.0"; sha256="1rav6nmbq8sn60x6cdc5zmvwwpiyfjc6n8hlzyjsg2yy3h3ij0qp"; depends=[caret clusterProfiler colourpicker data_table downloader DT ELMER ggplot2 ggrepel maftools pathview plotly readr sesame shiny shinyBS shinydashboard shinyFiles shinyjs stringr SummarizedExperiment TCGAbiolinks TCGAbiolinksGUI_data]; };
 978   TCGAutils = derive2 { name="TCGAutils"; version="1.16.1"; sha256="0lsnqxv0zbx4b3dfm3x5bf7i88y9wpq39faff84lrqk4nz9v4svn"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicDataCommons GenomicFeatures GenomicRanges IRanges MultiAssayExperiment RaggedExperiment rvest S4Vectors stringr SummarizedExperiment xml2]; };
 979   TCseq = derive2 { name="TCseq"; version="1.20.0"; sha256="0wqkbvg41xbkfc0xs44ckpzagwyfmqrdr69fj7am51khzv7gznrk"; depends=[BiocGenerics cluster e1071 edgeR GenomicAlignments GenomicRanges ggplot2 IRanges locfit reshape2 Rsamtools SummarizedExperiment]; };
 980   TDARACNE = derive2 { name="TDARACNE"; version="1.46.0"; sha256="1ryrnaaq15sgji2j4js5vgsr2j7dl4dd0shmz7qayyq0k7ai2yaq"; depends=[Biobase Rgraphviz]; };
 981   TEKRABber = derive2 { name="TEKRABber"; version="1.0.1"; sha256="0pilrjrvd43jr8h6s2zcc6rk0p4q2l3bhz6lm344a7y5wyvccly6"; depends=[apeglm biomaRt DESeq2 Rcpp SCBN SummarizedExperiment]; };
 982   TEQC = derive2 { name="TEQC"; version="4.18.0"; sha256="1n0ifh86z4635x8hk4yv8n1ay35725i7y0n8j2gdp7si5y3nsfnv"; depends=[Biobase BiocGenerics hwriter IRanges Rsamtools]; };
 983   TFARM = derive2 { name="TFARM"; version="1.18.0"; sha256="0rmw7r6k8mb5672aap26liqblrmasxvccxd4fjw2sdb449wbd9dl"; depends=[arules fields GenomicRanges gplots stringr]; };
 984   TFBSTools = derive2 { name="TFBSTools"; version="1.34.0"; sha256="0l6j1r2cx7jfd39qzbyynk4jvzd81ys6yypzxjc97js4kkyrx29w"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome caTools CNEr DBI DirichletMultinomial GenomeInfoDb GenomicRanges gtools IRanges RSQLite rtracklayer S4Vectors seqLogo TFMPvalue XML XVector]; };
 985   TFEA_ChIP = derive2 { name="TFEA.ChIP"; version="1.16.0"; sha256="0ckc4azfd9li5qd07ylprmds8qyq78bf8blbqgrkrgig9jpzn92s"; depends=[biomaRt dplyr GenomicFeatures GenomicRanges IRanges org_Hs_eg_db R_utils]; };
 986   TFHAZ = derive2 { name="TFHAZ"; version="1.18.4"; sha256="07vfy39fa0nx685wj248q19h0733p773vhad893ds4ikbylmy6mg"; depends=[GenomicRanges IRanges ORFik S4Vectors]; };
 987   TFutils = derive2 { name="TFutils"; version="1.16.0"; sha256="1awzxj668ldh44fl0izvbm73cgm60rw93rfqfbhsflsx984rhzj9"; depends=[AnnotationDbi BiocFileCache dplyr DT GSEABase httr magrittr miniUI org_Hs_eg_db readxl rjson Rsamtools shiny]; };
 988   TIN = derive2 { name="TIN"; version="1.28.0"; sha256="1kgs45dif5fdmxlzhd6971mlhg0y1a41srnrx7irm4s4wckrpg4n"; depends=[aroma_affymetrix data_table impute squash stringr WGCNA]; };
 989   TMixClust = derive2 { name="TMixClust"; version="1.18.0"; sha256="11ypr523hzbrynr1l68l7grn32499bl3j5wb7ic5i265r2kjcz4w"; depends=[Biobase BiocParallel cluster flexclust gss mvtnorm SPEM zoo]; };
 990   TNBC_CMS = derive2 { name="TNBC.CMS"; version="1.12.0"; sha256="12w43p3fpcn98h3p9brkc9fdsn0wn73bzyrz63gm43q1jw0zpizd"; depends=[e1071 forestplot GGally ggplot2 ggpubr GSVA pheatmap pracma quadprog R_utils RColorBrewer SummarizedExperiment survival]; };
 991   TOAST = derive2 { name="TOAST"; version="1.10.1"; sha256="08pqriz9x32ixkjajh2wlh1cb7y8xmxna7by2qm5pjrrzblq96bh"; depends=[corpcor doParallel EpiDISH GGally ggplot2 limma nnls quadprog SummarizedExperiment tidyr]; };
 992   TPP = derive2 { name="TPP"; version="3.24.0"; sha256="0w0gwhvc2mra0jd81pskhqsdayikz3fpbcx0sf45iac918dd2m4l"; depends=[Biobase biobroom broom data_table doParallel dplyr foreach futile_logger ggplot2 gridExtra knitr limma magrittr MASS mefa nls2 openxlsx plyr purrr RColorBrewer RCurl reshape2 rmarkdown stringr tibble tidyr VennDiagram VGAM]; };
 993   TPP2D = derive2 { name="TPP2D"; version="1.12.0"; sha256="1567r1v92skhlvjysh5v32h6c50grm8qm7wbwdvr52pjqc7kvfb4"; depends=[BiocParallel doParallel dplyr foreach ggplot2 limma MASS openxlsx RCurl stringr tidyr]; };
 994   TREG = derive2 { name="TREG"; version="1.0.1"; sha256="1d0ynkj1iiirigrzbnfclzcvvz1yx8c0ykqhz5vg8bhaw1h0ry3j"; depends=[Matrix purrr rafalib SummarizedExperiment]; };
 995   TRESS = derive2 { name="TRESS"; version="1.2.0"; sha256="17g37g8kbis42iv980002py225cxy0gvjfnjda760am387gb9hqm"; depends=[AnnotationDbi GenomicFeatures GenomicRanges IRanges Matrix matrixStats Rsamtools rtracklayer S4Vectors]; };
 996   TRONCO = derive2 { name="TRONCO"; version="2.28.0"; sha256="1ynf41bpc0v51sv6mig84n778kpfq0l9g50xff1bwz7zl1iab4al"; depends=[bnlearn circlize doParallel foreach gridExtra gtable gtools igraph iterators R_matlab RColorBrewer Rgraphviz scales xtable]; };
 997   TSCAN = derive2 { name="TSCAN"; version="1.34.0"; sha256="0a8f38jbb2lhqavqgbvm0d9xfy1cgjq4l7vs5h6kr45ij09wr6pm"; depends=[combinat DelayedArray fastICA ggplot2 gplots igraph Matrix mclust mgcv plyr S4Vectors shiny SingleCellExperiment SummarizedExperiment TrajectoryUtils]; };
 998   TTMap = derive2 { name="TTMap"; version="1.18.0"; sha256="01kj5snbf435d073xdh0pya2rmd1h3cxsagn0mqq5vvf46246258"; depends=[Biobase colorRamps rgl SummarizedExperiment]; };
 999   TVTB = derive2 { name="TVTB"; version="1.22.0"; sha256="006xyify2vy8jblzwi1hayn4yvvqpyz9is2z1z0lrcy7krhdmx8s"; depends=[AnnotationFilter BiocGenerics BiocParallel Biostrings ensembldb ensemblVEP GenomeInfoDb GenomicRanges GGally ggplot2 Gviz IRanges limma reshape2 Rsamtools S4Vectors SummarizedExperiment VariantAnnotation]; };
1000   TarSeqQC = derive2 { name="TarSeqQC"; version="1.25.1"; sha256="0g6zpbyn7ysvlply9sqbw3pw504nk5g342vv5n59czrr9nyymics"; depends=[BiocGenerics BiocParallel Biostrings cowplot GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 Hmisc IRanges openxlsx plyr reshape2 Rsamtools S4Vectors]; };
1001   TargetDecoy = derive2 { name="TargetDecoy"; version="1.2.0"; sha256="15z2nzaikgbp0y56v0cifbk2w1c1akgqb5d5zgbcbpih0kawhfjd"; depends=[ggplot2 ggpubr mzID mzR]; };
1002   TargetScore = derive2 { name="TargetScore"; version="1.34.0"; sha256="1yrcjdv5g3nx8m95wf1nilrmi1sppii4i4da19sm5ys4idl60213"; depends=[Matrix pracma]; };
1003   TargetSearch = derive2 { name="TargetSearch"; version="1.52.0"; sha256="0pgj9h5sfwgx1rrlxd9zrvmbj0z26jxmhdx6f2khbgk7i2c1hxpd"; depends=[assertthat ncdf4]; };
1004   TileDBArray = derive2 { name="TileDBArray"; version="1.6.0"; sha256="0n600170qabrswjch922skfsbwr7hnyxzmg015bxm5kfmwhab9pd"; depends=[DelayedArray Rcpp S4Vectors tiledb]; };
1005   TimeSeriesExperiment = derive2 { name="TimeSeriesExperiment"; version="1.13.0"; sha256="0bdpxxr739qdg92qabfx122k9f43vw2hyxp4yxqlbp37vzgcdf2c"; depends=[DESeq2 dplyr dynamicTreeCut edgeR ggplot2 Hmisc limma magrittr proxy S4Vectors SummarizedExperiment tibble tidyr vegan viridis]; };
1006   TimiRGeN = derive2 { name="TimiRGeN"; version="1.6.0"; sha256="1x8s0k938vfdadf6b33ha7ffvd2sn16scxii0wlzzm9s4v65vsvy"; depends=[biomaRt clusterProfiler dplyr FreqProf ggdendro gghighlight ggplot2 gplots gtools igraph Mfuzz MultiAssayExperiment RCy3 readxl reshape2 rWikiPathways scales stringr tidyr]; };
1007   TissueEnrich = derive2 { name="TissueEnrich"; version="1.16.0"; sha256="1l8qza4dmacp2rgx0z9nmya6jhidymx14wnz0vza0bm9409kaw41"; depends=[dplyr ensurer ggplot2 GSEABase SummarizedExperiment tidyr]; };
1008   TitanCNA = derive2 { name="TitanCNA"; version="1.34.0"; sha256="14mxskynm6rjh8c7nzkp06c7a3a5rlcj88s9c6brzgx7gm3k7j3x"; depends=[BiocGenerics data_table dplyr foreach GenomeInfoDb GenomicRanges IRanges VariantAnnotation]; };
1009   TnT = derive2 { name="TnT"; version="1.18.0"; sha256="01c4lhy9k2wiy7m7685qy4bj5q9bys7xqxfy9x3kpcn7by3dix83"; depends=[Biobase data_table GenomeInfoDb GenomicRanges htmlwidgets IRanges jsonlite knitr S4Vectors]; };
1010   ToxicoGx = derive2 { name="ToxicoGx"; version="2.0.0"; sha256="0d331md9cq2h44zq8wvj2167994i097drfgljhwj1nnfsx9agqn1"; depends=[assertthat Biobase BiocGenerics BiocParallel caTools CoreGx data_table downloader dplyr ggplot2 jsonlite limma magrittr reshape2 S4Vectors scales SummarizedExperiment tibble tidyr]; };
1011   TraRe = derive2 { name="TraRe"; version="1.4.0"; sha256="1vrafzf8qk6nnav1m4ym26n8f0nfbsxqnmymv9a7k8yfxry3jnn8"; depends=[BiocParallel dqrng ggplot2 glmnet gplots gtools hash igraph matrixStats pvclust R_utils SummarizedExperiment]; };
1012   TrajectoryGeometry = derive2 { name="TrajectoryGeometry"; version="1.4.0"; sha256="13dxsk2dq5bsf9bwq4618kr6wsbmvzqnqh8i8zqrx4i818wd571s"; depends=[ggplot2 pracma rgl]; };
1013   TrajectoryUtils = derive2 { name="TrajectoryUtils"; version="1.4.0"; sha256="07hcr3zplxlzlwc13wh9006m5kaqm57cm1b2x74bpp857f2q93dj"; depends=[igraph Matrix S4Vectors SingleCellExperiment SummarizedExperiment]; };
1014   TransView = derive2 { name="TransView"; version="1.40.0"; sha256="1k3fs0wxh2m2mp7i6hqnpgf60jikgjn7cdv2mmnz77ignp37xr4f"; depends=[BiocGenerics GenomicRanges gplots IRanges Rhtslib S4Vectors zlibbioc]; };
1015   Travel = derive2 { name="Travel"; version="1.4.0"; sha256="1k3wv2a38cfmyxci8pi8i6vqj0q3prqdh1hid2sa40slapk6h30z"; depends=[Rcpp]; };
1016   TreeAndLeaf = derive2 { name="TreeAndLeaf"; version="1.8.0"; sha256="0wxgwcf2g2siz3kv19an1qv45xap8cdi4gblc9kssg0pjbxyhqnh"; depends=[ape igraph RedeR]; };
1017   TreeSummarizedExperiment = derive2 { name="TreeSummarizedExperiment"; version="2.4.0"; sha256="0bqqnx89bcknlrpxm5n3wbmfw99gfrpaxi5n6fv4pmqyrd0rwcx7"; depends=[ape BiocGenerics BiocParallel Biostrings dplyr IRanges rlang S4Vectors SingleCellExperiment SummarizedExperiment treeio]; };
1018   Trendy = derive2 { name="Trendy"; version="1.18.0"; sha256="06rjim93kqrf7l2m16vgi567fi9cdblgbf9khnmmbg73kaa346zz"; depends=[BiocParallel DT gplots magrittr S4Vectors segmented shiny shinyFiles SummarizedExperiment]; };
1019   TurboNorm = derive2 { name="TurboNorm"; version="1.44.0"; sha256="00rggbdsk7xprkry8bi17mf143kqgw63cb315d9dc1qrc9vyz568"; depends=[affy convert lattice limma marray]; };
1020   TypeInfo = derive2 { name="TypeInfo"; version="1.62.0"; sha256="17cj4yd6lpckidzh5f3jb3vbwyimlnmsb3v5as4f91h2vnymwpax"; depends=[]; };
1021   UCell = derive2 { name="UCell"; version="2.0.1"; sha256="08wh5fch4sb1ijjz8rr8jkz3vvskb7k7948fd2b7bb104qmyhv41"; depends=[BiocParallel data_table Matrix SingleCellExperiment SummarizedExperiment]; };
1022   UMI4Cats = derive2 { name="UMI4Cats"; version="1.6.0"; sha256="0216qwriwjm0m7rzq8qjrvhnmn0fyqsv13cx24is53wqkqbqnavm"; depends=[annotate BiocFileCache BiocGenerics Biostrings BSgenome cowplot DESeq2 dplyr fda GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges magick magrittr org_Hs_eg_db R_utils rappdirs Rbowtie2 RColorBrewer regioneR reshape2 rlang Rsamtools S4Vectors scales ShortRead stringr SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene zoo]; };
1023   UNDO = derive2 { name="UNDO"; version="1.38.0"; sha256="0fasad2y0cnrdlfarqxlmgn30hjfqksddnvq5yia3ps50wzj7xyr"; depends=[Biobase BiocGenerics boot MASS nnls]; };
1024   Ularcirc = derive2 { name="Ularcirc"; version="1.14.0"; sha256="0pqinw35vd94gk78i45rdyl4gyp6q8dmzc5kz72mcfg702wh7g8h"; depends=[AnnotationDbi AnnotationHub BiocGenerics Biostrings BSgenome data_table DT GenomeInfoDb GenomeInfoDbData GenomicAlignments GenomicFeatures GenomicRanges ggplot2 ggrepel gsubfn mirbase_db moments Organism_dplyr plotgardener R_utils S4Vectors shiny shinydashboard shinyFiles shinyjs yaml]; };
1025   UniProt_ws = derive2 { name="UniProt.ws"; version="2.36.5"; sha256="1q5wdfww4pdsqyxjvv2dw88b3kwddvj94p17yxbnnrs4ra6jcfdn"; depends=[AnnotationDbi BiocFileCache BiocGenerics cellxgenedp httpcache httr jsonlite progress RSQLite]; };
1026   Uniquorn = derive2 { name="Uniquorn"; version="2.16.0"; sha256="0hf2gs0aw0jw9qw1bqhsvxvw5grppbi3wxbfiynkbvza11aglifw"; depends=[doParallel foreach GenomicRanges IRanges R_utils stringr VariantAnnotation WriteXLS]; };
1027   VAExprs = derive2 { name="VAExprs"; version="1.2.1"; sha256="19jhjayyaga1lyswhbibgva32mdmfvkdidcvxgl22728c6ppkg61"; depends=[CatEncoders DeepPINCS DiagrammeR keras mclust purrr scater SingleCellExperiment SummarizedExperiment tensorflow]; };
1028   VCFArray = derive2 { name="VCFArray"; version="1.12.0"; sha256="17zgwv8nc192jyzlym09zyqppbg6zlid60xzh921mvp41sprf2j9"; depends=[BiocGenerics DelayedArray GenomicFiles GenomicRanges Rsamtools S4Vectors VariantAnnotation]; };
1029   VERSO = derive2 { name="VERSO"; version="1.6.0"; sha256="13s91s03l15sha9sqcwazhhzph7s7ivbijlq1cz6c04x54bsdncn"; depends=[ape Rfast]; };
1030   VaSP = derive2 { name="VaSP"; version="1.8.0"; sha256="10fvdlxj4flv4zssaprhzg76l0jlin015pha7dmvfmjda4xm2zrl"; depends=[ballgown cluster GenomeInfoDb GenomicAlignments GenomicRanges IRanges matrixStats Rsamtools S4Vectors]; };
1031   VanillaICE = derive2 { name="VanillaICE"; version="1.58.0"; sha256="1m3fi8snnf5rklhnwj2wndk86ry27anpa9pkk43v35qx5cvm1q9p"; depends=[Biobase BiocGenerics BSgenome_Hsapiens_UCSC_hg18 crlmm data_table foreach GenomeInfoDb GenomicRanges IRanges lattice MatrixGenerics matrixStats oligoClasses S4Vectors SummarizedExperiment]; };
1032   VarCon = derive2 { name="VarCon"; version="1.4.0"; sha256="0l0vgs2hmykkxp2s14pzwjzg3xbhcj5md3hfz85n0cn4j8qgf4hz"; depends=[Biostrings BSgenome GenomicRanges ggplot2 IRanges shiny shinycssloaders shinyFiles]; };
1033   VariantAnnotation = derive2 { name="VariantAnnotation"; version="1.42.1"; sha256="12d5hkx6pby6l2asyg4jp4jb2x17ybwhqd55rl64h37mwcndbdg1"; depends=[AnnotationDbi Biobase BiocGenerics Biostrings BSgenome DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges MatrixGenerics Rhtslib Rsamtools rtracklayer S4Vectors SummarizedExperiment XVector zlibbioc]; };
1034   VariantExperiment = derive2 { name="VariantExperiment"; version="1.10.0"; sha256="17xrlmr25iilrnmsicf42qc7alh8qfqg6v7sd5mpw4lzwxim1mqv"; depends=[Biostrings DelayedArray DelayedDataFrame GDSArray gdsfmt GenomicRanges IRanges S4Vectors SeqArray SeqVarTools SNPRelate SummarizedExperiment]; };
1035   VariantFiltering = derive2 { name="VariantFiltering"; version="1.32.0"; sha256="1bjqn8qik221x0bqvgd99p87v45iihwp6cxckh4ks964pd0c1xk8"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings BSgenome DT GenomeInfoDb GenomicFeatures GenomicRanges GenomicScores graph Gviz IRanges RBGL Rsamtools S4Vectors shiny shinyjs shinythemes shinyTree SummarizedExperiment VariantAnnotation XVector]; };
1036   VariantTools = derive2 { name="VariantTools"; version="1.38.0"; sha256="18nxcamfgnw4n2ab0czxglw0sqc9wzdqzpjv43lcyyal23lzzsix"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicFeatures GenomicRanges IRanges Matrix Rsamtools rtracklayer S4Vectors VariantAnnotation]; };
1037   VegaMC = derive2 { name="VegaMC"; version="3.34.0"; sha256="172sa4zy4azyq50gxz9p4w23ac2xczwbq3nyp95q9zw9q6k7zcsk"; depends=[Biobase biomaRt]; };
1038   VennDetail = derive2 { name="VennDetail"; version="1.12.0"; sha256="0z98xhc636c291n76x9zxfcplgd3gc83fdvfbm8hjsmbp0fwca83"; depends=[dplyr futile_logger ggplot2 magrittr purrr tibble UpSetR VennDiagram]; };
1039   ViSEAGO = derive2 { name="ViSEAGO"; version="1.10.0"; sha256="0s5x81cd7az9bx74rpfqy1lcf4p494mcj5bgvb0ky7fgnfcn6b6d"; depends=[AnnotationDbi AnnotationForge biomaRt data_table dendextend DiagrammeR DT dynamicTreeCut fgsea ggplot2 GO_db GOSemSim heatmaply htmlwidgets igraph plotly processx R_utils RColorBrewer scales topGO UpSetR]; };
1040   VplotR = derive2 { name="VplotR"; version="1.6.0"; sha256="0k2gg4kjkhlha95yxknp16sj6idz7jsqimna7grcfabclqilypms"; depends=[cowplot GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges magrittr RColorBrewer reshape2 Rsamtools S4Vectors zoo]; };
1041   Wrench = derive2 { name="Wrench"; version="1.14.0"; sha256="1zx65s4m71wj85s2sq8ip54pq12r4sxfv8b2rxc41gfc5aj0zzca"; depends=[limma locfit matrixStats]; };
1042   XDE = derive2 { name="XDE"; version="2.42.0"; sha256="02nvrkj2pjc8jv57zilmx39bn9vxpj95f68gvf3sp6g3gffblv0d"; depends=[Biobase BiocGenerics genefilter GeneMeta gtools mvtnorm RColorBrewer siggenes]; };
1043   XINA = derive2 { name="XINA"; version="1.14.0"; sha256="03gf7mqpnwx12kny9fsaskgrw83b0wi2cf1j4dbq46pfxjx34v1g"; depends=[alluvial ggplot2 gridExtra igraph mclust plyr STRINGdb]; };
1044   XNAString = derive2 { name="XNAString"; version="1.4.0"; sha256="07y0n21i83izlnavwbxlhmrsa074k73d9p2cl19bj704sylw0g1j"; depends=[Biostrings BSgenome data_table formattable future_apply GenomicRanges IRanges Rcpp S4Vectors stringi stringr]; };
1045   XVector = derive2 { name="XVector"; version="0.36.0"; sha256="1f3sbqy279gb9k13l73j00ixywa1havlqy81zx766r1xkz15nvhk"; depends=[BiocGenerics IRanges S4Vectors zlibbioc]; };
1046   Xeva = derive2 { name="Xeva"; version="1.12.0"; sha256="1ajgaf00bik6dfk3zj0m211g38lxqdg99r99rz1n21nms6a4qzia"; depends=[BBmisc Biobase ComplexHeatmap doParallel downloader ggplot2 nlme PharmacoGx Rmisc scales]; };
1047   YAPSA = derive2 { name="YAPSA"; version="1.22.0"; sha256="1klqfif4sadkxw7agywk2ncvcdqsnfb1d6adnacdfdasr8abvhid"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 circlize ComplexHeatmap corrplot dendextend doParallel dplyr GenomeInfoDb GenomicRanges GetoptLong ggbeeswarm ggplot2 gridExtra gtrellis KEGGREST limSolve magrittr PMCMRplus pracma reshape2 SomaticSignatures VariantAnnotation]; };
1048   a4 = derive2 { name="a4"; version="1.44.0"; sha256="1zs8fs6mdd7fhsmx4k824mid0jk400cm6dwfhl8z5lg85y8y2n0r"; depends=[a4Base a4Classif a4Core a4Preproc a4Reporting]; };
1049   a4Base = derive2 { name="a4Base"; version="1.44.0"; sha256="15zqirz16gpks9f5d3d76h85b936za2jih74vfr55l5arqrrvvsn"; depends=[a4Core a4Preproc annaffy Biobase genefilter glmnet gplots limma mpm multtest]; };
1050   a4Classif = derive2 { name="a4Classif"; version="1.44.0"; sha256="1v61vgpqrf7bhk44n2gkxb8dm5d0rr8c9rd6fdcjs50nhij0lbiw"; depends=[a4Core a4Preproc Biobase glmnet pamr ROCR varSelRF]; };
1051   a4Core = derive2 { name="a4Core"; version="1.44.0"; sha256="1ky1lphq6bqxj6h12pg06cvs451fziqam8gd56wmpk6r5pbg4390"; depends=[Biobase glmnet]; };
1052   a4Preproc = derive2 { name="a4Preproc"; version="1.44.0"; sha256="098yzy7x5536bj76iavismdsdn7x6x07aw0j3knj6i9www9y8yz9"; depends=[Biobase BiocGenerics]; };
1053   a4Reporting = derive2 { name="a4Reporting"; version="1.44.0"; sha256="03sypayh187gqc6hykkqr1g0vb3zxc2c3xyp00jfbn12b35acnb0"; depends=[xtable]; };
1054   aCGH = derive2 { name="aCGH"; version="1.74.0"; sha256="00ni0kwy68v33ggfi8g5vffirhmbhaxg4l54hcqhx75m535z1x7d"; depends=[Biobase cluster multtest survival]; };
1055   abseqR = derive2 { name="abseqR"; version="1.14.0"; sha256="0jh3rj6ag07vpw6fymqm6m4jkrm9mgf50zkjncahxdf52mna8a9b"; depends=[BiocParallel BiocStyle circlize flexdashboard ggcorrplot ggdendro ggplot2 gridExtra knitr plotly plyr png RColorBrewer reshape2 rmarkdown stringr vegan VennDiagram]; };
1056   acde = derive2 { name="acde"; version="1.26.0"; sha256="0lgq546y4qklfzbc6fjr3d656hn76p6dn4694qfiafql2nlsjbj2"; depends=[boot]; };
1057   adSplit = derive2 { name="adSplit"; version="1.66.0"; sha256="1wl2gd0b7krf485clw67cxayp0g9argklkzn8nw1vrkil0vvr4jm"; depends=[AnnotationDbi Biobase cluster GO_db KEGGREST multtest]; };
1058   adductomicsR = derive2 { name="adductomicsR"; version="1.12.0"; sha256="0623qf06xgdsyz0in2wnxwvpdw8kj6cnwf8vlqmgp7g0n3w701ys"; depends=[adductData ade4 AnnotationHub bootstrap data_table doSNOW dplyr DT ExperimentHub fastcluster foreach fpc mzR OrgMassSpecR pastecs pracma RcppEigen reshape2 rvest smoother zoo]; };
1059   affxparser = derive2 { name="affxparser"; version="1.68.1"; sha256="16x92gwsy7zdyz4md4cw847xn2ymqd6gqsn0rlr2nnf3qmnjnils"; depends=[]; };
1060   affy = derive2 { name="affy"; version="1.74.0"; sha256="02l77y4d4m4jwgkb3jdaskv6shmba5292whp0i29mg9asxv4rdc7"; depends=[affyio Biobase BiocGenerics BiocManager preprocessCore zlibbioc]; };
1061   affyContam = derive2 { name="affyContam"; version="1.54.0"; sha256="1pyd4rj6pp139kvhh97whi4afvx029w5lglr4mnscw7m3f618v0p"; depends=[affy affydata Biobase]; };
1062   affyILM = derive2 { name="affyILM"; version="1.48.0"; sha256="1rk68bhz2pyca4saiwd0kcw7sh2gs6d4c482jj4kx9r216mpb4q6"; depends=[affxparser affy Biobase gcrma]; };
1063   affyPLM = derive2 { name="affyPLM"; version="1.72.0"; sha256="1m3n5mvpg9g46rrglhdh94pppf71xp344yrcnw1i60vwv41vhbck"; depends=[affy Biobase BiocGenerics gcrma preprocessCore zlibbioc]; };
1064   affycomp = derive2 { name="affycomp"; version="1.72.0"; sha256="0aq5p56sqpvba0yhgd75302s9bazchh1izgymng6cpb78y5wfpj0"; depends=[Biobase]; };
1065   affycoretools = derive2 { name="affycoretools"; version="1.68.1"; sha256="05x64hy5jpmg973biwq4q9gzy1n0iqc0pxrix1f6bri1w6vil3ww"; depends=[affy AnnotationDbi Biobase BiocGenerics DBI edgeR gcrma ggplot2 Glimma GOstats gplots hwriter lattice limma oligoClasses ReportingTools RSQLite S4Vectors xtable]; };
1066   affyio = derive2 { name="affyio"; version="1.66.0"; sha256="19cw82qvzkz6vh2gm302y7digsf6xif7c9l2q9s6lkx2yflqpgfp"; depends=[zlibbioc]; };
1067   affylmGUI = derive2 { name="affylmGUI"; version="1.70.0"; sha256="0ic8cmssjpjkblrblfdpqqcaxn1izxk1hmcfdk1sphm7wfiw8l2n"; depends=[affy affyio affyPLM AnnotationDbi BiocGenerics BiocManager gcrma limma R2HTML tkrplot xtable]; };
1068   aggregateBioVar = derive2 { name="aggregateBioVar"; version="1.6.0"; sha256="0ngg12bgr95m4wm12scmrb55dgy4909c6qrg169l6dkng99v4nx1"; depends=[Matrix rlang S4Vectors SingleCellExperiment SummarizedExperiment tibble]; };
1069   agilp = derive2 { name="agilp"; version="3.28.0"; sha256="1pm329y2nfcnx98ggxq0prdd5pxfcl5iylvsjjnhw5lyz1awg1yf"; depends=[]; };
1070   airpart = derive2 { name="airpart"; version="1.4.0"; sha256="0ljankgvgf8rby4z340wxx8v7acs9yz955p3a40jl6y8rz1svc06"; depends=[apeglm clue ComplexHeatmap dplyr dynamicTreeCut emdbook forestplot ggplot2 lpSolve matrixStats mclust pbapply plyr RColorBrewer rlang S4Vectors scater SingleCellExperiment smurf SummarizedExperiment]; };
1071   alevinQC = derive2 { name="alevinQC"; version="1.12.1"; sha256="0g75qnz7ah0widdjn99lhvnacz38vgl9j86n65wyswsf413hz3bb"; depends=[cowplot dplyr DT GGally ggplot2 Rcpp rjson rlang rmarkdown shiny shinydashboard tximport]; };
1072   alpine = derive2 { name="alpine"; version="1.22.0"; sha256="1nl1hxwakh5m9rqm3ksn2jzknsj9xnwl51bmc30knknm4q35wdv9"; depends=[Biostrings GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph IRanges RBGL Rsamtools S4Vectors speedglm stringr SummarizedExperiment]; };
1073   altcdfenvs = derive2 { name="altcdfenvs"; version="2.58.0"; sha256="0caw9h0gw3qfrg4iqrydjdbagm059if513qjp1869cb0cq1w45r6"; depends=[affy Biobase BiocGenerics Biostrings hypergraph makecdfenv S4Vectors]; };
1074   amplican = derive2 { name="amplican"; version="1.18.0"; sha256="0q1c0g93xl0s2i6b1g21s11dngh7fbz63sn48yfiasvpxxlbag5q"; depends=[BiocGenerics BiocParallel Biostrings clusterCrit data_table dplyr GenomeInfoDb GenomicRanges ggplot2 ggthemes gridExtra gtable IRanges knitr Matrix matrixStats Rcpp rmarkdown S4Vectors ShortRead stringr waffle]; };
1075   animalcules = derive2 { name="animalcules"; version="1.12.0"; sha256="144949zlamwh0ykkw2n0qr019cn5pml95s3g59k5xkb85q6wykqc"; depends=[ape assertthat biomformat caret covr DESeq2 dplyr DT forcats ggplot2 glmnet GUniFrac lattice limma magrittr Matrix MultiAssayExperiment plotly plotROC rentrez reshape2 S4Vectors scales shiny shinyjs SummarizedExperiment tibble tsne umap vegan XML]; };
1076   annaffy = derive2 { name="annaffy"; version="1.68.0"; sha256="1fbqknwbl4534h66xrhcryg9pavm9fkja47gqbsxf8bd5yhk5mgq"; depends=[AnnotationDbi Biobase BiocManager DBI GO_db]; };
1077   annmap = derive2 { name="annmap"; version="1.38.0"; sha256="0ywqbb8jia7rrkzcsf6a11kqf8dnx96z8n8xw7067mahycykbixv"; depends=[Biobase BiocGenerics DBI digest genefilter GenomicRanges IRanges lattice RMySQL Rsamtools]; };
1078   annotate = derive2 { name="annotate"; version="1.74.0"; sha256="0x6vddpiw2g713vicf70198x8dlrwf36p8jjygdsfnl56ls5bh2g"; depends=[AnnotationDbi Biobase BiocGenerics DBI httr XML xtable]; };
1079   annotationTools = derive2 { name="annotationTools"; version="1.70.0"; sha256="122b424zida3j0vqkn8d06sg3jpc3ngsgidr8kgg00n4cjngkc51"; depends=[Biobase]; };
1080   annotatr = derive2 { name="annotatr"; version="1.22.0"; sha256="1fbax9v3d486c8lwf3yfjbf4w7zf53wmdpxk2clwm8ngm7w0pqm0"; depends=[AnnotationDbi AnnotationHub dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges readr regioneR reshape2 rtracklayer S4Vectors]; };
1081   anota = derive2 { name="anota"; version="1.44.0"; sha256="1x75r5znl8jllqsgzpxsqj62ch11bpwhmyzmbjmb8sz8f8ww923c"; depends=[multtest qvalue]; };
1082   anota2seq = derive2 { name="anota2seq"; version="1.18.0"; sha256="0mjgw1ncdl2pqqbkgsj8ws9nkj6zfh1dlygmh535jck6gg2rh454"; depends=[DESeq2 edgeR limma multtest qvalue RColorBrewer SummarizedExperiment]; };
1083   antiProfiles = derive2 { name="antiProfiles"; version="1.36.0"; sha256="1277kg5xpyb2yriyjy18p437q5lj22h4al7z7pygkzxzywxv9g40"; depends=[locfit matrixStats]; };
1084   apComplex = derive2 { name="apComplex"; version="2.62.0"; sha256="1h5xn9wm75rphikyjdnamyvlvqvy3hlgf4qgx540va9w7v9gfhqc"; depends=[graph org_Sc_sgd_db RBGL Rgraphviz]; };
1085   apeglm = derive2 { name="apeglm"; version="1.18.0"; sha256="1ppwk4g66x46hpqsfsvhl12398d1srqr47nmp0y2gz212kff0rby"; depends=[emdbook GenomicRanges Rcpp RcppEigen RcppNumerical SummarizedExperiment]; };
1086   appreci8R = derive2 { name="appreci8R"; version="1.14.0"; sha256="0r7x9dhy1bivcpqrcq43w2awg7y2ql92rarbvylxbzch8x07f70h"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 COSMIC_67 DT GenomicFeatures GenomicRanges GenomicScores Homo_sapiens IRanges MafDb_1Kgenomes_phase3_hs37d5 MafDb_ExAC_r1_0_hs37d5 MafDb_gnomADex_r2_1_hs37d5 openxlsx PolyPhen_Hsapiens_dbSNP131 rentrez Rsamtools rsnps S4Vectors seqinr shiny shinyjs SIFT_Hsapiens_dbSNP137 SNPlocs_Hsapiens_dbSNP144_GRCh37 stringr SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation XtraSNPlocs_Hsapiens_dbSNP144_GRCh37]; };
1087   aroma_light = derive2 { name="aroma.light"; version="3.26.0"; sha256="1240v9wvsf205g998ms19hncki8g6shidg09dy5np9pqpiix4vys"; depends=[matrixStats R_methodsS3 R_oo R_utils]; };
1088   arrayMvout = derive2 { name="arrayMvout"; version="1.54.0"; sha256="1wh4hhd9qq14137yp0zi39wh9m458vfcfff7dsfdzpra565sdrjn"; depends=[affy affyContam Biobase lumi mdqc parody]; };
1089   arrayQuality = derive2 { name="arrayQuality"; version="1.74.0"; sha256="0bqxnny60sx474kk5cxd0id6gm1slypp8sqah1m80wd0vpwmp575"; depends=[gridBase hexbin limma marray RColorBrewer]; };
1090   arrayQualityMetrics = derive2 { name="arrayQualityMetrics"; version="3.52.0"; sha256="0dqfl9agfr11mn38ibrf4jrfbhy4vcvn7ajd2mp7w2nmrfr0720i"; depends=[affy affyPLM beadarray Biobase genefilter gridSVG Hmisc hwriter lattice latticeExtra limma RColorBrewer setRNG svglite vsn XML]; };
1091   artMS = derive2 { name="artMS"; version="1.14.0"; sha256="0mdcvlpnjkkgp08kh3smx49pw1bav5zsynp4vak6m937ngccnzsr"; depends=[AnnotationDbi bit64 circlize cluster corrplot data_table dplyr getopt ggdendro ggplot2 ggrepel gplots limma MSstats openxlsx org_Hs_eg_db pheatmap plotly plyr RColorBrewer scales seqinr stringr tidyr UpSetR VennDiagram yaml]; };
1092   atSNP = derive2 { name="atSNP"; version="1.12.0"; sha256="0dmv34xqwr3l2rznapxmyrkyf1w78qzxdv88s5nn8s1m8qdkgwkz"; depends=[BiocFileCache BiocParallel BSgenome data_table ggplot2 lifecycle motifStack rappdirs Rcpp testthat]; };
1093   atena = derive2 { name="atena"; version="1.2.2"; sha256="0b89wb7cc44c8jd6868dn8pwgid768bprkncsi87qkdz0abbhzhp"; depends=[AnnotationHub BiocGenerics BiocParallel GenomeInfoDb GenomicAlignments GenomicRanges IRanges Matrix Rsamtools S4Vectors scales sparseMatrixStats SQUAREM SummarizedExperiment]; };
1094   attract = derive2 { name="attract"; version="1.48.0"; sha256="0f1fsv278kpnxvqg9qa5rw2k3zr8zws0ab73ldl60h6pv9cy8x82"; depends=[AnnotationDbi Biobase cluster GOstats KEGGREST limma org_Hs_eg_db reactome_db]; };
1095   autonomics = derive2 { name="autonomics"; version="1.4.0"; sha256="00k04pp81s6s3dyzykh0cqn27gxyk2brkl0k8g40b8rh13s1w8qy"; depends=[abind assertive BiocFileCache BiocGenerics colorspace data_table edgeR ggplot2 ggrepel gridExtra limma magrittr matrixStats MultiAssayExperiment pcaMethods R_utils rappdirs readxl rlang S4Vectors scales stringi SummarizedExperiment tidyr]; };
1096   awst = derive2 { name="awst"; version="1.4.0"; sha256="0iw3zycmj95rmdx7f2w0j4yxkzd90y87lrzgdn9cyvvzi5avflav"; depends=[SummarizedExperiment]; };
1097   bacon = derive2 { name="bacon"; version="1.24.0"; sha256="1zvcxdj3r892898ik5gq3jdbfig1438qws4bwd465ik8vi7g39v8"; depends=[BiocParallel ellipse ggplot2]; };
1098   ballgown = derive2 { name="ballgown"; version="2.28.0"; sha256="0l8q3fymskxmsi5jcikzjz5xi66lpzgv7bjymir4izah2v68z708"; depends=[Biobase GenomeInfoDb GenomicRanges IRanges limma RColorBrewer rtracklayer S4Vectors sva]; };
1099   bambu = derive2 { name="bambu"; version="2.2.0"; sha256="0dc2hpnykr575jbrq9whmdabknl70s2hcs6gkmkl4kpv7xfqdq6w"; depends=[BiocGenerics BiocParallel BSgenome data_table dplyr GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rcpp RcppArmadillo Rsamtools S4Vectors SummarizedExperiment tidyr xgboost]; };
1100   bamsignals = derive2 { name="bamsignals"; version="1.28.0"; sha256="0ywbxq829hclhr5bb6p77rspxvfs580zlwd2f5kr3an6rdgyx9ky"; depends=[BiocGenerics GenomicRanges IRanges Rcpp Rhtslib zlibbioc]; };
1101   bandle = derive2 { name="bandle"; version="1.0.0"; sha256="1f18k23hdjasbds37dsmd31ns4p1jm6bqfllw5za64z0mzd3dd29"; depends=[BH Biobase BiocParallel BiocStyle circlize dplyr ggalluvial ggplot2 ggrepel knitr lbfgs MSnbase plyr pRoloc pRolocdata Rcpp RcppArmadillo rlang robustbase S4Vectors tidyr]; };
1102   banocc = derive2 { name="banocc"; version="1.20.0"; sha256="10vaggq1w5jkxd8r2k1mhymzvb7x3h8afwn2pvmcpj022ka7xhbx"; depends=[coda mvtnorm rstan stringr]; };
1103   barcodetrackR = derive2 { name="barcodetrackR"; version="1.4.0"; sha256="0yxa15xkgqazw31vq4wm8v747bw4qb18m6i602pvynk0n5bgg3d3"; depends=[circlize cowplot dplyr ggdendro ggplot2 ggridges magrittr plyr proxy RColorBrewer rlang S4Vectors scales shiny SummarizedExperiment tibble tidyr vegan viridis]; };
1104   basecallQC = derive2 { name="basecallQC"; version="1.20.0"; sha256="07mcg0bs13apabhsip997nj6riqdrv9247azg379z6anaa0b0vpd"; depends=[data_table dplyr DT ggplot2 knitr lazyeval magrittr prettydoc raster rmarkdown ShortRead stringr tidyr XML yaml]; };
1105   basilisk = derive2 { name="basilisk"; version="1.8.1"; sha256="134xix2iq5l7783dng2jjklxd3m5lh4snb7bjhslrs2r1j3p8jpk"; depends=[basilisk_utils dir_expiry reticulate]; };
1106   basilisk_utils = derive2 { name="basilisk.utils"; version="1.8.0"; sha256="1jnqv0rlljkq27rd4ixl763v335f2aanm4fzr386yc81fj4vnmhk"; depends=[dir_expiry]; };
1107   batchelor = derive2 { name="batchelor"; version="1.12.3"; sha256="00ix3hvhgalxg63qnynv2waa273jk336lg47k72qwxfzimsxfjxc"; depends=[beachmat BiocGenerics BiocNeighbors BiocParallel BiocSingular DelayedArray DelayedMatrixStats igraph Matrix Rcpp ResidualMatrix S4Vectors ScaledMatrix scuttle SingleCellExperiment SummarizedExperiment]; };
1108   bayNorm = derive2 { name="bayNorm"; version="1.14.0"; sha256="12896sryq5bfbqglpk3dg9cdsq6rk3jhzdqcpyasvk6w7v1w8bin"; depends=[BB BiocParallel doSNOW fitdistrplus foreach iterators locfit MASS Matrix Rcpp RcppArmadillo RcppProgress SingleCellExperiment SummarizedExperiment]; };
1109   baySeq = derive2 { name="baySeq"; version="2.30.0"; sha256="1yqykndyv32s2rk7x86qf410qr0pigc8z4gdkl8vhj4dgyr47n2j"; depends=[abind edgeR GenomicRanges]; };
1110   bcSeq = derive2 { name="bcSeq"; version="1.18.0"; sha256="0bn3maqxayprrd73gwvxgqkk0zqc0nanw29wsnmvw7z1bd15zqy0"; depends=[Biostrings Matrix Rcpp]; };
1111   beachmat = derive2 { name="beachmat"; version="2.12.0"; sha256="0fc6vvjjq1mfjfj2zqkap3rwvinnfqjs0cpk1447sspvd1rjya8c"; depends=[BiocGenerics DelayedArray Matrix Rcpp]; };
1112   beadarray = derive2 { name="beadarray"; version="2.46.0"; sha256="09n38fmckc0zbsv150x8k7l0xqbbjjkxnyqx84lfxqjxs592dvjy"; depends=[AnnotationDbi BeadDataPackR Biobase BiocGenerics GenomicRanges ggplot2 hexbin illuminaio IRanges limma reshape2]; };
1113   beadarraySNP = derive2 { name="beadarraySNP"; version="1.62.0"; sha256="0f07mjxm3d5636rd668i5710r57zkhn1j642ivghs61bjgmb3a01"; depends=[Biobase quantsmooth]; };
1114   beer = derive2 { name="beer"; version="1.0.0"; sha256="15s7ygx63by28hjks3b5w5ig72zvlzb8lxp1mv9vzzxjhp8jq33p"; depends=[BiocParallel cli edgeR PhIPData progressr rjags SummarizedExperiment]; };
1115   benchdamic = derive2 { name="benchdamic"; version="1.2.5"; sha256="16mrc5mybi8sz0v7xh5z4i5vd7p9wg8cry83gj62ka3vznd7y9qk"; depends=[ALDEx2 ANCOMBC BiocParallel cowplot dearseq DESeq2 edgeR ggdendro ggplot2 ggridges limma MAST metagenomeSeq MGLM NOISeq phyloseq plyr RColorBrewer reshape2 Seurat SummarizedExperiment tidytext TreeSummarizedExperiment zinbwave]; };
1116   bgx = derive2 { name="bgx"; version="1.62.0"; sha256="0q2y4n6bcc9pvz5sgfkw1lrb00rrp7q29i1vh7srdfmfhgpyz6bk"; depends=[affy Biobase gcrma Rcpp]; };
1117   bigPint = derive2 { name="bigPint"; version="1.12.0"; sha256="1hp69j2qcidrxqs3dxjjngb09nbzp5x2yy4jz1rjmv6ghif9ccfj"; depends=[DelayedArray dplyr GGally ggplot2 gridExtra hexbin Hmisc htmlwidgets plotly plyr RColorBrewer reshape shiny shinycssloaders shinydashboard stringr SummarizedExperiment tidyr]; };
1118   bigmelon = derive2 { name="bigmelon"; version="1.22.0"; sha256="1msch4qbifkdqv0bbw03xj6d9w28z91mf4ki41rqg6048cq17h2k"; depends=[Biobase BiocGenerics gdsfmt GEOquery illuminaio methylumi minfi wateRmelon]; };
1119   bioCancer = derive2 { name="bioCancer"; version="1.24.01"; sha256="0dyxwms1s19bmj5691fqk51ig2b0s5yf62j12gpd0xv1arcc2zy1"; depends=[AlgDesign AnnotationDbi Biobase clusterProfiler DiagrammeR DOSE dplyr DT geNetClassifier GO_db htmlwidgets httr org_Bt_eg_db org_Hs_eg_db plyr r_import R_methodsS3 R_oo radiant_data reactome_db ReactomePA shiny shinythemes tibble visNetwork XML]; };
1120   bioDist = derive2 { name="bioDist"; version="1.68.0"; sha256="04nrvrcvpj0sn8p2i8n3ggsl2s7r4na576174i7bn1sj21vr0yb0"; depends=[Biobase KernSmooth]; };
1121   bioassayR = derive2 { name="bioassayR"; version="1.34.0"; sha256="0zbrci0vgk4qca28i0qb2izhyrz3r95l1w54h9h3zj9f3vd61wrz"; depends=[BiocGenerics ChemmineR DBI Matrix rjson RSQLite XML]; };
1122   biobroom = derive2 { name="biobroom"; version="1.28.0"; sha256="04x1z9nchm4mbhqr31011zdprc4md156j4zf003s7xx0n278xsgh"; depends=[Biobase broom dplyr tidyr]; };
1123   biobtreeR = derive2 { name="biobtreeR"; version="1.8.0"; sha256="0cx46hdqqm6mbj0vp4y86axv0qccd4sgk2jwwjvnqp5pynq9bbqa"; depends=[httpuv httr jsonlite stringi]; };
1124   biocGraph = derive2 { name="biocGraph"; version="1.58.0"; sha256="1y59a7c4ahhn1g2wz2hkx83izfn8i85mmxxp63jdd0rg7zwhr6nn"; depends=[BiocGenerics geneplotter graph Rgraphviz]; };
1125   biocViews = derive2 { name="biocViews"; version="1.64.1"; sha256="0ixcx9qqpmwmnhml3klk5z075km8g2l4q0iqc1dbniga87qgyl38"; depends=[Biobase BiocManager graph RBGL RCurl RUnit XML]; };
1126   biocthis = derive2 { name="biocthis"; version="1.6.0"; sha256="1hdgjp00d2si3mr7m1d289i9wn7g927z6n8n27d5sm94lb91qln0"; depends=[BiocManager fs glue rlang styler usethis]; };
1127   biodb = derive2 { name="biodb"; version="1.4.2"; sha256="0f3clqmrpaawhjjyb4x5mnbhsam56r0av05b5cl5p4waylp8qbs1"; depends=[BiocFileCache chk jsonlite lgr lifecycle openssl plyr progress R6 rappdirs Rcpp RCurl RSQLite stringr testthat withr XML yaml]; };
1128   biodbChebi = derive2 { name="biodbChebi"; version="1.2.0"; sha256="14sgjlklrvdz6wrsk8qbfmv98q8wcr229w1ra1kif7agvdqdw0ad"; depends=[biodb R6]; };
1129   biodbExpasy = derive2 { name="biodbExpasy"; version="1.0.0"; sha256="1a2g0i5jb6i3qvldiy1msdcpv3w65jpay2iavzmzsp228jp49v5f"; depends=[biodb chk R6 stringr]; };
1130   biodbHmdb = derive2 { name="biodbHmdb"; version="1.2.0"; sha256="16vmp1z1b0jsap7xd7wcr0fbpl75srrswmqhcq26biy23w1r93kj"; depends=[biodb R6 Rcpp testthat]; };
1131   biodbKegg = derive2 { name="biodbKegg"; version="1.2.1"; sha256="0227nnqfyylghn3gb5ps26ak18hvbjhplxrnwg2lcccd5mi67hwh"; depends=[biodb chk lifecycle R6]; };
1132   biodbLipidmaps = derive2 { name="biodbLipidmaps"; version="1.2.0"; sha256="0zbw7jmkq3zaf2mp86yizsfm4nyamgi2fnlhn5bl0wvd01jrjlc0"; depends=[biodb lifecycle R6]; };
1133   biodbMirbase = derive2 { name="biodbMirbase"; version="1.0.0"; sha256="1ci7wf0wkqvrwqw04z57i0l9ldgzgmhwfwv69yrrz1a9yjfq82q6"; depends=[biodb chk R6 stringr]; };
1134   biodbNcbi = derive2 { name="biodbNcbi"; version="1.0.0"; sha256="1ymngw0wy2jr853v0r1gf3nb1q596f03gjhxxf0x2pkblpp85mqz"; depends=[biodb chk R6 XML]; };
1135   biodbNci = derive2 { name="biodbNci"; version="1.0.0"; sha256="19gv91mqscdzpxcia32hc03v62icjd79c8bkkmi2nmvaa4zsyjii"; depends=[biodb chk R6 Rcpp testthat]; };
1136   biodbUniprot = derive2 { name="biodbUniprot"; version="1.2.1"; sha256="1cxmjq5f92is9ckqm61fj6syb2yw9i1pxj54yr268l2l67kz89vn"; depends=[biodb R6]; };
1137   biomaRt = derive2 { name="biomaRt"; version="2.52.0"; sha256="0yn3kanyrplc89a900xiz33nw1v23mkljvd5isizgs8gzvwzf8xg"; depends=[AnnotationDbi BiocFileCache digest httr progress rappdirs stringr XML xml2]; };
1138   biomformat = derive2 { name="biomformat"; version="1.24.0"; sha256="12wqjipxhngmlnrdmx329dqmkmy2wa4nkkrhwaqv2nwy90dncs9n"; depends=[jsonlite Matrix plyr rhdf5]; };
1139   biomvRCNS = derive2 { name="biomvRCNS"; version="1.36.0"; sha256="0i576g7pkivqaxff1pkb760mdpx8v9fh071aic1mwfnlfa7k87ln"; depends=[GenomicRanges Gviz IRanges mvtnorm]; };
1140   biosigner = derive2 { name="biosigner"; version="1.24.2"; sha256="0vdv2by3qv7y8vzr8qgg7apwwgsa0fhlfrhzns7g3nas7883c89m"; depends=[Biobase e1071 MultiAssayExperiment MultiDataSet randomForest ropls SummarizedExperiment]; };
1141   biotmle = derive2 { name="biotmle"; version="1.20.0"; sha256="1frig90krvfdk6nwpmslpj0pvligyzwzfwwci7hzwcmbglk5jj22"; depends=[assertthat BiocGenerics BiocParallel dplyr drtmle ggplot2 ggsci limma S4Vectors SummarizedExperiment superheat tibble]; };
1142   biovizBase = derive2 { name="biovizBase"; version="1.44.0"; sha256="1ffzf7yvl47l8v8a50m8g9q33hgwvxg4fcm8ld2yy8hd2zl86zyd"; depends=[AnnotationDbi AnnotationFilter BiocGenerics Biostrings dichromat ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Hmisc IRanges RColorBrewer rlang Rsamtools S4Vectors scales SummarizedExperiment VariantAnnotation]; };
1143   biscuiteer = derive2 { name="biscuiteer"; version="1.10.0"; sha256="0y7vbdaafiga16yr0d22w1v4p0jmczndcar0r0km06f5y1b74amr"; depends=[Biobase BiocGenerics BiocParallel biscuiteerData bsseq data_table DelayedMatrixStats dmrseq GenomeInfoDb GenomicRanges gtools HDF5Array Homo_sapiens impute IRanges Matrix matrixStats Mus_musculus QDNAseq qualV R_utils readr Rsamtools rtracklayer S4Vectors SummarizedExperiment VariantAnnotation]; };
1144   blacksheepr = derive2 { name="blacksheepr"; version="1.10.0"; sha256="1b3ij0rzri4xxldinpk632m2px228xl1fy6vgj4f8mawymlfl6h7"; depends=[circlize ComplexHeatmap pasilla RColorBrewer SummarizedExperiment viridis]; };
1145   blima = derive2 { name="blima"; version="1.30.0"; sha256="1h3bnwlsi14l1f4kdmv6qqypfa09gml812k6fdni0i6m9g79yylv"; depends=[beadarray Biobase BiocGenerics Rcpp]; };
1146   bluster = derive2 { name="bluster"; version="1.6.0"; sha256="1g496yc7mdhshf6r0n8xhj7ax936ia5z2cx72lqyk2vzzzl5c4v8"; depends=[BiocNeighbors BiocParallel cluster igraph Matrix Rcpp S4Vectors]; };
1147   bnbc = derive2 { name="bnbc"; version="1.18.0"; sha256="1d2m98vpjl2ibzx61rr9a95v7wa5zz2s2bnymwmm08445dv33sy2"; depends=[BiocGenerics data_table EBImage GenomeInfoDb GenomicRanges IRanges matrixStats preprocessCore Rcpp rhdf5 S4Vectors SummarizedExperiment sva]; };
1148   bnem = derive2 { name="bnem"; version="1.4.0"; sha256="1qh3kxy09q29s9sg17gg3yhvcq3p99mnvr6zm91izf8fgyivz912"; depends=[affy binom Biobase CellNOptR cluster epiNEM flexclust graph limma matrixStats mnem RColorBrewer Rgraphviz rmarkdown snowfall sva vsn]; };
1149   borealis = derive2 { name="borealis"; version="1.0.1"; sha256="0glldfg1h480fpm5wpsqq6mffnkwvfknpl2hdvxvwnarqv0qiz7s"; depends=[Biobase bsseq cowplot doParallel dplyr DSS foreach gamlss gamlss_dist GenomicRanges ggplot2 plyr purrr R_utils rlang snow]; };
1150   brainflowprobes = derive2 { name="brainflowprobes"; version="1.10.0"; sha256="0vyzw4i28bz15z06rz57h1ipcxs5lqlwcpf58a1wz0gzn5na11js"; depends=[Biostrings BSgenome_Hsapiens_UCSC_hg19 bumphunter cowplot derfinder derfinderPlot GenomicRanges GenomicState ggplot2 RColorBrewer]; };
1151   branchpointer = derive2 { name="branchpointer"; version="1.22.0"; sha256="0rsfx60l6972nz4kpjly0h4sm48flfrwskgh1shl3hbq3bnli18b"; depends=[biomaRt Biostrings BSgenome_Hsapiens_UCSC_hg38 caret cowplot data_table gbm GenomeInfoDb GenomicRanges ggplot2 IRanges kernlab plyr rtracklayer S4Vectors stringr]; };
1152   breakpointR = derive2 { name="breakpointR"; version="1.14.0"; sha256="0mx8lk8q69jq5wqwhp7qvqv1zvm3hj6z53z3sil0470ri7jdyh6l"; depends=[BiocGenerics breakpointRdata cowplot doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gtools IRanges Rsamtools S4Vectors]; };
1153   brendaDb = derive2 { name="brendaDb"; version="1.10.0"; sha256="0wg52zq664zdv8lh4s6662wrwwxf9blrpag7b89ywz8p8rsnnmvm"; depends=[BiocFileCache BiocParallel crayon curl dplyr magrittr purrr rappdirs Rcpp rlang stringr tibble tidyr xml2]; };
1154   bridge = derive2 { name="bridge"; version="1.60.0"; sha256="0w8l5fzid3iz7pb8wdggx2xli2jgcgyxvgnij2jl5blkg1dfzhc5"; depends=[rama]; };
1155   bsseq = derive2 { name="bsseq"; version="1.32.0"; sha256="1jpfib2vb6hd7pgh3d33jgch24lba175zmbalwsbgvlmmyyf1ki5"; depends=[beachmat Biobase BiocGenerics BiocParallel Biostrings BSgenome data_table DelayedArray DelayedMatrixStats GenomeInfoDb GenomicRanges gtools HDF5Array IRanges limma locfit permute R_utils Rcpp rhdf5 S4Vectors scales SummarizedExperiment]; };
1156   bugsigdbr = derive2 { name="bugsigdbr"; version="1.2.2"; sha256="0jrvxlpc18gr5ba5r4pqrwzy9q6v03q26v150b2cb5b5nz4k8mbk"; depends=[BiocFileCache vroom]; };
1157   bumphunter = derive2 { name="bumphunter"; version="1.38.0"; sha256="0k92ps9chqsimbc7vsr8swg679zfv8nfn5zahbqq4nknhhy7hwxw"; depends=[AnnotationDbi BiocGenerics doRNG foreach GenomeInfoDb GenomicFeatures GenomicRanges IRanges iterators limma locfit matrixStats S4Vectors]; };
1158   cBioPortalData = derive2 { name="cBioPortalData"; version="2.8.2"; sha256="09bjlyr4l7iifgk39kkn3bq9lddvsgg2qj362xxy6z8igzblm05x"; depends=[AnVIL BiocFileCache digest dplyr GenomeInfoDb GenomicRanges httr IRanges MultiAssayExperiment RaggedExperiment readr RTCGAToolbox S4Vectors SummarizedExperiment TCGAutils tibble tidyr]; };
1159   cTRAP = derive2 { name="cTRAP"; version="1.14.1"; sha256="1dsn2g0qnvv2qvkd9c1la20585z7pvhzzbr30y45sh271s27pa12"; depends=[AnnotationDbi AnnotationHub binr cowplot data_table dplyr DT fastmatch fgsea ggplot2 ggrepel highcharter htmltools httr limma pbapply purrr qs R_utils readxl reshape2 rhdf5 rlang scales shiny shinycssloaders tibble]; };
1160   caOmicsV = derive2 { name="caOmicsV"; version="1.25.0"; sha256="10i4imjihmssdwfys21fsqng8zfp7sxzkc58m8qmnh6s5sccb3sz"; depends=[bc3net igraph]; };
1161   cageminer = derive2 { name="cageminer"; version="1.2.5"; sha256="1aq9q9cl75zscddmr3ijzyr9cn9cjdirvi0rl4jlnrpqkyh60x1i"; depends=[BioNERO GenomeInfoDb GenomicRanges ggbio ggplot2 ggtext IRanges reshape2]; };
1162   calm = derive2 { name="calm"; version="1.10.0"; sha256="0fmi5s7g9xcbznd4g4hngp1rgy4anwdqxi1isp40anyhgmn3i3kj"; depends=[mgcv]; };
1163   canceR = derive2 { name="canceR"; version="1.30.01"; sha256="1fv3dl7r67xhzzdrcwqyhr3g5pz8im0ll2rnyixskp1w55b98kjg"; depends=[Biobase circlize Formula geNetClassifier GSEABase httr phenoTest plyr R_methodsS3 R_oo rpart RUnit survival tkrplot]; };
1164   cancerclass = derive2 { name="cancerclass"; version="1.40.0"; sha256="1s80w8ksf735ps677c7dcwkkpq1ynjqmp2r4biqav4j1y50nbi57"; depends=[binom Biobase]; };
1165   casper = derive2 { name="casper"; version="2.30.0"; sha256="0rx23ppj78m7dinvrim3hdh330xdlv2yw5405akd32dxr5dhp0wh"; depends=[Biobase BiocGenerics coda EBarrays gaga GenomeInfoDb GenomicFeatures GenomicRanges gtools IRanges limma mgcv Rsamtools rtracklayer S4Vectors sqldf survival VGAM]; };
1166   categoryCompare = derive2 { name="categoryCompare"; version="1.40.0"; sha256="1bidg957kjfg16w07gdbb8ygzipg2c47by9wilj4ijm32czv2ls7"; depends=[annotate AnnotationDbi Biobase BiocGenerics Category colorspace GOstats graph GSEABase hwriter RCy3]; };
1167   cbaf = derive2 { name="cbaf"; version="1.18.4"; sha256="1iqjqigb24qkj4wyci2q9f5nrgz1fnm0fl9xfjpjw1sx2csqgirz"; depends=[BiocFileCache cBioPortalData genefilter gplots openxlsx RColorBrewer]; };
1168   cbpManager = derive2 { name="cbpManager"; version="1.4.0"; sha256="0h60a4cx3cgzbs9mchdasy7vgh6rm8vqp5w770328jwq9wyj3xkr"; depends=[basilisk dplyr DT htmltools jsonlite magrittr markdown plyr rapportools reticulate rintrojs shiny shinyBS shinycssloaders shinydashboard vroom]; };
1169   ccfindR = derive2 { name="ccfindR"; version="1.16.0"; sha256="1gg5508qxhv0g4k3m1iy3bzs53wlqbvnx3lsm77zmxhng38zzniv"; depends=[ape gtools irlba Matrix RColorBrewer Rcpp RcppEigen Rdpack Rmpi Rtsne S4Vectors SingleCellExperiment SummarizedExperiment]; };
1170   ccmap = derive2 { name="ccmap"; version="1.22.0"; sha256="03rw2k0ln1lr4c0sz06x1b8wyriq659bvngbb9wyr4mkcbjz5jy7"; depends=[AnnotationDbi BiocManager ccdata data_table doParallel foreach lsa xgboost]; };
1171   ccrepe = derive2 { name="ccrepe"; version="1.32.0"; sha256="04dmka519ppp6c68wdw98qfi897jad5wr9az0j09kyzk92mkcl10"; depends=[infotheo]; };
1172   ceRNAnetsim = derive2 { name="ceRNAnetsim"; version="1.8.0"; sha256="1bl7nasll5p18b0g8q1d0wfx2min8897pkkw0hfp6ir6d85fkj4f"; depends=[dplyr furrr future ggplot2 ggraph igraph purrr rlang tibble tidygraph tidyr]; };
1173   celaref = derive2 { name="celaref"; version="1.14.0"; sha256="0pnnk7rq4yrl33ycxsxak3zz104350rzldi7hdnrp5aghr0jxjl6"; depends=[BiocGenerics DelayedArray dplyr ggplot2 magrittr MAST Matrix readr rlang S4Vectors SummarizedExperiment tibble]; };
1174   celda = derive2 { name="celda"; version="1.12.0"; sha256="1qqm4pags5bp08w70419qlaghfr3r3pmb870k8ax9snbiqx32sp3"; depends=[circlize ComplexHeatmap data_table dbscan DelayedArray digest doParallel enrichR foreach ggplot2 ggrepel gtable Matrix matrixStats MCMCprecision multipanelfigure plyr RColorBrewer Rcpp RcppEigen reshape2 Rtsne S4Vectors scales scater scran SingleCellExperiment stringr SummarizedExperiment uwot withr]; };
1175   cellHTS2 = derive2 { name="cellHTS2"; version="2.60.0"; sha256="1mrf7mdhcbvvcizc8nr8mr6xp6k9zv6v97p3zz173iqhlwf0mvvn"; depends=[Biobase BiocGenerics Category genefilter GSEABase hwriter locfit RColorBrewer splots vsn]; };
1176   cellTree = derive2 { name="cellTree"; version="1.26.0"; sha256="0zpf05w4bcnjfzb8jqq936rs5ji84gpn72bndsk6ipg8s4lh0bav"; depends=[gplots igraph maptpx slam topGO topicmodels xtable]; };
1177   cellbaseR = derive2 { name="cellbaseR"; version="1.20.1"; sha256="15y11jykxm3c681lr277zvzwsfbz0rxfzmdwanlmh0akafyl6nr6"; depends=[BiocParallel data_table doParallel foreach httr jsonlite pbapply R_utils Rsamtools tidyr]; };
1178   cellity = derive2 { name="cellity"; version="1.24.0"; sha256="0ywghrfj6m6hcz9yvpq0ww3p05rxdrfjna7il9faa76va5m8ssly"; depends=[AnnotationDbi e1071 ggplot2 mvoutlier org_Hs_eg_db org_Mm_eg_db robustbase topGO]; };
1179   cellmigRation = derive2 { name="cellmigRation"; version="1.4.0"; sha256="09c6rmraajiqx7hgxmjyx4h32gdjy849ymyid0zvxqq4cfrx0pbs"; depends=[doParallel FactoMineR FME foreach Hmisc matrixStats reshape2 sp SpatialTools tiff vioplot]; };
1180   cellscape = derive2 { name="cellscape"; version="1.20.0"; sha256="1k0z7sw4d3wxy4sz42b6aplq2njm673sfqgzzyf6m8iax2rvgvhs"; depends=[dplyr gtools htmlwidgets jsonlite plyr reshape2 stringr]; };
1181   cellxgenedp = derive2 { name="cellxgenedp"; version="1.0.1"; sha256="1p2ajvsnrsz3kl1xkpvja5pxk3qycx0dvmnrwxwij3z15kgbcm2b"; depends=[cpp11 curl dplyr DT httr jsonlite shiny]; };
1182   censcyt = derive2 { name="censcyt"; version="1.4.0"; sha256="03cr3l893b6250339d60xpf5mqcjl38fa9cpihy5gl83iy3dz9x4"; depends=[BiocParallel broom_mixed diffcyt dirmult dplyr edgeR fitdistrplus lme4 magrittr MASS mice multcomp purrr rlang S4Vectors stringr SummarizedExperiment survival tibble tidyr]; };
1183   cfDNAPro = derive2 { name="cfDNAPro"; version="1.2.0"; sha256="1bbmp324nl2ijbifhqyw074s2na391c359iyq03w73yd86w8fcc0"; depends=[dplyr ggplot2 magrittr quantmod rlang Rsamtools stringr]; };
1184   cghMCR = derive2 { name="cghMCR"; version="1.54.0"; sha256="0761pjajxgavxmrljzwksw0awdqrqxbi9cadqgixc0sj94rz82rd"; depends=[BiocGenerics CNTools DNAcopy limma]; };
1185   chimeraviz = derive2 { name="chimeraviz"; version="1.22.0"; sha256="06m60db90fnhm3r82n5zdbnwqlqnnc93cacaidizm5c29f7f3h40"; depends=[AnnotationDbi AnnotationFilter BiocStyle Biostrings checkmate data_table dplyr DT ensembldb GenomeInfoDb GenomicAlignments GenomicRanges graph gtools Gviz IRanges magick org_Hs_eg_db org_Mm_eg_db plyr RCircos RColorBrewer Rgraphviz rmarkdown Rsamtools S4Vectors]; };
1186   chipenrich = derive2 { name="chipenrich"; version="2.20.0"; sha256="0nfxhghkygn16j21031kdwh27vmwzlvsj6cn7a9bcd2vr34kq31g"; depends=[AnnotationDbi BiocGenerics chipenrich_data GenomeInfoDb GenomicRanges IRanges lattice latticeExtra MASS mgcv org_Dm_eg_db org_Dr_eg_db org_Hs_eg_db org_Mm_eg_db org_Rn_eg_db plyr rms rtracklayer S4Vectors stringr]; };
1187   chipseq = derive2 { name="chipseq"; version="1.46.0"; sha256="1vh0hvgnw7ykj401v1q807sl14s4nixp1d8xbm41n01q6w8x834i"; depends=[BiocGenerics GenomicRanges IRanges lattice S4Vectors ShortRead]; };
1188   chopsticks = derive2 { name="chopsticks"; version="1.62.0"; sha256="0zhf3s8pbgvk1g2qkp1hs1yhsg87hpf71pf9v9sczcggnwcrgj8r"; depends=[survival]; };
1189   chromDraw = derive2 { name="chromDraw"; version="2.26.0"; sha256="0x6znw33r7791cs7504kih12r9alcvsvk2z8in98nhndzlfr99qh"; depends=[GenomicRanges Rcpp]; };
1190   chromPlot = derive2 { name="chromPlot"; version="1.24.0"; sha256="02k7l22hjvmkvnva28plbrxv87v7krbjivs2bxrl5jw6ksc5m4mj"; depends=[biomaRt GenomicRanges]; };
1191   chromVAR = derive2 { name="chromVAR"; version="1.18.0"; sha256="0vhsvkm4kvln0002f13ayk57f9fmiz1kw9vwpsm1vds1vahd656m"; depends=[BiocGenerics BiocParallel Biostrings BSgenome DT GenomeInfoDb GenomicRanges ggplot2 IRanges Matrix miniUI nabor plotly RColorBrewer Rcpp RcppArmadillo Rsamtools Rtsne S4Vectors shiny SummarizedExperiment TFBSTools]; };
1192   chromstaR = derive2 { name="chromstaR"; version="1.22.0"; sha256="1xjwmnr4hk8v3nwvhqd6ixk5qr2dv0n4mb9wd6nl7cgjfhjsdgj7"; depends=[bamsignals BiocGenerics chromstaRData doParallel foreach GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges mvtnorm reshape2 Rsamtools S4Vectors]; };
1193   chromswitch = derive2 { name="chromswitch"; version="1.18.0"; sha256="1sdgmigr89kbbm2rcbjkjv9z8ig332a1lnk3mqpa15bkpapw7abm"; depends=[Biobase BiocParallel cluster dplyr GenomicRanges gplots IRanges lazyeval magrittr matrixStats NMF rtracklayer S4Vectors tidyr]; };
1194   cicero = derive2 { name="cicero"; version="1.14.0"; sha256="1ip12ijazlmcfbym078slxykpkz7d1zwvs8l8aqdnqpxjfk1ipx5"; depends=[assertthat Biobase BiocGenerics data_table dplyr FNN GenomicRanges ggplot2 glasso Gviz igraph IRanges Matrix monocle plyr reshape2 S4Vectors stringi stringr tibble tidyr VGAM]; };
1195   circRNAprofiler = derive2 { name="circRNAprofiler"; version="1.10.0"; sha256="1gwm416shhv2p3gh1n6kv1rvx0n0imy25b7z62z4s8b3gs3nfp5j"; depends=[AnnotationHub Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 DESeq2 dplyr edgeR GenomeInfoDb GenomicRanges ggplot2 gwascat IRanges magrittr R_utils readr reshape2 rlang rtracklayer S4Vectors seqinr stringi stringr universalmotif]; };
1196   cisPath = derive2 { name="cisPath"; version="1.36.0"; sha256="07h948mxn2zjylv2y5q5w6rwqqmmha21xgwqpckzhgjh310jj674"; depends=[]; };
1197   cleanUpdTSeq = derive2 { name="cleanUpdTSeq"; version="1.34.0"; sha256="1n1j9cz2v5bd0dbmpbb7pggixjsvyx3dfqjkmmqxir3dddbp6d0c"; depends=[Biostrings BSgenome BSgenome_Drerio_UCSC_danRer7 e1071 GenomeInfoDb GenomicRanges IRanges S4Vectors seqinr stringr]; };
1198   cleaver = derive2 { name="cleaver"; version="1.34.1"; sha256="1ycrx0n2ignhmgb87is4qm6sv1z0m6a5c8sg3xn0cw9y4abjkgdf"; depends=[Biostrings IRanges S4Vectors]; };
1199   cliProfiler = derive2 { name="cliProfiler"; version="1.2.0"; sha256="08hvj9zk42hf4r0cdd5pqxm2mk15salhk031fqbbks048hnqs42v"; depends=[Biostrings BSgenome dplyr GenomicRanges ggplot2 rtracklayer S4Vectors]; };
1200   clippda = derive2 { name="clippda"; version="1.46.0"; sha256="1nhkf1nchxf26b05bdi4qz1asyrbxgi80irx80w1scijn33yv3d7"; depends=[Biobase lattice limma rgl scatterplot3d statmod]; };
1201   clipper = derive2 { name="clipper"; version="1.36.1"; sha256="0c58kwrlfbrnzwgh3amjby1bbk519rx4l6767b2ivx6qrpxcng6p"; depends=[Biobase corpcor graph gRbase igraph KEGGgraph Matrix qpgraph RBGL Rcpp]; };
1202   cliqueMS = derive2 { name="cliqueMS"; version="1.10.0"; sha256="1fp5222wi91wk1fnw29gaiv02asidhrxzaq3da9isgjjvvr1gx63"; depends=[BH igraph matrixStats MSnbase qlcMatrix Rcpp RcppArmadillo xcms]; };
1203   clonotypeR = derive2 { name="clonotypeR"; version="1.34.0"; sha256="15nnj6c23bcnln1xsmxs7f13m13lvn6did7lvp7ij8gcb0vg2g6q"; depends=[]; };
1204   clst = derive2 { name="clst"; version="1.44.0"; sha256="0smr6kh6rk10zd2k8si79l3wdl2gdk6h3fh345a8m19rkv6sy455"; depends=[lattice ROC]; };
1205   clstutils = derive2 { name="clstutils"; version="1.44.0"; sha256="0w2gki24xf9m8qh1289hns8bkr7gj6big21lyb4p2mp652z1daw7"; depends=[ape clst lattice rjson RSQLite]; };
1206   clustComp = derive2 { name="clustComp"; version="1.24.0"; sha256="1svj1xvg8cn1hm5snw8yv764382vc41m7q2qjwv7cfyv7ri3ai42"; depends=[sm]; };
1207   clusterExperiment = derive2 { name="clusterExperiment"; version="2.16.0"; sha256="1xd2kxmdg51hhj0zvz7pxmpdvb1sya7prsf9ny2wj2y8ivrqgn4f"; depends=[ape BiocGenerics BiocSingular cluster DelayedArray edgeR HDF5Array howmany kernlab limma locfdr Matrix matrixStats mbkmeans NMF phylobase pracma RColorBrewer Rcpp S4Vectors scales SingleCellExperiment stringr SummarizedExperiment zinbwave]; };
1208   clusterProfiler = derive2 { name="clusterProfiler"; version="4.4.4"; sha256="0k5jhry0j6wa7779n3hrw4ld4bvyahpgpbwi2a0g704m3dd3mqp5"; depends=[AnnotationDbi DOSE downloader dplyr enrichplot GO_db GOSemSim magrittr plyr qvalue rlang tidyr yulab_utils]; };
1209   clusterSeq = derive2 { name="clusterSeq"; version="1.20.0"; sha256="0rh9ql3f1z79hxwlnsv5r8l0cpqyr6jxlz38f1aakshdlwdxlkiq"; depends=[baySeq BiocGenerics BiocParallel]; };
1210   clusterStab = derive2 { name="clusterStab"; version="1.68.0"; sha256="0p5dk9s3zrd5d2ap5i445jlkhjp7f8vh3dj3h59wya2n4phpigb4"; depends=[Biobase]; };
1211   clustifyr = derive2 { name="clustifyr"; version="1.8.0"; sha256="1c1lbgsmwafg9aa8j95x235270axp1g7mq41hmidc9mf4f6vclxc"; depends=[cowplot dplyr entropy fgsea ggplot2 httr Matrix matrixStats proxy readr rlang S4Vectors scales SingleCellExperiment stringr SummarizedExperiment tibble tidyr]; };
1212   cmapR = derive2 { name="cmapR"; version="1.8.0"; sha256="0hh9if8zhb4nfh2l76fjj364kcp0km78qlb0i67xlhj8py27bhij"; depends=[data_table flowCore matrixStats rhdf5 SummarizedExperiment]; };
1213   cn_farms = derive2 { name="cn.farms"; version="1.44.0"; sha256="1dy0hd55h8ly4j4n713wal655j6p1sfpnhswczhn3k2xkzykb974"; depends=[affxparser Biobase DBI DNAcopy ff lattice oligo oligoClasses preprocessCore snow]; };
1214   cn_mops = derive2 { name="cn.mops"; version="1.42.0"; sha256="152l9nnncyyz182cnafw8ipy94jf7mizhr6xmvp3l4qj9yixr0y5"; depends=[Biobase BiocGenerics exomeCopy GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; };
1215   cnvGSA = derive2 { name="cnvGSA"; version="1.40.0"; sha256="0wvkn62i4g3r5fg7am6mmwri01gr5g5dil5mp5w4na57h1svsksc"; depends=[brglm doParallel foreach GenomicRanges splitstackshape]; };
1216   coGPS = derive2 { name="coGPS"; version="1.40.0"; sha256="1211fvcf6li32575p8638a6hf4a6bqqkx4jyfb8hpymhj5d4z5lx"; depends=[]; };
1217   coMET = derive2 { name="coMET"; version="1.28.0"; sha256="03b7a1b0g3zrh34ifjrylqdd1yi033lda6q71mir6plqr9y7fva1"; depends=[biomaRt corrplot GenomicRanges gridExtra Gviz hash IRanges psych rtracklayer S4Vectors]; };
1218   coMethDMR = derive2 { name="coMethDMR"; version="1.0.0"; sha256="0n89jv29mqrc2qjn7fv7zcn1ycsfrlsfs5ps1yiw5p77mq2rapp4"; depends=[AnnotationHub BiocParallel bumphunter ExperimentHub GenomicRanges IRanges lmerTest]; };
1219   coRdon = derive2 { name="coRdon"; version="1.14.0"; sha256="1kiw6kbbwqmr89mzppmgral0zxd5shmp53xyvbcr26fxs0xn1np2"; depends=[Biobase Biostrings data_table dplyr ggplot2 purrr stringr]; };
1220   codelink = derive2 { name="codelink"; version="1.64.0"; sha256="0r1srzx7z2833yvbnmdmbpkhy7irs4hdy2901bzqcwp91b4n6q75"; depends=[annotate Biobase BiocGenerics limma]; };
1221   cogena = derive2 { name="cogena"; version="1.30.0"; sha256="0xibcmnbaxsgq06wmh45263gp2f8m9llk2v5m2n1qlvcykyr7vwr"; depends=[amap apcluster Biobase biwt class cluster corrplot devtools doParallel dplyr fastcluster foreach ggplot2 gplots kohonen mclust reshape2 stringr tibble tidyr]; };
1222   cogeqc = derive2 { name="cogeqc"; version="1.0.7"; sha256="1dxywmwn0wsfvhpsyvrrav33bf4d0lszrll1f83514ycc9xvzqby"; depends=[Biostrings ggplot2 ggtree igraph patchwork reshape2]; };
1223   cola = derive2 { name="cola"; version="2.2.0"; sha256="1940aqpqnb31kkypnhrrp7lbsv70bxcqkcrjgjmc1ag58148mnka"; depends=[BiocGenerics brew circlize clue cluster ComplexHeatmap crayon digest doParallel eulerr foreach GetoptLong GlobalOptions httr impute irlba knitr markdown matrixStats mclust microbenchmark png RColorBrewer Rcpp skmeans xml2]; };
1224   comapr = derive2 { name="comapr"; version="1.0.0"; sha256="1m8jzgnkghwn7ci8jqr7zs4sj6lisnxri0wiw92m1vz9zibz3w5q"; depends=[BiocParallel circlize dplyr foreach GenomeInfoDb GenomicRanges ggplot2 gridExtra Gviz IRanges Matrix plotly plyr RColorBrewer reshape2 rlang S4Vectors scales SummarizedExperiment tidyr]; };
1225   combi = derive2 { name="combi"; version="1.8.0"; sha256="12rv2ic1y4ab4mj5jlrfgph9fbm44sqla8kqsjn2fwfw2zfzyfq4"; depends=[alabama BB Biobase cobs DBI ggplot2 limma Matrix nleqslv phyloseq reshape2 SummarizedExperiment tensor vegan]; };
1226   compEpiTools = derive2 { name="compEpiTools"; version="1.30.0"; sha256="1b7aasmm56ckfhb8b6im0p6yvlbn6njmn2jyvc8n1x0bxrpy3nv3"; depends=[AnnotationDbi BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges GO_db gplots IRanges methylPipe Rsamtools S4Vectors topGO XVector]; };
1227   compartmap = derive2 { name="compartmap"; version="1.14.0"; sha256="0iq19ca8jmdviacrm5aw6bicgnrkc84s1ywva8mc7lgwnc2fjrnw"; depends=[BiocSingular DelayedArray DelayedMatrixStats GenomicRanges ggplot2 HDF5Array Matrix RaggedExperiment reshape2 RMTstat rtracklayer scales SummarizedExperiment]; };
1228   compcodeR = derive2 { name="compcodeR"; version="1.32.1"; sha256="09jc7h0i5821piga3prqkhzk8zp29iac7r9z9m2rxlsv7lk2ynnk"; depends=[ape caTools edgeR ggplot2 gplots gtools KernSmooth knitr lattice limma markdown MASS matrixStats modeest phylolm ROCR sm stringr vioplot]; };
1229   conclus = derive2 { name="conclus"; version="1.3.3"; sha256="1lgr0k1wf6a0dn4zvb6hpknr3dh10r3v81l3zlwnyfii5bnpi4a6"; depends=[AnnotationDbi Biobase BiocFileCache biomaRt clusterProfiler dbscan doParallel dplyr factoextra foreach fpc GEOquery ggplot2 gridExtra org_Hs_eg_db org_Mm_eg_db pheatmap rlang Rtsne scales scater scran SingleCellExperiment stringr SummarizedExperiment]; };
1230   condiments = derive2 { name="condiments"; version="1.4.0"; sha256="15b6zpj9ivj8i2rykd39ywmb8gyllgfkbmswrjb5jhkinqcj53lf"; depends=[BiocParallel distinct dplyr Ecume igraph magrittr matrixStats mgcv pbapply RANN SingleCellExperiment slingshot SummarizedExperiment TrajectoryUtils]; };
1231   consensus = derive2 { name="consensus"; version="1.14.0"; sha256="0hw9z5mqgnb0zy9sx5w96zsnnzywmlg7pqvvbs6lk33wyi7q42k6"; depends=[gplots matrixStats RColorBrewer]; };
1232   consensusDE = derive2 { name="consensusDE"; version="1.14.0"; sha256="1vgkvqxybpnw0sifp3lxvg9fd0y93p5x5xx7acay0mlg1vnbs3hp"; depends=[airway AnnotationDbi Biobase BiocGenerics BiocParallel Biostrings data_table dendextend DESeq2 EDASeq edgeR EnsDb_Hsapiens_v86 ensembldb GenomicAlignments GenomicFeatures limma org_Hs_eg_db pcaMethods RColorBrewer Rsamtools RUVSeq S4Vectors SummarizedExperiment TxDb_Dmelanogaster_UCSC_dm3_ensGene]; };
1233   consensusOV = derive2 { name="consensusOV"; version="1.18.0"; sha256="0m1jw434b6pn7ymx9829nrvy1viqpl50d4mhvkpkx37qnv45qdfa"; depends=[Biobase gdata genefu GSVA limma matrixStats randomForest]; };
1234   consensusSeekeR = derive2 { name="consensusSeekeR"; version="1.24.0"; sha256="1nc1ylr7mkj6bgxhyccxrvp3ybndr185c7ah9d3msvzp17497r13"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges IRanges rtracklayer S4Vectors stringr]; };
1235   contiBAIT = derive2 { name="contiBAIT"; version="1.24.0"; sha256="19spydvgkypf695lb8pvhslf8sv340ancz5hdhvmfdb1ghhb62lk"; depends=[BH BiocGenerics BiocParallel clue cluster colorspace data_table diagram DNAcopy exomeCopy GenomicAlignments GenomicFiles GenomicRanges ggplot2 gplots gtools IRanges Rcpp reshape2 Rsamtools rtracklayer S4Vectors TSP]; };
1236   conumee = derive2 { name="conumee"; version="1.30.0"; sha256="1pzg6vvzskxdfkwwshqa0vi498vi9341bkc5dinihm8qvjn2h268"; depends=[DNAcopy GenomeInfoDb GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest IRanges minfi rtracklayer]; };
1237   convert = derive2 { name="convert"; version="1.72.0"; sha256="0xj4k82q9547cls3dcs2wnlk6ssvcgawynsbmry9kqmjrl44ng20"; depends=[Biobase limma marray]; };
1238   copa = derive2 { name="copa"; version="1.64.0"; sha256="09g05jy46mq570dm0hs65j5axqswkyf0an68aqhl8g8kw0nq888j"; depends=[Biobase]; };
1239   copynumber = derive2 { name="copynumber"; version="1.36.0"; sha256="1gr8q9ri49x8qlmbsi6k6wcak1w9v48wr1qy7axc86brzx6z6mhd"; depends=[BiocGenerics GenomicRanges IRanges S4Vectors]; };
1240   corral = derive2 { name="corral"; version="1.6.0"; sha256="028av863qqqgvkcsnl5180h7ryxx0xs5ya0zpj04a80vlcb0ikbz"; depends=[ggplot2 ggthemes gridExtra irlba Matrix MultiAssayExperiment pals reshape2 SingleCellExperiment SummarizedExperiment transport]; };
1241   coseq = derive2 { name="coseq"; version="1.20.0"; sha256="02w3s64d186qhivd2a6adxi8jwdxd5cs0mpbfrijiyxd37allhpx"; depends=[BiocParallel capushe compositions corrplot DESeq2 e1071 edgeR ggplot2 HTSCluster HTSFilter mvtnorm Rmixmod S4Vectors scales SummarizedExperiment]; };
1242   cosmiq = derive2 { name="cosmiq"; version="1.30.0"; sha256="1a0lqd4lgn2qx4p8d77dcn9gnymv42iv6jyz61rzawh6vkmj6f4m"; depends=[faahKO MassSpecWavelet pracma Rcpp xcms]; };
1243   cosmosR = derive2 { name="cosmosR"; version="1.4.0"; sha256="1i2a5xajxzkk7m50vavygsnb4wadmf9qkfip90554l69ylvvafj7"; depends=[CARNIVAL dorothea dplyr GSEABase igraph progress purrr rlang stringr visNetwork]; };
1244   countsimQC = derive2 { name="countsimQC"; version="1.14.0"; sha256="0a5i0mb19ck65mqr4l695ngwj1qjapb3s7h52pn128qyywr02gla"; depends=[caTools DESeq2 dplyr DT edgeR genefilter GenomeInfoDbData ggplot2 randtests rmarkdown SummarizedExperiment tidyr]; };
1245   covEB = derive2 { name="covEB"; version="1.22.0"; sha256="0l04bsqcdb8m61mwrvq0d2gx2iz1kn2fbryxvhj5rsjrf72r6slk"; depends=[Biobase gsl igraph LaplacesDemon Matrix mvtnorm]; };
1246   covRNA = derive2 { name="covRNA"; version="1.22.0"; sha256="031vxazqss5mi5clc15iw38xgc079vd17wf53fik1fynr84g5xpi"; depends=[ade4 Biobase genefilter]; };
1247   cpvSNP = derive2 { name="cpvSNP"; version="1.28.0"; sha256="0npggmics5lng86zsg132khak4hn15sb8w8qhxl19kdxiayf9dpa"; depends=[BiocParallel corpcor GenomicFeatures ggplot2 GSEABase plyr]; };
1248   cqn = derive2 { name="cqn"; version="1.42.0"; sha256="1qipaskv2bqgc733sssalzygcbhdlnh6cxvk3w7nz3wlmjar2yqp"; depends=[mclust nor1mix preprocessCore quantreg]; };
1249   crisprBase = derive2 { name="crisprBase"; version="1.0.0"; sha256="0bcdnp56qyw2a4qmc5jkmq8cvn2n4kbmz0yavi8692myfdr35vlq"; depends=[BiocGenerics Biostrings GenomicRanges IRanges S4Vectors stringr]; };
1250   crisprBowtie = derive2 { name="crisprBowtie"; version="1.0.0"; sha256="1gdkpx81gg7m1s956n57r6bk5vi3f9qypl93762x1hr0pd03xy01"; depends=[BiocGenerics Biostrings BSgenome crisprBase GenomeInfoDb GenomicRanges IRanges Rbowtie readr stringr]; };
1251   crisprBwa = derive2 { name="crisprBwa"; version="1.0.0"; sha256="157nxk2ymjikw2madbyjxbihcdjav3gg5xmr6i5jp8jsm0m4hpjc"; depends=[BiocGenerics BSgenome crisprBase GenomeInfoDb Rbwa readr stringr]; };
1252   crisprScore = derive2 { name="crisprScore"; version="1.0.0"; sha256="19vwvjq7pw6m813saldns38y3rhg7a63f5cd5sly3qiai8qfa3bb"; depends=[basilisk BiocGenerics Biostrings crisprScoreData IRanges randomForest reticulate stringr XVector]; };
1253   crisprseekplus = derive2 { name="crisprseekplus"; version="1.22.0"; sha256="18xiwjbssyz7dphiafqza5awxb6b4g023r3lq51mggbqczhrqwfp"; depends=[AnnotationDbi BiocManager BSgenome CRISPRseek DT GenomicFeatures GenomicRanges GUIDEseq hash shiny shinyjs]; };
1254   crlmm = derive2 { name="crlmm"; version="1.54.0"; sha256="0znspkc8mvfq94687dzmzix1dnnz32nvv2pdhv9cay2q6sv3d6z5"; depends=[affyio beanplot Biobase BiocGenerics ellipse ff foreach illuminaio lattice limma matrixStats mvtnorm oligoClasses preprocessCore RcppEigen VGAM]; };
1255   crossmeta = derive2 { name="crossmeta"; version="1.22.1"; sha256="1qqbs11b5srm063igwddgnkmk65fsi7zy3ncl80q0bikn9d9dbcs"; depends=[affxparser affy AnnotationDbi Biobase BiocGenerics BiocManager data_table DBI DT edgeR fdrtool GEOquery limma matrixStats metaMA miniUI oligo RCurl reader readxl RSQLite shiny shinyBS shinyjs shinypanel shinyWidgets stringr sva tibble XML]; };
1256   csaw = derive2 { name="csaw"; version="1.30.1"; sha256="12fyrg251g0c25vff3badi3mrw6lwhlxnq1xc9q5m1mq9p6151d3"; depends=[BiocGenerics BiocParallel edgeR GenomeInfoDb GenomicRanges IRanges limma Matrix metapod Rcpp Rhtslib Rsamtools S4Vectors SummarizedExperiment zlibbioc]; };
1257   csdR = derive2 { name="csdR"; version="1.2.0"; sha256="02r3waqvv4v7pjbw2xv41y46ammlm5s04hg0pwpb327ia6pz9c1v"; depends=[glue matrixStats Rcpp RhpcBLASctl WGCNA]; };
1258   ctc = derive2 { name="ctc"; version="1.70.0"; sha256="0c9pgp25dqx12fmi4cqm7xyxjmy6g7wv9vbljgdjghaij2lrc4pb"; depends=[amap]; };
1259   ctgGEM = derive2 { name="ctgGEM"; version="1.7.0"; sha256="0hmapz96r024r3bws1wf0spd0i81viyma859y9nn93jrwxscrcdb"; depends=[Biobase BiocGenerics igraph Matrix monocle sincell SummarizedExperiment TSCAN]; };
1260   ctsGE = derive2 { name="ctsGE"; version="1.22.0"; sha256="0scqb397cx61sn9xsclg80wwjh3fvlc8a7l3fakmdmy3jc667ny8"; depends=[ccaPP ggplot2 limma reshape2 shiny stringr]; };
1261   cummeRbund = derive2 { name="cummeRbund"; version="2.38.0"; sha256="1p4anmi436zykp0ir307g75g23kj8b7shxg4r65qq6zdwflphm0q"; depends=[Biobase BiocGenerics fastcluster ggplot2 Gviz plyr reshape2 RSQLite rtracklayer S4Vectors]; };
1262   customCMPdb = derive2 { name="customCMPdb"; version="1.6.0"; sha256="1h5zpxlvnywafbssf8pk143xw5b8n7ixl1dq76msvvhgharqhl87"; depends=[AnnotationHub BiocFileCache ChemmineR rappdirs RSQLite XML]; };
1263   customProDB = derive2 { name="customProDB"; version="1.36.0"; sha256="0bypa4xww5hsby7hs7l4p1lz790d8sk0qvjvciq0ai4f7nb4gwjr"; depends=[AhoCorasickTrie AnnotationDbi biomaRt Biostrings DBI GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges plyr RCurl Rsamtools RSQLite rtracklayer S4Vectors stringr VariantAnnotation]; };
1264   cyanoFilter = derive2 { name="cyanoFilter"; version="1.4.0"; sha256="0r30q9lxc3nwz90sv6ra7y2fdj04k0q1dz2hhw979v1yjndjqr6q"; depends=[Biobase cytometree flowClust flowCore flowDensity GGally ggplot2 mrfDepth]; };
1265   cycle = derive2 { name="cycle"; version="1.50.0"; sha256="0kwn6wbxc5zd0cp9wpb7x9yaf3zcrrs1bjq83y5wp9xxj2cbmn4k"; depends=[Biobase Mfuzz]; };
1266   cydar = derive2 { name="cydar"; version="1.20.0"; sha256="07lz3smlc4lsl3r2dnjjfvpymcw8msh2695v41vnrpabij489srl"; depends=[Biobase BiocGenerics BiocNeighbors BiocParallel flowCore Rcpp S4Vectors shiny SingleCellExperiment SummarizedExperiment viridis]; };
1267   cytoKernel = derive2 { name="cytoKernel"; version="1.2.0"; sha256="1h49gmldw3bwwqsn05shsqxfwysxq5v06awn4v0dwnrxqgra0qym"; depends=[ashr BiocParallel circlize ComplexHeatmap data_table dplyr magrittr Rcpp rlang S4Vectors SummarizedExperiment]; };
1268   cytoMEM = derive2 { name="cytoMEM"; version="1.0.0"; sha256="0p822gg2r1842csyyyrxwh8pr8qa452zij8h0n5wi52wwmgdli6l"; depends=[flowCore gplots matrixStats]; };
1269   cytolib = derive2 { name="cytolib"; version="2.8.0"; sha256="18b532sicca5l8sn334prrm7g1z1cakiwydccz4i833168pnsjyg"; depends=[BH Rcpp RcppArmadillo RcppParallel Rhdf5lib RProtoBufLib]; };
1270   cytomapper = derive2 { name="cytomapper"; version="1.8.0"; sha256="1svr120n0a7mphi1nr6qds7iqj9dgdi2q0l6lfkx37dc89wd3nwr"; depends=[BiocParallel DelayedArray EBImage ggbeeswarm ggplot2 HDF5Array matrixStats nnls raster RColorBrewer rhdf5 S4Vectors shiny shinydashboard SingleCellExperiment SummarizedExperiment svglite svgPanZoom viridis]; };
1271   dStruct = derive2 { name="dStruct"; version="1.2.0"; sha256="1wxvqs09aflwfrka8aij0sxwqwzm8ma2ab06wcs778l2gki230dv"; depends=[ggplot2 IRanges purrr reshape2 rlang S4Vectors zoo]; };
1272   daMA = derive2 { name="daMA"; version="1.68.0"; sha256="1mpjvl24wsdmpgra3iasgfvy29m71318gj6j1gg6081w0n4cq72m"; depends=[MASS]; };
1273   dada2 = derive2 { name="dada2"; version="1.24.0"; sha256="0nvjnmcjh0i660y8s3rh9b3zl163wxdx7qm2n36m6vf0iy987l4x"; depends=[BiocGenerics Biostrings ggplot2 IRanges Rcpp RcppParallel reshape2 ShortRead XVector]; };
1274   dagLogo = derive2 { name="dagLogo"; version="1.34.0"; sha256="1k7a750gf0ww0s3pzxbd6ff5725321bq787z2r2lg6ysxh387f1l"; depends=[BiocGenerics biomaRt Biostrings motifStack pheatmap UniProt_ws]; };
1275   dasper = derive2 { name="dasper"; version="1.6.0"; sha256="0cv51fkmi29cnba750fkayycfgsn93wh5xll0m5rjpqz7lxzc83s"; depends=[basilisk BiocFileCache BiocParallel data_table dplyr GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggpubr ggrepel IRanges magrittr megadepth plyranges readr reticulate rtracklayer S4Vectors stringr SummarizedExperiment tidyr]; };
1276   dcGSA = derive2 { name="dcGSA"; version="1.24.0"; sha256="1p0i81bh6knkyy0d86icsa4dcdx0mahhdgcg3fyqnzn6bhwhk3bg"; depends=[BiocParallel Matrix]; };
1277   dcanr = derive2 { name="dcanr"; version="1.12.0"; sha256="0c4x3b8azcrqlkhbs7db4qh7828yx311bx1bng6wy7121asni4kz"; depends=[circlize doRNG foreach igraph Matrix plyr RColorBrewer reshape2 stringr]; };
1278   dce = derive2 { name="dce"; version="1.4.99"; sha256="140w6zf3vzi40n1gvlln88b0fk2dgyqfnjznizhsk9wnapqq3540"; depends=[assertthat dplyr edgeR epiNEM expm ggplot2 ggraph glm2 glue graph graphite harmonicmeanp igraph logger magrittr MASS Matrix metap mnem naturalsort org_Hs_eg_db pcalg ppcor purrr reshape2 Rgraphviz rlang shadowtext tidygraph tidyverse]; };
1279   ddCt = derive2 { name="ddCt"; version="1.52.0"; sha256="03vgihxh8k33vdd1g96iwy69lf9zl3rg2bn0zdnbhrj7rfiqvj3q"; depends=[Biobase BiocGenerics lattice RColorBrewer xtable]; };
1280   ddPCRclust = derive2 { name="ddPCRclust"; version="1.16.0"; sha256="0pfscgbc241if2bj1xsj56nxcd31qq0wm39daznnjk155j5bfmx4"; depends=[clue flowCore flowDensity flowPeaks ggplot2 openxlsx plotrix R_utils SamSPECTRAL]; };
1281   dearseq = derive2 { name="dearseq"; version="1.8.4"; sha256="1zsqsgf243gq1k57mw11d6apzccnq531mwg2wzw9mjrs1m0jsfzl"; depends=[CompQuadForm dplyr ggplot2 KernSmooth magrittr matrixStats patchwork pbapply reshape2 rlang statmod survey tibble viridisLite]; };
1282   debCAM = derive2 { name="debCAM"; version="1.14.0"; sha256="1ynz57kkxl8nx80zhh1vhhydqb5n6r9d7p69f0k9nj8rp4hdgng7"; depends=[apcluster Biobase BiocParallel corpcor DMwR2 geometry NMF nnls pcaPP rJava SummarizedExperiment]; };
1283   debrowser = derive2 { name="debrowser"; version="1.24.1"; sha256="064dsvy5p9dibnk77iyq9ha4dqpbnr5gfmfykzhwgnkcxli9anhd"; depends=[annotate AnnotationDbi apeglm ashr clusterProfiler colourpicker DESeq2 DOSE DT edgeR enrichplot GenomicRanges ggplot2 gplots Harman heatmaply igraph IRanges jsonlite limma org_Hs_eg_db org_Mm_eg_db pathview plotly RColorBrewer RCurl reshape2 S4Vectors shiny shinyBS shinydashboard shinyjs stringi SummarizedExperiment sva]; };
1284   deco = derive2 { name="deco"; version="1.12.0"; sha256="18n5zgln33c79jbjzjlivs8ihyg8zci6minfqlvagxgzcpa67k0m"; depends=[ade4 AnnotationDbi Biobase BiocParallel BiocStyle cluster foreign gdata ggplot2 gplots gridExtra limma locfit made4 RColorBrewer reshape2 scatterplot3d sfsmisc SummarizedExperiment]; };
1285   decompTumor2Sig = derive2 { name="decompTumor2Sig"; version="2.12.0"; sha256="04hg9bbga2s8scjxfd8wjlmr45nzzvh8d6gr0w929sybx4nj2qz6"; depends=[BiocGenerics Biostrings BSgenome_Hsapiens_UCSC_hg19 data_table GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggseqlogo gridExtra Matrix plyr quadprog readxl S4Vectors SummarizedExperiment TxDb_Hsapiens_UCSC_hg19_knownGene VariantAnnotation]; };
1286   decontam = derive2 { name="decontam"; version="1.16.0"; sha256="1g9hcfcfnpq6z21069yw0pyzncwznmvxb2xalg4y6y1604dy98q9"; depends=[ggplot2 reshape2]; };
1287   deconvR = derive2 { name="deconvR"; version="1.2.0"; sha256="091z3lncamscsvzj63zzbw7dr7vnkn0jwfkm5ljq4112w4rxgrm3"; depends=[assertthat BiocGenerics data_table dplyr e1071 foreach GenomicRanges IRanges magrittr MASS matrixStats methylKit nnls quadprog rsq S4Vectors tidyr]; };
1288   decoupleR = derive2 { name="decoupleR"; version="2.2.2"; sha256="0q1w8yw3bwx8ai5z8rw8lz97w4cplxijq93634hza2vgkig1ck9m"; depends=[broom dplyr magrittr Matrix purrr rlang stringr tibble tidyr tidyselect withr]; };
1289   deepSNV = derive2 { name="deepSNV"; version="1.42.1"; sha256="0bgj1grv3a5bqhcdsw445x49kl3pz367svy6fnrzfsk9bmj46kgn"; depends=[Biostrings GenomicRanges IRanges Rhtslib SummarizedExperiment VariantAnnotation VGAM]; };
1290   deltaCaptureC = derive2 { name="deltaCaptureC"; version="1.10.0"; sha256="1v15v7lhxaymj2940k11z5bg5zpqsgncdpc4sxw8ff89m1ilwrlk"; depends=[DESeq2 GenomicRanges ggplot2 IRanges SummarizedExperiment tictoc]; };
1291   deltaGseg = derive2 { name="deltaGseg"; version="1.36.0"; sha256="1a2p4mx88n2hrg30gkilhisjf1hbnjqqv86hcji2ypz54axx7jdv"; depends=[changepoint fBasics ggplot2 pvclust reshape scales tseries wavethresh]; };
1292   densvis = derive2 { name="densvis"; version="1.6.1"; sha256="0is5gxdd2m9qhdzkr8cs22f3kp5qjy45x9hcws01189px637pk64"; depends=[assertthat basilisk Rcpp reticulate]; };
1293   derfinder = derive2 { name="derfinder"; version="1.30.0"; sha256="1zyrfz26k8mscssfk7f0sjqgaf3xbp6ns89b4sfj2mpmf7m4m7rv"; depends=[AnnotationDbi BiocGenerics BiocParallel bumphunter derfinderHelper GenomeInfoDb GenomicAlignments GenomicFeatures GenomicFiles GenomicRanges Hmisc IRanges qvalue Rsamtools rtracklayer S4Vectors]; };
1294   derfinderHelper = derive2 { name="derfinderHelper"; version="1.30.0"; sha256="0r7zbx5bfmh5cjs12y8d9qwz53nz340gdy3sx7zcn4rzn7rpslp5"; depends=[IRanges Matrix S4Vectors]; };
1295   derfinderPlot = derive2 { name="derfinderPlot"; version="1.30.0"; sha256="0wp4bj9fccqccyz6nal2y52j88sb9llli65psnvnz2kv2m30j23p"; depends=[derfinder GenomeInfoDb GenomicFeatures GenomicRanges ggbio ggplot2 IRanges limma plyr RColorBrewer reshape2 S4Vectors scales]; };
1296   destiny = derive2 { name="destiny"; version="3.10.0"; sha256="1c85ky5ggdsi0ab1l4ipl85gc1kj1zv3wp08qrvslax3z0yw0ljy"; depends=[Biobase BiocGenerics ggplot_multistats ggplot2 ggthemes irlba knn_covertree Matrix pcaMethods proxy Rcpp RcppEigen RcppHNSW RSpectra scales scatterplot3d SingleCellExperiment smoother SummarizedExperiment tidyr tidyselect VIM]; };
1297   diffGeneAnalysis = derive2 { name="diffGeneAnalysis"; version="1.78.0"; sha256="17m2m4srjafdj2c16lrh9kp82il5pnbcfhzn3kcyb1am2yyr6whi"; depends=[minpack_lm]; };
1298   diffHic = derive2 { name="diffHic"; version="1.28.0"; sha256="1gj3691ngsxkbh9n985jnm387xgcwy943fnjwfd03ycgpl5lv5js"; depends=[BiocGenerics Biostrings BSgenome csaw edgeR GenomeInfoDb GenomicRanges InteractionSet IRanges limma locfit Rcpp rhdf5 Rhtslib Rsamtools rtracklayer S4Vectors SummarizedExperiment zlibbioc]; };
1299   diffUTR = derive2 { name="diffUTR"; version="1.4.0"; sha256="018bpkg39mgw0y67d9b2n1h0i4p0383wj1kk4jfldvh9qa3hl3n5"; depends=[ComplexHeatmap DEXSeq dplyr edgeR ensembldb GenomeInfoDb GenomicRanges ggplot2 ggrepel IRanges limma matrixStats Rsubread rtracklayer S4Vectors stringi SummarizedExperiment viridisLite]; };
1300   diffcoexp = derive2 { name="diffcoexp"; version="1.16.0"; sha256="0l9gx1bvr0s9nys8qicw04s6kp5h7dg377bmlnjylygxn4znkjdf"; depends=[BiocGenerics DiffCorr igraph psych SummarizedExperiment WGCNA]; };
1301   diffcyt = derive2 { name="diffcyt"; version="1.16.0"; sha256="0mysylzmg24g7lm1xan4yklzqmskfgh53j6vjcz2gzakz5rq3rdb"; depends=[circlize ComplexHeatmap dplyr edgeR flowCore FlowSOM limma lme4 magrittr multcomp reshape2 S4Vectors SummarizedExperiment tidyr]; };
1302   diffloop = derive2 { name="diffloop"; version="1.24.0"; sha256="0v0jg9y08xzw775x2lm82ig1ag4wjf4z2l6a66zmk6qbn59dwj1g"; depends=[Biobase biomaRt data_table dplyr edgeR foreach GenomeInfoDb GenomicRanges ggplot2 IRanges limma locfit matrixStats pbapply plyr readr reshape2 rtracklayer S4Vectors statmod Sushi]; };
1303   diffuStats = derive2 { name="diffuStats"; version="1.16.0"; sha256="0pkr77x48p3k5ahn7jfshd1zrzwqy57ynp8crh1ji0288hzrw78n"; depends=[checkmate expm igraph MASS Matrix plyr precrec Rcpp RcppArmadillo RcppParallel]; };
1304   diggit = derive2 { name="diggit"; version="1.28.0"; sha256="084nbx8sgdk3madsqgpia6jcl4fw20dzwbvphhbkws5yghf49pg8"; depends=[Biobase ks viper]; };
1305   dir_expiry = derive2 { name="dir.expiry"; version="1.4.0"; sha256="098wzm8hlpy70c99k2sl4k8z2dllhw7rwdj8dhcskr7kaw71k3sq"; depends=[filelock]; };
1306   discordant = derive2 { name="discordant"; version="1.20.0"; sha256="0896ch07zpbwif48nz9n91gzsdkf7ax68vylhlfvz5mbgdd1cc3f"; depends=[Biobase biwt dplyr gtools MASS Rcpp]; };
1307   distinct = derive2 { name="distinct"; version="1.8.0"; sha256="0g7591km80zz1jhy5d8ys9snmva79prx2v4sdm57whn93mxqyp0l"; depends=[doParallel doRNG foreach ggplot2 limma Matrix Rcpp RcppArmadillo Rfast scater SingleCellExperiment SummarizedExperiment]; };
1308   dittoSeq = derive2 { name="dittoSeq"; version="1.8.1"; sha256="0vi0hcyffaxp6yxsrq95bdlrhr85dvbqm9c7rg6a6blkfgwhlzb4"; depends=[colorspace cowplot ggplot2 ggrepel ggridges gridExtra pheatmap reshape2 S4Vectors SingleCellExperiment SummarizedExperiment]; };
1309   divergence = derive2 { name="divergence"; version="1.12.0"; sha256="0zh38cl5rsi7mx9nijhz8qrbjgfzrc4hgkcyywxady315zxfbl7y"; depends=[SummarizedExperiment]; };
1310   dks = derive2 { name="dks"; version="1.42.0"; sha256="1ljxin1c36glri7cq5mgw929gaivdakqhssdyblciy4y8qpkxa3s"; depends=[cubature]; };
1311   dmrseq = derive2 { name="dmrseq"; version="1.16.0"; sha256="1c99l62fi26bnbvpzrlsvvs722za0l5vfhddcrhzzzasabhccb4n"; depends=[AnnotationHub annotatr BiocParallel bsseq bumphunter DelayedMatrixStats GenomeInfoDb GenomicRanges ggplot2 IRanges locfit matrixStats nlme outliers RColorBrewer rtracklayer S4Vectors]; };
1312   doppelgangR = derive2 { name="doppelgangR"; version="1.24.0"; sha256="01n0xkd0fkdwiwrnd28pk08yf2n0004q7n2w87wirw65g04f56zd"; depends=[Biobase BiocParallel digest impute mnormt SummarizedExperiment sva]; };
1313   doseR = derive2 { name="doseR"; version="1.12.0"; sha256="1g793np07a9npv7vl8fwr9ijd7hbka6k101py3m99rw4wnp6dv0w"; depends=[digest edgeR lme4 matrixStats mclust RUnit S4Vectors SummarizedExperiment]; };
1314   dpeak = derive2 { name="dpeak"; version="1.8.0"; sha256="07cv8yd95diwz9aw4d4wqhb5v75rjh8rcii62x0dqb0nf6x47gcn"; depends=[BSgenome IRanges MASS Rcpp]; };
1315   drawProteins = derive2 { name="drawProteins"; version="1.16.0"; sha256="1rg0kji5rn4zp111cl09dkdd6bichrgd87kqa1623mcxa9xcn7np"; depends=[dplyr ggplot2 httr readr tidyr]; };
1316   drugTargetInteractions = derive2 { name="drugTargetInteractions"; version="1.4.1"; sha256="1i9c9c7c83z3i3ldm7qz4wmf4p8aaafakcfyfgzdafhaacxgz4y9"; depends=[AnnotationFilter BiocFileCache biomaRt dplyr ensembldb rappdirs RSQLite S4Vectors UniProt_ws]; };
1317   dupRadar = derive2 { name="dupRadar"; version="1.26.1"; sha256="0lffngmhbld8w2j1njbrk1y41iwbigm1ssac23hlq3p0djad4fxn"; depends=[KernSmooth Rsubread]; };
1318   dyebias = derive2 { name="dyebias"; version="1.56.0"; sha256="0xciqggk4vm31y9zq05iirkrhb9wy5m8pzzdjkzd4k80dvsiny30"; depends=[Biobase marray]; };
1319   easier = derive2 { name="easier"; version="1.2.2"; sha256="1l2245qcbji1cv2rzvl3sf8xailr4rr0hiw0lqafk885qdqlxg7v"; depends=[BiocParallel coin DESeq2 dorothea dplyr easierData ggplot2 ggpubr ggrepel matrixStats progeny quantiseqr reshape2 rlang ROCR rstatix]; };
1320   easyRNASeq = derive2 { name="easyRNASeq"; version="2.32.0"; sha256="1dy1prn7qjvw7kjmq5cgdd0yvpw167f9m2azg1wxn2xfrdyb5ipr"; depends=[Biobase BiocFileCache BiocGenerics BiocParallel biomaRt Biostrings edgeR GenomeInfoDb genomeIntervals GenomicAlignments GenomicRanges IRanges locfit LSD rappdirs Rsamtools S4Vectors ShortRead SummarizedExperiment]; };
1321   easyreporting = derive2 { name="easyreporting"; version="1.8.0"; sha256="1jpgaa55zqnhqla0kid200c63ghwv0apm7p1g1z5ybrfxdlfrrkv"; depends=[rlang rmarkdown shiny]; };
1322   ecolitk = derive2 { name="ecolitk"; version="1.68.0"; sha256="07dax788x8p5dxwkw24hnlzkcpy72swzxl4ynhivjwixwy248diz"; depends=[Biobase]; };
1323   edge = derive2 { name="edge"; version="2.28.1"; sha256="1yp80qc6ji11ln8zxs3g3rm6k0jh2v20sqfm5h2pqlfw3nn5yqal"; depends=[Biobase MASS qvalue snm sva]; };
1324   edgeR = derive2 { name="edgeR"; version="3.38.4"; sha256="1ww69xrg9qrmq7dix2k48j6akgn58ss3340hm7pjvzx508x1j6n6"; depends=[limma locfit Rcpp]; };
1325   eegc = derive2 { name="eegc"; version="1.22.0"; sha256="16ixc3bn5qkqy5w38428avzrd078xq5h2r8g0csms9b09hxmj65z"; depends=[AnnotationDbi clusterProfiler DESeq2 DOSE edgeR ggplot2 gplots igraph limma org_Hs_eg_db org_Mm_eg_db pheatmap R_utils S4Vectors sna wordcloud]; };
1326   eiR = derive2 { name="eiR"; version="1.36.0"; sha256="0pnv2cfdkagq31v2q7x9yfzi1q79nj76k1i0d92wzkxh8j2rnmhh"; depends=[BiocGenerics ChemmineR DBI digest RcppAnnoy RCurl RUnit snow snowfall]; };
1327   eisaR = derive2 { name="eisaR"; version="1.8.0"; sha256="1c1nmrc6xvmxk40wiwrqysvnslrfr318lypd6qbgh7h3z5n70s0w"; depends=[BiocGenerics edgeR GenomicRanges IRanges limma S4Vectors SummarizedExperiment]; };
1328   enhancerHomologSearch = derive2 { name="enhancerHomologSearch"; version="1.2.0"; sha256="06wycza921fqycwff7fbyjxp64p7lyqinjglvwgv9jk85pxm1dxp"; depends=[BiocFileCache BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges httr IRanges jsonlite Matrix motifmatchr Rcpp rtracklayer S4Vectors]; };
1329   enrichTF = derive2 { name="enrichTF"; version="1.12.0"; sha256="0fv50ma7jaqqbrzaznzvk6vza76if40f5vbxvl22s1ymk5chwk50"; depends=[BiocGenerics BSgenome clusterProfiler GenomeInfoDb GenomicRanges ggplot2 ggpubr heatmap3 IRanges JASPAR2018 magrittr motifmatchr pipeFrame R_utils rmarkdown rtracklayer S4Vectors TFBSTools]; };
1330   enrichplot = derive2 { name="enrichplot"; version="1.16.2"; sha256="0qh7bci3rn6y2fl45izrdb62jcm6j0zxxg4pyp4mvvgjvka5lnss"; depends=[aplot DOSE ggplot2 ggraph ggtree GOSemSim igraph magrittr plyr purrr RColorBrewer reshape2 scatterpie shadowtext yulab_utils]; };
1331   ensemblVEP = derive2 { name="ensemblVEP"; version="1.38.0"; sha256="1xllmsdxz0v0fg62piwxh2r96k1s4fykkznpn6dzqg749x1nzb68"; depends=[BiocGenerics Biostrings GenomeInfoDb GenomicRanges S4Vectors SummarizedExperiment VariantAnnotation]; };
1332   ensembldb = derive2 { name="ensembldb"; version="2.20.2"; sha256="12n21dcimdhgyjzk33m6xbv0m9ihgyzcf66vr1jr5ycv3rq2s7xc"; depends=[AnnotationDbi AnnotationFilter Biobase BiocGenerics Biostrings curl DBI GenomeInfoDb GenomicFeatures GenomicRanges IRanges ProtGenerics Rsamtools RSQLite rtracklayer S4Vectors]; };
1333   epiNEM = derive2 { name="epiNEM"; version="1.20.0"; sha256="1bi0pjmdvlvfjvl6m6r7hd3bd6jdh18i3bnk3s6vpnb52hi35a07"; depends=[BoolNet e1071 graph gtools igraph latex2exp lattice latticeExtra minet mnem pcalg RColorBrewer]; };
1334   epialleleR = derive2 { name="epialleleR"; version="1.4.0"; sha256="0qw2wvrbfin2l80id06pr779l1mkvlafadkl3ja4s4nmn2ip5yfn"; depends=[BH BiocGenerics data_table GenomeInfoDb GenomicRanges Rcpp Rhtslib stringi SummarizedExperiment VariantAnnotation zlibbioc]; };
1335   epidecodeR = derive2 { name="epidecodeR"; version="1.4.0"; sha256="1fingfn0rbygvlhkgva6999sw4xc8g7k6w8nm86vw3dz5c77mq5f"; depends=[dplyr EnvStats GenomicRanges ggplot2 ggpubr IRanges rstatix rtracklayer]; };
1336   epigenomix = derive2 { name="epigenomix"; version="1.36.0"; sha256="15drlib696rylc4952rjnxrc0hfn5nskap93sz6f98b9v1g9gsmk"; depends=[beadarray Biobase BiocGenerics GenomeInfoDb GenomicRanges IRanges MCMCpack Rsamtools S4Vectors SummarizedExperiment]; };
1337   epigraHMM = derive2 { name="epigraHMM"; version="1.4.0"; sha256="13cfc86yz7wvjm3mqnmmcqq0q01w35s4vwzjhvrkwck1yn4kkpf4"; depends=[bamsignals csaw data_table GenomeInfoDb GenomicRanges ggplot2 ggpubr GreyListChIP IRanges limma magrittr MASS Matrix pheatmap Rcpp RcppArmadillo rhdf5 Rhdf5lib Rsamtools rtracklayer S4Vectors scales SummarizedExperiment]; };
1338   epihet = derive2 { name="epihet"; version="1.12.0"; sha256="0v002h96b4p2sb30iszcvfvnzqm5dnw8klypmd0496zcr7dqk8jk"; depends=[data_table doParallel foreach GenomicRanges ggplot2 igraph IRanges pheatmap qvalue ReactomePA Rtsne S4Vectors WGCNA]; };
1339   epimutacions = derive2 { name="epimutacions"; version="1.0.3"; sha256="1ga5z7w5gimzzf0zhqv3ina7vhjkas0pngjmjxpgmpk4c5z6v76j"; depends=[BiocGenerics BiocParallel biomaRt bumphunter epimutacionsData GenomicFeatures GenomicRanges ggplot2 IRanges isotree matrixStats minfi robustbase S4Vectors SummarizedExperiment]; };
1340   epistack = derive2 { name="epistack"; version="1.2.0"; sha256="0vlxdl99y1hl6pzsc55khgw5r102vvlfqlm2d7z21vnvxr4dwijr"; depends=[BiocGenerics GenomicRanges IRanges plotrix S4Vectors SummarizedExperiment viridisLite]; };
1341   epivizr = derive2 { name="epivizr"; version="2.26.0"; sha256="1hzhx062qwfzg2fr61zzsnfzzkyn3z0i5b1pdxc99ba32qx1bphz"; depends=[bumphunter epivizrData epivizrServer GenomeInfoDb GenomicRanges IRanges S4Vectors]; };
1342   epivizrChart = derive2 { name="epivizrChart"; version="1.18.0"; sha256="0pyyypp75nbbxqcsid50r16qdhj280snl4jwbxqfjnqiyjh7wsrm"; depends=[BiocGenerics epivizrData epivizrServer htmltools rjson]; };
1343   epivizrData = derive2 { name="epivizrData"; version="1.24.0"; sha256="0givnx3if0jrxaflrz89g0qfzd9vnbm4dxc9mkyi06z8nbnhvwd0"; depends=[Biobase ensembldb epivizrServer GenomeInfoDb GenomicFeatures GenomicRanges IRanges OrganismDbi S4Vectors SummarizedExperiment]; };
1344   epivizrServer = derive2 { name="epivizrServer"; version="1.24.0"; sha256="0qs9l270pbpgrc1fim1spylbncgjkjrkd2mv2xvq7bvfc2h52wqk"; depends=[httpuv mime R6 rjson]; };
1345   epivizrStandalone = derive2 { name="epivizrStandalone"; version="1.24.0"; sha256="1i8s27sw7dpsd6cmpfchc4qby34jbyqabdm0xplva89jfjn40gda"; depends=[BiocGenerics epivizr epivizrServer GenomeInfoDb GenomicFeatures git2r S4Vectors]; };
1346   erccdashboard = derive2 { name="erccdashboard"; version="1.30.0"; sha256="1nnxp34cj9zgk0bspq92jx9hi33777wdcvw3acykq9vy536ndi80"; depends=[edgeR ggplot2 gplots gridExtra gtools limma locfit MASS plyr qvalue reshape2 ROCR scales stringr]; };
1347   erma = derive2 { name="erma"; version="1.12.0"; sha256="1ilq01cr2ipxpmp422fikiz6nj4nasjhj0ikcagjn2zmmarpgi1b"; depends=[AnnotationDbi Biobase BiocGenerics BiocParallel GenomeInfoDb GenomicFiles GenomicRanges ggplot2 Homo_sapiens IRanges rtracklayer S4Vectors shiny SummarizedExperiment]; };
1348   esATAC = derive2 { name="esATAC"; version="1.18.0"; sha256="043r0mh4m26bx1r07alvidhl4bs8hxz5cmpkj6inl3q7xcv5wx0b"; depends=[AnnotationDbi BiocGenerics BiocManager Biostrings BSgenome ChIPseeker clusterProfiler corrplot digest GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 igraph IRanges JASPAR2018 knitr magrittr motifmatchr pipeFrame R_utils Rbowtie2 Rcpp rJava rmarkdown Rsamtools rtracklayer S4Vectors ShortRead TFBSTools VennDiagram]; };
1349   escape = derive2 { name="escape"; version="1.6.0"; sha256="0llvja5aaqybr3ksyl7f1qjga0ax920y5mgnc5qbqbgzn02zh1fg"; depends=[BiocParallel broom data_table dplyr ggplot2 ggridges GSEABase GSVA Matrix MatrixGenerics msigdbr patchwork reshape2 rlang SingleCellExperiment stringr SummarizedExperiment UCell]; };
1350   esetVis = derive2 { name="esetVis"; version="1.22.0"; sha256="1nsh1hybcjf8gc79zzsbjjfr6l40l4n5jrnhrx6my35fmfn1c482"; depends=[Biobase hexbin MASS MLP mpm Rtsne]; };
1351   eudysbiome = derive2 { name="eudysbiome"; version="1.26.0"; sha256="1pmk1x221hpds68yq2izwrfmvwd6v0gi0r40ggnlc9zrpx2s9fpm"; depends=[Biostrings plyr R_utils Rsamtools]; };
1352   evaluomeR = derive2 { name="evaluomeR"; version="1.12.0"; sha256="0wvha5ppx937b6qhxf95j0bwav07gq1bs2hw2q487mssksd7s1r2"; depends=[class cluster corrplot flexmix fpc ggdendro ggplot2 kableExtra MASS matrixStats mclust MultiAssayExperiment plotrix prabclus randomForest Rdpack reshape2 SummarizedExperiment]; };
1353   exomeCopy = derive2 { name="exomeCopy"; version="1.42.0"; sha256="0wfigjicbz22dijibbcz38j7javlj891q2f9mgwjpg6pwb0xi178"; depends=[GenomeInfoDb GenomicRanges IRanges Rsamtools]; };
1354   exomePeak2 = derive2 { name="exomePeak2"; version="1.8.1"; sha256="1vr5sijfddzss96zw560i46dgjw5jwrmi5dbgqjvbrrrr371sbk2"; depends=[BiocGenerics BiocParallel Biostrings BSgenome DESeq2 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges magrittr mclust Rsamtools rtracklayer S4Vectors speedglm SummarizedExperiment]; };
1355   extraChIPs = derive2 { name="extraChIPs"; version="1.0.4"; sha256="1b6kfs0lngvl6wy6a5d5qavls8jakbkjhyq7acrjgqnd94cqndr5"; depends=[BiocIO BiocParallel broom ComplexUpset csaw dplyr edgeR EnrichedHeatmap forcats GenomeInfoDb GenomicInteractions GenomicRanges ggforce ggplot2 ggrepel ggside glue Gviz InteractionSet IRanges limma RColorBrewer rlang Rsamtools rtracklayer S4Vectors scales stringr SummarizedExperiment tibble tidyr tidyselect vctrs VennDiagram]; };
1356   fCCAC = derive2 { name="fCCAC"; version="1.22.0"; sha256="1dn8srjg505725l3arx3cajd2zf0lipq9sqhqrym7km4vlpj58qn"; depends=[ComplexHeatmap fda genomation GenomicRanges ggplot2 IRanges RColorBrewer S4Vectors]; };
1357   fCI = derive2 { name="fCI"; version="1.26.0"; sha256="17gdknml04m18ds0yjik8h8c778r0jqpd182yhzfzq2gldngnaya"; depends=[FNN gtools psych rgl VennDiagram zoo]; };
1358   fabia = derive2 { name="fabia"; version="2.42.0"; sha256="04apwymadah5vidbyg0ayp1lx6955c2626zgb6lhj6jhkhzqqxdv"; depends=[Biobase]; };
1359   factDesign = derive2 { name="factDesign"; version="1.72.0"; sha256="0q6bd3fv6s3br19wivaf2qpcxafw244nvipxixp8ss7a4zgn4qf7"; depends=[Biobase]; };
1360   famat = derive2 { name="famat"; version="1.6.6"; sha256="1fj4j3i632dysj5mj03dlbhjs7zmyrh485z5sqdxkj5cr3gjiw24"; depends=[BiasedUrn clusterProfiler dplyr DT GO_db gprofiler2 KEGGREST magrittr mgcv ontologyIndex org_Hs_eg_db plotly reactome_db rWikiPathways shiny shinyBS shinydashboard stringr tidyr]; };
1361   farms = derive2 { name="farms"; version="1.48.0"; sha256="1mnmgd846ayjx1g31pwk186pq6pv0sdq114axpq41728ai3v347c"; depends=[affy Biobase MASS]; };
1362   fastLiquidAssociation = derive2 { name="fastLiquidAssociation"; version="1.32.0"; sha256="0q6zx6kwgv3lzl2gi8f6c9yzc6vl7kafjfbqnaa7q3a2h26dw9y4"; depends=[doParallel Hmisc impute LiquidAssociation preprocessCore WGCNA]; };
1363   fastreeR = derive2 { name="fastreeR"; version="1.0.0"; sha256="1skqg527nfpwknyj9k369l4qkzdm02dn262g8v3m4y75i9dw9s58"; depends=[ape data_table dynamicTreeCut R_utils rJava stringr]; };
1364   fastseg = derive2 { name="fastseg"; version="1.42.0"; sha256="1cr1b1jbgp1z1zpf71kl7mljbm2jpi6b97bf3bll3gnagfm489hy"; depends=[Biobase BiocGenerics GenomicRanges IRanges S4Vectors]; };
1365   fcScan = derive2 { name="fcScan"; version="1.10.0"; sha256="0yv7ifw0xxx1v9z8dxszv0cb72q3frd74dyxfbvrcs6x9y9v3jzp"; depends=[doParallel foreach GenomicRanges IRanges plyr rtracklayer SummarizedExperiment VariantAnnotation]; };
1366   fcoex = derive2 { name="fcoex"; version="1.10.0"; sha256="0rkxxf71c5w4pfbzndp7mvq5aqz6qab4msb8xafhf1qakm4gc66m"; depends=[clusterProfiler data_table dplyr FCBF ggplot2 ggrepel igraph intergraph Matrix network pathwayPCA progress scales SingleCellExperiment sna stringr]; };
1367   fdrame = derive2 { name="fdrame"; version="1.68.0"; sha256="0a0vlji2knqkqa6waf6jcvvkhddn3gni0nnzwyhl1b48spqsim5l"; depends=[]; };
1368   fedup = derive2 { name="fedup"; version="1.4.0"; sha256="1qf9mf9zzli1l8m47slzxpb6j5gwn5khjgvw0abmw5y3m82r2fiq"; depends=[data_table dplyr forcats ggplot2 ggthemes openxlsx RColorBrewer RCy3 tibble]; };
1369   ffpe = derive2 { name="ffpe"; version="1.40.0"; sha256="034w4q9rgzad5mhk1vjpsgdzcp3snh9bk322gc581sls17502wdb"; depends=[affy Biobase BiocGenerics lumi methylumi sfsmisc TTR]; };
1370   fgga = derive2 { name="fgga"; version="1.4.0"; sha256="0m2vr8ny5m635ycsk819l65ppfwlyymb5vkzma0w0f25z328cg2b"; depends=[BiocFileCache curl e1071 graph gRbase jsonlite RBGL]; };
1371   fgsea = derive2 { name="fgsea"; version="1.22.0"; sha256="0innyggai6l4fpl4qrblzdc52vqw9jaszmip0yr1lv7rzwyl6mpg"; depends=[BH BiocParallel data_table fastmatch ggplot2 gridExtra Matrix Rcpp]; };
1372   fishpond = derive2 { name="fishpond"; version="2.2.0"; sha256="0svp4yh0srhzbbxy1grchzdd9yzchadjp3d2sy2n9xpwxzpkhrym"; depends=[abind GenomicRanges gtools IRanges jsonlite Matrix matrixStats qvalue Rcpp S4Vectors SingleCellExperiment SummarizedExperiment svMisc]; };
1373   flagme = derive2 { name="flagme"; version="1.52.0"; sha256="147m79v00gfk4fqjy9skacscnfyslxz0i9y4g7a5vwxz3mrrzidc"; depends=[CAMERA gcspikelite gplots MASS SparseM xcms]; };
1374   flowAI = derive2 { name="flowAI"; version="1.26.0"; sha256="19964p0gni9x61fx24alb713dqyqd816l8s6azm6q0v89y15rqzl"; depends=[changepoint flowCore ggplot2 knitr plyr RColorBrewer reshape2 rmarkdown scales]; };
1375   flowBeads = derive2 { name="flowBeads"; version="1.34.0"; sha256="1nn19kv3z0pv3hbvazp1x1lmm8rjw392q4d74rsz1hfwz0vj9j97"; depends=[Biobase flowCore knitr rrcov xtable]; };
1376   flowBin = derive2 { name="flowBin"; version="1.32.0"; sha256="10h7jhadmr1l8qw94fsxcrq581ir9136w91ah84c95m7297nr5r8"; depends=[BiocGenerics class flowCore flowFP limma snow]; };
1377   flowCHIC = derive2 { name="flowCHIC"; version="1.30.0"; sha256="0zj76ymr6cs27pg0k9gwzr67y5c3iav40fs4rjcjsi26bv5vxpsy"; depends=[EBImage flowCore ggplot2 hexbin vegan]; };
1378   flowCL = derive2 { name="flowCL"; version="1.34.0"; sha256="05dcxl99sw6d1ngq3wl61y1knmyrf4l9b7nrfmcbigb1isxgjy26"; depends=[graph Rgraphviz]; };
1379   flowClean = derive2 { name="flowClean"; version="1.34.1"; sha256="0zqgccbfqm6hpi07i5nq5gd626imb6w5xkfb6q8pc0nkkz48mrfh"; depends=[bit changepoint flowCore sfsmisc]; };
1380   flowClust = derive2 { name="flowClust"; version="3.34.0"; sha256="055vm9s8aha92znhpjqkipzprw8bkrinwjaik4ygmhym7w6vbblk"; depends=[Biobase BiocGenerics flowCore graph]; };
1381   flowCore = derive2 { name="flowCore"; version="2.8.0"; sha256="17nci6rc4i0vs0ibw5q8zy30ap7q4550qpq4ifkbblqbyzxlzkhr"; depends=[BH Biobase BiocGenerics cytolib matrixStats Rcpp RcppArmadillo RProtoBufLib S4Vectors]; };
1382   flowCut = derive2 { name="flowCut"; version="1.6.0"; sha256="0p8mgx1q3hw9pfhg41mv9pigx0rakvhsdx5f3dlsqdv2ll85gi98"; depends=[Cairo e1071 flowCore flowDensity]; };
1383   flowCyBar = derive2 { name="flowCyBar"; version="1.32.0"; sha256="0hrccry4a5m3gg9zkawvhhlr4a3062vrq50gg5c48s0jvdng03hx"; depends=[gplots vegan]; };
1384   flowDensity = derive2 { name="flowDensity"; version="1.30.0"; sha256="0g8h43w9cb8l8dz14lahxqgy7ras48dl06c38b8j9bpissav68f3"; depends=[car flowCore flowViz flowWorkspace gplots RFOC rgeos sp]; };
1385   flowFP = derive2 { name="flowFP"; version="1.54.0"; sha256="0hmlajm6vdzrx3vmhi4wv4l0qszqc7z18ls361zrk1679nyxa4ms"; depends=[Biobase BiocGenerics flowCore flowViz]; };
1386   flowGraph = derive2 { name="flowGraph"; version="1.4.0"; sha256="0im9mjyynfl7yda6xcwbzai42p2q0q3g0f0j82hh044lidhpc14d"; depends=[data_table effsize furrr future ggiraph ggplot2 ggrepel gridExtra htmlwidgets igraph Matrix matrixStats purrr Rdpack stringi stringr visNetwork]; };
1387   flowMap = derive2 { name="flowMap"; version="1.34.0"; sha256="1yiw3fs850yi712bcx5j1v8sh0yavqzr0hnlxjbx6rpfp9wnrs5a"; depends=[abind ade4 doParallel Matrix reshape2 scales]; };
1388   flowMatch = derive2 { name="flowMatch"; version="1.32.0"; sha256="095azgkvjc5h4ycjgdw846gn4qizw29xmk4l5mqir4yvnlhxzaw9"; depends=[Biobase flowCore Rcpp]; };
1389   flowMeans = derive2 { name="flowMeans"; version="1.56.0"; sha256="1n4li43ydwwf5gvgmdml4ba28cxymybg5wnz6jvp35n959fwxv6y"; depends=[Biobase feature flowCore rrcov]; };
1390   flowMerge = derive2 { name="flowMerge"; version="2.44.0"; sha256="00sypimyhjgy44jh0ba200by79kgypm7yyqy7hr7y80rzxgkn55s"; depends=[feature flowClust flowCore foreach graph Rgraphviz rrcov snow]; };
1391   flowPeaks = derive2 { name="flowPeaks"; version="1.42.0"; sha256="1a35ss0szgscfkvqvpdvvb9vgclhml27ggj7rpw4ndkl0m61565f"; depends=[]; };
1392   flowPloidy = derive2 { name="flowPloidy"; version="1.22.0"; sha256="0v5yci4zlf94wf0zgzdbmmlx0hcx5rz2d1dzmb0w8b6sckfvi3b6"; depends=[car caTools flowCore knitr minpack_lm rmarkdown shiny]; };
1393   flowPlots = derive2 { name="flowPlots"; version="1.44.0"; sha256="0z38qvn2hd4ar17g8vp8fyj595nsys3yhb0m3fvv24mh48vasp4y"; depends=[]; };
1394   flowSpecs = derive2 { name="flowSpecs"; version="1.10.0"; sha256="1kjcphza5prrzc52aavshyshs2ck0spayp5jvrgk26a2dpk6xqhk"; depends=[Biobase BiocGenerics BiocParallel flowCore ggplot2 hexbin reshape2 zoo]; };
1395   flowStats = derive2 { name="flowStats"; version="4.8.2"; sha256="1x01gg5ifxh3wp0cp5a23lr9v6l9q5qg8145q2pgn904jkx5wldc"; depends=[Biobase BiocGenerics cluster corpcor fda flowCore flowViz flowWorkspace KernSmooth ks lattice MASS mnormt ncdfFlow RColorBrewer rrcov]; };
1396   flowTime = derive2 { name="flowTime"; version="1.20.0"; sha256="1vv6s87brnfrs52s8rspq1xrs6ymq6gcb78ci7dvjj26y3p8pkfn"; depends=[dplyr flowCore magrittr plyr rlang tibble]; };
1397   flowTrans = derive2 { name="flowTrans"; version="1.48.0"; sha256="03amxbhfi3fkk9ip16bvdfnlqzi1by2xywcm8bd9ndimpqq12y8s"; depends=[flowClust flowCore flowViz]; };
1398   flowUtils = derive2 { name="flowUtils"; version="1.59.0"; sha256="11x362dqb9mjlsbq6g1qkb8hhnkvm22z5s3wkgmpyy9kyifjkm26"; depends=[Biobase corpcor flowCore graph RUnit XML]; };
1399   flowVS = derive2 { name="flowVS"; version="1.28.0"; sha256="1fhfmwh7ji3n823zl410zcgz0nmjmbc0awl3149vvl2s0p93jj2d"; depends=[flowCore flowStats flowViz]; };
1400   flowViz = derive2 { name="flowViz"; version="1.60.2"; sha256="08rwzc26jns0wwjsqqmf60bpxsckr5x8skdn9iwl8grp81npcc95"; depends=[Biobase flowCore hexbin IDPmisc KernSmooth lattice latticeExtra MASS RColorBrewer]; };
1401   flowWorkspace = derive2 { name="flowWorkspace"; version="4.8.0"; sha256="0riyi9628cx1j5x6hmdd28yq75xh25j8ckcdz8dnb94dpvnhaqss"; depends=[aws_s3 aws_signature BH Biobase BiocGenerics cytolib data_table DelayedArray digest dplyr flowCore ggplot2 graph lattice latticeExtra matrixStats ncdfFlow RBGL Rcpp RcppArmadillo RcppParallel Rgraphviz Rhdf5lib RProtoBufLib S4Vectors scales XML]; };
1402   flowcatchR = derive2 { name="flowcatchR"; version="1.30.0"; sha256="1ixq18rmarg4kr6l747699b48zz6cj131zyfbmj5i28sdmbwjk1d"; depends=[abind BiocParallel colorRamps EBImage plotly shiny]; };
1403   fmcsR = derive2 { name="fmcsR"; version="1.38.0"; sha256="1mblmk21dxc9v2fikhvfg2njwgl190gkysppl6msxizwcmxsmh30"; depends=[BiocGenerics ChemmineR RUnit]; };
1404   fmrs = derive2 { name="fmrs"; version="1.6.0"; sha256="1jds04azfjdpn9pmmh0ghc274h4iqz5334gv6aq30w2m7gws35nz"; depends=[survival]; };
1405   fobitools = derive2 { name="fobitools"; version="1.4.0"; sha256="1y50xyiy02zpnvvxfp0sskgrp515m2d54nn6gqjsdv0vv8wlkvcs"; depends=[clisymbols crayon dplyr fgsea ggplot2 ggraph magrittr ontologyIndex purrr RecordLinkage stringr textclean tictoc tidygraph tidyr vroom]; };
1406   frenchFISH = derive2 { name="frenchFISH"; version="1.8.0"; sha256="12nixzdqkaxfv3jwcbf20npc9hpzkxpsm4a5znivg8ac60cw286p"; depends=[MCMCpack NHPoisson]; };
1407   frma = derive2 { name="frma"; version="1.48.0"; sha256="1w0q34jkmzqwdjxl4xrvg5nmv11n4l2qf180fwrknvp8am6nf6yx"; depends=[affy Biobase BiocGenerics DBI MASS oligo oligoClasses preprocessCore]; };
1408   frmaTools = derive2 { name="frmaTools"; version="1.48.0"; sha256="0paas86hfqkvcgv00bbgidcaps8p3gvmfy8prq4rcda4lv8i67bl"; depends=[affy Biobase DBI preprocessCore]; };
1409   funtooNorm = derive2 { name="funtooNorm"; version="1.20.0"; sha256="02wkjj2nbghwa0ybmh58hl7r2863h9nw95rsd42xzvcp9vxkpfzz"; depends=[GenomeInfoDb IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest matrixStats minfi pls]; };
1410   gCrisprTools = derive2 { name="gCrisprTools"; version="2.2.2"; sha256="023csgiik16k72jnb3322qvbrz0vl6pkmdmki29jlj1wmdfz7x6j"; depends=[Biobase ComplexHeatmap ggplot2 limma rmarkdown RobustRankAggreg SummarizedExperiment]; };
1411   gaga = derive2 { name="gaga"; version="2.42.0"; sha256="17a2a73lgmgmrkznysd23c1qbddxcsnjdma7xa0pfjwrwskcisxb"; depends=[Biobase coda EBarrays mgcv]; };
1412   gage = derive2 { name="gage"; version="2.46.1"; sha256="01y04jcy7a9fksyhj0nq37n1inkrpqf4qv117lflvipbx0dsw4gl"; depends=[AnnotationDbi GO_db graph KEGGREST]; };
1413   gaggle = derive2 { name="gaggle"; version="1.64.0"; sha256="1w2819cx7s2hazifhv8iw54jjcvzacjwcpix045ay4fa98ryg7fz"; depends=[graph rJava RUnit]; };
1414   gaia = derive2 { name="gaia"; version="2.39.0"; sha256="023mw2dy6dni7h7a1ild1y6l741kp9bmjzzfyi70jipji1jig4pa"; depends=[]; };
1415   garfield = derive2 { name="garfield"; version="1.24.0"; sha256="1dp8z778ca4pj8da9nlhm80845mv4k7njnz5q4cdy7w1bhlfcjb7"; depends=[]; };
1416   gcapc = derive2 { name="gcapc"; version="1.20.0"; sha256="18y1xs8zy76j9vbxmx7d6g3rd2mw8diib083948l4sr2ipnb9rvl"; depends=[BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS matrixStats Rsamtools S4Vectors]; };
1417   gcatest = derive2 { name="gcatest"; version="1.26.0"; sha256="1b6iscydh2c70dv2m5qdjf6zc3wbmk2jk18x00rbcxl10ckc451a"; depends=[lfa]; };
1418   gcrma = derive2 { name="gcrma"; version="2.68.0"; sha256="13a8igr2b02gsa6n3437kb33wg6h7si82fmqi35dzpfzhvx0qf6d"; depends=[affy affyio Biobase BiocManager Biostrings XVector]; };
1419   gdsfmt = derive2 { name="gdsfmt"; version="1.32.0"; sha256="1cdwyivgfc6yw5hj9b3j57wx55gckwhx6fwx2lvqynrjzjyzf3q0"; depends=[]; };
1420   geNetClassifier = derive2 { name="geNetClassifier"; version="1.36.0"; sha256="1kh7mp5h0n7yd1klcd7w4v7i3fh9pkmvgf7189wangfzbcsr4f70"; depends=[Biobase e1071 EBarrays minet]; };
1421   gemini = derive2 { name="gemini"; version="1.10.0"; sha256="0kx38b5xaksn9ikk98b60hnalnxlcb9xs3vwbwsn90cg9h94cdar"; depends=[dplyr ggplot2 magrittr mixtools pbmcapply scales]; };
1422   genArise = derive2 { name="genArise"; version="1.72.0"; sha256="0jmk7ddwvh8hy9ri6a6rfhmbaglpqq43qxh1hjdw5k4ci87l7kd3"; depends=[locfit tkrplot xtable]; };
1423   genbankr = derive2 { name="genbankr"; version="1.24.0"; sha256="141adiac75vn232cn8bp1skzn2h4ns85k3g5wq179b6y6mr4zcv6"; depends=[Biobase BiocGenerics Biostrings GenomeInfoDb GenomicFeatures GenomicRanges IRanges rtracklayer S4Vectors VariantAnnotation]; };
1424   geneAttribution = derive2 { name="geneAttribution"; version="1.22.0"; sha256="0f0nralfhzv59q9ia3mjdhdsrvi34z5mafgxb6gsb3ilbvx0yvz7"; depends=[BiocGenerics GenomeInfoDb GenomicFeatures GenomicRanges IRanges org_Hs_eg_db rtracklayer]; };
1425   geneClassifiers = derive2 { name="geneClassifiers"; version="1.20.0"; sha256="10kb03lkac3cc1pagl6az0phhw8nhmrckarshf9xqncj99rslbcw"; depends=[Biobase BiocGenerics]; };
1426   geneRecommender = derive2 { name="geneRecommender"; version="1.68.0"; sha256="1sl8mlz7nzskixjh5358wx4jvamzp5792dj2irjbfab2cr3kj8lc"; depends=[Biobase]; };
1427   geneRxCluster = derive2 { name="geneRxCluster"; version="1.32.0"; sha256="1q9l7734n2w23945x5sfi5yrvs09fq9b62y1li240amajpdqws1z"; depends=[GenomicRanges IRanges]; };
1428   geneXtendeR = derive2 { name="geneXtendeR"; version="1.22.0"; sha256="0qbhgarlr71fpg1ggxbqnj4h5n2wywl2zm95vdqr6vypplg6hjfa"; depends=[AnnotationDbi BiocStyle data_table dplyr GO_db networkD3 org_Rn_eg_db RColorBrewer rtracklayer SnowballC tm wordcloud]; };
1429   genefilter = derive2 { name="genefilter"; version="1.78.0"; sha256="1lp3alnljhsil8zylf8rvf8ik4wmsyciy3ij4rr9l4191dkkp4aq"; depends=[annotate AnnotationDbi Biobase BiocGenerics survival]; };
1430   genefu = derive2 { name="genefu"; version="2.28.0"; sha256="1a3q0qh5z5zva0d4jz521pcmig12h1hib3prbnnw1a74jxryan1i"; depends=[AIMS amap biomaRt iC10 impute limma mclust survcomp]; };
1431   geneplast = derive2 { name="geneplast"; version="1.22.0"; sha256="1k3s6ic2bawa690s641bqa3s412rk628cc55dwd3i43064ff25rc"; depends=[ape data_table igraph snow]; };
1432   geneplotter = derive2 { name="geneplotter"; version="1.74.0"; sha256="13230mzrdralnvf9jp032s16a8mk3kx5476nnvpa4pvcgp1i1ijc"; depends=[annotate AnnotationDbi Biobase BiocGenerics lattice RColorBrewer]; };
1433   genoCN = derive2 { name="genoCN"; version="1.48.0"; sha256="0646y4y2wv367gdj0cy78hddyy0h964zz5ij8v9lzs0w63a72497"; depends=[]; };
1434   genomation = derive2 { name="genomation"; version="1.28.0"; sha256="0rvay7gs4g2wi6h42kln8xwy9b05axj1x8mkfayl6pnnlva6xj79"; depends=[Biostrings BSgenome data_table GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridBase impute IRanges matrixStats plotrix plyr Rcpp readr reshape2 Rsamtools rtracklayer S4Vectors seqPattern]; };
1435   genomeIntervals = derive2 { name="genomeIntervals"; version="1.52.0"; sha256="1b2i1bdl9n1a7c9v8757w76s1aahhph6y0a7z9axanb8g8gx7bdp"; depends=[BiocGenerics GenomeInfoDb GenomicRanges intervals IRanges S4Vectors]; };
1436   genomes = derive2 { name="genomes"; version="3.26.0"; sha256="1a8cla2k3x5x3pvxahzl5vfym5dxcffggk1jwzp91qqkp6dss0jf"; depends=[curl readr]; };
1437   genomicInstability = derive2 { name="genomicInstability"; version="1.2.0"; sha256="1lx4ln867wxc2bhn24s7b4xsrb1lymq48lw6dkc4s9dm98h49y4z"; depends=[checkmate mixtools SummarizedExperiment]; };
1438   genotypeeval = derive2 { name="genotypeeval"; version="1.28.0"; sha256="13pyr82xcwzmch9w0rlzlwzis5qs9fqsy0dknn7n79jj5ws6snr6"; depends=[BiocGenerics BiocParallel GenomeInfoDb GenomicRanges ggplot2 IRanges rtracklayer VariantAnnotation]; };
1439   genphen = derive2 { name="genphen"; version="1.24.0"; sha256="1m60qagcxviix4zjzfhvrwchbjq2clss6mivb8q07bcq369yw1b8"; depends=[Biostrings doParallel e1071 foreach ranger Rcpp rPref rstan]; };
1440   gep2pep = derive2 { name="gep2pep"; version="1.16.0"; sha256="1ry5h095gg1kq9idsq94dz843ldf6jz1pyg9sryfkszzyi7ddfhh"; depends=[Biobase digest foreach GSEABase iterators repo rhdf5 XML]; };
1441   gespeR = derive2 { name="gespeR"; version="1.28.0"; sha256="0i2r79k77rkw7yhwvpzif1m0llfxv42i9inad7i46630dxpwa1bf"; depends=[Biobase biomaRt cellHTS2 doParallel dplyr foreach ggplot2 glmnet Matrix reshape2]; };
1442   getDEE2 = derive2 { name="getDEE2"; version="1.6.0"; sha256="0c2air5mra7g80y7r7qpy2hplrh2k38jj5zn4sa5a4fcpniifx7v"; depends=[htm2txt SummarizedExperiment]; };
1443   geva = derive2 { name="geva"; version="1.4.0"; sha256="0zc9zxw2bifkkiqivmg8bf8xn9sff13bih55k9nxdabsgkkwhyad"; depends=[dbscan fastcluster matrixStats]; };
1444   ggbio = derive2 { name="ggbio"; version="1.44.1"; sha256="0iyhjalwq1jmldpn20iv8l2kmz6sm20ddry2yz2zn7yq0wszp3vg"; depends=[AnnotationDbi AnnotationFilter Biobase BiocGenerics Biostrings biovizBase BSgenome ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges GGally ggplot2 gridExtra gtable Hmisc IRanges OrganismDbi reshape2 rlang Rsamtools rtracklayer S4Vectors scales SummarizedExperiment VariantAnnotation]; };
1445   ggcyto = derive2 { name="ggcyto"; version="1.24.1"; sha256="1cw60x78vqzjmgb5xd3sxyz6zwdaffp3byk34z8d4b3wkh530325"; depends=[data_table flowCore flowWorkspace ggplot2 gridExtra hexbin ncdfFlow plyr RColorBrewer rlang scales]; };
1446   ggmanh = derive2 { name="ggmanh"; version="1.0.0"; sha256="0bcdjvhablnxvakin5a4yhdpv5y5n9rqm21yz51mwjdfgz00p2mb"; depends=[gdsfmt ggplot2 ggrepel RColorBrewer rlang scales SeqArray]; };
1447   ggmsa = derive2 { name="ggmsa"; version="1.2.3"; sha256="12s6bs8b8lgcllc540dn4mjdvij2cx28l7zgnz8yzcb05dqnisbr"; depends=[aplot Biostrings dplyr ggalt ggforce ggplot2 ggtree magrittr R4RNA RColorBrewer seqmagick statebins tidyr]; };
1448   ggspavis = derive2 { name="ggspavis"; version="1.2.0"; sha256="0m0wfswz1jn7zhq527qa7q1x028zzrhg1zkw781w5p5i7ky0qzqf"; depends=[ggplot2 ggside SingleCellExperiment SpatialExperiment SummarizedExperiment]; };
1449   ggtree = derive2 { name="ggtree"; version="3.4.4"; sha256="0h1qlhn4rj7jgd9vrja7lykaglyfvnzwkghvsqj1mvp4niwli7y5"; depends=[ape aplot dplyr ggfun ggplot2 magrittr purrr rlang scales tidyr tidytree treeio yulab_utils]; };
1450   ggtreeExtra = derive2 { name="ggtreeExtra"; version="1.6.1"; sha256="0jhk2wqw8mi99n9063wllbl4ajrz1lzqdn7b827316q7ynh8z6ma"; depends=[ggnewscale ggplot2 ggtree rlang tidytree]; };
1451   girafe = derive2 { name="girafe"; version="1.48.0"; sha256="0633w8dyzrwqgnzj7zhr1hwqh617qpcp7cvs33pgsyxmdh52i32p"; depends=[Biobase BiocGenerics Biostrings genomeIntervals intervals IRanges Rsamtools S4Vectors ShortRead]; };
1452   glmGamPoi = derive2 { name="glmGamPoi"; version="1.8.0"; sha256="0k1qyljg89jvc4g3ixv8n50a1fmw3yfa7xjdvrfhbk3xsm6n1lh9"; depends=[beachmat BiocGenerics DelayedArray DelayedMatrixStats HDF5Array matrixStats Rcpp RcppArmadillo SummarizedExperiment]; };
1453   glmSparseNet = derive2 { name="glmSparseNet"; version="1.14.1"; sha256="0xpbxgrfrgysnfcj757a0i9235pivwpga5xz052izyw2p5nfrlr2"; depends=[biomaRt digest dplyr forcats futile_logger futile_options ggplot2 glmnet glue httr Matrix MultiAssayExperiment readr reshape2 stringr SummarizedExperiment survminer]; };
1454   globalSeq = derive2 { name="globalSeq"; version="1.24.0"; sha256="03fb4cd4nbyik7qjblq1fr94gn2xv6jvnb0jzxksdfb7lj8b0axi"; depends=[]; };
1455   globaltest = derive2 { name="globaltest"; version="5.50.0"; sha256="0mdh9xm9l70i5y4783xv76arx0601w6sz3l8h5bmpsavsz8kc9s5"; depends=[annotate AnnotationDbi Biobase survival]; };
1456   gmapR = derive2 { name="gmapR"; version="1.38.0"; sha256="0xmc9js5wpnaggf3ldplyxw5w4f2abavlsfzirr2qpik0ha8f7v8"; depends=[Biobase BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges IRanges Rsamtools rtracklayer S4Vectors VariantAnnotation]; };
1457   gmoviz = derive2 { name="gmoviz"; version="1.8.0"; sha256="110pdblqnr2flmb2gvba6l22p6mrkrqzd1fi3c6pr80hshs7gc95"; depends=[BiocGenerics Biostrings circlize colorspace ComplexHeatmap GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gridBase IRanges pracma Rsamtools rtracklayer S4Vectors]; };
1458   goProfiles = derive2 { name="goProfiles"; version="1.58.0"; sha256="1cdnqsb00gbf9ff9bl19inkh20vmppnda2ib85alvwdbzmhsgflw"; depends=[AnnotationDbi Biobase CompQuadForm GO_db stringr]; };
1459   goSTAG = derive2 { name="goSTAG"; version="1.20.0"; sha256="12ks45lglc23ipkbn89vdlf8l441g9kd2xh49qwinsj6c8zvmd75"; depends=[AnnotationDbi biomaRt GO_db memoise]; };
1460   goTools = derive2 { name="goTools"; version="1.70.0"; sha256="1bxxwrn420vlwkc9jn8jjrvykzzsr7j11lb6mv0i1zrkwpmcmcgp"; depends=[AnnotationDbi GO_db]; };
1461   goseq = derive2 { name="goseq"; version="1.48.0"; sha256="1w0rwzhqkvp2x7y5v0qcyjbss0p95gb1jrnx5sdkqginbvrmrd48"; depends=[AnnotationDbi BiasedUrn BiocGenerics geneLenDataBase GO_db mgcv]; };
1462   gpart = derive2 { name="gpart"; version="1.13.0"; sha256="1518wjkaw22ckgpwl6si83bhijvib0r0kgs9s4das41f0ygi92sd"; depends=[AnnotationDbi biomaRt data_table GenomicRanges Homo_sapiens igraph IRanges OrganismDbi Rcpp TxDb_Hsapiens_UCSC_hg38_knownGene]; };
1463   gpls = derive2 { name="gpls"; version="1.68.0"; sha256="0ai49lk7pba7k42p9wb67sp744gvkkb2rgfqzdpdwnjmndfxqyib"; depends=[]; };
1464   gprege = derive2 { name="gprege"; version="1.39.0"; sha256="12yjyb7a7jc86hdi3a3cavqxfzkhmds1m2vigzw5ihhx6028pa78"; depends=[]; };
1465   gpuMagic = derive2 { name="gpuMagic"; version="1.12.0"; sha256="1g6zxs0wjj6fh23iv65iagyc8lrnzdjkbjv1yf8fq57brzhdl8zl"; depends=[BiocGenerics Deriv DescTools digest pryr Rcpp stringr]; };
1466   granulator = derive2 { name="granulator"; version="1.4.0"; sha256="0bw07kcrg3cwd73crfgm71hdjrp9pprrg5mzx55rmabymn78915s"; depends=[cowplot dplyr dtangle e1071 epiR ggplot2 ggplotify limSolve magrittr MASS nnls pheatmap purrr rlang tibble tidyr]; };
1467   graper = derive2 { name="graper"; version="1.12.0"; sha256="18dfk4d9cxgzmgb8wbagd1qlvlpwgs6nzdz6nzif6n4l6jg8x4b7"; depends=[BH cowplot ggplot2 Matrix matrixStats Rcpp RcppArmadillo]; };
1468   graph = derive2 { name="graph"; version="1.74.0"; sha256="1b8hrjwjg82kicls1496fxfzv75xjvq2k6r9apzsd3qlbyg3ilg4"; depends=[BiocGenerics]; };
1469   graphite = derive2 { name="graphite"; version="1.42.0"; sha256="0nl5mkgrvf7vsqjy48ij9b1dmxfvp9lf8cpay55h93c4qz4x606g"; depends=[AnnotationDbi graph httr rappdirs rlang]; };
1470   groHMM = derive2 { name="groHMM"; version="1.30.1"; sha256="0v2mk7xcy483w2nygpmyjp73kj3v5pkk1kf1wr41n33dxqlddqai"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges MASS rtracklayer S4Vectors]; };
1471   gscreend = derive2 { name="gscreend"; version="1.10.0"; sha256="1dymj9s11nqjv25a3adnhllkgi5dw5lvhgxkg6sd7qpkh1bvbmrx"; depends=[BiocParallel fGarch nloptr SummarizedExperiment]; };
1472   gsean = derive2 { name="gsean"; version="1.16.1"; sha256="1wmz760qyg281i62xmizy3p2ajfb4s99wnss9h9yys2skmqcl1vg"; depends=[fgsea PPInfer]; };
1473   gtrellis = derive2 { name="gtrellis"; version="1.28.0"; sha256="1s4xczzv6hz2kyv32xgcq84540w75qr3f644w1s4c3kwxgyq2gff"; depends=[circlize GenomicRanges GetoptLong IRanges]; };
1474   gwascat = derive2 { name="gwascat"; version="2.28.1"; sha256="19ymdxj8966i4yk0zalfw23938cpv4q7pywg4qb242p44na5y9sl"; depends=[AnnotationDbi AnnotationHub BiocFileCache Biostrings GenomeInfoDb GenomicFeatures GenomicRanges IRanges readr S4Vectors snpStats VariantAnnotation]; };
1475   gwasurvivr = derive2 { name="gwasurvivr"; version="1.14.0"; sha256="1cdknh3ib417ni76wcbns54syqycslj0nzip4pw3sqnsif361ak0"; depends=[GWASTools matrixStats SNPRelate SummarizedExperiment survival VariantAnnotation]; };
1476   h5vc = derive2 { name="h5vc"; version="2.30.0"; sha256="01vvf4bf4a5sfj5rz1b3bc8smvw3j260q4q11bqbq2xaw5lg64q7"; depends=[abind BatchJobs BiocParallel Biostrings GenomeInfoDb GenomicRanges ggplot2 gridExtra h5vcData IRanges reshape rhdf5 Rhtslib Rsamtools S4Vectors]; };
1477   hapFabia = derive2 { name="hapFabia"; version="1.38.0"; sha256="1l50p1hnym8amvdfazp36zp3ijbfsgd8sddbcqivd3rp01898mmr"; depends=[Biobase fabia]; };
1478   hca = derive2 { name="hca"; version="1.4.3"; sha256="1ryac7jcv17lcns8fja24iwayq4sl76yh4xcyv12pp5f5jgpsv1y"; depends=[BiocFileCache digest dplyr httr jsonlite readr tibble tidyr]; };
1479   heatmaps = derive2 { name="heatmaps"; version="1.20.0"; sha256="137cblqfn3w2nrlkffrxhpv1fd0ygy8njqf3n09gf2qw4vgzyz0g"; depends=[BiocGenerics Biostrings EBImage GenomeInfoDb GenomicRanges IRanges KernSmooth Matrix plotrix RColorBrewer]; };
1480   hermes = derive2 { name="hermes"; version="1.0.1"; sha256="0l4rynsz03s4rrdf6pn7sq6x9ra11lal9w65fwxvg1qk83b1gcx4"; depends=[assertthat Biobase BiocGenerics biomaRt checkmate circlize ComplexHeatmap DESeq2 dplyr edgeR EnvStats forcats GenomicRanges ggfortify ggplot2 ggrepel IRanges lifecycle limma magrittr matrixStats MultiAssayExperiment purrr R6 Rdpack rlang S4Vectors SummarizedExperiment tidyr]; };
1481   hiAnnotator = derive2 { name="hiAnnotator"; version="1.30.0"; sha256="0f1imlql09dgckcvf3dr7knr26yjs0r1ryrq54r1lwz57s3rn152"; depends=[BSgenome dplyr foreach GenomicRanges ggplot2 iterators rtracklayer scales]; };
1482   hiReadsProcessor = derive2 { name="hiReadsProcessor"; version="1.32.0"; sha256="0cf0ris5c2xbbmsjnww9lwmmlhya21gmhxfsmcid4bi9gs94qpci"; depends=[BiocGenerics BiocParallel Biostrings dplyr GenomicAlignments GenomicRanges hiAnnotator readxl sonicLength]; };
1483   hierGWAS = derive2 { name="hierGWAS"; version="1.26.0"; sha256="0n8rbk3whs6ysjkdz6zwvdbw5gqrriyzdmyz2b09h6w1dl61cy43"; depends=[fastcluster fmsb glmnet]; };
1484   hierinf = derive2 { name="hierinf"; version="1.14.0"; sha256="0vls36kpz72vahjgx9ghb6aql2f9r5ny9nyg161jjfs1k4s2pr6d"; depends=[fmsb glmnet]; };
1485   hipathia = derive2 { name="hipathia"; version="2.12.0"; sha256="15ggym814jkcbx4kn2d9zi430vcgr50wbzvzj2f1d5qbdhbci9sh"; depends=[AnnotationHub coin DelayedArray igraph limma matrixStats MultiAssayExperiment preprocessCore S4Vectors servr SummarizedExperiment]; };
1486   hmdbQuery = derive2 { name="hmdbQuery"; version="1.16.0"; sha256="0njxxbm58r6ikdh8j3765zy15paips94qyfhbbpb0xpqz7i1idcf"; depends=[S4Vectors XML]; };
1487   hopach = derive2 { name="hopach"; version="2.56.0"; sha256="0c2dx9l2dvhx74z4g2wvbz7m1h77jr257snlqsv2fkdv32m623k4"; depends=[Biobase BiocGenerics cluster]; };
1488   hpar = derive2 { name="hpar"; version="1.38.0"; sha256="07c6r703d5xp7y9bqmqalxgna2qrbk1h5s0d992m7360k259mgrj"; depends=[]; };
1489   hummingbird = derive2 { name="hummingbird"; version="1.6.0"; sha256="1zy35sayjclwcvv6agnvshxhr6l7nd9l0pxyxcfhj1hrqnw5xn14"; depends=[GenomicRanges IRanges Rcpp SummarizedExperiment]; };
1490   hypeR = derive2 { name="hypeR"; version="1.12.0"; sha256="1yk5119jv523kdh3sb85sdkbvrjj4xml8697l3d3f1n84qkicks4"; depends=[dplyr ggforce ggplot2 htmltools httr igraph kableExtra magrittr msigdbr openxlsx purrr R6 reactable reshape2 rlang rmarkdown scales shiny stringr visNetwork]; };
1491   hyperdraw = derive2 { name="hyperdraw"; version="1.48.0"; sha256="0ndw4y6b15jy4w86vfkahmdc81d3ycjsvqy1mxi55dwvd8xq0ap6"; depends=[graph hypergraph Rgraphviz]; };
1492   hypergraph = derive2 { name="hypergraph"; version="1.68.0"; sha256="0xmryqj5yw1ns6wbhjqbb6h14jlj89zrznzvqnvd4n03ci20kzzp"; depends=[graph]; };
1493   iASeq = derive2 { name="iASeq"; version="1.40.0"; sha256="1cwx3pc17lrrskzrq2ghj1vgjc2gmnwbkid531qpvdw0ixqb9jhr"; depends=[]; };
1494   iBBiG = derive2 { name="iBBiG"; version="1.40.0"; sha256="10p9iky61ym8bj1mpyjpslg2ixb3abic5bpfp4yqaqg4vq7a7wip"; depends=[ade4 biclust xtable]; };
1495   iBMQ = derive2 { name="iBMQ"; version="1.36.0"; sha256="0715hr72wvm14f6vb3j4ns94ii8g7kp6fgb7zjdjmqab92hqm1rd"; depends=[Biobase ggplot2]; };
1496   iCARE = derive2 { name="iCARE"; version="1.24.0"; sha256="1b09q6z240rc4cx9mz61f1l65khwxlq03f2sal0cf1y2584p4hxl"; depends=[gtools Hmisc plotrix]; };
1497   iCNV = derive2 { name="iCNV"; version="1.16.0"; sha256="12fyj9nxsfzckyb7qjwg8a4v335hzg0d0fgav3g00i30c7ldqlam"; depends=[CODEX data_table dplyr fields ggplot2 rlang tidyr truncnorm]; };
1498   iCOBRA = derive2 { name="iCOBRA"; version="1.24.1"; sha256="1gvra5bgsf6lvs4f2md3xx7xxsx4j8079c2nr8vz9lvy2sfyl6s9"; depends=[dplyr DT ggplot2 limma markdown reshape2 ROCR scales shiny shinyBS shinydashboard UpSetR]; };
1499   iCheck = derive2 { name="iCheck"; version="1.26.0"; sha256="0phc4xr9vclmd2xkcjaa5l8w6v1748hs63asfbl0xl6xgj5475mc"; depends=[affy Biobase GeneSelectMMD gplots limma lmtest lumi MASS preprocessCore randomForest rgl scatterplot3d]; };
1500   iChip = derive2 { name="iChip"; version="1.50.0"; sha256="0p5n20yjr94l76ibmlcvbq48zw9a14dpdza0k0mg16vq17lqz2rf"; depends=[limma]; };
1501   iClusterPlus = derive2 { name="iClusterPlus"; version="1.32.0"; sha256="0xzx3vly3p99zc5a69pra4jjp8d3bdhx7dl1l76w459cs58zy0sm"; depends=[]; };
1502   iGC = derive2 { name="iGC"; version="1.26.0"; sha256="1brdkdclmydj44485irzwva375zp13mf9vjw5xd5lhdq88ishnsc"; depends=[data_table plyr]; };
1503   iPAC = derive2 { name="iPAC"; version="1.40.0"; sha256="1h7dxq6isc5zbpi01zj4xsncs9a5l4x5lflqv0lfi2n11y8y4x40"; depends=[Biostrings gdata multtest scatterplot3d]; };
1504   iPath = derive2 { name="iPath"; version="1.2.0"; sha256="1gkw3j3fc5rydxzm3dhv10wwvnhgfb8hic1842irmnb3rqwg0khw"; depends=[BiocParallel ggplot2 ggpubr matrixStats mclust Rcpp RcppArmadillo survival survminer]; };
1505   iSEE = derive2 { name="iSEE"; version="2.8.0"; sha256="1smpd3hfs415g4qiz3s9d8qsy5n84ppy23q0vwhfg8gh2lypikzh"; depends=[BiocGenerics circlize colourpicker ComplexHeatmap DT ggplot2 ggrepel igraph mgcv rintrojs S4Vectors shiny shinyAce shinydashboard shinyjs shinyWidgets SingleCellExperiment SummarizedExperiment vipor viridisLite]; };
1506   iSEEu = derive2 { name="iSEEu"; version="1.8.0"; sha256="1j0ksx6sdk0g44yi3dccgnqhf9jqfzmax131d52q2s6yfn1m1dhw"; depends=[colourpicker DT ggplot2 IRanges iSEE S4Vectors shiny shinyAce SingleCellExperiment SummarizedExperiment]; };
1507   iSeq = derive2 { name="iSeq"; version="1.48.0"; sha256="09zba3mr55n42kyw89r4vbykczq3y97hsy2a55a2b8zmsh27w2dc"; depends=[]; };
1508   iasva = derive2 { name="iasva"; version="1.14.0"; sha256="070bda8fxm1gby2jq5zpbd85l10kxhsy7a8jac3s6rpf1saz70m1"; depends=[BiocParallel cluster irlba SummarizedExperiment]; };
1509   ibh = derive2 { name="ibh"; version="1.44.0"; sha256="0l7436yk3hv73zljg00mxa5nyilsxphhwliy5h3a4ci02pdfa92k"; depends=[simpIntLists]; };
1510   icetea = derive2 { name="icetea"; version="1.14.0"; sha256="1n642pa32yr6lmz4362875p5f6z1zdxdg96ljxfc1fsfkvdhjv0c"; depends=[BiocGenerics BiocParallel Biostrings csaw DESeq2 edgeR GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges limma Rsamtools rtracklayer S4Vectors ShortRead SummarizedExperiment TxDb_Dmelanogaster_UCSC_dm6_ensGene VariantAnnotation]; };
1511   ideal = derive2 { name="ideal"; version="1.20.0"; sha256="0bgc7f2c1m777acmfx1lcsiga8kf4db6wx0rb56hwhq2yw2h1x7r"; depends=[AnnotationDbi base64enc BiocParallel DESeq2 dplyr DT GenomicRanges ggplot2 ggrepel GO_db goseq GOstats gplots heatmaply IHW IRanges knitr limma pcaExplorer pheatmap plotly rentrez rintrojs rlang rmarkdown S4Vectors shiny shinyAce shinyBS shinydashboard stringr SummarizedExperiment topGO UpSetR]; };
1512   idiogram = derive2 { name="idiogram"; version="1.72.0"; sha256="1w749dmbmgwrbxdpcakd48l6sfcshafqhlkrq5gzb6bhq1ll3xwy"; depends=[annotate Biobase plotrix]; };
1513   idpr = derive2 { name="idpr"; version="1.6.0"; sha256="1xl73m1lwy0336r5aan8sam8ac61h2flapj7m1ag0acpy0bhvg23"; depends=[Biostrings dplyr ggplot2 jsonlite magrittr plyr rlang]; };
1514   idr2d = derive2 { name="idr2d"; version="1.10.0"; sha256="0la044qyjnic6cbnvsas1dx7xgiz64qp4ygpsb1g6qhk2m0ybzj1"; depends=[dplyr futile_logger GenomeInfoDb GenomicRanges ggplot2 idr IRanges magrittr reticulate scales stringr]; };
1515   igvR = derive2 { name="igvR"; version="1.16.0"; sha256="0jaj600dcis1xd4hp6zw3j92zqi476zxlnb3lhcsszx7rg6lqnfp"; depends=[BiocGenerics BrowserViz GenomicAlignments GenomicRanges httpuv MotifDb RColorBrewer rtracklayer seqLogo VariantAnnotation]; };
1516   illuminaio = derive2 { name="illuminaio"; version="0.38.0"; sha256="1xk057a9w4ps8xi8jyw8imkjcicfmzns8g92grn4af7yiip68h62"; depends=[base64]; };
1517   imageHTS = derive2 { name="imageHTS"; version="1.45.1"; sha256="18cv1mss1vgm4zwx37nijc1riw2n9lwl73l2cfiqglblgdmyq2sm"; depends=[Biobase cellHTS2 e1071 EBImage hwriter vsn]; };
1518   imcRtools = derive2 { name="imcRtools"; version="1.2.3"; sha256="1a2gapm9642x7a4m9cl95fpl6qq3zrhgvib8rqzx465d0p47szfw"; depends=[abind BiocNeighbors BiocParallel concaveman cytomapper data_table dplyr DT EBImage ggplot2 ggraph igraph magrittr pheatmap readr RTriangle S4Vectors scuttle sf SingleCellExperiment SpatialExperiment stringr SummarizedExperiment tidygraph viridis vroom]; };
1519   immunoClust = derive2 { name="immunoClust"; version="1.28.0"; sha256="10dwlg91wg38s97hivd8fm4wkmv0nv7xcw8dwdh2g7m5pip7nchp"; depends=[flowCore lattice]; };
1520   immunotation = derive2 { name="immunotation"; version="1.4.0"; sha256="06yknvqz65x3vgc9xykdwhsgqhz75jr038fwnjjr2ir8x9h6fri5"; depends=[curl ggplot2 maps ontologyIndex readr rlang rvest stringr tidyr xml2]; };
1521   impute = derive2 { name="impute"; version="1.70.0"; sha256="11b0z7py0im6y43k55xpzz5jnvc0ram9rk3n1n4mwhvs0vhy39r2"; depends=[]; };
1522   infercnv = derive2 { name="infercnv"; version="1.12.0"; sha256="01f021fdxm058733rky46dlvqg7dmf5mn5x9lnq0fspp5665w3bl"; depends=[ape argparse BiocGenerics caTools coda coin digest doParallel dplyr edgeR fastcluster fitdistrplus foreach futile_logger future ggplot2 gplots gridExtra HiddenMarkov leiden Matrix parallelDist phyclust RANN RColorBrewer reshape rjags SingleCellExperiment SummarizedExperiment tidyr]; };
1523   infinityFlow = derive2 { name="infinityFlow"; version="1.6.0"; sha256="14qdamv4ydbqwxw7gfm1yqzgihb7zxpi9irji0a5mnvvyrkzrfpz"; depends=[Biobase flowCore generics gtools matlab pbapply png raster uwot xgboost]; };
1524   intansv = derive2 { name="intansv"; version="1.36.0"; sha256="1x7386g0f1amjhvpb75ma86ifagh73d3yqmh1aq25r3cwgkgi9lc"; depends=[BiocGenerics GenomicRanges ggbio IRanges plyr]; };
1525   interacCircos = derive2 { name="interacCircos"; version="1.6.0"; sha256="1jk2mr271dabwjxz3a0habpy0cs6gh4wcdkl9yfb17g41qr3gd1s"; depends=[htmlwidgets plyr RColorBrewer]; };
1526   interactiveDisplay = derive2 { name="interactiveDisplay"; version="1.34.0"; sha256="0flfn30q4qd0dp39qqswvg83vs568spbyiplqnsrp85nprnrxk9g"; depends=[AnnotationDbi BiocGenerics Category ggplot2 gridSVG interactiveDisplayBase plyr RColorBrewer reshape2 shiny XML]; };
1527   interactiveDisplayBase = derive2 { name="interactiveDisplayBase"; version="1.34.0"; sha256="0fdwx5ch0ch8axdkfiq7zzhhq5hwcvd6kf8fggw9nd3ah1yjwbdg"; depends=[BiocGenerics DT shiny]; };
1528   inveRsion = derive2 { name="inveRsion"; version="1.43.0"; sha256="0h2q10xf4x22hy7780w4pvq488921wzjngly8qcc97sa8iacssk3"; depends=[haplo_stats]; };
1529   ipdDb = derive2 { name="ipdDb"; version="1.14.0"; sha256="12wnl8gpkwvp3lvdw5qfjy8n2wpwgm7hgp0cx4lysyr7hchfjzi1"; depends=[AnnotationDbi AnnotationHub assertthat Biostrings DBI GenomicRanges IRanges RSQLite]; };
1530   isobar = derive2 { name="isobar"; version="1.42.0"; sha256="1z8qxdd4kqdi55g84lb8268nd270y4knzrpcm3b1gvxd91pynbq4"; depends=[Biobase biomaRt distr ggplot2 plyr]; };
1531   isomiRs = derive2 { name="isomiRs"; version="1.24.1"; sha256="14a9a5k435yn4csbhmh9yplyn2k889jhrav31bsaiixfms16v3k8"; depends=[AnnotationDbi assertive_sets Biobase BiocGenerics broom cluster cowplot DEGreport DESeq2 dplyr GenomicRanges GGally ggplot2 gplots gridExtra gtools IRanges limma RColorBrewer readr reshape rlang S4Vectors stringr SummarizedExperiment tibble tidyr]; };
1532   iterClust = derive2 { name="iterClust"; version="1.18.0"; sha256="11j6ssy88v0wxqkx9b4skqi8jww8b4nh1gjl8smlnw98lvf5vwl4"; depends=[Biobase cluster]; };
1533   iterativeBMA = derive2 { name="iterativeBMA"; version="1.54.0"; sha256="1ykn4cac33w85gxh1bbqcg06xx0jsx1ivq4477h0057y3vf09cck"; depends=[Biobase BMA leaps]; };
1534   iterativeBMAsurv = derive2 { name="iterativeBMAsurv"; version="1.54.0"; sha256="0fll6aqmh4dbrn4pv8nwp5cnsc2jd40clfnb76zzgi6qka5h2kms"; depends=[BMA leaps survival]; };
1535   iteremoval = derive2 { name="iteremoval"; version="1.15.1"; sha256="0bwl8lzxvf5azwyacv9x16l4kyi8l00xny2s83gp2kng5gyz8602"; depends=[GenomicRanges ggplot2 magrittr SummarizedExperiment]; };
1536   ivygapSE = derive2 { name="ivygapSE"; version="1.18.0"; sha256="04ril40rs4y4j8b8pbxxgj3qzxy5n7vcd9wfdmfr10c9j489sixw"; depends=[ggplot2 hwriter plotly S4Vectors shiny SummarizedExperiment survival survminer UpSetR]; };
1537   karyoploteR = derive2 { name="karyoploteR"; version="1.22.0"; sha256="0hawq9wi3ikvlcdgnjfy5fiiwfq22zwx1p8xf5h4bpypp96pknsk"; depends=[AnnotationDbi bamsignals bezier biovizBase digest GenomeInfoDb GenomicFeatures GenomicRanges IRanges memoise regioneR Rsamtools rtracklayer S4Vectors VariantAnnotation]; };
1538   kebabs = derive2 { name="kebabs"; version="1.30.0"; sha256="04ipdf3vcmg2817i314vkxw8yy358iwq9i23f1bwa86qq0a1q6f0"; depends=[apcluster Biostrings e1071 IRanges kernlab LiblineaR Matrix Rcpp S4Vectors XVector]; };
1539   keggorthology = derive2 { name="keggorthology"; version="2.48.0"; sha256="1a5cjsp610pvr7s27schr3hi06i47v73f0f6n5wzf6062cjvrrbh"; depends=[AnnotationDbi DBI graph hgu95av2_db]; };
1540   kissDE = derive2 { name="kissDE"; version="1.16.0"; sha256="16gx3cpmi1xb78g12aiajm6k93fx5wk0j82kv682dd2j8qzfxq1n"; depends=[ade4 aods3 Biobase DESeq2 doParallel DSS DT factoextra foreach ggplot2 gplots matrixStats shiny shinycssloaders]; };
1541   lapmix = derive2 { name="lapmix"; version="1.62.0"; sha256="15ydcqvawmwradx20x5jz0lrvfrgfjxgnfcnrxxknv5iqh2d035y"; depends=[Biobase]; };
1542   ldblock = derive2 { name="ldblock"; version="1.26.0"; sha256="08ss03b93czwb4x60hsi30ad4lmamvq5mxa8nj0g18z68qcraijm"; depends=[BiocGenerics EnsDb_Hsapiens_v75 ensembldb GenomeInfoDb GenomicFiles httr Matrix Rsamtools snpStats VariantAnnotation]; };
1543   lefser = derive2 { name="lefser"; version="1.6.0"; sha256="0n3gf60c4r1p81ifn4xklmm3npp790p8vw7mdi1f6bb5vm373rj0"; depends=[coin ggplot2 MASS SummarizedExperiment]; };
1544   les = derive2 { name="les"; version="1.46.0"; sha256="07c805gcyc7b462hbkvkkjajk8sn735j1js452lz67ixf03pwcaq"; depends=[boot fdrtool gplots RColorBrewer]; };
1545   levi = derive2 { name="levi"; version="1.14.0"; sha256="1dh314yd0zpnmi2vfnf41fhzpg76cgwgzkbm93vcxwrszj53cljc"; depends=[colorspace dplyr DT ggplot2 httr igraph knitr RColorBrewer Rcpp reshape2 rmarkdown shiny shinydashboard shinyjs testthat xml2]; };
1546   lfa = derive2 { name="lfa"; version="1.26.0"; sha256="044866h4fnxmzb3sh9vmrd2smgsbcqgvd19dgwxisi418cad577l"; depends=[corpcor]; };
1547   limma = derive2 { name="limma"; version="3.52.4"; sha256="14xy3qyra2crz31sxgz768mhnhhvcpfhfcigf4xsii643lqcz75h"; depends=[]; };
1548   limmaGUI = derive2 { name="limmaGUI"; version="1.72.0"; sha256="1sq20bdnc9j93iink9cs1p50alzgqfjcxikr8p0dfvd96c4js5b7"; depends=[limma R2HTML tkrplot xtable]; };
1549   lineagespot = derive2 { name="lineagespot"; version="1.0.0"; sha256="0bn0rr7c8x576p53d7p7q0hs7dh5y7dm4z5dgcrp9m8pqgdq3n9h"; depends=[data_table httr MatrixGenerics stringr SummarizedExperiment VariantAnnotation]; };
1550   lionessR = derive2 { name="lionessR"; version="1.10.0"; sha256="182hyz7acnlmprfn3555d1li73abahkylznrnqzizyi20r3nwczq"; depends=[S4Vectors SummarizedExperiment]; };
1551   lipidr = derive2 { name="lipidr"; version="2.10.0"; sha256="053q300caqn2a5rjxxc6c9b5drrk1y6bllm96rb7nxlwxzkkjlpg"; depends=[data_table dplyr fgsea forcats ggplot2 imputeLCMD limma magrittr rlang ropls S4Vectors SummarizedExperiment tidyr]; };
1552   lisaClust = derive2 { name="lisaClust"; version="1.4.0"; sha256="0411vkzz5rh937qcamrsmyvrjbncjgj961lmvd9vqpbf2srvd902"; depends=[BiocGenerics BiocParallel class concaveman data_table dplyr ggplot2 purrr S4Vectors spatstat_core spatstat_geom spicyR tidyr]; };
1553   lmdme = derive2 { name="lmdme"; version="1.38.0"; sha256="1x56d40v9v0jz9dmxqkvpc756fqwh31119qx1bsamrz03263fhw8"; depends=[limma pls stemHypoxia]; };
1554   loci2path = derive2 { name="loci2path"; version="1.16.0"; sha256="03gqzjn619fz7c53lcj3p7kycdl7minmv81zszf0jw5m8xgab7a5"; depends=[BiocParallel data_table GenomicRanges pheatmap RColorBrewer S4Vectors wordcloud]; };
1555   logicFS = derive2 { name="logicFS"; version="2.16.0"; sha256="06y064fkns71m4h7w7mmf75myd22zv000g7drkxwx25x6jqghcgg"; depends=[LogicReg mcbiopi survival]; };
1556   logitT = derive2 { name="logitT"; version="1.54.0"; sha256="0z8yphvca5glhwbrzdd5vz07243akm0fyyx8x9004frsyqrsyyva"; depends=[affy]; };
1557   lpNet = derive2 { name="lpNet"; version="2.28.0"; sha256="17l7k07vf21y4yw5s640xp4lh686y74sd773ij92r2spc3vk4bnm"; depends=[lpSolve]; };
1558   lpsymphony = derive2 { name="lpsymphony"; version="1.24.0"; sha256="0kc708ss5byzw8qh439mb4nq6hsfmz73gfamiznw3lv352brd33g"; depends=[]; };
1559   lumi = derive2 { name="lumi"; version="2.48.0"; sha256="06zmll5j1yymsm3byarhllrz4q1w5mzv267a9g6visn73wan8y9d"; depends=[affy annotate AnnotationDbi Biobase DBI GenomicFeatures GenomicRanges KernSmooth lattice MASS methylumi mgcv nleqslv preprocessCore RSQLite]; };
1560   m6Aboost = derive2 { name="m6Aboost"; version="1.2.0"; sha256="0qi7l52c3m08i4c4vj44azycb5qj99qnjmkpl5j9j13scpancnpw"; depends=[adabag Biostrings BSgenome dplyr ExperimentHub GenomicRanges IRanges rtracklayer S4Vectors]; };
1561   mAPKL = derive2 { name="mAPKL"; version="1.26.0"; sha256="0zzfdwjssig6km1c630jx8pl0q20c5y16z6jrms43zhbk52h2p1s"; depends=[AnnotationDbi apcluster Biobase clusterSim e1071 igraph limma multtest parmigene reactome_db]; };
1562   mBPCR = derive2 { name="mBPCR"; version="1.50.0"; sha256="1gdd5jj0dpimp0ix2i7dspkkggn0m5d36cvhsvyr0y5k3gq5cail"; depends=[Biobase GWASTools oligoClasses]; };
1563   mCSEA = derive2 { name="mCSEA"; version="1.16.0"; sha256="10g46k9ryg183dhaakmbjnpqhx4a4q9r1fjf9gfnpaycspmh7hx8"; depends=[biomaRt fgsea GenomicFeatures GenomicRanges ggplot2 Gviz Homo_sapiens IRanges limma mCSEAdata S4Vectors SummarizedExperiment]; };
1564   maCorrPlot = derive2 { name="maCorrPlot"; version="1.66.0"; sha256="018hc5sqp23cmfdr0k4dgx9rwl3f6f9fgab99h5hlg8rrqhy2abm"; depends=[lattice]; };
1565   maPredictDSC = derive2 { name="maPredictDSC"; version="1.34.0"; sha256="0rn3s0lpbrdkhbqsg94x4b2fwybrpfyys0ih2dkdscdc9h9dapyw"; depends=[affy AnnotationDbi caret class e1071 gcrma hgu133plus2_db limma LungCancerACvsSCCGEO MASS ROC ROCR]; };
1566   maSigPro = derive2 { name="maSigPro"; version="1.68.0"; sha256="1l478qjx3cx6xc9j5gl3hv3dbrglrd2dgsifvpmw64y6a00zz09g"; depends=[Biobase MASS mclust venn]; };
1567   maanova = derive2 { name="maanova"; version="1.66.0"; sha256="0nh2wn8zyipm2sxxqlj0nnghybnxc2y77h031c3maab1c6kjmjiq"; depends=[Biobase]; };
1568   macat = derive2 { name="macat"; version="1.70.0"; sha256="1w3a0s5p93zhx8vrf0qmspisnm3gf0j1z8l38wgc86k0d9zjcbs8"; depends=[annotate Biobase]; };
1569   made4 = derive2 { name="made4"; version="1.70.0"; sha256="1wrv9d2mp799qzy1bsaj4w7wx12gdhfv9qvklz7z41vfz59d6bq5"; depends=[ade4 Biobase gplots RColorBrewer scatterplot3d SummarizedExperiment]; };
1570   maftools = derive2 { name="maftools"; version="2.12.0"; sha256="1gqfi95v4fs64n4walij0g2kds3fbbwp6lih5yakmgf6kj8fpkk6"; depends=[data_table DNAcopy RColorBrewer Rhtslib survival zlibbioc]; };
1571   maigesPack = derive2 { name="maigesPack"; version="1.60.0"; sha256="1imqs7jr3hnib90dclwfxx5cagf0in8zd0hz3jqw5x2xyfq2mzbp"; depends=[convert graph limma marray]; };
1572   makecdfenv = derive2 { name="makecdfenv"; version="1.72.0"; sha256="03lqcrbyasqychzay8iflkdfqsbsncvaxmn3g3nwr9p7l726gsik"; depends=[affy affyio Biobase zlibbioc]; };
1573   mapscape = derive2 { name="mapscape"; version="1.20.0"; sha256="1x9446fakxmnpkzfk541kihc95y2ilnvq7v9icky4175s70492w4"; depends=[base64enc htmlwidgets jsonlite stringr]; };
1574   marr = derive2 { name="marr"; version="1.6.0"; sha256="1y7s30wxk75qk2w19irs77kkg7kghs247h6n4abxvnv3wq4ygwmd"; depends=[dplyr ggplot2 magrittr Rcpp rlang S4Vectors SummarizedExperiment]; };
1575   marray = derive2 { name="marray"; version="1.74.0"; sha256="0awfz0akz3sylyw1jxhxgadv1rqdzvy9v11933yxkl9a8m9ngm8i"; depends=[limma]; };
1576   martini = derive2 { name="martini"; version="1.16.0"; sha256="043pl5r2ahnv6i7x1yd9pvs0v4xpajyxick1liivp4zrgxskpfs4"; depends=[igraph Matrix Rcpp RcppEigen snpStats]; };
1577   maser = derive2 { name="maser"; version="1.14.0"; sha256="0zl390lcahk9ipadi8jj25jf50dv6sxsmi54qj1nzq0q6qh0hyay"; depends=[BiocGenerics data_table dplyr DT GenomeInfoDb GenomicRanges ggplot2 Gviz IRanges reshape2 rtracklayer]; };
1578   maskBAD = derive2 { name="maskBAD"; version="1.40.0"; sha256="05aznwh5jmv4bd5s2gb6kjwz0zn7523qkpygdlrb5pxhh1vw1b5j"; depends=[affy gcrma]; };
1579   massiR = derive2 { name="massiR"; version="1.32.0"; sha256="179f1fd6xxaq7hwk6pixp3pbqmlx06mb7kin4ajwl5gch7kkr2qn"; depends=[Biobase cluster diptest gplots]; };
1580   matchBox = derive2 { name="matchBox"; version="1.38.0"; sha256="14jhbfvi6rwal693zbmb00pkzhpzmhib5ihr63m2y1ccmisnfqkp"; depends=[]; };
1581   matter = derive2 { name="matter"; version="1.22.0"; sha256="0pgi7vq1arrdhqyc34dkylbz6s4f1wx8j38ddk9yfi8m45nbhqig"; depends=[biglm BiocGenerics BiocParallel digest irlba Matrix ProtGenerics]; };
1582   mbOmic = derive2 { name="mbOmic"; version="1.0.0"; sha256="13lb639g3cg5k6y215r40hxn2g5i4flz0cyxgs3nfn7wf3y2cfyi"; depends=[cluster clusterSim data_table doParallel igraph psych visNetwork WGCNA]; };
1583   mbkmeans = derive2 { name="mbkmeans"; version="1.12.0"; sha256="1f5krzlyqljz763vkp1a50danjn78xhn35s8qqdvzrmwyx0fzphg"; depends=[beachmat benchmarkme BiocParallel ClusterR DelayedArray Matrix Rcpp RcppArmadillo Rhdf5lib S4Vectors SingleCellExperiment SummarizedExperiment]; };
1584   mdp = derive2 { name="mdp"; version="1.16.0"; sha256="1r7w7mzq6a31rjfnpbanvvk95nai189bggw4kj8y08k8kf44hsji"; depends=[ggplot2 gridExtra]; };
1585   mdqc = derive2 { name="mdqc"; version="1.58.0"; sha256="132spf0yhc864f8adsavyljcnmq28p1cpw8clb0rsi1v3hrj6kn5"; depends=[cluster MASS]; };
1586   megadepth = derive2 { name="megadepth"; version="1.6.0"; sha256="0qq82dmd3drr2bhn51bgbc6ml40klfmmhj6wdj72n9ya6n60lwy8"; depends=[cmdfun dplyr fs GenomicRanges magrittr readr xfun]; };
1587   memes = derive2 { name="memes"; version="1.4.1"; sha256="1s0mdfhvq52vg3494wgh4ar8vax5bc99gqsaism3d7vi4h9wnhzn"; depends=[Biostrings cmdfun dplyr GenomicRanges ggplot2 ggseqlogo magrittr matrixStats patchwork processx purrr readr rlang tibble tidyr universalmotif usethis xml2]; };
1588   meshes = derive2 { name="meshes"; version="1.22.0"; sha256="1affs7w2rwzkl2gh895ixwpvmp158acx1i4vcjg25gvak3wnwapq"; depends=[AnnotationDbi AnnotationHub DOSE enrichplot GOSemSim MeSHDbi yulab_utils]; };
1589   meshr = derive2 { name="meshr"; version="2.2.0"; sha256="1gaxjz5day6xipfh8dy0nxf7vxnvdy9b9hfdp83ysyhxszb36fdl"; depends=[BiocGenerics BiocStyle Category fdrtool knitr markdown MeSHDbi rmarkdown RSQLite S4Vectors]; };
1590   messina = derive2 { name="messina"; version="1.32.0"; sha256="1avfj9xdx1mi7f1sdl9j1xf1jhj5cibkiwwy7aa1w7chz1mz8hr4"; depends=[foreach ggplot2 plyr Rcpp survival]; };
1591   metaCCA = derive2 { name="metaCCA"; version="1.24.0"; sha256="1shpb8p7rxf101k8vy4nd6fllgfm3jazv87h5qk5mhfcfrja0819"; depends=[]; };
1592   metaMS = derive2 { name="metaMS"; version="1.32.0"; sha256="00mdv3k3qndjznxixvnb7v764wz8c6zh2jzm0h948ra3ap345fga"; depends=[BiocGenerics CAMERA Matrix robustbase xcms]; };
1593   metaSeq = derive2 { name="metaSeq"; version="1.36.0"; sha256="0775xgvmcaqf6pgm8651pcnlkd3adwpdzac295g1xmcwfj3r7sav"; depends=[NOISeq Rcpp snow]; };
1594   metabCombiner = derive2 { name="metabCombiner"; version="1.6.0"; sha256="1vnh0bqfzknpflk0j5y9jxggmc3m4irxyfbkm9jf6k5a30fnmmxb"; depends=[caret dplyr matrixStats mgcv rlang S4Vectors tidyr]; };
1595   metabolomicsWorkbenchR = derive2 { name="metabolomicsWorkbenchR"; version="1.6.0"; sha256="0mg7wrg8qgv11w7179nrw5w7209qjqbirm9niz2ygw1pidg0slc8"; depends=[data_table httr jsonlite MultiAssayExperiment struct SummarizedExperiment]; };
1596   metabomxtr = derive2 { name="metabomxtr"; version="1.30.0"; sha256="0z02b91gd71b5ksfk2ql5jldicsqh66z2yvv5yyws98xl0qqrrxw"; depends=[Biobase BiocParallel Formula ggplot2 multtest optimx plyr]; };
1597   metagene = derive2 { name="metagene"; version="2.28.1"; sha256="1r6kjwbwhksmk9kpvpmn9zwlfllznpam880ma4imsz6pgzfxsskw"; depends=[BiocParallel data_table EnsDb_Hsapiens_v86 ensembldb GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gplots IRanges magrittr matrixStats purrr R6 Rsamtools rtracklayer stringr]; };
1598   metagene2 = derive2 { name="metagene2"; version="1.12.0"; sha256="1606i1kw8i4q1m07x2yax2mfmj9knzd7jiqgzq3fn792z1yj1bsb"; depends=[BiocParallel data_table dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges magrittr purrr R6 reshape2 Rsamtools rtracklayer]; };
1599   metagenomeSeq = derive2 { name="metagenomeSeq"; version="1.38.0"; sha256="0v8h8ld4gzq0v90hfprw3v8j2hlac44wxyj2m6qmz0y5hml97k02"; depends=[Biobase foreach glmnet gplots limma Matrix matrixStats RColorBrewer Wrench]; };
1600   metahdep = derive2 { name="metahdep"; version="1.54.0"; sha256="1y8pr873jy1ax8n8qp8kihagddk5j03pjwmxff03amnqrnxyphlv"; depends=[]; };
1601   metapod = derive2 { name="metapod"; version="1.4.0"; sha256="19g9c08alg4qqr710si465wlb5dy759m5d8wn91zwj24077dds7b"; depends=[Rcpp]; };
1602   metapone = derive2 { name="metapone"; version="1.2.0"; sha256="11q90c6qif030xffhfr8ii7vffbg2q2y6n2w8fj0x39yis6qcgf9"; depends=[BiocParallel fdrtool fgsea fields ggplot2 ggrepel markdown]; };
1603   metaseqR2 = derive2 { name="metaseqR2"; version="1.8.2"; sha256="1zrbn45r62nzb1rq8xlksl6dr1zlvy6zg3dgqg7ks9aqv5grd7w4"; depends=[ABSSeq baySeq Biobase BiocGenerics BiocParallel biomaRt Biostrings corrplot DESeq2 DSS DT EDASeq edgeR genefilter GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges gplots harmonicmeanp heatmaply htmltools httr IRanges jsonlite lattice limma locfit log4r magrittr MASS Matrix NBPSeq pander qvalue rmarkdown rmdformats Rsamtools RSQLite rtracklayer S4Vectors stringr SummarizedExperiment survcomp VennDiagram vsn yaml zoo]; };
1604   metavizr = derive2 { name="metavizr"; version="1.20.0"; sha256="0sjz94a46a3frij3vx7dp4xhxn0snhrr219hg53v5ypnfbqyyxin"; depends=[Biobase data_table digest epivizr epivizrData epivizrServer epivizrStandalone GenomeInfoDb httr metagenomeSeq phyloseq vegan]; };
1605   methInheritSim = derive2 { name="methInheritSim"; version="1.18.0"; sha256="1g7wygaqhn1fsxaijzcil7inby25c1m85ph3xrkjn12m9lhxzzxv"; depends=[BiocGenerics GenomeInfoDb GenomicRanges IRanges methylKit msm S4Vectors]; };
1606   methimpute = derive2 { name="methimpute"; version="1.18.0"; sha256="1d197yf3hfnag6s2pr7vy69vmrh1v8bdxwfylb7v7xsjkhjb1nv7"; depends=[Biostrings data_table GenomeInfoDb GenomicRanges ggplot2 IRanges minpack_lm Rcpp reshape2]; };
1607   methrix = derive2 { name="methrix"; version="1.10.0"; sha256="0717pazv7yakj3b0c8p7rzb4iykyiv8vh02c4357qc3kwarkpncj"; depends=[BSgenome data_table DelayedArray DelayedMatrixStats GenomicRanges ggplot2 HDF5Array IRanges matrixStats rtracklayer SummarizedExperiment]; };
1608   methylCC = derive2 { name="methylCC"; version="1.10.0"; sha256="0sigx62cy47cmpirr6nqcdik5dxkn79j2xjap36jmipaa2i914s2"; depends=[Biobase bsseq bumphunter dplyr FlowSorted_Blood_450k genefilter GenomicRanges IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IRanges magrittr minfi plyranges quadprog S4Vectors]; };
1609   methylGSA = derive2 { name="methylGSA"; version="1.14.0"; sha256="0lmzipk9mn3m0nv9fmfc5q53w7f1pz37cyj18n501p3p6ljqhz3r"; depends=[AnnotationDbi BiocParallel clusterProfiler ggplot2 GO_db IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 missMethyl org_Hs_eg_db reactome_db RobustRankAggreg shiny stringr]; };
1610   methylInheritance = derive2 { name="methylInheritance"; version="1.20.0"; sha256="0a0rgi396jghxpsq44ybn518r8qkz329kpnpfb0jggwc8ygg56id"; depends=[BiocParallel GenomicRanges ggplot2 gridExtra IRanges methylKit rebus S4Vectors]; };
1611   methylKit = derive2 { name="methylKit"; version="1.22.0"; sha256="00asjzv05avfg0rrkmfbdqd6xx8d18zi72n3b1kf9wj81z2d2a35"; depends=[data_table emdbook fastseg GenomeInfoDb GenomicRanges gtools IRanges KernSmooth limma mclust mgcv qvalue R_utils Rcpp Rhtslib Rsamtools rtracklayer S4Vectors zlibbioc]; };
1612   methylMnM = derive2 { name="methylMnM"; version="1.34.0"; sha256="1mxkxs06j8mi44rqnzz52dnarhh1x120qqxwkdlggl8ll36zkhrm"; depends=[edgeR statmod]; };
1613   methylPipe = derive2 { name="methylPipe"; version="1.30.0"; sha256="15wssa2mp3rx4ccgnmq8bb4b7h0g6vccy2i18vc45v79gq3bn3if"; depends=[BiocGenerics Biostrings data_table GenomeInfoDb GenomicAlignments GenomicRanges gplots Gviz IRanges marray Rsamtools S4Vectors SummarizedExperiment]; };
1614   methylSig = derive2 { name="methylSig"; version="1.8.0"; sha256="1qmd2hkinr7d4dd026r3ah0k5hrdpv1zazr8vqvx7rvxmkzz55g5"; depends=[bsseq DelayedArray DelayedMatrixStats DSS GenomeInfoDb GenomicRanges IRanges S4Vectors]; };
1615   methylclock = derive2 { name="methylclock"; version="1.2.1"; sha256="08a4yapgdryz410b8s42f1wiy1zzkk6xmvsqmbmb2gsxsfiv48a7"; depends=[Biobase devtools dplyr dynamicTreeCut ExperimentHub ggplot2 ggpmisc ggpubr gridExtra impute methylclockData minfi PerformanceAnalytics planet preprocessCore quadprog Rcpp RPMM tibble tidyr tidyverse]; };
1616   methylscaper = derive2 { name="methylscaper"; version="1.4.0"; sha256="19vp4hp67qvjxhbkhhhsgxa91hq5p19qsk5rjmksd5xqvgs1g4gw"; depends=[BiocParallel Biostrings data_table Rfast seqinr seriation shiny shinyFiles shinyjs SummarizedExperiment]; };
1617   methylumi = derive2 { name="methylumi"; version="2.42.0"; sha256="0klkinq55lfj1d4z8gkrv98849079x1l5gd15habw7jq9xxvhjww"; depends=[annotate AnnotationDbi Biobase BiocGenerics FDb_InfiniumMethylation_hg19 genefilter GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 illuminaio IRanges lattice matrixStats minfi reshape2 S4Vectors scales SummarizedExperiment]; };
1618   mfa = derive2 { name="mfa"; version="1.18.0"; sha256="0xwrwaldj78rmr1zyvz8mw9rxqdp8vr4s9k2776ijx7s71zklh8z"; depends=[Biobase coda dplyr ggmcmc ggplot2 magrittr MCMCglmm MCMCpack Rcpp tibble]; };
1619   mgsa = derive2 { name="mgsa"; version="1.44.0"; sha256="1g6chz14q0vpfr6x7pcv3icx3c50lppwcv231j1a3iirz30n8d6w"; depends=[gplots]; };
1620   miQC = derive2 { name="miQC"; version="1.4.0"; sha256="056sy6qk04gaqzcxvxpxskq7wzbgbfa8yclp2r0ry6i9qh7f8imm"; depends=[flexmix ggplot2 SingleCellExperiment]; };
1621   miRBaseConverter = derive2 { name="miRBaseConverter"; version="1.20.0"; sha256="0z2rjf95maqalqbdw2v5vhwhj7fjaijp74rmmxfkciwrja25xq57"; depends=[]; };
1622   miRLAB = derive2 { name="miRLAB"; version="1.26.0"; sha256="0dhdzmv02vg0wj32bs0rqpax1k1m9vvyn31i95c40nbh245hfjyk"; depends=[Category ctc dplyr energy entropy glmnet GOstats gplots Hmisc httr impute InvariantCausalPrediction limma org_Hs_eg_db pcalg RCurl stringr SummarizedExperiment TCGAbiolinks]; };
1623   miRNAmeConverter = derive2 { name="miRNAmeConverter"; version="1.24.0"; sha256="10v192wykdgbjbdbg5jc4y8zkyknqi35zx0gb39nby2ss5sh01k8"; depends=[AnnotationDbi DBI miRBaseVersions_db reshape2]; };
1624   miRNApath = derive2 { name="miRNApath"; version="1.56.0"; sha256="0993zpv9zl31r3x6ifi44syw8w6f6rcwrambvhfy7f22bifz66cl"; depends=[]; };
1625   miRNAtap = derive2 { name="miRNAtap"; version="1.30.0"; sha256="171c1zvc8z2hdzfkdm19w4qbi2pqsis0pjqyca4w1fr3gkrx519n"; depends=[AnnotationDbi DBI plyr RSQLite sqldf stringr]; };
1626   miRSM = derive2 { name="miRSM"; version="1.14.0"; sha256="0h13ig1mvciagyifzgi2paag2ypw5kwpjn7k2a1am6fgabywp5b5"; depends=[BiBitR BicARE biclust Biobase dbscan dynamicTreeCut energy fabia flashClust GFA GSEABase iBBiG igraph isa2 linkcomm MatrixCorrelation MCL mclust miRspongeR NMF org_Hs_eg_db PMA ppclust Rcpp rqubic s4vd SOMbrero subspace SummarizedExperiment WGCNA]; };
1627   miRcomp = derive2 { name="miRcomp"; version="1.26.0"; sha256="1vf3q3132bn0qxs047yh7bi3cq5rfirmyhs2f4m05kiwc3ipmc3a"; depends=[Biobase KernSmooth miRcompData]; };
1628   miRmine = derive2 { name="miRmine"; version="1.18.0"; sha256="089r950x369z3a47jxcankvq0aqv6jkpjqkssfmzg5cp55hxzrhc"; depends=[SummarizedExperiment]; };
1629   miRspongeR = derive2 { name="miRspongeR"; version="2.0.0"; sha256="0ri5afvazrq1zq5f8ddma3qx34ifr4bd3858g14rq28fia9khl1s"; depends=[clusterProfiler corpcor doParallel DOSE foreach igraph linkcomm MCL org_Hs_eg_db Rcpp ReactomePA SPONGE survival]; };
1630   mia = derive2 { name="mia"; version="1.4.0"; sha256="15pa9q6s9bq0xachfk122p7nz0bad438rfa0zx7zsm99kaygacmk"; depends=[ape BiocGenerics BiocParallel Biostrings DECIPHER decontam DelayedArray DelayedMatrixStats DirichletMultinomial dplyr IRanges MASS MultiAssayExperiment rlang S4Vectors scater scuttle SingleCellExperiment SummarizedExperiment tibble tidyr TreeSummarizedExperiment vegan]; };
1631   miaSim = derive2 { name="miaSim"; version="1.2.0"; sha256="0dc6nqmnj4phqqvs04hzcrl4w0w80j7cbmhlzdxp01rszzzr1yzw"; depends=[deSolve gtools MatrixGenerics poweRlaw S4Vectors SummarizedExperiment TreeSummarizedExperiment]; };
1632   miaViz = derive2 { name="miaViz"; version="1.4.0"; sha256="1bdbvbh8mkl1gk10zf11b8wqwwr1ybbd6r7dpgh4y35ayscpvdqn"; depends=[ape BiocGenerics BiocParallel DelayedArray DirichletMultinomial dplyr ggnewscale ggplot2 ggraph ggtree mia purrr rlang S4Vectors scater SummarizedExperiment tibble tidygraph tidyr tidytree TreeSummarizedExperiment viridis]; };
1633   microRNA = derive2 { name="microRNA"; version="1.54.0"; sha256="1bd38qxcd0lb44wgnns5jsn65b3mvgxfalfz7wpysv6sikmlagx4"; depends=[Biostrings]; };
1634   microbiome = derive2 { name="microbiome"; version="1.18.0"; sha256="1z9arkjp5xszlg07mzb4p163i74jfbd9p4gbwv5syivnpl040k12"; depends=[Biostrings compositions dplyr ggplot2 phyloseq reshape2 Rtsne scales tibble tidyr vegan]; };
1635   microbiomeDASim = derive2 { name="microbiomeDASim"; version="1.10.0"; sha256="05lj8ihx8cpx2casxbpyn7n3zwia0bmj0lyn9prqial56s0zmsaj"; depends=[Biobase ggplot2 MASS Matrix metagenomeSeq mvtnorm pbapply phyloseq tmvtnorm]; };
1636   microbiomeExplorer = derive2 { name="microbiomeExplorer"; version="1.6.1"; sha256="0sccij5f0h6gg3gi3qsirqc3v17qc6wv6rvh601rgn0zhbdf6hl7"; depends=[Biobase biomformat broom car DESeq2 dplyr DT forcats heatmaply knitr limma lubridate magrittr matrixStats metagenomeSeq plotly purrr RColorBrewer readr reshape2 rlang rmarkdown shiny shinycssloaders shinydashboard shinyjs shinyWidgets stringr tibble tidyr vegan]; };
1637   microbiomeMarker = derive2 { name="microbiomeMarker"; version="1.2.2"; sha256="0bd5a92na9hk2hpmqphpdhn24pk1p2gk5nsbslp8yk5c4161qxmk"; depends=[ALDEx2 ANCOMBC Biobase BiocGenerics BiocParallel biomformat Biostrings caret coin ComplexHeatmap DESeq2 dplyr edgeR ggplot2 ggsignif ggtree IRanges limma magrittr MASS metagenomeSeq multtest patchwork phyloseq plotROC pROC purrr rlang S4Vectors tibble tidyr tidytree vegan yaml]; };
1638   midasHLA = derive2 { name="midasHLA"; version="1.4.0"; sha256="1xvqrsp6rkcnr8fnjr9g62krwwshiy3xapxlmbi4bhm6605b0ccy"; depends=[assertthat broom dplyr formattable HardyWeinberg kableExtra knitr magrittr MultiAssayExperiment qdapTools rlang S4Vectors stringi SummarizedExperiment tibble]; };
1639   miloR = derive2 { name="miloR"; version="1.4.0"; sha256="1jz9p3grnczx0bpdw6j64x21in8zgm3qy19hmm296har2rx9m5zs"; depends=[BiocGenerics BiocNeighbors BiocParallel BiocSingular cowplot dplyr edgeR ggbeeswarm ggplot2 ggraph ggrepel gtools igraph irlba limma Matrix matrixStats patchwork RColorBrewer S4Vectors SingleCellExperiment stringr SummarizedExperiment tibble tidyr]; };
1640   mimager = derive2 { name="mimager"; version="1.20.0"; sha256="1iy1bghz3wqn80444h9aq81mz1pw7wcx0m6bjj33qxdzcr66jbgl"; depends=[affy affyPLM Biobase BiocGenerics DBI gtable oligo oligoClasses preprocessCore S4Vectors scales]; };
1641   mina = derive2 { name="mina"; version="1.4.0"; sha256="0csvsfld45cqcsnpprviggbb4lsqjsyz00iy02zmzi6kz2djhwil"; depends=[apcluster biganalytics bigmemory foreach ggplot2 Hmisc MCL parallelDist plyr Rcpp RcppArmadillo RcppParallel reshape2 RSpectra stringr]; };
1642   minet = derive2 { name="minet"; version="3.54.0"; sha256="0q6jw2jqkl9qynjpzaygz45c7dmx1l5y2d8s1illpcf87siawcam"; depends=[infotheo]; };
1643   minfi = derive2 { name="minfi"; version="1.42.0"; sha256="0255z7w5i5k01w8wn7jkb37h3q7m7vg0szqgk76h330yydnmkrq6"; depends=[beanplot Biobase BiocGenerics BiocParallel Biostrings bumphunter data_table DelayedArray DelayedMatrixStats genefilter GenomeInfoDb GenomicRanges GEOquery HDF5Array illuminaio IRanges lattice limma MASS mclust nlme nor1mix preprocessCore quadprog RColorBrewer reshape S4Vectors siggenes SummarizedExperiment]; };
1644   mirIntegrator = derive2 { name="mirIntegrator"; version="1.26.0"; sha256="1qgz9l4bpkgvahdm2vi0s9amakxw4zhjndc5k8d598vmwa35zjvf"; depends=[AnnotationDbi ggplot2 graph org_Hs_eg_db Rgraphviz ROntoTools]; };
1645   mirTarRnaSeq = derive2 { name="mirTarRnaSeq"; version="1.4.0"; sha256="10w0y3dflyyaaz8wk2p0pzv62pa2pq28aw0l5q8bvw8as0h6bpy1"; depends=[assertthat caTools corrplot data_table dplyr ggplot2 MASS pheatmap pscl purrr R_utils reshape2]; };
1646   missMethyl = derive2 { name="missMethyl"; version="1.30.0"; sha256="0ini4a6brxsmd1k73g7q671g0ddrbajz5gcgxk1dbny33fcixyl1"; depends=[AnnotationDbi BiasedUrn Biobase BiocGenerics GenomicRanges GO_db IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest IlluminaHumanMethylationEPICanno_ilm10b4_hg19 IlluminaHumanMethylationEPICmanifest IRanges limma methylumi minfi org_Hs_eg_db ruv S4Vectors statmod stringr SummarizedExperiment]; };
1647   missRows = derive2 { name="missRows"; version="1.16.0"; sha256="17hfm5jvdxb3hlv7hvq7m2a1s4bxzzxv1gakxk9nb26mcw01b29z"; depends=[ggplot2 gtools MultiAssayExperiment plyr S4Vectors]; };
1648   mistyR = derive2 { name="mistyR"; version="1.4.0"; sha256="1b8ndp5wrzy37gspw15s8xv78nk493xwi9wvjav8k4m6cyspgr0q"; depends=[assertthat caret deldir digest distances dplyr filelock furrr ggplot2 purrr R_utils ranger readr ridge rlang rlist stringr tibble tidyr withr]; };
1649   mitch = derive2 { name="mitch"; version="1.8.0"; sha256="0wxgrfnih9ygpyznlr6c8sgpy8ca6k9a5jcniiwy1c43cxarvx3p"; depends=[beeswarm echarts4r GGally ggplot2 gplots gridExtra knitr MASS plyr reshape2 rmarkdown]; };
1650   mitoClone2 = derive2 { name="mitoClone2"; version="1.2.0"; sha256="1w5083f5g9dz3lwhfminz4l6yrn7zjysbwlib75n53grkhgwkivz"; depends=[deepSNV GenomicRanges ggplot2 pheatmap reshape2 Rhtslib S4Vectors]; };
1651   mixOmics = derive2 { name="mixOmics"; version="6.20.0"; sha256="0fwc2w7frj0bjijzfckkxf7ipx1z13gw7907q4zr5qfl9mh127w7"; depends=[BiocParallel corpcor dplyr ellipse ggplot2 ggrepel gridExtra igraph lattice MASS matrixStats rARPACK RColorBrewer reshape2 tidyr]; };
1652   mnem = derive2 { name="mnem"; version="1.12.0"; sha256="04wc6za7vxq2sbspn69lszn6k83s7q0yfgns1052c2jqhfmxgp80"; depends=[cluster data_table e1071 flexclust ggplot2 graph lattice Linnorm matrixStats naturalsort Rcpp RcppEigen Rgraphviz snowfall tsne wesanderson]; };
1653   moanin = derive2 { name="moanin"; version="1.4.0"; sha256="0k3k554ncm4j3zkz67dlzdvii9m6k117gryj7lk9wrbsv1a0y7if"; depends=[ClusterR edgeR limma MASS matrixStats NMI reshape2 S4Vectors SummarizedExperiment topGO viridis zoo]; };
1654   mogsa = derive2 { name="mogsa"; version="1.30.0"; sha256="1yxnkwf6f356nm999b2ng54zb4cdi94pxhpwzj3f3rnr31jawvlp"; depends=[Biobase BiocGenerics cluster corpcor genefilter gplots graphite GSEABase svd]; };
1655   monaLisa = derive2 { name="monaLisa"; version="1.2.0"; sha256="0rqqkry54cz7id87znc59d8x49z8cwckmx30nxr6razmyl5bqmx6"; depends=[BiocGenerics BiocParallel Biostrings BSgenome circlize ComplexHeatmap GenomeInfoDb GenomicRanges glmnet IRanges S4Vectors stabs SummarizedExperiment TFBSTools vioplot XVector]; };
1656   monocle = derive2 { name="monocle"; version="2.24.1"; sha256="11g1wx0f1yzhg3x1aa3d5l7pqlzxj16s0gha21skxkgld8k2x8xn"; depends=[Biobase BiocGenerics biocViews cluster combinat DDRTree dplyr fastICA ggplot2 HSMMSingleCell igraph irlba leidenbase limma MASS Matrix matrixStats pheatmap plyr proxy qlcMatrix RANN Rcpp reshape2 Rtsne slam stringr tibble VGAM viridis]; };
1657   mosaics = derive2 { name="mosaics"; version="2.34.0"; sha256="196wz422a284akariq5iicknaqqcm50v63b57gsi2pzmv6qfmf5y"; depends=[GenomeInfoDb GenomicAlignments GenomicRanges IRanges lattice MASS Rcpp Rsamtools S4Vectors]; };
1658   mosbi = derive2 { name="mosbi"; version="1.2.0"; sha256="00l9kykr9n8ys3riw4pjqsdskf8klv9j62v0nr66z66646c1a7vp"; depends=[akmbiclust BH biclust fabia igraph isa2 QUBIC RColorBrewer Rcpp RcppParallel xml2]; };
1659   motifStack = derive2 { name="motifStack"; version="1.40.0"; sha256="0d2ihx73chczbv6f91n04qb372plrdv7k4qws8shyw1fmvb1rq0z"; depends=[ade4 Biostrings ggplot2 htmlwidgets TFBSTools XML]; };
1660   motifbreakR = derive2 { name="motifbreakR"; version="2.10.2"; sha256="0xmakbas2hhp0lknnfkdh73pm5z2dm4mrzixkx1sf69q7gq2g8gg"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges Gviz IRanges matrixStats MotifDb motifStack rtracklayer S4Vectors stringr SummarizedExperiment TFMPvalue VariantAnnotation]; };
1661   motifcounter = derive2 { name="motifcounter"; version="1.20.0"; sha256="06yy1ngf703ba6m9vs2jk3w1bds1s8hd4nlr3xrxfj3h7gs9dlak"; depends=[Biostrings]; };
1662   motifmatchr = derive2 { name="motifmatchr"; version="1.18.0"; sha256="1ssn00mxwk23zr5na0vcmxvm69i68f0ga0wqlv1nk2isg0wpv878"; depends=[Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp RcppArmadillo Rsamtools S4Vectors SummarizedExperiment TFBSTools]; };
1663   mpra = derive2 { name="mpra"; version="1.18.0"; sha256="0hbsaw39k7yryl1bf45kzsnwv479minydvxc6kd0sr9qsvlhn6dc"; depends=[BiocGenerics limma S4Vectors scales statmod SummarizedExperiment]; };
1664   msImpute = derive2 { name="msImpute"; version="1.6.0"; sha256="11sqb0sj3g224fnx1kkxy9j4r5ggnp09wm902dlgkgyqj7fywlnv"; depends=[data_table dplyr FNN limma matrixStats mvtnorm pdist reticulate scran softImpute tidyr]; };
1665   msPurity = derive2 { name="msPurity"; version="1.22.0"; sha256="0ag1x4smva0zn377s29ff16xpwhcwb7c4yhhl1wx5fvgg9p4kn0i"; depends=[DBI dbplyr doSNOW dplyr fastcluster foreach ggplot2 magrittr mzR plyr Rcpp reshape2 RSQLite stringr]; };
1666   msa = derive2 { name="msa"; version="1.28.0"; sha256="0vlhpv4hh3m2wb8bfr0hn0xfycd6x80zyjf275swx46mssdqwzyp"; depends=[BiocGenerics Biostrings IRanges Rcpp S4Vectors]; };
1667   msgbsR = derive2 { name="msgbsR"; version="1.20.0"; sha256="00r3kfimcjy02bb0i8przj45rfkdv3ddaxfjnmi1bb6j5l5sp17b"; depends=[BSgenome easyRNASeq edgeR GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 IRanges plyr R_utils Rsamtools S4Vectors SummarizedExperiment]; };
1668   msmsEDA = derive2 { name="msmsEDA"; version="1.34.0"; sha256="0jnaq9ar4mnf3pfhka9hvk61p51ny9jws49xi8z29dq288b42b42"; depends=[gplots MASS MSnbase RColorBrewer]; };
1669   msmsTests = derive2 { name="msmsTests"; version="1.34.0"; sha256="1wzdz0p9wmr243xkmymx9fwskafkyxgmlip4sd1fy2s06px7r0xi"; depends=[edgeR msmsEDA MSnbase qvalue]; };
1670   msqrob2 = derive2 { name="msqrob2"; version="1.4.0"; sha256="0023mippnmmpz0r4f2h5r8g7z3yvhm6vfvkwp9ndsl1r1rpv801w"; depends=[BiocParallel codetools limma lme4 MASS Matrix purrr QFeatures SummarizedExperiment]; };
1671   multiClust = derive2 { name="multiClust"; version="1.26.0"; sha256="0dkj479id0kz8afmaskgn5dnfg26q47qf7gwm9qq3r9n51hbglsb"; depends=[amap cluster ctc dendextend mclust survival]; };
1672   multiGSEA = derive2 { name="multiGSEA"; version="1.6.0"; sha256="0nsab0ip3qnic5q15kmv42d4wf0vys5n4d539x0jq1i3mi3zpfbb"; depends=[AnnotationDbi dplyr fgsea graphite magrittr metap rappdirs rlang]; };
1673   multiHiCcompare = derive2 { name="multiHiCcompare"; version="1.14.0"; sha256="0mff46n168bxrg8y5dj38p2dfb0mhxf6z55fnmpfc2kahfa5bkk7"; depends=[aggregation BiocParallel data_table dplyr edgeR GenomeInfoDb GenomeInfoDbData GenomicRanges HiCcompare pbapply pheatmap qqman]; };
1674   multiMiR = derive2 { name="multiMiR"; version="1.18.0"; sha256="1wlr21v8brl20cphbvr5vcfy3ilamb7a1sd261i7lkdj4if8bxfx"; depends=[AnnotationDbi BiocGenerics dplyr purrr RCurl tibble XML]; };
1675   multiOmicsViz = derive2 { name="multiOmicsViz"; version="1.20.0"; sha256="0cbz32ma935ci4aq83dq55ks66v7pz9rpaqfjvkd9gz3c5s88p16"; depends=[doParallel foreach SummarizedExperiment]; };
1676   multiSight = derive2 { name="multiSight"; version="1.4.0"; sha256="1nkx92kyyimgz2jm4dl2izir0z3qbf9fibgxr5r9j3l3zjwbbd08"; depends=[anyLib biosigner caret clusterProfiler config DESeq2 dplyr DT easyPubMed enrichplot ggnewscale golem htmltools igraph infotheo metap mixOmics networkD3 ppcor R6 ReactomePA rmarkdown rWikiPathways shiny shinydashboard stringr]; };
1677   multicrispr = derive2 { name="multicrispr"; version="1.6.0"; sha256="0smljmmwlkawbd4hdwgzvl25zynij4ssn4fjdhkgrmszsq79wscy"; depends=[assertive BiocGenerics Biostrings BSgenome CRISPRseek data_table GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 karyoploteR magrittr plyranges Rbowtie reticulate rtracklayer stringi tidyr tidyselect]; };
1678   multiscan = derive2 { name="multiscan"; version="1.56.0"; sha256="0wxpm0np4721nw2gz4db4a1wdi06pnnziyj0mwkwpsll7mgz337p"; depends=[Biobase]; };
1679   multtest = derive2 { name="multtest"; version="2.52.0"; sha256="037wcmwk1wvhjxgmlvnk289pkwishi1753ajkmy9x14xlmldix82"; depends=[Biobase BiocGenerics MASS survival]; };
1680   mumosa = derive2 { name="mumosa"; version="1.4.0"; sha256="1zrbajjfjq8mp6qq10xfrq2m2yrnda37s2aba32dwdk1gpkxx9g4"; depends=[batchelor beachmat BiocGenerics BiocNeighbors BiocParallel BiocSingular DelayedArray DelayedMatrixStats igraph IRanges Matrix metapod S4Vectors ScaledMatrix scran scuttle SingleCellExperiment SummarizedExperiment uwot]; };
1681   muscat = derive2 { name="muscat"; version="1.10.1"; sha256="1j3zkhqgza92vdykb1yia1jjwsdqra6q9c0jk6p5p2x0778xqgfd"; depends=[BiocParallel blme ComplexHeatmap data_table DESeq2 dplyr edgeR ggplot2 glmmTMB limma lme4 lmerTest Matrix matrixStats progress purrr S4Vectors scales scater sctransform scuttle SingleCellExperiment SummarizedExperiment variancePartition viridis]; };
1682   muscle = derive2 { name="muscle"; version="3.38.0"; sha256="16qfnf02lmfk1cwwql5airkpv7c90lvpyjjrwicid55gqhajfzhx"; depends=[Biostrings]; };
1683   musicatk = derive2 { name="musicatk"; version="1.6.0"; sha256="1j3402ywcma83zxbhwlazr0s57c8b11xzg41qfxc6k2dngv3h06z"; depends=[Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 BSgenome_Hsapiens_UCSC_hg38 BSgenome_Mmusculus_UCSC_mm10 BSgenome_Mmusculus_UCSC_mm9 cluster ComplexHeatmap cowplot data_table decompTumor2Sig deconstructSigs dplyr factoextra GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 ggrepel gridExtra gtools IRanges maftools magrittr MASS matrixTests MCMCprecision NMF philentropy plotly rlang S4Vectors shiny shinyalert shinyBS shinybusy shinydashboard shinyjqui shinyjs sortable stringi stringr SummarizedExperiment TCGAbiolinks tibble tidyr topicmodels TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene uwot VariantAnnotation withr]; };
1684   mygene = derive2 { name="mygene"; version="1.32.0"; sha256="0j1cwz95hx2wl6mf6kycrw0xlsi4j6s7y4jjm87dq52dnwnh8svy"; depends=[GenomicFeatures Hmisc httr jsonlite plyr S4Vectors sqldf]; };
1685   myvariant = derive2 { name="myvariant"; version="1.26.0"; sha256="096zkpmllf58x3pz571h0y2v1klpw82xs6ffgg78hz3kayxbyqr9"; depends=[GenomeInfoDb Hmisc httr jsonlite magrittr plyr S4Vectors VariantAnnotation]; };
1686   mzID = derive2 { name="mzID"; version="1.34.0"; sha256="1q1aqyya9nd494s7m3rdaf3kixipdrwbj825g40kdljwrg85y961"; depends=[doParallel foreach iterators plyr ProtGenerics XML]; };
1687   mzR = derive2 { name="mzR"; version="2.30.0"; sha256="1dqa03hb42kbqfg15ksijdkyf9pr54gcl3in4mzjkld5sdi8ncds"; depends=[Biobase BiocGenerics ncdf4 ProtGenerics Rcpp Rhdf5lib]; };
1688   nanotatoR = derive2 { name="nanotatoR"; version="1.12.0"; sha256="13r462fn6mfqknvizfbsim9dic6zw2wznmdhzwfwiax4b1ccjkk0"; depends=[AnnotationDbi curl dplyr GenomicRanges hash httr knitr openxlsx org_Hs_eg_db rentrez rlang stringr testthat tidyverse VarfromPDB XML XML2R]; };
1689   ncGTW = derive2 { name="ncGTW"; version="1.10.0"; sha256="1xcwh6xd0jhiq40rvswzngddndmvday0c8rni0sq43y9ng901jnd"; depends=[BiocParallel Rcpp xcms]; };
1690   ncRNAtools = derive2 { name="ncRNAtools"; version="1.6.0"; sha256="10ajjvhaagvgjcjfjkgviwdrk4962gb35lknwpab9mzdvgkwjb95"; depends=[GenomicRanges ggplot2 httr IRanges S4Vectors xml2]; };
1691   ncdfFlow = derive2 { name="ncdfFlow"; version="2.42.1"; sha256="0759xvkp22dnbhq5wpgvpk8p61w0d50r5jrbh9n7sj8sga4lvvv7"; depends=[BH Biobase BiocGenerics flowCore Rcpp RcppArmadillo Rhdf5lib zlibbioc]; };
1692   ndexr = derive2 { name="ndexr"; version="1.18.0"; sha256="0l6bfzkrd8n719fqll4v202dm19hgdn9l8n56l8bykfsa3sff0lj"; depends=[httr igraph jsonlite plyr RCX tidyr]; };
1693   nearBynding = derive2 { name="nearBynding"; version="1.6.0"; sha256="0gf0gm9aqxxhblhfjab61j0bmyh2lij9bcpk2jvb55gmdaqc1vxg"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicRanges ggplot2 gplots magrittr matrixStats plyranges R_utils rlang Rsamtools rtracklayer S4Vectors transport TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; };
1694   nempi = derive2 { name="nempi"; version="1.4.0"; sha256="1hl1znxwdhsixv1cxq04nzsj982hjhpd5jc3pl6xdcivr0jbb405"; depends=[e1071 epiNEM matrixStats mnem naturalsort nnet randomForest]; };
1695   netDx = derive2 { name="netDx"; version="1.8.0"; sha256="0v6760mghq6ynmzfll16gc2q7c4l7gqlxilx6np6aha2qcwgr4cl"; depends=[bigmemory BiocFileCache combinat doParallel foreach GenomeInfoDb GenomicRanges ggplot2 glmnet httr igraph IRanges MultiAssayExperiment plotrix pracma rappdirs RColorBrewer reshape2 ROCR Rtsne S4Vectors]; };
1696   netOmics = derive2 { name="netOmics"; version="1.2.0"; sha256="11yjlp1siq80492sywpkwghcsnqmwvmx0rbw9wm58j61qdlywcb5"; depends=[AnnotationDbi dplyr ggplot2 GO_db gprofiler2 igraph magrittr minet purrr RandomWalkRestartMH tibble tidyr]; };
1697   netSmooth = derive2 { name="netSmooth"; version="1.16.0"; sha256="0jzid8svq21i5kbc3c908dqmf0i4mlsnfa4bq7avp9ynv195nc4q"; depends=[cluster clusterExperiment data_table DelayedArray entropy HDF5Array Matrix scater SingleCellExperiment SummarizedExperiment]; };
1698   netZooR = derive2 { name="netZooR"; version="1.0.0"; sha256="03a1i508hm8i86nnlj1i4hz83fz1krp3qfbiyv2yhrdq3f5ra1yr"; depends=[AnnotationDbi assertthat Biobase data_table doParallel dplyr foreach ggdendro ggplot2 GO_db GOstats gplots igraph MASS Matrix matrixStats nnet org_Hs_eg_db pandaR penalized RCy3 reshape reshape2 reticulate STRINGdb tidyr vegan viridisLite yarn]; };
1699   netbiov = derive2 { name="netbiov"; version="1.30.0"; sha256="1c63ywyp7zcszrrkyx3q4xnkzij17km675825gcmfgk3h0g96lx7"; depends=[igraph]; };
1700   netboost = derive2 { name="netboost"; version="2.4.1"; sha256="11rayvp15ysk2fkpsw3w3ivkxfk8dznz6zdrnbmfhv1814mbfvk7"; depends=[colorspace dynamicTreeCut impute R_utils Rcpp RcppParallel WGCNA]; };
1701   netboxr = derive2 { name="netboxr"; version="1.7.1"; sha256="06pc0qw275r1ksj07hvkfvcvxl9dg539wja07j7lbqvnp6hzl0xd"; depends=[clusterProfiler data_table DT gplots igraph jsonlite plyr RColorBrewer]; };
1702   nethet = derive2 { name="nethet"; version="1.28.0"; sha256="1c6is3w1saw5i2akmxf6272qlbxpf40ayfh19jialmmqsdhik01z"; depends=[CompQuadForm GeneNet ggm ggplot2 glasso glmnet GSA huge ICSNP limma mclust multtest mvtnorm network]; };
1703   netprioR = derive2 { name="netprioR"; version="1.22.0"; sha256="0wbhcr0qkcsnakfpx49hkjhwbmrc9n76rbs75pc3da4z9wv89qg3"; depends=[doParallel dplyr foreach ggplot2 gridExtra Matrix pROC sparseMVN]; };
1704   netresponse = derive2 { name="netresponse"; version="1.56.1"; sha256="0vzvmbb01f4dqy6g9yvwl078zmrnvzgdx12d91k43cw289z3ykvz"; depends=[BiocStyle ggplot2 graph igraph mclust minet plyr qvalue RColorBrewer reshape2 Rgraphviz rmarkdown]; };
1705   networkBMA = derive2 { name="networkBMA"; version="2.35.0"; sha256="0xa0b977apbr6p9kqk38582af635kp99csj32bsn2bf8pjsmd4d2"; depends=[BH BMA leaps Rcpp RcppArmadillo RcppEigen]; };
1706   ngsReports = derive2 { name="ngsReports"; version="1.12.4"; sha256="16nc7yl9gaxj7j3dggnd02jn157nndjgxpbvjwa78gxag1lp5fld"; depends=[BiocGenerics Biostrings checkmate dplyr DT forcats ggdendro ggplot2 lifecycle lubridate pander plotly readr reshape2 rmarkdown scales stringr tibble tidyr tidyselect zoo]; };
1707   nnNorm = derive2 { name="nnNorm"; version="2.60.0"; sha256="09xr73xpfzj0w9wx23bqzkcnxlvgc50lazbfpd5phl0ravsl5spl"; depends=[marray nnet]; };
1708   nnSVG = derive2 { name="nnSVG"; version="1.0.4"; sha256="033210n4i52kdm2qv6m3f6pkmb0ll7lwanwn2nz9kzig55mgmn23"; depends=[BiocParallel BRISC Matrix matrixStats SingleCellExperiment SpatialExperiment SummarizedExperiment]; };
1709   nondetects = derive2 { name="nondetects"; version="2.26.0"; sha256="1y31pzsihqmlhprdgl9xwspbfj2k9zgp15d905v6y9zjzjdxfdhf"; depends=[arm Biobase HTqPCR limma mvtnorm]; };
1710   normalize450K = derive2 { name="normalize450K"; version="1.24.0"; sha256="03cmxljvcfmzkvsrzhc4si17g68fcb8877pzf6960cvbhv00d4ys"; depends=[Biobase illuminaio quadprog]; };
1711   normr = derive2 { name="normr"; version="1.22.0"; sha256="1v1x54k8kphq3xrnv5m2ya4viyg22msgviv6hg6qg8fb4hqp9ich"; depends=[bamsignals GenomeInfoDb GenomicRanges IRanges qvalue Rcpp rtracklayer]; };
1712   npGSEA = derive2 { name="npGSEA"; version="1.32.0"; sha256="05l9dd4w013k9m6yckidal2q2b991nkir78543rzjh81x9kqz229"; depends=[Biobase BiocGenerics GSEABase]; };
1713   nuCpos = derive2 { name="nuCpos"; version="1.14.0"; sha256="1lx3d1iadhah35hc30wmmki8yxqqw5qs0h0h1wjd6qyg0hyxskq7"; depends=[]; };
1714   nucleR = derive2 { name="nucleR"; version="2.28.0"; sha256="1878hzdffsz4hsghk9y9m8bdqcy75z5hipj264dawvp89lm57sfg"; depends=[Biobase BiocGenerics Biostrings dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges magrittr Rsamtools S4Vectors ShortRead]; };
1715   nucleoSim = derive2 { name="nucleoSim"; version="1.24.0"; sha256="0s81vjca93afz9ysjz16pkdsn7x206lr7mbj9lnrllffhy4n4n59"; depends=[IRanges S4Vectors]; };
1716   nullranges = derive2 { name="nullranges"; version="1.2.0"; sha256="00zx8xq8hz2pz3x6x5lmq78nvrzpzmkjwm364d9qswjvcxdgmcvb"; depends=[data_table GenomeInfoDb GenomicRanges ggplot2 ggridges InteractionSet IRanges ks plyranges progress rlang S4Vectors scales speedglm]; };
1717   occugene = derive2 { name="occugene"; version="1.56.0"; sha256="1cbi3h0m48vdy1jd5zqmwvrxgc7dn9jxadg1drc3sfbba5y85bsh"; depends=[]; };
1718   odseq = derive2 { name="odseq"; version="1.24.0"; sha256="1j8fv35z3wlc6y5ms34fd0z1r7w9hkr6fzb5rxx2ylc6nfgcsymv"; depends=[kebabs mclust msa]; };
1719   oligo = derive2 { name="oligo"; version="1.60.0"; sha256="0y7j96rafm9b85sxq2483i73685i3j67lk33fn8nfcav6lmsv5vy"; depends=[affxparser affyio Biobase BiocGenerics Biostrings DBI ff oligoClasses preprocessCore RSQLite zlibbioc]; };
1720   oligoClasses = derive2 { name="oligoClasses"; version="1.58.0"; sha256="1m4x50gl1fm5waa531v7ml0q229q65qn9cgiwnvjg721fvra7mdk"; depends=[affyio Biobase BiocGenerics BiocManager Biostrings DBI ff foreach GenomicRanges IRanges RSQLite S4Vectors SummarizedExperiment]; };
1721   omicRexposome = derive2 { name="omicRexposome"; version="1.18.0"; sha256="0gpd1hqniz6m0q1r6ijbr9kj7j9k4lzxqw9r906hlrh3jkwdyw21"; depends=[Biobase ggplot2 ggrepel gridExtra isva limma MultiDataSet omicade4 PMA rexposome SmartSVA stringr SummarizedExperiment sva]; };
1722   omicade4 = derive2 { name="omicade4"; version="1.36.0"; sha256="1l7w3sczsimg640klq8navgdcwjj090wjqd40n4mw76pny2xj2lj"; depends=[ade4 Biobase made4]; };
1723   omicplotR = derive2 { name="omicplotR"; version="1.16.0"; sha256="0sqh8nympgrig01x4j302xsya10sbrpn75sjwy16srxxiagkrlzk"; depends=[ALDEx2 compositions DT jsonlite knitr matrixStats rmarkdown shiny vegan zCompositions]; };
1724   omicsPrint = derive2 { name="omicsPrint"; version="1.16.0"; sha256="08gv2qzv7a1jsyqqm802w3awymnnyyy84ic56wzhcdimhqgs0an3"; depends=[MASS matrixStats MultiAssayExperiment RaggedExperiment SummarizedExperiment]; };
1725   omicsViewer = derive2 { name="omicsViewer"; version="1.0.1"; sha256="1dndhjwi7n0syp6dq84008df12f628pr0h880qvgfgzfy63g0vnz"; depends=[beeswarm Biobase curl DT fastmatch fgsea flatxml ggplot2 ggseqlogo htmlwidgets httr Matrix matrixStats networkD3 openxlsx plotly psych RColorBrewer reshape2 RSQLite S4Vectors shiny shinybusy shinycssloaders shinyjs shinythemes shinyWidgets stringr SummarizedExperiment survival survminer]; };
1726   ompBAM = derive2 { name="ompBAM"; version="1.0.0"; sha256="0pjkp6vhnnbdflgg15f9cvlx8cdmbd3y09d7i1dk421z28jlwzrs"; depends=[Rcpp zlibbioc]; };
1727   oncomix = derive2 { name="oncomix"; version="1.18.0"; sha256="0yj0p2vkph8qy1hhfv8nc15ac0z506xazzsmq6a7pvz5yqw7hxqc"; depends=[ggplot2 ggrepel mclust RColorBrewer SummarizedExperiment]; };
1728   oneSENSE = derive2 { name="oneSENSE"; version="1.18.0"; sha256="189zhz5glffh0q368mj8z7q7kvdpx2yl7xvwz5q20ckqj3xyyf10"; depends=[flowCore gplots plotly Rtsne scatterplot3d shiny shinyFiles webshot]; };
1729   onlineFDR = derive2 { name="onlineFDR"; version="2.4.0"; sha256="0l2sc6kzwg1y68b4hh8xq075kkb1iz6l5ns417z36hwzb5sl0jxr"; depends=[dplyr ggplot2 progress Rcpp RcppProgress tidyr]; };
1730   ontoProc = derive2 { name="ontoProc"; version="1.18.0"; sha256="01wc7yk44zkylkx1blh7a299696pvf2smya728v3f8axvk8n5hyp"; depends=[AnnotationDbi AnnotationHub Biobase BiocFileCache dplyr DT graph igraph magrittr ontologyIndex ontologyPlot Rgraphviz S4Vectors shiny]; };
1731   openCyto = derive2 { name="openCyto"; version="2.8.4"; sha256="0fa3hbbrjw458dhmxdjypcjgyxmphp9kdr3r62qqf803i4wsxfk0"; depends=[Biobase BiocGenerics clue data_table flowClust flowCore flowStats flowViz flowWorkspace graph gtools ks lattice MASS ncdfFlow plyr R_utils RBGL RColorBrewer Rcpp rrcov]; };
1732   openPrimeR = derive2 { name="openPrimeR"; version="1.18.0"; sha256="1lxs08x6xw80rw6q15qda1668yil53pwcwcm1kryibjx78rng3mf"; depends=[ape BiocGenerics Biostrings DECIPHER digest distr distrEx dplyr fitdistrplus foreach GenomicRanges ggplot2 Hmisc IRanges lpSolveAPI magrittr openxlsx plyr RColorBrewer reshape2 S4Vectors scales seqinr stringdist stringr uniqtag XML]; };
1733   openPrimeRui = derive2 { name="openPrimeRui"; version="1.18.0"; sha256="1gkqka5i3advring4ajhkad183j27lik605hhnww0fm8n7qmgz7l"; depends=[DT openPrimeR rmarkdown shiny shinyBS shinyjs]; };
1734   oposSOM = derive2 { name="oposSOM"; version="2.14.0"; sha256="0fglnzab8p2za8d3d3cpia2rai64jyra1yazkfk718bin6nx2bpg"; depends=[ape Biobase biomaRt fastICA fdrtool graph igraph pixmap png Rcpp RcppParallel RCurl scatterplot3d tsne XML]; };
1735   oppar = derive2 { name="oppar"; version="1.24.0"; sha256="0p5r98v5f969hllm0ywqfi67gaxlgxba506qvlq2rd870bv5bgmk"; depends=[Biobase GSEABase GSVA]; };
1736   oppti = derive2 { name="oppti"; version="1.10.0"; sha256="0rwgyq4qx4bgz1rl6z93yiadpslnj8v1aj84pdhjdd7gcn0xyc4g"; depends=[devtools ggplot2 knitr limma parallelDist pheatmap RColorBrewer reshape]; };
1737   optimalFlow = derive2 { name="optimalFlow"; version="1.8.0"; sha256="0h6a1cv7gc9pbahn3jpxayxqn9gl9qdygvmppz0za4bmi7jsc03i"; depends=[dbscan doParallel dplyr ellipse flowMeans foreach optimalFlowData randomForest Rfast rgl rlang robustbase transport]; };
1738   orthogene = derive2 { name="orthogene"; version="1.2.1"; sha256="1ckzzqglidwb8kmmd93aq2fm8ip95ac3hrf7f8kq27v2z62ykmjk"; depends=[babelgene data_table DelayedArray DelayedMatrixStats dplyr ggplot2 ggpubr ggtree gprofiler2 grr homologene jsonlite Matrix patchwork repmis]; };
1739   pRoloc = derive2 { name="pRoloc"; version="1.36.0"; sha256="11nznxcw06v9z5l9zlkqqpqzb5iaabvfbww0d0y1blgzhf06mfpz"; depends=[Biobase BiocGenerics BiocParallel biomaRt caret class coda dendextend e1071 FNN ggplot2 gtools hexbin kernlab knitr LaplacesDemon lattice MASS mclust mixtools MLInterfaces MSnbase mvtnorm nnet plyr proxy randomForest RColorBrewer Rcpp RcppArmadillo sampling scales]; };
1740   pRolocGUI = derive2 { name="pRolocGUI"; version="2.6.0"; sha256="0j48nky1gl1jggpikq60zxcnd4l3ka7l7wwsg0mn3i99ak1x55xh"; depends=[Biobase BiocGenerics colorspace colourpicker dplyr DT ggplot2 MSnbase pRoloc scales shiny shinydashboard shinydashboardPlus shinyhelper shinyjs shinyWidgets]; };
1741   packFinder = derive2 { name="packFinder"; version="1.8.0"; sha256="0swvwh8wx871yppzi5mail4hrm8cvfyic4yqnwr32sihipsr9sgq"; depends=[ape Biostrings GenomicRanges IRanges kmer S4Vectors]; };
1742   padma = derive2 { name="padma"; version="1.6.0"; sha256="1rp0l035dcqb3vr6rh2q8x9169abcv02g71a6gvbzrs6zipp1183"; depends=[FactoMineR MultiAssayExperiment S4Vectors SummarizedExperiment]; };
1743   pageRank = derive2 { name="pageRank"; version="1.6.0"; sha256="0ad9c6zrfajlkw0d1xhk2b4lggaj37iw92n2lj9qmw9jcdbpqlnq"; depends=[GenomicRanges igraph motifmatchr]; };
1744   paircompviz = derive2 { name="paircompviz"; version="1.34.0"; sha256="00fqwm8f2aw8lif3hpf7lh68b1gyffi18c97q2y4nh97zf94da0i"; depends=[Rgraphviz]; };
1745   pairkat = derive2 { name="pairkat"; version="1.2.0"; sha256="05ci3mbbfri30xxhi7ssj1wc35qbl1q5aaybqvfk9s8l14ax0izy"; depends=[CompQuadForm data_table igraph KEGGREST magrittr SummarizedExperiment tibble]; };
1746   pandaR = derive2 { name="pandaR"; version="1.28.0"; sha256="1l0iz2pyw728vi6smc1gk1sxjczfgdfv805fdc8bby0qapl7v85r"; depends=[Biobase BiocGenerics ggplot2 hexbin igraph matrixStats plyr reshape RUnit]; };
1747   panelcn_mops = derive2 { name="panelcn.mops"; version="1.18.0"; sha256="1pi6xva3s7avcdayqhh5xyrv00dv2gkv4pwxp3f5k8biz2i5qn0x"; depends=[cn_mops GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors]; };
1748   panp = derive2 { name="panp"; version="1.66.0"; sha256="0bvl3jrsqvf0955mjzqn4nzj3anhhhhn6id57icsmjq15gviajzl"; depends=[affy Biobase]; };
1749   pareg = derive2 { name="pareg"; version="1.0.0"; sha256="1kzs349cbz81ba1jm7vjqypn1041l5p8qrg9r596b9d902hiqfjg"; depends=[DOSE dplyr furrr ggplot2 ggraph glue igraph keras magrittr Matrix matrixLaplacian nloptr progress proxy purrr reticulate rlang shadowtext stringr tensorflow tfprobability tibble tidygraph tidyr]; };
1750   parglms = derive2 { name="parglms"; version="1.28.0"; sha256="0h9bd3rv2cbn8rfv4d1c2ah0pp7bsiziyj7zwslgwa2ycqrarpqa"; depends=[BatchJobs BiocGenerics doParallel foreach]; };
1751   parody = derive2 { name="parody"; version="1.54.0"; sha256="0g974q140byiniixgsq717vz66wrsfwhrv76w0c4by23kvmkyrz7"; depends=[]; };
1752   pathRender = derive2 { name="pathRender"; version="1.64.0"; sha256="07mad39y9l4c1mb66psi5d9vqd7lwkin3psrszqhl5kd6fi6z3in"; depends=[AnnotationDbi cMAP graph RColorBrewer Rgraphviz]; };
1753   pathVar = derive2 { name="pathVar"; version="1.26.0"; sha256="1q7dryn1h98cfr03xc7bm84rc0xsdhpc1mizd169cyck0jj70siq"; depends=[data_table EMT ggplot2 gridExtra Matching mclust]; };
1754   pathifier = derive2 { name="pathifier"; version="1.34.0"; sha256="0aanvd9sgicnbl87wwfr7sdh6bjy6knhcx1x1d5g34pqbzkwfzwq"; depends=[princurve R_oo]; };
1755   pathview = derive2 { name="pathview"; version="1.36.1"; sha256="11g4zhy4qfq0gmy588334f7s2w1acs2dz9kimax5ya2b8jjibk71"; depends=[AnnotationDbi graph KEGGgraph KEGGREST org_Hs_eg_db png Rgraphviz XML]; };
1756   pathwayPCA = derive2 { name="pathwayPCA"; version="1.12.0"; sha256="13ny1z0i7zywpk8lk8qpbj2zpgznq3l4q1vyg1r0rc265p8c3031"; depends=[lars survival]; };
1757   paxtoolsr = derive2 { name="paxtoolsr"; version="1.30.0"; sha256="0kzszgk69078kg5v6blnr1bbhhin8rx62s40xx1abm6pm0k87kli"; depends=[httr igraph jsonlite plyr R_utils rappdirs readr rJava rjson XML]; };
1758   pcaExplorer = derive2 { name="pcaExplorer"; version="2.22.0"; sha256="0xkafpi6y5n8hljdaj183hd5z4ik7lpbklg2cbx1hwfz4n4hh1bl"; depends=[AnnotationDbi base64enc biomaRt DESeq2 DT genefilter GenomicRanges ggplot2 ggrepel GO_db GOstats heatmaply IRanges knitr limma NMF pheatmap plotly plyr rmarkdown S4Vectors scales shiny shinyAce shinyBS shinydashboard SummarizedExperiment threejs tidyr topGO]; };
1759   pcaMethods = derive2 { name="pcaMethods"; version="1.88.0"; sha256="1087sl7y707zld7zpf3ly51gnmdp93vn90dwa5440v7qawvg2h9b"; depends=[Biobase BiocGenerics MASS Rcpp]; };
1760   pcxn = derive2 { name="pcxn"; version="2.18.0"; sha256="08w3b8ngbrv7nhc6ybmzwkahk89ixxq67f9zjwinajw3svfi7yw8"; depends=[pcxnData pheatmap]; };
1761   pdInfoBuilder = derive2 { name="pdInfoBuilder"; version="1.60.0"; sha256="14lhkhkgslwls86p7y04k0vjg5yqd2js9j4hnvkn89zydv7r29r0"; depends=[affxparser Biobase BiocGenerics Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; };
1762   peakPantheR = derive2 { name="peakPantheR"; version="1.10.0"; sha256="0ais6q8vl16x9prf8xsairrhjaaq246zw5n90g2zmh0nnb6674hw"; depends=[bslib doParallel DT foreach ggplot2 gridExtra minpack_lm MSnbase mzR pracma scales shiny shinycssloaders stringr XML]; };
1763   peco = derive2 { name="peco"; version="1.8.0"; sha256="12mq87cyndl7zgwn155vbd8lh3yil9l6slmyjin971hlw53qvikn"; depends=[assertthat circular conicfit doParallel foreach genlasso scater SingleCellExperiment SummarizedExperiment]; };
1764   pengls = derive2 { name="pengls"; version="1.2.0"; sha256="0zk8f9yzxc1mnyyv1g2rfjlcc0hz2dgavjrlgfqajzss4m5dilqs"; depends=[BiocParallel glmnet nlme]; };
1765   pepStat = derive2 { name="pepStat"; version="1.30.0"; sha256="1fj32n61zxm7ls7qk0ncpmm1g2xpf60i0310axniyxlxcbyds0b3"; depends=[Biobase data_table fields GenomicRanges ggplot2 IRanges limma plyr]; };
1766   pepXMLTab = derive2 { name="pepXMLTab"; version="1.30.0"; sha256="11fnm35cbnwy9l09mci9846xcv2mxvknv9hb1bs1i8381q8ysvws"; depends=[XML]; };
1767   periodicDNA = derive2 { name="periodicDNA"; version="1.6.0"; sha256="0ak5i5pqhjyz99lhbiqxjymsars3pajfwd2snzlyc7xd1fjxg06s"; depends=[BiocParallel Biostrings BSgenome cowplot GenomeInfoDb GenomicRanges ggplot2 IRanges magrittr rtracklayer S4Vectors zoo]; };
1768   pgca = derive2 { name="pgca"; version="1.20.0"; sha256="1mrn054flab2v18za40fhfxn691g3gq93p1ciyxfakbyb89ryi5x"; depends=[]; };
1769   phantasus = derive2 { name="phantasus"; version="1.16.2"; sha256="0r860hs25higr4crq1jf0s9a8pzrxbswdmz2zyx5bx0p1b78m6si"; depends=[AnnotationDbi assertthat Biobase ccaPP curl data_table DESeq2 fgsea GEOquery ggplot2 gtable htmltools httpuv httr jsonlite limma Matrix opencpu pheatmap protolite rhdf5 Rook scales stringr svglite]; };
1770   phemd = derive2 { name="phemd"; version="1.12.0"; sha256="0nn0qgb0rz4j2xsjq0wydjhg5pmf2ra67rm9fdm4m1izmzwa0nhs"; depends=[Biobase BiocGenerics cluster cowplot destiny ggplot2 igraph maptree monocle phateR pheatmap pracma RANN RColorBrewer reticulate Rtsne S4Vectors scatterplot3d Seurat SingleCellExperiment SummarizedExperiment transport VGAM]; };
1771   phenoTest = derive2 { name="phenoTest"; version="1.44.0"; sha256="0dm3h7ax83j3izcij7cdf8wg9cl4409vwnmzfbymf33y2l2z8csx"; depends=[annotate AnnotationDbi Biobase biomaRt BMA Category ellipse genefilter ggplot2 gplots GSEABase Heatplus hgu133a_db Hmisc hopach limma mgcv survival xtable]; };
1772   phenopath = derive2 { name="phenopath"; version="1.20.0"; sha256="114v90my05q89bgyjgl2ix62h3l4xcy96j2fncmpa89l7zax9fr2"; depends=[dplyr ggplot2 Rcpp SummarizedExperiment tibble tidyr]; };
1773   philr = derive2 { name="philr"; version="1.22.0"; sha256="1mj6mzl74dbpdhc5laiax5h20i0rh9n2rkip7vgwr5qc26a16kcw"; depends=[ape ggplot2 ggtree phangorn tidyr]; };
1774   phosphonormalizer = derive2 { name="phosphonormalizer"; version="1.20.0"; sha256="0mcgxwg3igji0a3nwhjby10yy6p1hlh1pfcx973vi7fy3w5inm19"; depends=[matrixStats plyr]; };
1775   phyloseq = derive2 { name="phyloseq"; version="1.40.0"; sha256="0hcyv4ziyaw74mc9vf7bad3q9izi9p0whg3hspbs6w8b3hp34y2k"; depends=[ade4 ape Biobase BiocGenerics biomformat Biostrings cluster data_table foreach ggplot2 igraph multtest plyr reshape2 scales vegan]; };
1776   piano = derive2 { name="piano"; version="2.12.1"; sha256="0my7pkd565mkx8b8v008yayh5a0wkp25hwy7fpslygs5ycmr872h"; depends=[Biobase BiocGenerics DT fgsea gplots htmlwidgets igraph marray relations scales shiny shinydashboard shinyjs visNetwork]; };
1777   pickgene = derive2 { name="pickgene"; version="1.68.0"; sha256="1zdiaw0n72sc98qz5fl5xq34s1sqjmp45p2m8m882cv17d81fdgm"; depends=[MASS]; };
1778   pipeComp = derive2 { name="pipeComp"; version="1.6.0"; sha256="0m3kp996x248jvcy3d2d8hfw53vzj24k1jkcdw02lcc8p0rcy0zm"; depends=[aricode BiocParallel circlize clue cluster ComplexHeatmap cowplot dplyr ggplot2 intrinsicDimension knitr Matrix matrixStats randomcoloR RColorBrewer reshape2 Rtsne S4Vectors scales scater scran Seurat SingleCellExperiment SummarizedExperiment uwot viridisLite]; };
1779   pipeFrame = derive2 { name="pipeFrame"; version="1.12.0"; sha256="13xxkk7ja7f7kzn5pxcikdczc5y8f42l4xx3qbw837jxl5sxk2fy"; depends=[Biostrings BSgenome digest GenomeInfoDb magrittr rmarkdown visNetwork]; };
1780   pkgDepTools = derive2 { name="pkgDepTools"; version="1.62.0"; sha256="1fpdlvivarilkbd5zanqpss1irr3a1y10qqj2k8zmh3rxw6gd99g"; depends=[graph RBGL]; };
1781   planet = derive2 { name="planet"; version="1.4.0"; sha256="0gqcflfn3l4dia6bi9jbadmhhp1flh3fss8glnlqxwgh4znlgj2x"; depends=[dplyr magrittr tibble]; };
1782   plethy = derive2 { name="plethy"; version="1.34.0"; sha256="1lj31iizb042zxqr5hma25p0clwc5d034bdbrwcpsfi6gq50ca42"; depends=[Biobase BiocGenerics DBI ggplot2 IRanges plyr RColorBrewer reshape2 RSQLite S4Vectors Streamer]; };
1783   plgem = derive2 { name="plgem"; version="1.68.0"; sha256="07zxflxcay17hxjw3wh5kfdwl2x8537csb18p1qzmyrkvscnja77"; depends=[Biobase MASS]; };
1784   plier = derive2 { name="plier"; version="1.66.0"; sha256="0zs053ih93klbdwz4gg8m5kizn9ifdccvgm21ddphv9jyn0sic4b"; depends=[affy Biobase]; };
1785   plotGrouper = derive2 { name="plotGrouper"; version="1.14.0"; sha256="1v8yjpavyz6gkm9wpv1ja3ifgdm25x7yw3rsb40py3bfz6wq50pr"; depends=[colourpicker dplyr egg ggplot2 ggpubr gridExtra gtable Hmisc magrittr readr readxl rlang scales shiny shinythemes stringr tibble tidyr]; };
1786   plotgardener = derive2 { name="plotgardener"; version="1.2.10"; sha256="1azl98gnr6019hzl8c6j3cs7wnq8wicwydxc7wga0882l4jaiv5c"; depends=[curl data_table dplyr ggplotify IRanges plyranges purrr RColorBrewer Rcpp rlang strawr]; };
1787   plyranges = derive2 { name="plyranges"; version="1.16.0"; sha256="16af5v9k40sc152bgywkhzxbwx3gyljmn4whx0idfr58q5lafk90"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicAlignments GenomicRanges IRanges magrittr rlang Rsamtools rtracklayer S4Vectors tidyselect]; };
1788   pmm = derive2 { name="pmm"; version="1.28.0"; sha256="1s2b4n91chjsplcmk8zj1sc8fm834vq1rygj10fvap9cnacc53pr"; depends=[lme4]; };
1789   pmp = derive2 { name="pmp"; version="1.8.0"; sha256="12bfbcvsxvlrv4znb7sy5ysmqr3rgpf24axcd5clhbw4xxsasak9"; depends=[ggplot2 impute matrixStats missForest pcaMethods reshape2 S4Vectors SummarizedExperiment]; };
1790   podkat = derive2 { name="podkat"; version="1.28.0"; sha256="1fv0xpir46hfm85lcp3r0wwwf95w3frxn869m41qqqd20l45dbv7"; depends=[Biobase BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Matrix Rcpp Rhtslib Rsamtools]; };
1791   pogos = derive2 { name="pogos"; version="1.16.0"; sha256="1yqz6zayjpgbjfv2b2xy1hrriyjp9p62sgz0m3wzc036ki6hdgj5"; depends=[ggplot2 httr ontoProc rjson S4Vectors shiny]; };
1792   polyester = derive2 { name="polyester"; version="1.32.0"; sha256="1l25aggq6yx00rcbqqmpn9w48lj28z1m4s52ngmd2yxvr1kfwz7y"; depends=[Biostrings IRanges limma logspline S4Vectors zlibbioc]; };
1793   powerTCR = derive2 { name="powerTCR"; version="1.16.0"; sha256="0wdaxhhsr0zap3mmcfsky5qxka38q86qm3fwdpxq3dprq87i4gyi"; depends=[cubature doParallel evmix foreach magrittr purrr truncdist vegan VGAM]; };
1794   ppcseq = derive2 { name="ppcseq"; version="1.4.0"; sha256="0m5cw7xjzway21ys1ihyp6s1ni05hxzswhixzig5w375m4qq32zp"; depends=[benchmarkme BH dplyr edgeR foreach furrr future ggplot2 lifecycle magrittr purrr Rcpp RcppEigen rlang rstan rstantools StanHeaders tibble tidybayes tidyr]; };
1795   ppiStats = derive2 { name="ppiStats"; version="1.62.0"; sha256="0w5gkfah2y50x4wj5fn8i6ycx1x013mn9w4bs8r2vfqabpws1a81"; depends=[Biobase Category graph lattice RColorBrewer]; };
1796   pqsfinder = derive2 { name="pqsfinder"; version="2.12.0"; sha256="1mzl1n5vag59m0i30p839dba400pl41kzqk6mqlysysrbhy55mq4"; depends=[BH Biostrings GenomicRanges IRanges Rcpp S4Vectors]; };
1797   pram = derive2 { name="pram"; version="1.12.0"; sha256="1shri7kc33wfliv6bjgcx9xxgblz6kg791r2zpbmj0mc1dwzvqz4"; depends=[BiocGenerics BiocParallel data_table GenomeInfoDb GenomicAlignments GenomicRanges IRanges Rsamtools rtracklayer S4Vectors]; };
1798   prebs = derive2 { name="prebs"; version="1.36.0"; sha256="0v72wxmv790bbwx5fblp90a3rxqg7g19ryv6xbi23753jd4l6290"; depends=[affy Biobase GenomeInfoDb GenomicAlignments GenomicRanges IRanges RPA S4Vectors]; };
1799   preciseTAD = derive2 { name="preciseTAD"; version="1.6.0"; sha256="0zj90y364yfdg6sws32b71n9wdjbw5rhygihcimnwszfhqkfm7hg"; depends=[caret cluster dbscan doSNOW e1071 foreach GenomicRanges gtools IRanges ModelMetrics pbapply pROC PRROC randomForest rCGH S4Vectors]; };
1800   preprocessCore = derive2 { name="preprocessCore"; version="1.58.0"; sha256="1sqpp00hhv6gypflrjw8qpqyqgdcp29m86gmi1di1574x8casdkf"; depends=[]; };
1801   primirTSS = derive2 { name="primirTSS"; version="1.14.0"; sha256="19m448jiww7z5jf54k625fqljh34nnaxrs9pz2by24kb1iwq9bml"; depends=[BiocGenerics Biostrings BSgenome_Hsapiens_UCSC_hg38 dplyr GenomicRanges GenomicScores Gviz IRanges JASPAR2018 phastCons100way_UCSC_hg38 purrr R_utils rtracklayer S4Vectors shiny stringr TFBSTools tibble tidyr]; };
1802   proActiv = derive2 { name="proActiv"; version="1.6.0"; sha256="1m3rcd6qffd27kdrac5zvriy04p22pky2ldb70069vlhykh979hm"; depends=[AnnotationDbi BiocParallel data_table DESeq2 dplyr GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 gplots IRanges rlang S4Vectors scales SummarizedExperiment tibble]; };
1803   proBAMr = derive2 { name="proBAMr"; version="1.30.0"; sha256="06k52jjii9mmy6nyq49f42j8z15snhq58zjj35piyj9vb8x5nl3n"; depends=[AnnotationDbi Biostrings GenomicFeatures GenomicRanges IRanges rtracklayer]; };
1804   proBatch = derive2 { name="proBatch"; version="1.11.0"; sha256="1296zlqpkf6pcdxn42sfb8sr8yml7fx97i6iw3ivq98fbgikrad6"; depends=[Biobase corrplot data_table dplyr ggfortify ggplot2 lazyeval lubridate magrittr pheatmap preprocessCore purrr pvca RColorBrewer reshape2 rlang scales sva tibble tidyr viridis wesanderson WGCNA]; };
1805   proDA = derive2 { name="proDA"; version="1.10.0"; sha256="13an4g1m671if0jvnxvcbvidlaycfyva6bipairjakzvisc3v7df"; depends=[BiocGenerics extraDistr S4Vectors SummarizedExperiment]; };
1806   proFIA = derive2 { name="proFIA"; version="1.22.0"; sha256="0cprrdb3mqx9vfqfhx64s0ix22piqy1g2vqjwzxsh5330rg9x4jd"; depends=[Biobase BiocParallel minpack_lm missForest pracma ropls xcms]; };
1807   procoil = derive2 { name="procoil"; version="2.24.0"; sha256="1yw59sjljwa4minnlf8w2cbasyf0xyfm3y7r7nw2cl9pkil7q8lh"; depends=[Biostrings kebabs S4Vectors]; };
1808   profileScoreDist = derive2 { name="profileScoreDist"; version="1.24.0"; sha256="04kvrw09zacvl9cxycw691vhijmhm9whb56iw19jh9w6910bd8g6"; depends=[BiocGenerics Rcpp]; };
1809   profileplyr = derive2 { name="profileplyr"; version="1.12.0"; sha256="0i4nrq3n122hz6y6fxnx9crv4k9dk1q75b0f38lclblm897vxhnw"; depends=[BiocGenerics BiocParallel ChIPseeker circlize ComplexHeatmap dplyr EnrichedHeatmap GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges magrittr org_Hs_eg_db org_Mm_eg_db pheatmap R_utils rGREAT rjson rlang Rsamtools rtracklayer S4Vectors soGGi SummarizedExperiment tidyr tiff TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene TxDb_Mmusculus_UCSC_mm10_knownGene TxDb_Mmusculus_UCSC_mm9_knownGene]; };
1810   progeny = derive2 { name="progeny"; version="1.18.0"; sha256="1rhy2l2yf9ndxlvff8756s6n8qyi42nz7a75lgygj5aqqckkj21b"; depends=[Biobase decoupleR dplyr ggplot2 ggrepel gridExtra reshape2 tidyr]; };
1811   projectR = derive2 { name="projectR"; version="1.12.0"; sha256="06xnygqzs4pbdilrm482dxv700bwwy94fkcqgzg1y93bg2pc9jcx"; depends=[cluster CoGAPS dplyr ggalluvial ggplot2 limma NMF RColorBrewer reshape2 ROCR scales viridis]; };
1812   protGear = derive2 { name="protGear"; version="1.0.0"; sha256="19kzjlm7d9yc8zr38cda9c8ijrakiv795av59gvi2h6hkbawh3z1"; depends=[Biobase data_table dplyr factoextra FactoMineR flexdashboard genefilter GGally ggplot2 ggpubr gtools htmltools kableExtra Kendall knitr limma magrittr MASS pheatmap plotly plyr purrr readr remotes rlang rmarkdown shiny shinydashboard styler tibble tidyr vsn]; };
1813   proteinProfiles = derive2 { name="proteinProfiles"; version="1.36.0"; sha256="0d229pa4drqpmx8557rc9ic4hck6p0b4kjrvcql97zxbawd42p9l"; depends=[]; };
1814   psichomics = derive2 { name="psichomics"; version="1.22.1"; sha256="01dgp09219abcvy1kc8hwkpx40rqsyl5g2i5x99c31zsnm4bmhrg"; depends=[AnnotationDbi AnnotationHub BiocFileCache cluster colourpicker data_table digest dplyr DT edgeR fastICA fastmatch ggplot2 ggrepel highcharter htmltools httr jsonlite limma pairsD3 plyr purrr R_utils Rcpp recount reshape2 Rfast shiny shinyBS shinyjs stringr SummarizedExperiment survival XML xtable]; };
1815   psygenet2r = derive2 { name="psygenet2r"; version="1.28.0"; sha256="1yak827sma4l90k7hvsknkiacbvz3q4rfbxc3v5m5hk0xdwh26fi"; depends=[BgeeDB Biobase biomaRt ggplot2 GO_db igraph labeling RCurl reshape2 stringr topGO]; };
1816   ptairMS = derive2 { name="ptairMS"; version="1.4.1"; sha256="0pdsb98gf11hh93h9ml546s36vsn9x2vq2fkq3zgyj708prpp7s7"; depends=[Biobase bit64 chron data_table doParallel DT enviPat foreach ggplot2 ggpubr gridExtra Hmisc minpack_lm MSnbase plotly Rcpp rhdf5 rlang scales shiny shinyscreenshot signal]; };
1817   pulsedSilac = derive2 { name="pulsedSilac"; version="1.9.1"; sha256="1zb8xzs9h4rcrnmsfvrwb1qixn3jbnzxdwqgdrb82hgmxabmajlb"; depends=[cowplot ggplot2 ggridges MuMIn R_utils robustbase S4Vectors SummarizedExperiment UpSetR]; };
1818   puma = derive2 { name="puma"; version="3.38.0"; sha256="0nvyn5j3j5054ifwc9mngf37hq40qdhrhfih195qalpkj6il2b1b"; depends=[affy affyio Biobase mclust oligo oligoClasses]; };
1819   pvac = derive2 { name="pvac"; version="1.44.0"; sha256="0vmfnc5cb1xxbhjaxz8rdvdx2w3dg0i8jnc4i9wa67x6rb3g19ba"; depends=[affy Biobase]; };
1820   pvca = derive2 { name="pvca"; version="1.36.0"; sha256="1356hc5zvfhkn7xgnxs1qm6w0fadb1nqsclgc5mlr15ckf1pr8gr"; depends=[Biobase lme4 Matrix vsn]; };
1821   pwOmics = derive2 { name="pwOmics"; version="1.28.0"; sha256="0viy8k7dcx1cgq23mq2779d8hfn4wffq4xi483fjizihs11hr6yy"; depends=[AnnotationDbi AnnotationHub Biobase BiocGenerics biomaRt data_table GenomicRanges gplots graph igraph rBiopaxParser STRINGdb]; };
1822   pwrEWAS = derive2 { name="pwrEWAS"; version="1.10.0"; sha256="1xfb9sqz6r21qgdqfs2jzlgky9myzdcqpv4vavh2g33bbnqbkknf"; depends=[abind BiocManager CpGassoc doParallel doSNOW foreach genefilter ggplot2 limma pwrEWAS_data shiny shinyBS shinyWidgets truncnorm]; };
1823   qPLEXanalyzer = derive2 { name="qPLEXanalyzer"; version="1.14.0"; sha256="18ma0calaywm4jdlr2v1vzhr4xiswqih9r72ggj9h0vvwwc7gfjw"; depends=[assertthat Biobase BiocGenerics Biostrings dplyr ggdendro ggplot2 IRanges limma magrittr MSnbase preprocessCore purrr RColorBrewer readr rlang scales stringr tibble tidyr tidyselect]; };
1824   qckitfastq = derive2 { name="qckitfastq"; version="1.12.0"; sha256="1xj882jm4fi7cy8lixzyliaxa617k7wx70bjkzwhd5k9hww28ld1"; depends=[data_table dplyr ggplot2 magrittr Rcpp reshape2 rlang RSeqAn seqTools zlibbioc]; };
1825   qcmetrics = derive2 { name="qcmetrics"; version="1.34.0"; sha256="1xr2j7d7k8fi4bfvgzmi100zhln7a7jq0jw0vn0b1jjs5zwlcikc"; depends=[Biobase knitr pander S4Vectors xtable]; };
1826   qmtools = derive2 { name="qmtools"; version="1.0.0"; sha256="17absfbzih3jam158byykpywlphvzjp3f59dzkjzx7x0wfps4mlz"; depends=[ggplot2 heatmaply igraph MsCoreUtils patchwork rlang scales SummarizedExperiment VIM]; };
1827   qpcrNorm = derive2 { name="qpcrNorm"; version="1.54.0"; sha256="06k1ymzylfsrfbs9cz6m8snrl841fbrrklymfxyrqd20kgfw13xi"; depends=[affy Biobase limma]; };
1828   qpgraph = derive2 { name="qpgraph"; version="2.30.2"; sha256="095d3qbi7852islcr30h5s5pny0ci8k60isbczajnfrf79zgad15"; depends=[annotate AnnotationDbi Biobase BiocParallel GenomeInfoDb GenomicFeatures GenomicRanges graph IRanges Matrix mvtnorm qtl Rgraphviz S4Vectors]; };
1829   qrqc = derive2 { name="qrqc"; version="1.50.0"; sha256="0dv6x2g5xkncvzrh37mxlf6hin46qdbj0hrnm83fapw2jb5bfy05"; depends=[Biostrings biovizBase brew ggplot2 plyr reshape Rhtslib testthat xtable]; };
1830   qsea = derive2 { name="qsea"; version="1.22.0"; sha256="0ir752k7is9ns6jxvdsxpjw6byxywl8kakvvfpya763rck014rw0"; depends=[BiocGenerics BiocParallel Biostrings BSgenome GenomeInfoDb GenomicRanges gtools HMMcopy IRanges limma Rsamtools rtracklayer zoo]; };
1831   qsmooth = derive2 { name="qsmooth"; version="1.12.0"; sha256="0fvmb4dd6hfh0m0zssisd3fgd2j93js45gqklpvldpcm76g0dnw7"; depends=[Hmisc SummarizedExperiment sva]; };
1832   qsvaR = derive2 { name="qsvaR"; version="1.0.0"; sha256="1gm2n5085jvz615lcd5qdpqlpk1wmrr395hgaixqgzxagwr5v6ll"; depends=[ggplot2 SummarizedExperiment sva]; };
1833   quantiseqr = derive2 { name="quantiseqr"; version="1.4.1"; sha256="0yvrgqnf3n5fb49sqcmi34hcvzbnkhndd5i9jq5haw23ns9czmva"; depends=[Biobase ggplot2 limSolve MASS preprocessCore rlang SummarizedExperiment tidyr]; };
1834   quantro = derive2 { name="quantro"; version="1.30.0"; sha256="1zfrz7lxyrbf0c8d277npzj1h4six9whkqplvcjmn3li0xj5qng3"; depends=[Biobase doParallel foreach ggplot2 iterators minfi RColorBrewer]; };
1835   quantsmooth = derive2 { name="quantsmooth"; version="1.62.0"; sha256="027am11ilisdn82k0f62dj0csninfxph1bsv5ff71hsjd9wghars"; depends=[quantreg]; };
1836   qusage = derive2 { name="qusage"; version="2.30.0"; sha256="0ljch8y7985c0q9mfkl0sxdacwyqflszi34qm8gc9lrjf67p0q21"; depends=[Biobase emmeans fftw limma nlme]; };
1837   qvalue = derive2 { name="qvalue"; version="2.28.0"; sha256="0cvhm5cldcnnxwa293dig1pj9lvj2hnz9zh4gfr25sw0xlcjzmyw"; depends=[ggplot2 reshape2]; };
1838   r3Cseq = derive2 { name="r3Cseq"; version="1.42.0"; sha256="1dzckmciyx985zc23im5dp8jrirscdrcwyacsck8w68i37aasrl1"; depends=[Biostrings data_table GenomeInfoDb GenomicRanges IRanges qvalue RColorBrewer Rsamtools rtracklayer sqldf VGAM]; };
1839   rBiopaxParser = derive2 { name="rBiopaxParser"; version="2.36.0"; sha256="05yh4zcqjwra301xala6b3wjx3i8dliifg1kydpy36gxm2qiy5l2"; depends=[data_table XML]; };
1840   rCGH = derive2 { name="rCGH"; version="1.26.0"; sha256="1a0dwqcs4mpwqqqxw07vphmvbqwh6989ifd7jkls0jcpn2zxsk9g"; depends=[aCGH affy AnnotationDbi DNAcopy GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 IRanges lattice limma mclust org_Hs_eg_db plyr shiny TxDb_Hsapiens_UCSC_hg18_knownGene TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; };
1841   rDGIdb = derive2 { name="rDGIdb"; version="1.22.0"; sha256="11zqkxvbha38riah0j25crg9lwmwp9017a37ap95bh65cvxr9870"; depends=[httr jsonlite]; };
1842   rGADEM = derive2 { name="rGADEM"; version="2.44.1"; sha256="052z9iavnmkaz9jzz7ycpb8z7qqq3s5k6a04icrwl00wff7zqa2q"; depends=[Biostrings BSgenome GenomicRanges IRanges seqLogo]; };
1843   rGREAT = derive2 { name="rGREAT"; version="1.28.0"; sha256="0px72r8mjimf5mxfwb9qz46kqpgjw5gaqq41hy0212ymjd8whaky"; depends=[GenomicRanges GetoptLong IRanges RCurl rjson]; };
1844   rGenomeTracks = derive2 { name="rGenomeTracks"; version="1.2.0"; sha256="06fgw2sfnpbnaaa1clj4ahvx19pqkylyka62mdhh34sq9majxisq"; depends=[imager reticulate rGenomeTracksData]; };
1845   rRDP = derive2 { name="rRDP"; version="1.30.0"; sha256="091picbs0cmvn1a0pmgpxg5j2gxcdj24d1vm1gz6dch8x9sl2ly2"; depends=[Biostrings]; };
1846   rSWeeP = derive2 { name="rSWeeP"; version="1.8.0"; sha256="063assf7vhf62ygd58bwhixbglhjvjd9qg9vxgzid3yhjdpn2rry"; depends=[pracma]; };
1847   rScudo = derive2 { name="rScudo"; version="1.12.0"; sha256="08yn4biv5cadby0pvg1zhy14yc9y90z203hm7wv329x217ccm90m"; depends=[Biobase BiocGenerics igraph S4Vectors stringr SummarizedExperiment]; };
1848   rTRM = derive2 { name="rTRM"; version="1.34.0"; sha256="17kgipd3nr9l20x5nak24zjfpfslcm8cbj7bhmq8ch9w2ysimpw9"; depends=[AnnotationDbi DBI igraph RSQLite]; };
1849   rTRMui = derive2 { name="rTRMui"; version="1.34.0"; sha256="1gzw30kcnrnmjx5pn7xr1kgkgwyyjl138nsiqly5xh7h9b1is0sm"; depends=[MotifDb org_Hs_eg_db org_Mm_eg_db rTRM shiny]; };
1850   rWikiPathways = derive2 { name="rWikiPathways"; version="1.16.0"; sha256="05nxgjc119yhkckykjzribawjxlg95qy9pb7yq1m7rv2j44izmfk"; depends=[data_table httr RCurl rjson tidyr XML]; };
1851   rain = derive2 { name="rain"; version="1.30.0"; sha256="1fn62w0d86lc1iilmi11cwqg2sk7fkhg9asdxnglsyiq8hz512ci"; depends=[gmp multtest]; };
1852   rama = derive2 { name="rama"; version="1.70.0"; sha256="1l10yq28d3qswcbza9f9jk1vx2cqzqn7r1ixwkvhj87yiqz99rhc"; depends=[]; };
1853   ramr = derive2 { name="ramr"; version="1.4.0"; sha256="06davx5rkcgms5423aksrcg07y4gg9xsaabhzy6adf7058xbl6dn"; depends=[BiocGenerics doParallel doRNG EnvStats ExtDist foreach GenomicRanges ggplot2 IRanges matrixStats reshape2 S4Vectors]; };
1854   ramwas = derive2 { name="ramwas"; version="1.20.0"; sha256="1an7ppyhnxcg2px9ydc9x623wi8vwbhxdxvvsvlna383j402r1xn"; depends=[BiocGenerics biomaRt Biostrings digest filematrix GenomicAlignments glmnet KernSmooth Rsamtools]; };
1855   randPack = derive2 { name="randPack"; version="1.42.0"; sha256="1mn1hwdmcvsijf5dvxvgj0pyg12m1ca4b6n0myjk5pva6xykwvhg"; depends=[Biobase]; };
1856   randRotation = derive2 { name="randRotation"; version="1.8.0"; sha256="0s92pvy6vw3jd2brvgnjdh3wacy3m0702qrn6wv5scsrn2b1kwxn"; depends=[Rdpack]; };
1857   rawrr = derive2 { name="rawrr"; version="1.4.0"; sha256="0828fmxn0bz0s01fjpripc1jg5jsdnq5l8m4c9bfwx5xnvcgsml4"; depends=[]; };
1858   rbsurv = derive2 { name="rbsurv"; version="2.54.0"; sha256="0dvf7nvafap2k5f3ap38zp0m4c12ih1jzg05c2n3l0wivimyp10s"; depends=[Biobase survival]; };
1859   rcellminer = derive2 { name="rcellminer"; version="2.18.0"; sha256="0spjill74i15j6l0ckg9yvans07fsxvim5gpq7rfxv2zblfvhaqb"; depends=[Biobase ggplot2 gplots rcellminerData shiny stringr]; };
1860   rebook = derive2 { name="rebook"; version="1.6.0"; sha256="02bg0gmxlcg3wj628wda41q58qjb3swqnf67nyyczjv17f4cpd8j"; depends=[BiocStyle CodeDepends dir_expiry filelock knitr rmarkdown]; };
1861   receptLoss = derive2 { name="receptLoss"; version="1.8.0"; sha256="0lymq3im87k8qv1f1aga08y45zssnb4f3z3hjzmk1ndzfkqb7ds2"; depends=[dplyr ggplot2 magrittr SummarizedExperiment tidyr]; };
1862   reconsi = derive2 { name="reconsi"; version="1.8.0"; sha256="0vpx9a9bwwnsgaxazmdggqvw1ap34xj30rshkq0imwfw8s1hagsq"; depends=[ggplot2 ks Matrix matrixStats phyloseq reshape2]; };
1863   recount = derive2 { name="recount"; version="1.22.0"; sha256="1mipj8nrihn7gmxn81l9bxv0rbr9zly7s3vfrbzimvg56iq8wrly"; depends=[BiocParallel derfinder downloader GenomeInfoDb GenomicRanges GEOquery IRanges RCurl rentrez rtracklayer S4Vectors SummarizedExperiment]; };
1864   recount3 = derive2 { name="recount3"; version="1.6.0"; sha256="0322vplaz77dmvkb7f2ybfgm5bidfq97zrprhvyn28zw2qllr8vg"; depends=[BiocFileCache data_table GenomicRanges Matrix R_utils RCurl rtracklayer S4Vectors sessioninfo SummarizedExperiment]; };
1865   recountmethylation = derive2 { name="recountmethylation"; version="1.6.1"; sha256="1k582mnq0vdjsz1jyb7h45p6klz9lc35law4x6ydjiv6z0wld55i"; depends=[BiocFileCache HDF5Array IlluminaHumanMethylation450kmanifest minfi R_utils RCurl rhdf5 S4Vectors]; };
1866   recoup = derive2 { name="recoup"; version="1.24.0"; sha256="1qrlhfrg991x0w5p4jlyra6wdvnqljiicckw0iqzybwp5xha8wkp"; depends=[BiocGenerics biomaRt Biostrings circlize ComplexHeatmap GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 httr IRanges Rsamtools RSQLite rtracklayer S4Vectors stringr]; };
1867   regionReport = derive2 { name="regionReport"; version="1.30.0"; sha256="1qqii65xvmj7fgsx45n6szpr0l3z6q2c9s76mx4977wq5rhx8w09"; depends=[BiocStyle DEFormats derfinder DESeq2 GenomeInfoDb GenomicRanges knitr knitrBootstrap RefManageR rmarkdown S4Vectors SummarizedExperiment]; };
1868   regioneR = derive2 { name="regioneR"; version="1.28.0"; sha256="11whi2v211xiz9s7cjl14d8vavlry2fmhvx12rma25wkjmhrpa3f"; depends=[Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges memoise rtracklayer S4Vectors]; };
1869   regsplice = derive2 { name="regsplice"; version="1.22.0"; sha256="0lfgihf3v2ipw13nshwk6nzqv8qajry45zi30qhibpjdi6d3fsjd"; depends=[edgeR glmnet limma pbapply S4Vectors SummarizedExperiment]; };
1870   regutools = derive2 { name="regutools"; version="1.8.0"; sha256="1r8qxl5md44vvywfvfpkqg5jqb8zkw7hwdh2qpii20jxfd8nf77c"; depends=[AnnotationDbi AnnotationHub BiocFileCache Biostrings DBI GenomicRanges Gviz IRanges RCy3 RSQLite S4Vectors]; };
1871   restfulSE = derive2 { name="restfulSE"; version="1.18.0"; sha256="09alrj7q373w01vylnymna8hjsgs5gg9ngadglasncnk3yswjg3d"; depends=[AnnotationDbi AnnotationHub bigrquery Biobase DBI DelayedArray dplyr ExperimentHub GO_db magrittr reshape2 rhdf5client rlang S4Vectors SummarizedExperiment]; };
1872   rexposome = derive2 { name="rexposome"; version="1.18.2"; sha256="07vmprnv5rg42ddq3bwh3d9m488rnfsn82wpkd3l5lx4mlzp81g5"; depends=[Biobase circlize corrplot FactoMineR ggplot2 ggrepel glmnet gplots gridExtra gtools Hmisc imputeLCMD lme4 lsr mice pryr reshape2 S4Vectors scales scatterplot3d stringr]; };
1873   rfPred = derive2 { name="rfPred"; version="1.34.2"; sha256="1ccicwvsfb0b4cmiykswmrhjzpycbfwvfpwz3n23yq594i7658v7"; depends=[data_table GenomeInfoDb GenomicRanges IRanges Rsamtools]; };
1874   rfaRm = derive2 { name="rfaRm"; version="1.8.0"; sha256="1brzplaw5nrwmayfjdqbwyd6xqq2h8421njpi63w6njjc41j9mhh"; depends=[Biostrings data_table httr IRanges magick rsvg rvest S4Vectors stringi xml2]; };
1875   rgoslin = derive2 { name="rgoslin"; version="1.0.99"; sha256="01gkgpqz5xb785par8xrx8mf8icbazxcskn9x2ailk5laaxd73sp"; depends=[dplyr Rcpp]; };
1876   rgsepd = derive2 { name="rgsepd"; version="1.28.0"; sha256="08b11x5qhkq5q17mbr4a2q5r6hz8rrd2xgssclm0flwp2czvnldx"; depends=[AnnotationDbi biomaRt DESeq2 GO_db goseq gplots org_Hs_eg_db SummarizedExperiment]; };
1877   rhdf5 = derive2 { name="rhdf5"; version="2.40.0"; sha256="00cp90mnb8p83jiflm6x4x0qf4p7gvgh47jk9jry6j3qyvfqaiff"; depends=[rhdf5filters Rhdf5lib]; };
1878   rhdf5client = derive2 { name="rhdf5client"; version="1.18.0"; sha256="1mxbpnyqhzvxqc34fyd31pai242ivzs0l28z2zssj8ja463fif9f"; depends=[DelayedArray httr R6 rjson S4Vectors]; };
1879   rhdf5filters = derive2 { name="rhdf5filters"; version="1.8.0"; sha256="1ipg0v8nqz1imj63scqmpiswcxbl4ankg3knfq4p06ic6ypbbmvs"; depends=[Rhdf5lib]; };
1880   riboSeqR = derive2 { name="riboSeqR"; version="1.30.0"; sha256="1zs3y0icsqrndjp9wwqz3jxysvyc9pch45y49j6g9b5b2l44ma26"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools seqLogo]; };
1881   ribor = derive2 { name="ribor"; version="1.8.0"; sha256="1jwzxcn2civ5g2wcdzi8a10lc0y96b7xpgdb2z3yq4s9sipmbw0j"; depends=[dplyr ggplot2 hash rhdf5 rlang S4Vectors tidyr yaml]; };
1882   ribosomeProfilingQC = derive2 { name="ribosomeProfilingQC"; version="1.8.0"; sha256="1f57r81g1gvfs84si4mz8r7058ga525hwdf71991z58hiyxbr7xd"; depends=[AnnotationDbi BiocGenerics Biostrings BSgenome cluster EDASeq GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggfittext ggplot2 ggrepel IRanges motifStack Rsamtools Rsubread rtracklayer RUVSeq S4Vectors scales XVector]; };
1883   rifi = derive2 { name="rifi"; version="1.0.0"; sha256="15rqmlx3cnl9n8y821v42ganfyazqg85jd757mwrkmvi4xwnbmpw"; depends=[car cowplot doMC dplyr egg foreach ggplot2 nls2 nnet rlang rtracklayer S4Vectors scales stringr SummarizedExperiment tibble]; };
1884   rmelting = derive2 { name="rmelting"; version="1.12.0"; sha256="1ag2cr4mlb824la0yywjrjkjsnxxmjp5svg2jv4017syl1l5dj2x"; depends=[Rdpack rJava]; };
1885   rmspc = derive2 { name="rmspc"; version="1.2.0"; sha256="1hj93l3l4maigqd9b4vhsa24x3fjqgqw0d81gm6rjv09pyn4zclh"; depends=[BiocManager GenomicRanges processx rtracklayer stringr]; };
1886   rnaEditr = derive2 { name="rnaEditr"; version="1.6.0"; sha256="1js6a0y5hmkilsq1vgnkjk798z6dnz0acphgfq40p7i6182w1bx8"; depends=[BiocGenerics bumphunter corrplot GenomeInfoDb GenomicRanges IRanges logistf plyr S4Vectors survival]; };
1887   rnaseqcomp = derive2 { name="rnaseqcomp"; version="1.26.0"; sha256="1gpdlv980nid6nsjg1prahdxwp1a8ij00xgzf08ir4ywpvy61ilz"; depends=[RColorBrewer]; };
1888   roar = derive2 { name="roar"; version="1.32.0"; sha256="0zq1praf5h9294cvmrb06l3chx8v40xw2sfvhlnh1516x9sjkwfc"; depends=[BiocGenerics GenomeInfoDb GenomicAlignments GenomicRanges IRanges rtracklayer S4Vectors SummarizedExperiment]; };
1889   rols = derive2 { name="rols"; version="2.24.4"; sha256="1hgd4zl8r3xxl5jc8yqyxdqsqpvn9dkmkf79ndqzldq8hmgrpdn9"; depends=[Biobase BiocGenerics httr jsonlite progress]; };
1890   ropls = derive2 { name="ropls"; version="1.28.2"; sha256="07gpx15r8c3wljiwxnff2zp7wxbhzz9r7njk8zg8hpy2q5qm3i6c"; depends=[Biobase MultiAssayExperiment MultiDataSet SummarizedExperiment]; };
1891   rprimer = derive2 { name="rprimer"; version="1.0.0"; sha256="040fy6zjvjjgz9syczvy8dpv02jnl3pv8vb75n40622z0c2hl1nx"; depends=[Biostrings bslib DT ggplot2 IRanges mathjaxr patchwork reshape2 S4Vectors shiny shinycssloaders shinyFeedback]; };
1892   rpx = derive2 { name="rpx"; version="2.4.1"; sha256="169yyyjvr46kis18yxlsznbdb5mdxnlxi6l9nrq5z49wnwx69vav"; depends=[BiocFileCache curl jsonlite RCurl xml2]; };
1893   rqt = derive2 { name="rqt"; version="1.22.0"; sha256="0039sk0dx4d7fqc9yl0grwlv5k18sv08piqyc3fyp66302p38wrj"; depends=[car CompQuadForm glmnet Matrix metap pls ropls RUnit SummarizedExperiment]; };
1894   rqubic = derive2 { name="rqubic"; version="1.42.0"; sha256="108mw7xx04lgkj38k017mw7na1jglsbw0rx1ixb1d7hcgaqjcs63"; depends=[biclust Biobase BiocGenerics]; };
1895   rrvgo = derive2 { name="rrvgo"; version="1.8.0"; sha256="1r90q18nhmzh45djbi1i5x3bcyzbybkp9d5j8i8yqxphs29sr5vx"; depends=[AnnotationDbi ggplot2 ggrepel GO_db GOSemSim pheatmap shiny tm treemap wordcloud]; };
1896   rsbml = derive2 { name="rsbml"; version="2.54.0"; sha256="1v11pspkml6xdsacgwxw8r4qdhbnn2h2sqgpm9aidaq9p2085b0v"; depends=[BiocGenerics graph]; };
1897   rsemmed = derive2 { name="rsemmed"; version="1.6.0"; sha256="0dw607kxcwv5dig5y3gja5916bpjki3bkphc7jxs79y9sl22zg4p"; depends=[dplyr igraph magrittr stringr]; };
1898   rtracklayer = derive2 { name="rtracklayer"; version="1.56.1"; sha256="10qy9s6253mgj871qfqn03i8yw10mz7id4cxfyf67qxczz2xmjls"; depends=[BiocGenerics BiocIO Biostrings GenomeInfoDb GenomicAlignments GenomicRanges IRanges RCurl restfulr Rsamtools S4Vectors XML XVector zlibbioc]; };
1899   runibic = derive2 { name="runibic"; version="1.18.0"; sha256="04a12w2hnybw5h27b7szd4v4r4p3z359xkrpqpqp9hmvbrx6apa6"; depends=[biclust Rcpp SummarizedExperiment testthat]; };
1900   sRACIPE = derive2 { name="sRACIPE"; version="1.12.0"; sha256="0q749j2pqhnmlx8d6vak3ig4ggqqwv74sfapfysbfg4n1v6cpkhp"; depends=[BiocGenerics ggplot2 gplots gridExtra htmlwidgets MASS RColorBrewer Rcpp reshape2 S4Vectors SummarizedExperiment umap visNetwork]; };
1901   sSNAPPY = derive2 { name="sSNAPPY"; version="1.0.2"; sha256="0in95n2nwqg63i0a8zi8hh0gp3m78qxrf4qp94xnxihiry8h1dam"; depends=[BiocParallel dplyr edgeR ggplot2 ggraph graphite igraph magrittr org_Hs_eg_db plyr purrr Rcpp RcppArmadillo reshape2 rlang SummarizedExperiment tibble]; };
1902   sSeq = derive2 { name="sSeq"; version="1.34.0"; sha256="0cc1kz4fqf87xiq00vli8fcp4lix723vsa9ax4g55l5lqxp3k8pv"; depends=[caTools RColorBrewer]; };
1903   safe = derive2 { name="safe"; version="3.36.0"; sha256="19hxp2zg48dmw1j5jsp2i9n6ccw4613i5bhi5wg6kld4wy8k496v"; depends=[AnnotationDbi Biobase SparseM]; };
1904   sagenhaft = derive2 { name="sagenhaft"; version="1.66.0"; sha256="0czbjc83df4xgavkqf4qvypcy0wzlzpdysjmyd189jqinagifzjy"; depends=[SparseM]; };
1905   sampleClassifier = derive2 { name="sampleClassifier"; version="1.20.0"; sha256="1gx76wcln8nxfm4h9klndi7rpzqpcci4h0fxqqhpsd0x19yw6rz2"; depends=[annotate e1071 ggplot2 MGFM MGFR]; };
1906   sangeranalyseR = derive2 { name="sangeranalyseR"; version="1.6.1"; sha256="0qp36w1mfwj0kzx055sc3gfyi0b86zahlsjvdiiclpwxh7wizkc4"; depends=[ape BiocStyle Biostrings data_table DECIPHER DT excelR ggdendro gridExtra knitr logger openxlsx phangorn plotly reshape2 rmarkdown sangerseqR seqinr shiny shinycssloaders shinydashboard shinyjs shinyWidgets stringr zeallot]; };
1907   sangerseqR = derive2 { name="sangerseqR"; version="1.32.0"; sha256="12rh6y38j66l21dlb1199imp4jwkpv19l306lj7qi7prcfwzhmmy"; depends=[Biostrings shiny]; };
1908   sarks = derive2 { name="sarks"; version="1.8.0"; sha256="1da5vxbf7r2yla1l1m5gcbqbka33c2ry7gwnmjixr6xlv9vs4209"; depends=[binom Biostrings cluster IRanges rJava]; };
1909   satuRn = derive2 { name="satuRn"; version="1.4.2"; sha256="1iyym6hakzwd6vcgmkgvgk593ikbjzcwh16r2j9zb2z4bf7y9wwz"; depends=[BiocParallel boot ggplot2 limma locfdr Matrix pbapply SummarizedExperiment]; };
1910   savR = derive2 { name="savR"; version="1.34.0"; sha256="04zlf3lyr6vnpj80m6fd2is2f7302sxwih8nzzjnc4ss972jid2k"; depends=[ggplot2 gridExtra reshape2 scales XML]; };
1911   scAlign = derive2 { name="scAlign"; version="1.9.0"; sha256="0g209c1m06wn66n4zm0gyy1pg41y39d9a14dlpahni7f5zs0zmvd"; depends=[FNN ggplot2 irlba purrr Rtsne Seurat SingleCellExperiment tensorflow]; };
1912   scAnnotatR = derive2 { name="scAnnotatR"; version="1.2.0"; sha256="067q57kabhqd1z8l3d91fw74aaw89nb48gm6fll4hv00nqza3n5b"; depends=[AnnotationHub ape caret data_tree dplyr e1071 ggplot2 kernlab pROC ROCR Seurat SingleCellExperiment SummarizedExperiment]; };
1913   scBFA = derive2 { name="scBFA"; version="1.10.0"; sha256="1w9jy37626ap1lfg7lg672nmbwq8w277mdk7b8xwif4hrjdzkl2f"; depends=[copula DESeq2 ggplot2 MASS Matrix Seurat SingleCellExperiment SummarizedExperiment zinbwave]; };
1914   scCB2 = derive2 { name="scCB2"; version="1.6.0"; sha256="0mlkm43piaw2krbh7sh7q26lzj0zvwnwhiw37i59va0kp1zg43h5"; depends=[doParallel DropletUtils edgeR foreach iterators Matrix rhdf5 Seurat SingleCellExperiment SummarizedExperiment]; };
1915   scClassify = derive2 { name="scClassify"; version="1.8.0"; sha256="0c4nrgwr7mzb888g27ak0gfz6hvm02n6y0y37z3c7xch71l0lqx0"; depends=[BiocParallel Cepo cluster diptest ggplot2 ggraph hopach igraph limma Matrix mgcv minpack_lm mixtools proxy proxyC S4Vectors statmod]; };
1916   scDD = derive2 { name="scDD"; version="1.20.0"; sha256="0bjww338z5qf2g97kbh85h9kpagjr59ff9f4alm33h16xz5mb7k0"; depends=[arm BiocParallel EBSeq fields ggplot2 mclust outliers S4Vectors scran SingleCellExperiment SummarizedExperiment]; };
1917   scDataviz = derive2 { name="scDataviz"; version="1.6.0"; sha256="0h7jb0pwff7vq5yarab1c242g1gx21y6h6a8pj7v9yi0i62j3p6n"; depends=[corrplot flowCore ggplot2 ggrepel MASS matrixStats RColorBrewer reshape2 S4Vectors scales Seurat SingleCellExperiment umap]; };
1918   scDblFinder = derive2 { name="scDblFinder"; version="1.10.0"; sha256="0y14dvdm16b3bvlrnz03adfylm1kj6jrp2fwciyldij2lfal90y0"; depends=[BiocGenerics BiocNeighbors BiocParallel BiocSingular bluster DelayedArray GenomeInfoDb GenomicRanges igraph IRanges MASS Matrix Rsamtools rtracklayer S4Vectors scater scran scuttle SingleCellExperiment SummarizedExperiment xgboost]; };
1919   scFeatureFilter = derive2 { name="scFeatureFilter"; version="1.16.0"; sha256="0nnw9di62r68ih25l11755aikgh2p577dnla1yb0q9gdxcvbyxai"; depends=[dplyr ggplot2 magrittr rlang tibble]; };
1920   scGPS = derive2 { name="scGPS"; version="1.10.0"; sha256="0z5my7x2yigl024nl0vx1261amf66q7vdgpam2wxqrsvw4f7ylvz"; depends=[caret DESeq2 dplyr dynamicTreeCut fastcluster ggplot2 glmnet locfit Rcpp RcppArmadillo RcppParallel SingleCellExperiment SummarizedExperiment]; };
1921   scHOT = derive2 { name="scHOT"; version="1.8.0"; sha256="05qkq5bg351rpx01q1c1hs7y1zygp6m6r7javia67j8r5w7iir3p"; depends=[BiocParallel ggforce ggplot2 igraph IRanges Matrix reshape S4Vectors SingleCellExperiment SummarizedExperiment]; };
1922   scMAGeCK = derive2 { name="scMAGeCK"; version="1.8.0"; sha256="0qmqn2w16wzgyrbfgh16xaw2kccm6nhdib9nva6w6mg29xa5ifkb"; depends=[ggplot2 Seurat]; };
1923   scMerge = derive2 { name="scMerge"; version="1.12.0"; sha256="0p55zp02zkdn7g6hdv7ilv7h4ii4988gkd6kf2naq83xs201m2k3"; depends=[BiocParallel BiocSingular cluster DelayedArray DelayedMatrixStats distr igraph M3Drop pdist proxy ruv S4Vectors SingleCellExperiment SummarizedExperiment]; };
1924   scPCA = derive2 { name="scPCA"; version="1.10.0"; sha256="1ia5z1qf2jvilamkw3vgxshw14bzl4xk19s1bm9f4p08ghvx6px0"; depends=[assertthat BiocParallel cluster coop DelayedArray dplyr elasticnet kernlab Matrix MatrixGenerics matrixStats origami purrr Rdpack RSpectra ScaledMatrix sparsepca stringr tibble]; };
1925   scPipe = derive2 { name="scPipe"; version="1.18.0"; sha256="13wam3qbp9c8qgsp7hm7jq7q0a1ala6mw2xnp3nfbyz39aiwbix9"; depends=[AnnotationDbi BiocGenerics biomaRt dplyr GenomicRanges GGally ggplot2 glue hash magrittr MASS mclust org_Hs_eg_db org_Mm_eg_db Rcpp reshape Rhtslib rlang robustbase rtracklayer S4Vectors scales scater SingleCellExperiment stringr SummarizedExperiment testthat zlibbioc]; };
1926   scReClassify = derive2 { name="scReClassify"; version="1.2.0"; sha256="1afwxnvn17a5awcggifas7zaiw2r556l9iq1yl4kq06s73c1dfws"; depends=[e1071 randomForest SingleCellExperiment SummarizedExperiment]; };
1927   scRecover = derive2 { name="scRecover"; version="1.12.0"; sha256="0p3j54ii9assvhpyy8x8zwibv56h7mf4clvahgp0shp0qg4x7zjv"; depends=[bbmle BiocParallel doParallel foreach gamlss kernlab MASS Matrix penalized preseqR pscl rsvd SAVER]; };
1928   scRepertoire = derive2 { name="scRepertoire"; version="1.6.0"; sha256="0an485i5myfiv2zzwd3ql7ckawid894md3k2603mz2yz6qfsl8yj"; depends=[doParallel dplyr ggalluvial ggplot2 igraph plyr powerTCR reshape2 rlang SeuratObject stringdist stringr SummarizedExperiment vegan]; };
1929   scShapes = derive2 { name="scShapes"; version="1.2.0"; sha256="1ammb3a7ddys5zl2maggx3xqvdycy9dn9fl4kffrnqv4abfkvs9c"; depends=[BiocParallel dgof emdbook magrittr MASS Matrix pscl VGAM]; };
1930   scTGIF = derive2 { name="scTGIF"; version="1.10.0"; sha256="0vmr6fginvs1zdzzqmvw8yz25s3w58fwb9ifk8rca922af4m72jx"; depends=[Biobase BiocStyle ggplot2 GSEABase igraph knitr msigdbr nnTensor plotly RColorBrewer Rcpp rmarkdown S4Vectors scales schex SingleCellExperiment SummarizedExperiment tagcloud tibble]; };
1931   scTHI = derive2 { name="scTHI"; version="1.8.0"; sha256="1izl8fk4p1ihxb42d4vi5pnxwi2v2j1630sbw70yajxav6i7riav"; depends=[BiocParallel Rtsne]; };
1932   scTensor = derive2 { name="scTensor"; version="2.6.0"; sha256="0g3qjxq48aq1kx3b7ma1faxyqvz1qxphvin5byhbird9hn36fljw"; depends=[abind AnnotationDbi AnnotationHub BiocManager BiocStyle Category ccTensor checkmate crayon DOSE ggplot2 GOstats heatmaply igraph knitr MeSHDbi meshr nnTensor outliers plotly plotrix reactome_db ReactomePA rmarkdown RSQLite rTensor S4Vectors schex SingleCellExperiment SummarizedExperiment tagcloud visNetwork]; };
1933   scTreeViz = derive2 { name="scTreeViz"; version="1.2.0"; sha256="005pin0wvq4vws436jqjnpxrgqy0c5pbfg1g3j6mwfpn970frawp"; depends=[clustree data_table digest epivizr epivizrData epivizrServer ggplot2 ggraph httr igraph Matrix Rtsne S4Vectors scater scran Seurat SingleCellExperiment SummarizedExperiment sys]; };
1934   scanMiR = derive2 { name="scanMiR"; version="1.2.0"; sha256="177v72kgzkh2mvbj1sz2c833w51dgknx23h04awi5kh1gxfbhshk"; depends=[BiocParallel Biostrings cowplot data_table GenomeInfoDb GenomicRanges ggplot2 ggseqlogo IRanges S4Vectors stringi]; };
1935   scanMiRApp = derive2 { name="scanMiRApp"; version="1.2.0"; sha256="1m24vq9cq8n912hx6l0q2miwz8ln235j74514lf97jc9srm60scm"; depends=[AnnotationDbi AnnotationFilter AnnotationHub BiocParallel Biostrings data_table digest DT ensembldb fst GenomeInfoDb GenomicFeatures GenomicRanges ggplot2 htmlwidgets IRanges Matrix plotly rintrojs rtracklayer S4Vectors scanMiR scanMiRData shiny shinycssloaders shinydashboard shinyjqui waiter]; };
1936   scater = derive2 { name="scater"; version="1.24.0"; sha256="0dqirggw7my5nq4ln9q0ya18ciqplkz9gx318ffias9ag3yii5rw"; depends=[beachmat BiocGenerics BiocNeighbors BiocParallel BiocSingular DelayedArray DelayedMatrixStats ggbeeswarm ggplot2 ggrepel gridExtra Matrix RColorBrewer RcppML rlang Rtsne S4Vectors scuttle SingleCellExperiment SummarizedExperiment viridis]; };
1937   scatterHatch = derive2 { name="scatterHatch"; version="1.2.0"; sha256="0a35xbd9ziph7h0dc6qc8816frkjqiawxwdyiac80s0r7r8x8mpx"; depends=[ggplot2 plyr spatstat_geom]; };
1938   sccomp = derive2 { name="sccomp"; version="1.0.0"; sha256="0acch9aa6w5lqkcvjcpzmaii65r1zb0hssndmjbbwn3zhm8ryirc"; depends=[BH boot dplyr forcats ggplot2 ggrepel lifecycle magrittr patchwork purrr Rcpp RcppEigen RcppParallel readr rlang rstan rstantools scales SeuratObject SingleCellExperiment StanHeaders stringr tibble tidyr tidyselect]; };
1939   scde = derive2 { name="scde"; version="2.24.0"; sha256="074rhfxv80hg4sfl4ksyqz6wz108zwp5bfi602p81i0zfprvkg3g"; depends=[BiocParallel Cairo edgeR extRemes flexmix MASS mgcv nnet pcaMethods quantreg RColorBrewer Rcpp RcppArmadillo rjson RMTstat Rook]; };
1940   scds = derive2 { name="scds"; version="1.12.0"; sha256="0zmqhsfdx60g1caxbf4vh356wf06v7fgfv7lng5y13vqlf5d875h"; depends=[dplyr Matrix pROC S4Vectors SingleCellExperiment SummarizedExperiment xgboost]; };
1941   schex = derive2 { name="schex"; version="1.10.0"; sha256="0kv0sagxkdqj5jd58hj7w7v0swrvnd162wqg31zb32iwxb8y012w"; depends=[cluster concaveman dplyr entropy ggforce ggplot2 hexbin scales Seurat shiny SingleCellExperiment]; };
1942   scmap = derive2 { name="scmap"; version="1.18.0"; sha256="0pfwaa9pgml11b84rpf7afdkmg8kxb4srgpc56571vaz388xrv7l"; depends=[Biobase BiocGenerics dplyr e1071 ggplot2 googleVis matrixStats proxy randomForest Rcpp RcppArmadillo reshape2 S4Vectors SingleCellExperiment SummarizedExperiment]; };
1943   scmeth = derive2 { name="scmeth"; version="1.16.0"; sha256="15v1f641zdk70l5ss08kgvvq5h7b213f6zc5bg8jakqx2cj99xx9"; depends=[AnnotationHub annotatr Biostrings BSgenome bsseq DelayedArray DT GenomeInfoDb GenomicRanges HDF5Array knitr reshape2 rmarkdown SummarizedExperiment]; };
1944   scone = derive2 { name="scone"; version="1.20.0"; sha256="05id34n6min03ha1chg5mrvx399qm2mby9kxkaz5w8fbidp97851"; depends=[aroma_light BiocParallel boot class cluster compositions diptest edgeR fpc gplots hexbin limma MatrixGenerics matrixStats mixtools rARPACK RColorBrewer rhdf5 RUVSeq SingleCellExperiment SummarizedExperiment]; };
1945   scoreInvHap = derive2 { name="scoreInvHap"; version="1.18.0"; sha256="10ipfhmp93jjw5ijqiv34vkl79i0wmc9mwwrz2j641qlbkyxziaq"; depends=[BiocParallel Biostrings GenomicRanges snpStats SummarizedExperiment VariantAnnotation]; };
1946   scp = derive2 { name="scp"; version="1.6.0"; sha256="09gjq6n7rp4wngfq1yplcrkjrc7yw9w6rg7d2jr6lfj1x74p8syn"; depends=[dplyr magrittr matrixStats MsCoreUtils MultiAssayExperiment QFeatures rlang S4Vectors SingleCellExperiment SummarizedExperiment]; };
1947   scran = derive2 { name="scran"; version="1.24.1"; sha256="1a6vlq8i5gh7zxm6igmy75187pkx42z28qjag50m49xy5valw3ni"; depends=[beachmat BH BiocGenerics BiocParallel BiocSingular bluster DelayedArray DelayedMatrixStats dqrng edgeR igraph limma Matrix metapod Rcpp S4Vectors scuttle SingleCellExperiment statmod SummarizedExperiment]; };
1948   scruff = derive2 { name="scruff"; version="1.14.0"; sha256="0y5p27ih1v4qz47i83zvwwk1d4qkw6i9hwkfpdma3fw87ffxdy0q"; depends=[AnnotationDbi BiocGenerics BiocParallel Biostrings data_table GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggbio ggplot2 ggthemes plyr Rsamtools Rsubread rtracklayer S4Vectors scales ShortRead SingleCellExperiment stringdist SummarizedExperiment]; };
1949   scry = derive2 { name="scry"; version="1.8.0"; sha256="16mj21r91jy8ircdz8rfrdli9gjy0hrx90kf6ghs305d3d4dl193"; depends=[BiocSingular DelayedArray glmpca HDF5Array Matrix SingleCellExperiment SummarizedExperiment]; };
1950   scuttle = derive2 { name="scuttle"; version="1.6.3"; sha256="1w1jy5fqkp2d03lp84d49fsksnl0pcg0wgqyd49d5k1mipdw4671"; depends=[beachmat BiocGenerics BiocParallel DelayedArray DelayedMatrixStats GenomicRanges Matrix Rcpp S4Vectors SingleCellExperiment SummarizedExperiment]; };
1951   sechm = derive2 { name="sechm"; version="1.4.1"; sha256="1rimldsflmaa0ljrhi4am91hvkx6k8xvx5b0q3yl5ndblv2i6rvc"; depends=[circlize ComplexHeatmap matrixStats randomcoloR S4Vectors seriation SummarizedExperiment]; };
1952   segmentSeq = derive2 { name="segmentSeq"; version="2.30.0"; sha256="16ijs06ccm36z634qyrs3pjcnv0ssdzbvd4r76n55qq0mb10fgcq"; depends=[abind baySeq GenomeInfoDb GenomicRanges IRanges Rsamtools S4Vectors ShortRead]; };
1953   segmenter = derive2 { name="segmenter"; version="1.2.0"; sha256="1q3dx6j3d85f94ki67lga81d7nk0swy5y8ip3fab186i3amdlwjk"; depends=[bamsignals ChIPseeker chromhmmData ComplexHeatmap GenomicRanges IRanges S4Vectors SummarizedExperiment]; };
1954   selectKSigs = derive2 { name="selectKSigs"; version="1.8.0"; sha256="00wbbakdd5jggd1wrv7cra1mrzs6r5jg21b760ym056wcmqggn09"; depends=[gtools HiLDA magrittr Rcpp]; };
1955   semisup = derive2 { name="semisup"; version="1.20.0"; sha256="0676sb39kz3aw70s87snj38kcdc3dhxq4i9wlbmafj4qxrly0l01"; depends=[VGAM]; };
1956   seq2pathway = derive2 { name="seq2pathway"; version="1.28.0"; sha256="0258fck970ryg3k5ilp5nhxpr3q6hgj3rgjnbxcmvmyclp3bfn8f"; depends=[biomaRt GenomicRanges GSA nnet seq2pathway_data WGCNA]; };
1957   seqArchR = derive2 { name="seqArchR"; version="1.0.0"; sha256="1qivaakafyr080a1r544hfkn109y6ahjpjprkr5qjcb89q5yi0pn"; depends=[BiocParallel Biostrings cli cluster cvTools fpc ggplot2 ggseqlogo MASS Matrix matrixStats prettyunits reshape2 reticulate]; };
1958   seqCAT = derive2 { name="seqCAT"; version="1.18.0"; sha256="0fjx1rl4jm2jil126iy594la13ai8yf4j2axyxhhs69v5wss2d8s"; depends=[dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges rlang rtracklayer S4Vectors scales SummarizedExperiment tidyr VariantAnnotation]; };
1959   seqCNA = derive2 { name="seqCNA"; version="1.42.0"; sha256="0jkg85ymhz0m7s910x9fp0jxq054j972ljzhvxah9b3y4q4nmxi1"; depends=[adehabitatLT doSNOW GLAD seqCNA_annot]; };
1960   seqLogo = derive2 { name="seqLogo"; version="1.62.0"; sha256="1lk3238m17acmd6lgjjbpscyxw8fm63wv34kbbr478wcih1wbwxr"; depends=[]; };
1961   seqPattern = derive2 { name="seqPattern"; version="1.28.0"; sha256="0nrrlr1nl9zxmp88qq8jn7wgmda6jh0xvp4nph94w4nwjsyb7xqn"; depends=[Biostrings GenomicRanges IRanges KernSmooth plotrix]; };
1962   seqTools = derive2 { name="seqTools"; version="1.30.0"; sha256="0cbikjgg6b5mpr8p8d3mfnyzz917qcvc3bsn3z2c3qq5kllp0qmd"; depends=[zlibbioc]; };
1963   seqbias = derive2 { name="seqbias"; version="1.44.0"; sha256="085nq6pf0bdn17wsbr5jnyy512v7rf67xff9rp5wz47mcifbv6rg"; depends=[Biostrings GenomicRanges Rhtslib]; };
1964   seqcombo = derive2 { name="seqcombo"; version="1.18.0"; sha256="1y8pv1zl0vv5ng9nl0rgsgig6k6n6v9jhmax7wgrplz056x1ha8p"; depends=[ggplot2 igraph yulab_utils]; };
1965   seqsetvis = derive2 { name="seqsetvis"; version="1.16.0"; sha256="0yzr1xcyhmziajj8c0v6gxsy5hz01i2ld0m4dvgx51f91gdv4q3p"; depends=[cowplot data_table eulerr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 ggplotify IRanges limma pbapply pbmcapply png RColorBrewer Rsamtools rtracklayer S4Vectors UpSetR]; };
1966   sesame = derive2 { name="sesame"; version="1.14.2"; sha256="1lpx2w21993i7jzwphf4hwl3d1da9qq6wcn8nr6rglfc23h0cj0i"; depends=[BiocFileCache BiocParallel dplyr GenomeInfoDb GenomicRanges ggplot2 illuminaio IRanges MASS preprocessCore readr reshape2 S4Vectors sesameData stringr SummarizedExperiment tibble wheatmap]; };
1967   sevenC = derive2 { name="sevenC"; version="1.16.0"; sha256="0gv319qrm37yrzvrv9ns0vsar18i0b94mgqbsnkw3122mzrlhfy1"; depends=[BiocGenerics boot data_table GenomeInfoDb GenomicRanges InteractionSet IRanges purrr readr rtracklayer S4Vectors]; };
1968   sevenbridges = derive2 { name="sevenbridges"; version="1.26.0"; sha256="170msiz4n1n16m3cddnw6jpwvh2j7y6gi6cvbzr4psqabynlvn7x"; depends=[curl data_table docopt httr jsonlite objectProperties S4Vectors stringr uuid yaml]; };
1969   shinyMethyl = derive2 { name="shinyMethyl"; version="1.32.0"; sha256="1636y3f9653l5dn4pyrq7kz54vjy2fmg4qrr9pav0215rfilgzyy"; depends=[BiocGenerics IlluminaHumanMethylation450kmanifest matrixStats minfi RColorBrewer shiny]; };
1970   shinyepico = derive2 { name="shinyepico"; version="1.4.2"; sha256="1pq6kmsq3b965vqc0y2aqniimwpv8i11af22qypcv0mhqk1xlx1m"; depends=[data_table doParallel dplyr DT foreach GenomicRanges ggplot2 gplots heatmaply limma minfi plotly reshape2 rlang rmarkdown rtracklayer shiny shinycssloaders shinyjs shinythemes shinyWidgets statmod tidyr zip]; };
1971   sigFeature = derive2 { name="sigFeature"; version="1.14.0"; sha256="0770hqhq7y1q3mknsfjh0x2rwlmm85wqhi7375bpj612npaqdc7m"; depends=[BiocParallel biocViews e1071 Matrix nlme openxlsx pheatmap RColorBrewer SparseM SummarizedExperiment]; };
1972   sigPathway = derive2 { name="sigPathway"; version="1.64.0"; sha256="1c2kwhbxgf66az7ssm2mab9n5x59zy4kxq8vblz5r9636xqaysif"; depends=[]; };
1973   siggenes = derive2 { name="siggenes"; version="1.70.0"; sha256="0amjqm2c8p1vjzx109p7n81wbsbx8rljwn6mbkl7dpi834im9d7l"; depends=[Biobase multtest scrime]; };
1974   sights = derive2 { name="sights"; version="1.22.0"; sha256="040qm341bk62pqdl58dninh8mbh7spn8m21vp2nhnmgdqy1v4kqp"; depends=[ggplot2 lattice MASS qvalue reshape2]; };
1975   signatureSearch = derive2 { name="signatureSearch"; version="1.10.0"; sha256="1kjxbfvbhhxlxg4ms74pz03vmpn39315rw2p0gq2amr94dqv6yd5"; depends=[AnnotationDbi BiocGenerics BiocParallel clusterProfiler data_table DelayedArray DOSE dplyr ExperimentHub fastmatch fgsea ggplot2 GSEABase HDF5Array magrittr Matrix qvalue Rcpp reactome_db readr reshape2 rhdf5 RSQLite scales SummarizedExperiment visNetwork]; };
1976   signeR = derive2 { name="signeR"; version="1.22.0"; sha256="13jv0f90p462clwncp2ggky0n1xx4vaicak8712dnqzfzch04pzm"; depends=[BiocGenerics Biostrings class GenomeInfoDb GenomicRanges IRanges nloptr NMF PMCMRplus Rcpp RcppArmadillo VariantAnnotation]; };
1977   sigsquared = derive2 { name="sigsquared"; version="1.28.0"; sha256="13dvbl3s345yqmdxcrk19ql1asspgcc08p9sfyx1n6caamwg90a9"; depends=[Biobase survival]; };
1978   similaRpeak = derive2 { name="similaRpeak"; version="1.28.0"; sha256="14bkmfwwx0x8gz78bzyhfgy5rpvvafxq5z9r8knv4qj6hp1kalsh"; depends=[R6]; };
1979   simplifyEnrichment = derive2 { name="simplifyEnrichment"; version="1.6.1"; sha256="0qblgdxmr7zc981529cca3ykakql618q1im6gaxw8pwws5jgpyk6"; depends=[AnnotationDbi BiocGenerics circlize clue cluster colorspace ComplexHeatmap digest GetoptLong GlobalOptions GO_db GOSemSim Matrix org_Hs_eg_db proxyC slam tm]; };
1980   sincell = derive2 { name="sincell"; version="1.28.0"; sha256="152hlryc3xhkyp2v7fq20f0d04b2wvr09fl5p8fhiw1r0465vyab"; depends=[cluster entropy fastICA fields ggplot2 igraph MASS proxy Rcpp reshape2 Rtsne scatterplot3d statmod TSP]; };
1981   single = derive2 { name="single"; version="1.0.0"; sha256="1nx6cglidcmxznmvpkydj1lhgb2wyisl3yqqj0kfzbng2mxv6g0r"; depends=[BiocGenerics Biostrings dplyr GenomicAlignments IRanges reshape2 rlang Rsamtools stringr tidyr]; };
1982   singleCellTK = derive2 { name="singleCellTK"; version="2.6.0"; sha256="06hvxxdd8sdx8idgfqpnlxap7mq80asqgl5iq2paa1p6zvjk0w1b"; depends=[ape batchelor Biobase BiocParallel celda celldex circlize cluster colorspace colourpicker ComplexHeatmap cowplot data_table DelayedArray DelayedMatrixStats DESeq2 dplyr DropletUtils DT enrichR ExperimentHub fields fishpond generics ggplot2 ggplotify ggrepel ggtree gridExtra GSEABase GSVA GSVAdata igraph KernSmooth limma magrittr MAST Matrix matrixStats metap msigdbr multtest plotly plyr R_utils reshape2 reticulate rlang rmarkdown ROCR Rtsne S4Vectors scater scDblFinder scds scMerge scran scRNAseq scuttle Seurat shiny shinyalert shinycssloaders shinyjs SingleCellExperiment SingleR SoupX SummarizedExperiment sva TENxPBMCData tibble TrajectoryUtils TSCAN tximport VAM withr yaml zinbwave]; };
1983   singscore = derive2 { name="singscore"; version="1.16.0"; sha256="0jnncpv9bjpp8xlzpx6ks78pil87cg0a3i5ihsp0yrs676dmhhhr"; depends=[Biobase BiocParallel edgeR ggplot2 ggrepel GSEABase magrittr matrixStats plotly plyr RColorBrewer reshape reshape2 S4Vectors SummarizedExperiment tidyr]; };
1984   sitadela = derive2 { name="sitadela"; version="1.4.0"; sha256="162y2xfnv3bpgcmzrr9mhbgns3q1sfpsiif163r3p667iic80ffv"; depends=[Biobase BiocGenerics biomaRt Biostrings GenomeInfoDb GenomicFeatures GenomicRanges IRanges Rsamtools RSQLite rtracklayer S4Vectors]; };
1985   sitePath = derive2 { name="sitePath"; version="1.12.0"; sha256="0kxg6zpljzqbvz00k2akv3fl5kwf90lldmgjzr429gwcip5ggzdf"; depends=[ape aplot ggplot2 ggrepel ggtree gridExtra RColorBrewer Rcpp seqinr tidytree]; };
1986   sizepower = derive2 { name="sizepower"; version="1.66.0"; sha256="0f5y2b4zx978js5y3vm77dcc1lvn9lqyjnpi5mdqxcmp6n5sbwgl"; depends=[]; };
1987   skewr = derive2 { name="skewr"; version="1.28.0"; sha256="0b800yjyfdqwzaxrkair1dgd54l5bdw72ppln464fppqq3lmr9l3"; depends=[IlluminaHumanMethylation450kmanifest methylumi minfi mixsmsn RColorBrewer S4Vectors wateRmelon]; };
1988   slalom = derive2 { name="slalom"; version="1.18.0"; sha256="04yy7h4d9jm44alg4w0yzslk4h8qrlz1ij9d5i40hlbra79nsy69"; depends=[BH ggplot2 GSEABase Rcpp RcppArmadillo rsvd SingleCellExperiment SummarizedExperiment]; };
1989   slingshot = derive2 { name="slingshot"; version="2.4.0"; sha256="0xapi66l5z2qdqns3fcjqcjal6npqj7rxra60lwjvbrq49pq69p2"; depends=[igraph matrixStats princurve S4Vectors SingleCellExperiment SummarizedExperiment TrajectoryUtils]; };
1990   snapCGH = derive2 { name="snapCGH"; version="1.66.0"; sha256="03mz36ghpj4fvl9klhjgkqnxds6ickva2azq3hnxmb7jnak3rnlq"; depends=[aCGH cluster DNAcopy GLAD limma tilingArray]; };
1991   snapcount = derive2 { name="snapcount"; version="1.8.0"; sha256="0dh7havwzl1fhypf5aygi56agf6hqps714viq9rjzk4bd9shmcna"; depends=[assertthat data_table GenomicRanges httr IRanges jsonlite magrittr Matrix purrr R6 rlang stringr SummarizedExperiment]; };
1992   snifter = derive2 { name="snifter"; version="1.6.0"; sha256="09hp1lchzhm8iilc34lnyaxr5002zcg3ihcfv4fv07vc5i52ydmw"; depends=[assertthat basilisk irlba reticulate]; };
1993   snm = derive2 { name="snm"; version="1.44.0"; sha256="08vpzp7xr2w2qg1zcxqqj4wayik661cv2s5niivb7r82jxf6rm6i"; depends=[corpcor lme4]; };
1994   snpStats = derive2 { name="snpStats"; version="1.46.0"; sha256="0a5b5nqc7n965jk45ijwkzbn416ib4gfhp8xl39z8f2bdskip4a2"; depends=[BiocGenerics Matrix survival zlibbioc]; };
1995   soGGi = derive2 { name="soGGi"; version="1.28.0"; sha256="0hdqikcisva4blak5znwwv4xxvxxkg5n3jx0q4mhbqk7sp28p8vp"; depends=[BiocGenerics BiocParallel Biostrings chipseq GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges preprocessCore reshape2 Rsamtools rtracklayer S4Vectors SummarizedExperiment]; };
1996   sojourner = derive2 { name="sojourner"; version="1.10.0"; sha256="19gg70hjydxqj46ll6hanl3yvcpc9kmy65i1hh1w6yqph05xralb"; depends=[dplyr EBImage fitdistrplus ggplot2 gridExtra lattice MASS mclust minpack_lm mixtools mltools nls2 pixmap plyr R_matlab Rcpp reshape2 rlang scales shiny shinyjs sp truncnorm]; };
1997   sparrow = derive2 { name="sparrow"; version="1.2.0"; sha256="0asmqfadqjc99dvrcdsz6jcvqkkqd5d3cf822jpf93ywk75a7gww"; depends=[babelgene BiocGenerics BiocParallel BiocSet checkmate circlize ComplexHeatmap data_table DelayedMatrixStats edgeR ggplot2 GSEABase irlba limma Matrix plotly viridis]; };
1998   sparseDOSSA = derive2 { name="sparseDOSSA"; version="1.20.0"; sha256="16wgj99i05s4gvv8i7k8ycdmyjs2bp6n61ahab0x10qhw823yy4s"; depends=[MASS MCMCpack optparse tmvtnorm]; };
1999   sparseMatrixStats = derive2 { name="sparseMatrixStats"; version="1.8.0"; sha256="0p12kay7p5zbfm2589wdx0n9jhgpf5fb2fsmkhn3p4ck4xcy13x2"; depends=[Matrix MatrixGenerics matrixStats Rcpp]; };
2000   sparsenetgls = derive2 { name="sparsenetgls"; version="1.14.0"; sha256="0818i5hk62gynb3f5slrw5b86n9gj14p9kabk1lhmdhqpbynpar5"; depends=[glmnet huge MASS Matrix]; };
2001   spatialDE = derive2 { name="spatialDE"; version="1.2.0"; sha256="1hbs8z8hfgmnj4zzjppg5zpkv6i4baaqargiwf8gqdv1abzi3dbn"; depends=[basilisk checkmate ggplot2 ggrepel gridExtra Matrix reticulate S4Vectors scales SpatialExperiment SummarizedExperiment]; };
2002   spatialHeatmap = derive2 { name="spatialHeatmap"; version="2.2.0"; sha256="1jl9p53k7sxjg4nn5qkfcsf0p1warg26j488x5nkpnqhng59pg0q"; depends=[av BiocFileCache BiocParallel data_table DESeq2 distinct dynamicTreeCut edgeR flashClust genefilter ggdendro ggplot2 ggplotify gplots gridExtra grImport HDF5Array htmlwidgets igraph limma magick Matrix plotly pROC rappdirs reshape2 rols rsvg S4Vectors scater scran scuttle shiny shinydashboard SingleCellExperiment SummarizedExperiment UpSetR visNetwork WGCNA xml2 yaml]; };
2003   spatzie = derive2 { name="spatzie"; version="1.2.0"; sha256="0zgy1m4ljsr51mdd8bqv64gx08yqk9r3cgbszyq4k0sjk136xg2m"; depends=[BiocGenerics BSgenome GenomeInfoDb GenomicFeatures GenomicInteractions GenomicRanges ggplot2 IRanges matrixStats motifmatchr S4Vectors SummarizedExperiment TFBSTools]; };
2004   specL = derive2 { name="specL"; version="1.30.0"; sha256="0xrjbwsjc02amgmmsj5s63fdlimf4726d9s22jmm243b6s16nbh6"; depends=[DBI protViz RSQLite seqinr]; };
2005   spicyR = derive2 { name="spicyR"; version="1.8.0"; sha256="1znndd64nz9jgw2paj5qb9wr7zrdl905q7kz0g159syl8lzlixg7"; depends=[BiocGenerics BiocParallel concaveman data_table dplyr ggplot2 IRanges lme4 lmerTest mgcv pheatmap rlang S4Vectors scam spatstat_core spatstat_geom tidyr]; };
2006   spikeLI = derive2 { name="spikeLI"; version="2.56.0"; sha256="1sjy783ab394x3f3wqsh1slcq6i2xdns25w1pkp7hvjwsrmmq8f4"; depends=[]; };
2007   spiky = derive2 { name="spiky"; version="1.2.0"; sha256="0nfazdrlzgh1p3rsfmaibkyag5h0mmbbmnhaqg6nxnv92yddqfyr"; depends=[bamlss Biostrings BlandAltmanLeh BSgenome GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 IRanges Rsamtools S4Vectors scales]; };
2008   spkTools = derive2 { name="spkTools"; version="1.52.0"; sha256="006v158b9397r1w64ah7rqxdzj4sxha5cb82rdcxssbwkz7zmghl"; depends=[Biobase gtools RColorBrewer]; };
2009   splatter = derive2 { name="splatter"; version="1.20.0"; sha256="1bh5w1jsxaizs0n9f9pv2s84l6j4k3fgdbyxwvzzva602kwhxbqf"; depends=[BiocGenerics BiocParallel checkmate crayon edgeR fitdistrplus ggplot2 locfit matrixStats S4Vectors scales scater SingleCellExperiment SummarizedExperiment]; };
2010   splineTimeR = derive2 { name="splineTimeR"; version="1.24.0"; sha256="1b0mlfmy237s4pw8ycf4z9qjq41kk1ayky6ga211bik35x0k6yzs"; depends=[Biobase FIs GeneNet GSEABase gtools igraph limma longitudinal]; };
2011   splots = derive2 { name="splots"; version="1.62.0"; sha256="08mrk44v90zs7hj7k809d6ay88rj7cpx3ijmnshp7fmf998l3pfm"; depends=[RColorBrewer]; };
2012   spqn = derive2 { name="spqn"; version="1.8.0"; sha256="02dd1irl15nb9ydwsjbdx1n01xiav0aylnmyipv1rjajciyg0xsq"; depends=[BiocGenerics ggplot2 ggridges matrixStats SummarizedExperiment]; };
2013   srnadiff = derive2 { name="srnadiff"; version="1.16.0"; sha256="1g2g6y2mlqq7p79q5xm11i963gjxbzzxvggz5lzpl55kaz8bxxlr"; depends=[baySeq BiocManager BiocParallel BiocStyle DESeq2 devtools edgeR GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges Gviz IRanges Rcpp Rsamtools rtracklayer S4Vectors SummarizedExperiment]; };
2014   ssPATHS = derive2 { name="ssPATHS"; version="1.10.0"; sha256="0zf9mpjsrcvp4mj41dz9r8q0r94b5rsgm9f17qv2pyl7a33daivv"; depends=[dml MESS ROCR SummarizedExperiment]; };
2015   sscore = derive2 { name="sscore"; version="1.68.0"; sha256="10zvpqjg19l1jwcvbz5bc2gm0gr25apnzl19y7d886bkd9xc68wl"; depends=[affy affyio]; };
2016   sscu = derive2 { name="sscu"; version="2.26.0"; sha256="1dd1kf6h062d2billx632ykbjyzygsmjlkvy7cfqq690bi54kqpj"; depends=[BiocGenerics Biostrings seqinr]; };
2017   ssize = derive2 { name="ssize"; version="1.70.0"; sha256="08bdw9x6dj52fv3jhp27pkbpri81mpn8rggawb5lp1si4fwaxzgk"; depends=[gdata xtable]; };
2018   ssrch = derive2 { name="ssrch"; version="1.12.0"; sha256="0l9rhi66knb9d9v93qbxf9vwz9wpz82vlfs39i5bwd3mprlzp6kx"; depends=[DT shiny]; };
2019   ssviz = derive2 { name="ssviz"; version="1.30.0"; sha256="0hnbcxn4m1q2yffi3xrxk4mbjxjn5axl5p8ffli145jjr00n0mq5"; depends=[Biostrings ggplot2 RColorBrewer reshape Rsamtools]; };
2020   staRank = derive2 { name="staRank"; version="1.38.0"; sha256="0jbyg1b2gc9snnqnybapqmp5mwyhh9b3l4dswfxbx3jdl514wamr"; depends=[cellHTS2]; };
2021   stageR = derive2 { name="stageR"; version="1.18.0"; sha256="0ns3ih6l4na6irshrc5iy4d9qf7hrnqq3ndnlcjb2i1cn38l2w9y"; depends=[SummarizedExperiment]; };
2022   standR = derive2 { name="standR"; version="1.0.0"; sha256="0cqsvnm4ffg0gq5qlx81hmhz8cjpsc451jmwlvfzrhhxy3i9d1v5"; depends=[Biobase BiocGenerics dplyr edgeR ggplot2 limma mclustcomp patchwork readr rlang ruv S4Vectors SingleCellExperiment SpatialExperiment SummarizedExperiment tibble tidyr]; };
2023   statTarget = derive2 { name="statTarget"; version="1.26.0"; sha256="0k182sp8vzrwn3zxxqyi11bq0ca90w5ly0pdc03kflgr4z186fs8"; depends=[impute pdist pls plyr randomForest ROC rrcov]; };
2024   stepNorm = derive2 { name="stepNorm"; version="1.68.0"; sha256="1czlhb9cqhacl4g87ydgsb8i9ilcxr9gb64kx7vxk49dv6ffyszi"; depends=[marray MASS]; };
2025   strandCheckR = derive2 { name="strandCheckR"; version="1.14.0"; sha256="15r5ng9z9zyijm7w562dml56lxjvj290cxbjm8r59dvb7g9br07b"; depends=[BiocGenerics dplyr GenomeInfoDb GenomicAlignments GenomicRanges ggplot2 gridExtra IRanges magrittr reshape2 rmarkdown Rsamtools S4Vectors stringr TxDb_Hsapiens_UCSC_hg38_knownGene]; };
2026   struct = derive2 { name="struct"; version="1.8.0"; sha256="03cd2v72m0p0k99qhvpsbhvdlvx608a7765h6zcawbys35h7k020"; depends=[knitr ontologyIndex rols S4Vectors SummarizedExperiment]; };
2027   structToolbox = derive2 { name="structToolbox"; version="1.8.0"; sha256="015iabqbjy4zar42dnrnj3602y89rc0ln2y3chrwfk3bd00317dj"; depends=[ggplot2 ggthemes gridExtra scales sp struct]; };
2028   subSeq = derive2 { name="subSeq"; version="1.26.0"; sha256="1fwnjw0bqjqwb39i4cy34ipa6nw6jmk01d4la7r3fmf57xz73sp7"; depends=[Biobase data_table digest dplyr ggplot2 magrittr qvalue tidyr]; };
2029   supersigs = derive2 { name="supersigs"; version="1.4.0"; sha256="0llhk099ql7xv5wcb710pgz6r5ljiac5g9bjwwvzvg3rnjnsq9im"; depends=[assertthat Biostrings caret dplyr rlang rsample SummarizedExperiment tidyr]; };
2030   supraHex = derive2 { name="supraHex"; version="1.34.0"; sha256="1677sffcndrymh8dlahl7qh35zs9k5h0h4x040a7lal1iaqzgxdi"; depends=[ape dplyr hexbin igraph magrittr MASS purrr readr stringr tibble tidyr]; };
2031   surfaltr = derive2 { name="surfaltr"; version="1.2.2"; sha256="1dx8nfvyknqahszg94064mkvb45b79biibagqz6w24lmymdvxv0v"; depends=[biomaRt Biostrings dplyr ggplot2 httr msa protr readr seqinr stringr testthat xml2]; };
2032   survcomp = derive2 { name="survcomp"; version="1.46.0"; sha256="1b39s6v0awmznfs2gkklps1x3pnk0b4420vhrhgfv5lakz89f1zi"; depends=[bootstrap ipred KernSmooth prodlim rmeta SuppDists survival survivalROC]; };
2033   survtype = derive2 { name="survtype"; version="1.12.0"; sha256="0ihq2js9j2wkbqpgvpk8mzd0rrjvwmmdph84nhm20z04mfbsl4k5"; depends=[clustvarsel pheatmap SummarizedExperiment survival survminer]; };
2034   sva = derive2 { name="sva"; version="3.44.0"; sha256="0ka259rn0la0hjslj7w24q1dyyh79h84nw6mxp7armqbfjb207a4"; depends=[BiocParallel edgeR genefilter limma matrixStats mgcv]; };
2035   svaNUMT = derive2 { name="svaNUMT"; version="1.2.0"; sha256="13kk77bqsm8pk8kwjk8ag4mg7f8fqgpypwkdv5zhqds51zb14pkm"; depends=[assertthat BiocGenerics Biostrings dplyr GenomeInfoDb GenomicFeatures GenomicRanges rlang rtracklayer S4Vectors stringr StructuralVariantAnnotation VariantAnnotation]; };
2036   svaRetro = derive2 { name="svaRetro"; version="1.2.0"; sha256="15q7k9rjds0qzyighfp1bn6j8jr36h9wckvb1sfg0zk3lhzr04sz"; depends=[assertthat BiocGenerics Biostrings dplyr GenomeInfoDb GenomicFeatures GenomicRanges rlang rtracklayer S4Vectors stringr StructuralVariantAnnotation VariantAnnotation]; };
2037   swfdr = derive2 { name="swfdr"; version="1.22.0"; sha256="1gkam38fcn0i5vrkngapf2wbbixbr059xi1xl04iwnllz1xg0sny"; depends=[]; };
2038   switchBox = derive2 { name="switchBox"; version="1.32.0"; sha256="0fyysinxa14fx2lwmpishyva7jn4m4k9cipxmbhinf2v5z5h3qj5"; depends=[gplots pROC]; };
2039   switchde = derive2 { name="switchde"; version="1.22.0"; sha256="0mgif3d6pkhivk8yrjdp4xm6kad5vm9g18mvn617zd71zfqd902y"; depends=[dplyr ggplot2 SingleCellExperiment SummarizedExperiment]; };
2040   synapsis = derive2 { name="synapsis"; version="1.2.0"; sha256="1m8js52l8spp3w40pypbha1ydgbjz0ypylk08gjxclw3jp9abwjy"; depends=[EBImage]; };
2041   synapter = derive2 { name="synapter"; version="2.20.1"; sha256="193j8r44msr0hhb9hvpk5yl0i2ns1lpzbfb585jfiji6w37lskrp"; depends=[Biobase Biostrings cleaver lattice MSnbase multtest qvalue RColorBrewer readr rmarkdown]; };
2042   synergyfinder = derive2 { name="synergyfinder"; version="3.4.5"; sha256="01m56wbb9qlyv4fj939h68g31vm0c1rfj0xammc5g2lwwwnnascz"; depends=[dplyr drc furrr future ggforce ggplot2 ggrepel gstat kriging lattice magrittr metR mice nleqslv pbapply plotly purrr reshape2 sp SpatialExtremes stringr tidyr tidyverse vegan]; };
2043   synlet = derive2 { name="synlet"; version="1.26.0"; sha256="0zygs6gskgddb68as4yh3bw1kjlsxk60rym1f6yxj5vzln0ka53c"; depends=[doBy dplyr ggplot2 magrittr RankProd RColorBrewer reshape2]; };
2044   systemPipeR = derive2 { name="systemPipeR"; version="2.2.2"; sha256="1yybbff29gwv6rm0nw4yjw73bbl5prfj8gj4zky917smjfd459im"; depends=[BiocGenerics Biostrings crayon GenomicRanges ggplot2 htmlwidgets magrittr Rsamtools S4Vectors ShortRead stringr SummarizedExperiment yaml]; };
2045   systemPipeShiny = derive2 { name="systemPipeShiny"; version="1.6.1"; sha256="1b0x9vy7mkppf20c0i5p65wjicz12njx7in9w4vjqggvixbc9cjn"; depends=[assertthat bsplus crayon dplyr drawer DT ggplot2 glue htmltools magrittr openssl plotly R6 rlang RSQLite rstudioapi shiny shinyAce shinydashboard shinydashboardPlus shinyFiles shinyjqui shinyjs shinytoastr shinyWidgets spsComps spsUtil stringr styler tibble vroom yaml]; };
2046   systemPipeTools = derive2 { name="systemPipeTools"; version="1.4.0"; sha256="0zandgmzwj5b3hk8w60rmmc40hkpsvg9vynpix50hi81s8vwj26j"; depends=[ape DESeq2 dplyr DT GGally ggplot2 ggrepel ggtree glmpca magrittr pheatmap plotly Rtsne SummarizedExperiment tibble]; };
2047   tLOH = derive2 { name="tLOH"; version="1.4.0"; sha256="03ap5c7pznmflnlx7q9bwl8d64x68vz849ld6lxhm7j6wsva2c9m"; depends=[data_table dplyr GenomicRanges ggplot2 MatrixGenerics purrr scales VariantAnnotation]; };
2048   tRNA = derive2 { name="tRNA"; version="1.14.0"; sha256="140lpja0brw898is5xazxdz1h1agfzwwx9w63fhxacyx1ll43h41"; depends=[BiocGenerics Biostrings GenomicRanges ggplot2 IRanges Modstrings S4Vectors scales stringr Structstrings XVector]; };
2049   tRNAdbImport = derive2 { name="tRNAdbImport"; version="1.14.0"; sha256="1c3jmx3ddr7yiijpv08lzgk52r49g2ir4xayf65fzqb90ni6k04q"; depends=[BiocGenerics Biostrings GenomicRanges httr IRanges Modstrings S4Vectors stringr Structstrings tRNA xml2]; };
2050   tRNAscanImport = derive2 { name="tRNAscanImport"; version="1.16.0"; sha256="1zfk4a4qm76ah2z0bmkl0h0xpbqfjlkgmiy478gi7xvnd5rm0gwy"; depends=[BiocGenerics Biostrings BSgenome GenomeInfoDb GenomicRanges IRanges Rsamtools rtracklayer S4Vectors stringr Structstrings tRNA XVector]; };
2051   tRanslatome = derive2 { name="tRanslatome"; version="1.34.0"; sha256="0pv11lrg0fsfpv933k7zjlqswb5zqqxx12cwrfkz91v3x3ivsbza"; depends=[anota Biobase DESeq2 edgeR GOSemSim gplots Heatplus limma org_Hs_eg_db plotrix RankProd sigPathway topGO]; };
2052   tanggle = derive2 { name="tanggle"; version="1.2.0"; sha256="1r04qmxq9ww0ly4mzpkxqv7xyva3mqy02lh3vw13v4dp9d9zaf7c"; depends=[ape ggplot2 ggtree phangorn]; };
2053   target = derive2 { name="target"; version="1.10.0"; sha256="00dwbwzv6y9nfs1cc2jv39b0fcjcbzwfnqmv3zicwfq1lsa4z9mv"; depends=[BiocGenerics GenomicRanges IRanges matrixStats shiny]; };
2054   tenXplore = derive2 { name="tenXplore"; version="1.18.1"; sha256="0abybqmmn5ah189c38j7l1msm985vdzk42a1cw0pkskvan62hw50"; depends=[AnnotationDbi matrixStats ontoProc org_Mm_eg_db restfulSE shiny SummarizedExperiment]; };
2055   ternarynet = derive2 { name="ternarynet"; version="1.40.0"; sha256="02r53h6224f8jwwvnv1n09s8i8akhq2qf562crq14m8qk5xw4scf"; depends=[BiocParallel igraph]; };
2056   terraTCGAdata = derive2 { name="terraTCGAdata"; version="1.0.0"; sha256="16sc6n1cgrxr425024k37vzy1n2pij8n7lzxq383r73wyp5z3zkc"; depends=[AnVIL BiocFileCache dplyr GenomicRanges MultiAssayExperiment RaggedExperiment readr S4Vectors TCGAutils tidyr]; };
2057   tidySingleCellExperiment = derive2 { name="tidySingleCellExperiment"; version="1.6.3"; sha256="1b90n9sirpff8dh8kh8m2p4lnpfpqfh0zwvhpk5ymnw7j7x1vw7n"; depends=[cli dplyr ellipsis fansi ggplot2 lifecycle magrittr pillar plotly purrr rlang S4Vectors SingleCellExperiment stringr SummarizedExperiment tibble tidyr tidyselect ttservice vctrs]; };
2058   tidySummarizedExperiment = derive2 { name="tidySummarizedExperiment"; version="1.6.1"; sha256="0y30479w9nim6yap55fcg99qi4599rnliacqaiq693qwnrglksmg"; depends=[cli dplyr ellipsis fansi ggplot2 lifecycle magrittr pillar plotly purrr rlang S4Vectors stringr SummarizedExperiment tibble tidyr tidyselect vctrs]; };
2059   tidybulk = derive2 { name="tidybulk"; version="1.8.2"; sha256="0ma28j78hcmhwzz6fcc9gp0rpwd1j2wf5nwhnc1xq66sm0wn299g"; depends=[dplyr GenomicRanges lifecycle magrittr preprocessCore purrr readr rlang scales stringi stringr SummarizedExperiment tibble tidyr tidyselect]; };
2060   tigre = derive2 { name="tigre"; version="1.50.0"; sha256="0a4nn8q6iz20xfpwjvdp387cc3w0wdd9rpn6p8gh3dkqh8wsnggd"; depends=[annotate AnnotationDbi Biobase BiocGenerics DBI gplots RSQLite]; };
2061   tilingArray = derive2 { name="tilingArray"; version="1.74.0"; sha256="17n30c0nybsqvmm920zfxfx82yz0afnv1p14jcrnhf3qi9ipdjna"; depends=[affy Biobase genefilter pixmap RColorBrewer strucchange vsn]; };
2062   timeOmics = derive2 { name="timeOmics"; version="1.7.1"; sha256="0s3h8rk7k2s6fnac3v5m8hc2mmdnb4dvbld6ad1as9ac0nvz3521"; depends=[dplyr ggplot2 ggrepel lmtest magrittr mixOmics plyr propr purrr stringr tibble tidyr]; };
2063   timecourse = derive2 { name="timecourse"; version="1.68.0"; sha256="10gin2dmg955ksg5s81kahracf889vdzjkj1f5nk59bpdyps2ga0"; depends=[Biobase limma marray MASS]; };
2064   timescape = derive2 { name="timescape"; version="1.20.0"; sha256="0w7jbk49647hzx1ny8xa8mf5q8nyfdn92xmw4k4lm8d7w1xbjx75"; depends=[dplyr gtools htmlwidgets jsonlite stringr]; };
2065   tkWidgets = derive2 { name="tkWidgets"; version="1.74.0"; sha256="0b7ic4sz8d93b4cp4idhcywc9j9y8dvamz5y4mm9p0xhn404s4k0"; depends=[DynDoc widgetTools]; };
2066   tomoda = derive2 { name="tomoda"; version="1.6.0"; sha256="032h10674vyp017jww0rfpgs8jn7kl5m9w36j3azzvjh5p04n9s7"; depends=[ggplot2 ggrepel RColorBrewer reshape2 Rtsne SummarizedExperiment umap]; };
2067   tomoseqr = derive2 { name="tomoseqr"; version="1.0.0"; sha256="0afxzfqllr1l8mhkv75wismhsb1ipsspws18x3gyx2cvwi3yz5mw"; depends=[animation BiocFileCache dplyr purrr readr shiny stringr tibble]; };
2068   topGO = derive2 { name="topGO"; version="2.48.0"; sha256="125r42ymk1irjmwk4sywjkcshs71s26p3zsvryfdvf56k5w162v6"; depends=[AnnotationDbi Biobase BiocGenerics DBI GO_db graph lattice matrixStats SparseM]; };
2069   topconfects = derive2 { name="topconfects"; version="1.12.0"; sha256="0v1cq7gvbwdqxczmy5vrw8yqk7h1bvx3rils4pkv7w9nhqps5g4k"; depends=[assertthat ggplot2]; };
2070   topdownr = derive2 { name="topdownr"; version="1.18.0"; sha256="1qrjgbs2lh851d22bcl75574jnyc554aqqxb34zdnpvpwavaqaya"; depends=[Biobase BiocGenerics Biostrings ggplot2 Matrix MSnbase mzR ProtGenerics S4Vectors]; };
2071   trackViewer = derive2 { name="trackViewer"; version="1.32.1"; sha256="0hifh15z5d83qmrvh3kpi8i18dfqqfj6kn4kqkkcyxbfm1yx62h1"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges graph grImport Gviz htmlwidgets InteractionSet IRanges plotrix Rcpp Rgraphviz rhdf5 Rsamtools rtracklayer S4Vectors scales]; };
2072   tracktables = derive2 { name="tracktables"; version="1.30.0"; sha256="0xv4n8avwls10dk2kn2mhjq69cfqkackdn1jdz85xq5z42qnkl10"; depends=[GenomicRanges IRanges RColorBrewer Rsamtools stringr tractor_base XML XVector]; };
2073   tradeSeq = derive2 { name="tradeSeq"; version="1.10.0"; sha256="0v9nqxrwa69qhmyaicn2vvs8haha4kzs93iqim306331vadp9qm0"; depends=[Biobase BiocParallel edgeR ggplot2 igraph magrittr MASS Matrix matrixStats mgcv pbapply princurve RColorBrewer S4Vectors SingleCellExperiment slingshot SummarizedExperiment tibble TrajectoryUtils viridis]; };
2074   transcriptR = derive2 { name="transcriptR"; version="1.24.0"; sha256="1zc6aasd5nzwl9jxr0rdriiq85adqdbfi5b9m3jyf69pa71sgy03"; depends=[BiocGenerics caret chipseq e1071 GenomeInfoDb GenomicAlignments GenomicFeatures GenomicRanges ggplot2 IRanges pROC reshape2 Rsamtools rtracklayer S4Vectors]; };
2075   transcriptogramer = derive2 { name="transcriptogramer"; version="1.18.0"; sha256="1zwyiabw3iagbp95q16pzwdx1i8w77ibqi5wawn1j046q9qi20fh"; depends=[biomaRt data_table doSNOW foreach ggplot2 igraph limma progress RedeR snow tidyr topGO]; };
2076   transformGamPoi = derive2 { name="transformGamPoi"; version="1.2.0"; sha256="0nc2524yfq44zlfiv8nawaj83i04kpmrmr18jg81gjcya6n0xayq"; depends=[DelayedArray glmGamPoi HDF5Array Matrix MatrixGenerics Rcpp SummarizedExperiment]; };
2077   transite = derive2 { name="transite"; version="1.14.0"; sha256="0h6d9akl1amz0b0k6f39pfg8szd7z85lxicw2bzy74pfmcdig3an"; depends=[BiocGenerics Biostrings dplyr GenomicRanges ggplot2 ggseqlogo gridExtra Rcpp scales TFMPvalue]; };
2078   transomics2cytoscape = derive2 { name="transomics2cytoscape"; version="1.6.1"; sha256="15a75mzbdzd8fm65mp7qpzwhgl0hy1r9ny02m97c4cm7qq0rl2hm"; depends=[dplyr KEGGREST purrr RCy3 tibble]; };
2079   traseR = derive2 { name="traseR"; version="1.26.0"; sha256="1saas8qiiir4hafshs8i8pbpj3rfnsngrfg9a4ryalnwnbqyh519"; depends=[BSgenome_Hsapiens_UCSC_hg19 GenomicRanges IRanges]; };
2080   traviz = derive2 { name="traviz"; version="1.2.0"; sha256="1y2gckk7nm1yb8qv1llkal3mzmdk11kgmdagflymhla4nx2gdgay"; depends=[Biobase ggplot2 mgcv princurve RColorBrewer rgl SingleCellExperiment slingshot SummarizedExperiment viridis]; };
2081   treeio = derive2 { name="treeio"; version="1.20.2"; sha256="1jymbyl82n88ckw0nkbj72rvlxbk5m7xmcmq3fyi885z7aasc0x1"; depends=[ape dplyr jsonlite magrittr rlang tibble tidytree]; };
2082   treekoR = derive2 { name="treekoR"; version="1.4.0"; sha256="0sd1vk1hzvma0644p8wz4037gmm5wpf1d8n22fa0d5m7c97qijrl"; depends=[ape data_table diffcyt dplyr edgeR ggiraph ggplot2 ggtree hopach lme4 multcomp patchwork SingleCellExperiment tidyr]; };
2083   trena = derive2 { name="trena"; version="1.18.1"; sha256="1d8rf8403by7bfqckhv25qz8bhx4ph0hq48w17d255awb1i8z6ly"; depends=[AnnotationDbi biomaRt Biostrings BSgenome BSgenome_Hsapiens_UCSC_hg19 BSgenome_Hsapiens_UCSC_hg38 BSgenome_Mmusculus_UCSC_mm10 DBI GenomicRanges glmnet lassopv MotifDb org_Hs_eg_db randomForest RMySQL RPostgreSQL RSQLite SNPlocs_Hsapiens_dbSNP150_GRCh38 WGCNA xgboost]; };
2084   tricycle = derive2 { name="tricycle"; version="1.4.0"; sha256="0bjkajcz6xcfak6071d0ihakrvgf7s0pmkn6vqkjd6yxbfld7zln"; depends=[AnnotationDbi circular dplyr GenomicRanges ggnewscale ggplot2 IRanges RColorBrewer S4Vectors scater scattermore SingleCellExperiment SummarizedExperiment]; };
2085   trigger = derive2 { name="trigger"; version="1.42.0"; sha256="09gbchwpifx5dkmw3irshb63jl22fn2sxsj450krqjjq1gjq1xhx"; depends=[corpcor qtl qvalue sva]; };
2086   trio = derive2 { name="trio"; version="3.34.0"; sha256="1d6gwzx99np8yrsmqnn23s94ib6k41290sv2h4nmzblsidsimlbs"; depends=[LogicReg siggenes survival]; };
2087   triplex = derive2 { name="triplex"; version="1.36.0"; sha256="07yfm0vvrvw21hvdrprsw8crjb07hvz36w83avrqq16v3l64xgq8"; depends=[Biostrings GenomicRanges IRanges S4Vectors XVector]; };
2088   tripr = derive2 { name="tripr"; version="1.2.0"; sha256="0v5yqzh20ha7zbl3d8xl04gw3qq9mfpnggk4aw3k8ckqasii10q7"; depends=[config data_table dplyr DT golem gridExtra plot3D plotly plyr pryr RColorBrewer shiny shinyBS shinyFiles shinyjs stringdist stringr]; };
2089   tscR = derive2 { name="tscR"; version="1.8.0"; sha256="0i8d739xd39bvj05bx4x98nhpdl1mjsdsci1vdw6ri2kh7hrihji"; depends=[class cluster dplyr dtw GenomicRanges ggplot2 gridExtra IRanges kmlShape knitr latex2exp prettydoc RColorBrewer rmarkdown S4Vectors SummarizedExperiment]; };
2090   tspair = derive2 { name="tspair"; version="1.53.0"; sha256="04xxrm313mnknhc38vl1sx6hic2g1x1xaa5772qlc7ip957hz85k"; depends=[Biobase]; };
2091   ttgsea = derive2 { name="ttgsea"; version="1.4.0"; sha256="15kzy6ah7yz1ldx79g3z3n2ipfc842hg1l72ijcrsni47l6gs8ss"; depends=[data_table DiagrammeR keras purrr stopwords text2vec textstem tm tokenizers]; };
2092   tweeDEseq = derive2 { name="tweeDEseq"; version="1.42.0"; sha256="152alh46baz6kjfqsawyh74if4jnyqq4axxw7ihj4b4c79r5bq9g"; depends=[cqn edgeR limma MASS]; };
2093   twilight = derive2 { name="twilight"; version="1.72.0"; sha256="1s0xv8kh5mfwa9z3f5096bq99g8ncnygcih7xb0fpvj6knpp0w5k"; depends=[Biobase]; };
2094   twoddpcr = derive2 { name="twoddpcr"; version="1.20.0"; sha256="0gjsbn47a8rid73krlip1nczhwnfi85a7023pchc9j98y85lv8w9"; depends=[class ggplot2 hexbin RColorBrewer S4Vectors scales shiny]; };
2095   txcutr = derive2 { name="txcutr"; version="1.2.0"; sha256="016y2g0n1394n3ynfxszxsnh9874r1f1jy4yh9c48c3ivkp36nk1"; depends=[AnnotationDbi BiocGenerics BiocParallel Biostrings GenomicFeatures GenomicRanges IRanges rtracklayer S4Vectors]; };
2096   tximeta = derive2 { name="tximeta"; version="1.14.1"; sha256="0hxq5lkrdiz0a3xpl88adrv4m55jr6g46a5m9pamc0w4bxddirr8"; depends=[AnnotationDbi AnnotationHub BiocFileCache Biostrings ensembldb GenomeInfoDb GenomicFeatures GenomicRanges IRanges jsonlite Matrix S4Vectors SummarizedExperiment tibble tximport]; };
2097   tximport = derive2 { name="tximport"; version="1.24.0"; sha256="1cnra82pvwz79a1hkw0phc6aa3v43r5p4nx8xyx5wzmkd7rjkc8x"; depends=[]; };
2098   uSORT = derive2 { name="uSORT"; version="1.22.0"; sha256="1fq9zqa0kgdzvc0bhr60kqkl27b5y525czfm0w7qmbv3a832mhhd"; depends=[Biobase BiocGenerics cluster fpc gplots igraph Matrix monocle plyr RANN RSpectra VGAM]; };
2099   uncoverappLib = derive2 { name="uncoverappLib"; version="1.6.0"; sha256="0r0vgi7pq93vpw7mcqw96ixfgkhwllw16v20jsk3v27jx5gvr31c"; depends=[BiocFileCache BSgenome_Hsapiens_UCSC_hg19 BSgenome_Hsapiens_UCSC_hg38 condformat DT EnsDb_Hsapiens_v75 EnsDb_Hsapiens_v86 GenomicRanges Gviz Homo_sapiens markdown openxlsx org_Hs_eg_db OrganismDbi processx rappdirs rlist Rsamtools S4Vectors shiny shinyBS shinycssloaders shinyjs shinyWidgets stringr TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; };
2100   unifiedWMWqPCR = derive2 { name="unifiedWMWqPCR"; version="1.32.0"; sha256="1skfs94a6bv05c844zf5vfqw1fbgxyppgdnckdbhxg2a2470a4wh"; depends=[BiocGenerics HTqPCR]; };
2101   universalmotif = derive2 { name="universalmotif"; version="1.14.1"; sha256="1sm54z8aq3534qjsa19wychhwcvwnjlkydmiqqvidiiwcxwqpjsr"; depends=[BiocGenerics Biostrings ggplot2 IRanges MASS Rcpp RcppThread rlang S4Vectors yaml]; };
2102   updateObject = derive2 { name="updateObject"; version="1.0.0"; sha256="0ng927m9hrmwlnx02pm35b5173a0wx1b2k54gww9xc1pz9b5zp24"; depends=[BiocGenerics digest S4Vectors]; };
2103   variancePartition = derive2 { name="variancePartition"; version="1.26.0"; sha256="0wk1xql8b0gxyrqz9hs54xvmp7qdw9b8jnv88p4vgv061iwyk7wv"; depends=[aod Biobase BiocParallel doParallel foreach ggplot2 gplots iterators limma lme4 lmerTest MASS Matrix pbkrtest progress Rdpack reshape2 RhpcBLASctl rlang scales]; };
2104   vbmp = derive2 { name="vbmp"; version="1.64.0"; sha256="02xxvam2dmhhqvm30gxh2v16894qbqha1mc7bl78gq5sc067yr0n"; depends=[]; };
2105   velociraptor = derive2 { name="velociraptor"; version="1.6.0"; sha256="07hbrjqwlxpjrznd9jbv3psqgrsadpa626acgzc02wkl9vfgg5bc"; depends=[basilisk BiocGenerics BiocParallel BiocSingular DelayedArray Matrix reticulate S4Vectors scuttle SingleCellExperiment SummarizedExperiment zellkonverter]; };
2106   veloviz = derive2 { name="veloviz"; version="1.2.1"; sha256="0k84ghg5c0qlkmd1ck3k1gly8gyd7l1qysm2jmw60nf1b8w8lxxz"; depends=[igraph Matrix mgcv Rcpp RSpectra]; };
2107   vidger = derive2 { name="vidger"; version="1.16.0"; sha256="0kn06i2kb6drq4g5y1xx8wrw4fp5q9147d5mnfj0jvi5db7cmsav"; depends=[Biobase DESeq2 edgeR GGally ggplot2 ggrepel knitr RColorBrewer rmarkdown scales SummarizedExperiment tidyr]; };
2108   viper = derive2 { name="viper"; version="1.30.0"; sha256="0ii6fg0bzgnwfrhlvkh34c17xg2wpyqvb1hg1qsh7prv8dij4q0x"; depends=[Biobase e1071 KernSmooth mixtools]; };
2109   vissE = derive2 { name="vissE"; version="1.4.0"; sha256="01gw1cjm9nz804hw64vsk2jicb86p0dl1qrgkadnixxzcksgb3gz"; depends=[ggforce ggplot2 ggraph ggrepel ggwordcloud GSEABase igraph msigdb plyr RColorBrewer reshape2 scales scico textstem tidygraph tm]; };
2110   vsn = derive2 { name="vsn"; version="3.64.0"; sha256="1ja7vdjvgx671l57f9fzfn4vc6q7xzfmqs4krg2rdyfaaf531gqf"; depends=[affy Biobase ggplot2 lattice limma]; };
2111   vtpnet = derive2 { name="vtpnet"; version="0.36.0"; sha256="10sr9rpq5bb1a76wa4r80w01cm5wmijc83f0aq2idbw8qbvxn39c"; depends=[doParallel foreach GenomicRanges graph gwascat]; };
2112   vulcan = derive2 { name="vulcan"; version="1.18.0"; sha256="0f9gmypm1n3g0a7k76kkzyxa3pm3jsqyb75d1xf148gr1n0qqf2w"; depends=[Biobase caTools ChIPpeakAnno csaw DESeq2 DiffBind GenomicRanges gplots locfit S4Vectors TxDb_Hsapiens_UCSC_hg19_knownGene viper wordcloud zoo]; };
2113   waddR = derive2 { name="waddR"; version="1.10.0"; sha256="15sg5912vvl3bhw1cfrk22r5azisp18dawipybj78rgzbqvrzga3"; depends=[arm BiocFileCache BiocParallel eva Rcpp RcppArmadillo SingleCellExperiment]; };
2114   wateRmelon = derive2 { name="wateRmelon"; version="2.2.0"; sha256="0adqyfabrvfcaj3mwp0rbqlcgpj92yb205cyhibbrs5gdr5ri4pv"; depends=[Biobase IlluminaHumanMethylation450kanno_ilmn12_hg19 illuminaio limma lumi matrixStats methylumi ROC]; };
2115   wavClusteR = derive2 { name="wavClusteR"; version="2.30.0"; sha256="04di095i9i19j9ppx8gdsk7n18vd02d4rjdi9d4a3p0xv05ihnb6"; depends=[BiocGenerics Biostrings foreach GenomicFeatures GenomicRanges ggplot2 Hmisc IRanges mclust Rsamtools rtracklayer S4Vectors seqinr stringr]; };
2116   weaver = derive2 { name="weaver"; version="1.62.0"; sha256="10d3pnrs26xmk2dpnfvkd5ngl9l5xcfcsch4za8jkissfs3w9y24"; depends=[codetools digest]; };
2117   webbioc = derive2 { name="webbioc"; version="1.68.0"; sha256="1g3srxsa2fqcn3r4wz4y19fwjmw3vawlcvdw6lbjdnvbgcafq1ah"; depends=[affy annaffy Biobase BiocManager gcrma multtest qvalue vsn]; };
2118   weitrix = derive2 { name="weitrix"; version="1.8.0"; sha256="0xkmh3k174jywrvaqanbbw4xinymx1fgds1n4i2qnv6bkdpcjfi1"; depends=[assertthat BiocGenerics BiocParallel Ckmeans_1d_dp DelayedArray DelayedMatrixStats dplyr ggplot2 glm2 limma purrr reshape2 RhpcBLASctl rlang S4Vectors scales SummarizedExperiment topconfects]; };
2119   widgetTools = derive2 { name="widgetTools"; version="1.74.0"; sha256="10w1s5h4za6ibmphvj145ir3lp22qgah2z8fvmipmf8ciq1jf86d"; depends=[]; };
2120   wiggleplotr = derive2 { name="wiggleplotr"; version="1.20.0"; sha256="0s128mm5w8n072k6j0fv1mxnxjpwisjp5lpz8a9z96cnn69bnr0i"; depends=[assertthat cowplot dplyr GenomeInfoDb GenomicRanges ggplot2 IRanges purrr rtracklayer S4Vectors]; };
2121   wpm = derive2 { name="wpm"; version="1.6.0"; sha256="12b3sf1xzxynv7c7r24rgzfzgznw3s00rwyg26f9c2agk8pz1cjq"; depends=[Biobase cli config dplyr DT ggplot2 golem logging RColorBrewer rlang shiny shinycustomloader shinydashboard shinyWidgets stringr SummarizedExperiment]; };
2122   wppi = derive2 { name="wppi"; version="1.4.0"; sha256="1008s39bb7sd261cy1vfgdah7bmhfw9qq322fh7g4wvpfw63ii9f"; depends=[dplyr igraph logger magrittr Matrix OmnipathR progress purrr RCurl rlang tibble tidyr]; };
2123   xcms = derive2 { name="xcms"; version="3.18.0"; sha256="0p2zd2728lj5q8y24gdfvsjijd6zl2i73hrcf017n32jq7vn71xm"; depends=[Biobase BiocGenerics BiocParallel IRanges lattice MassSpecWavelet MsCoreUtils MsFeatures MSnbase mzR plyr ProtGenerics RANN RColorBrewer robustbase S4Vectors SummarizedExperiment]; };
2124   xcore = derive2 { name="xcore"; version="1.0.0"; sha256="1czys3nbw1hzy0p6bblqa6qvp68xd7iifi2isw9dhsn2k4nkr0xf"; depends=[DelayedArray edgeR foreach GenomicRanges glmnet IRanges iterators magrittr Matrix MultiAssayExperiment S4Vectors]; };
2125   xmapbridge = derive2 { name="xmapbridge"; version="1.54.0"; sha256="1n3nxc4jwxf5z32i70sza52nyk29adhp8vc3hac7r5b8mbi6gg10"; depends=[]; };
2126   yamss = derive2 { name="yamss"; version="1.22.0"; sha256="1lcfxw73cxvpy3bnq28pxdy5128mpq5xklsa0mzxdjyqc4g55hy8"; depends=[BiocGenerics data_table EBImage IRanges limma Matrix mzR S4Vectors SummarizedExperiment]; };
2127   yarn = derive2 { name="yarn"; version="1.22.0"; sha256="0z5202pqq02fwm8qf1g36004k7sv668s1xacbpr1cvw5sl452lbg"; depends=[Biobase biomaRt downloader edgeR gplots limma matrixStats preprocessCore quantro RColorBrewer readr]; };
2128   zFPKM = derive2 { name="zFPKM"; version="1.18.0"; sha256="1h7g553rgb5mkmmsp8dyqqs9n9x17xmmcg3iijhb54nyrr2j1mji"; depends=[checkmate dplyr ggplot2 SummarizedExperiment tidyr]; };
2129   zellkonverter = derive2 { name="zellkonverter"; version="1.6.5"; sha256="0rxpjkisjj1xjchjjm72k8za5hn48wbdahmbllljvxm5ii6k36k6"; depends=[basilisk cli DelayedArray Matrix reticulate S4Vectors SingleCellExperiment SummarizedExperiment]; };
2130   zinbwave = derive2 { name="zinbwave"; version="1.18.0"; sha256="0vpz721sciw5b4ypxj5lj8p53gwkpfwlwkn6k3y8i65zg80p1g6i"; depends=[BiocParallel edgeR genefilter Matrix SingleCellExperiment softImpute SummarizedExperiment]; };
2131   zlibbioc = derive2 { name="zlibbioc"; version="1.42.0"; sha256="0w0y9jixdk6akmasn55g9g0nhlh93hbca5bwx5w1fypnvqrqpxzv"; depends=[]; };
2132   ABAEnrichment = derive2 { name="ABAEnrichment"; version="1.24.0"; sha256="1sp3f72rzlr822dxx42bswynrwwfx6f520hdhfdikqp13p2y4044"; depends=[ABAData data_table GOfuncR gplots gtools Rcpp]; broken = true; };
2133   ALPS = derive2 { name="ALPS"; version="1.5.0"; sha256="1aydvzc6x0871iasij68xqdlhjyg69qbqxm0qh1q52w8gj2nyq3p"; depends=[assertthat BiocParallel ChIPseeker corrplot data_table dplyr genefilter GenomicRanges GGally gghalves ggplot2 ggseqlogo Gviz magrittr org_Hs_eg_db plyr reshape2 rtracklayer stringr tibble tidyr TxDb_Hsapiens_UCSC_hg19_knownGene TxDb_Hsapiens_UCSC_hg38_knownGene]; broken = true; };
2134   Autotuner = derive2 { name="Autotuner"; version="1.7.0"; sha256="0k07gs6bnxs0894iqi1lhk96mifjcdf68bv4q9fjv50nzqpzqd8l"; depends=[assertthat Biobase cluster entropy MSnbase mzR RColorBrewer scales]; broken = true; };
2135   CompGO = derive2 { name="CompGO"; version="1.28.0"; sha256="16nlrk9wbxj51y8s7s58mdhpi70ghfacxi283406gwya3cm79f0n"; depends=[GenomicFeatures ggplot2 pathview pcaMethods reshape2 Rgraphviz rtracklayer TxDb_Mmusculus_UCSC_mm9_knownGene]; broken = true; };
2136   CountClust = derive2 { name="CountClust"; version="1.21.0"; sha256="17px9jkpjwz0j2f5h8xv52wh24ilqvlb6dvczjc36lb7mq4cw3sq"; depends=[cowplot flexmix ggplot2 gtools limma maptpx picante plyr reshape2 slam SQUAREM]; broken = true; };
2137   EasyqpcR = derive2 { name="EasyqpcR"; version="1.31.0"; sha256="0lb2px789668fr1gxghycy7lbdkpwmippv6xmmwws6rbanvfd6v4"; depends=[matrixStats plotrix plyr]; broken = true; };
2138   FindMyFriends = derive2 { name="FindMyFriends"; version="1.23.0"; sha256="0xbhl6ljxb522r5062vv6xdziaaqkkwylmvlymvc5f1grjz0a4z9"; depends=[Biobase BiocGenerics BiocParallel Biostrings digest dplyr filehash ggdendro ggplot2 gtable igraph IRanges kebabs Matrix Rcpp reshape2 S4Vectors]; broken = true; };
2139   FlowRepositoryR = derive2 { name="FlowRepositoryR"; version="1.23.0"; sha256="04lk2cahf6zqnhpzh0zwas4vmvaz4kcik9ri65bs9d9ximzjam91"; depends=[jsonlite RCurl XML]; broken = true; };
2140   GeneAnswers = derive2 { name="GeneAnswers"; version="2.36.0"; sha256="1f8q3hi913khyy1cc3yp2635gaik47alsqmhi0mi24cy340faplz"; depends=[annotate Biobase downloader Heatplus igraph KEGGREST MASS RBGL RColorBrewer RCurl RSQLite XML]; broken = true; };
2141   GenoGAM = derive2 { name="GenoGAM"; version="2.11.0"; sha256="058qix2h0zm2k9csmbdhci2wqih3lyggjj591cqn0ls2nv7bnyvj"; depends=[BiocParallel Biostrings data_table DelayedArray DESeq2 futile_logger GenomeInfoDb GenomicAlignments GenomicRanges HDF5Array IRanges Matrix Rcpp RcppArmadillo rhdf5 Rsamtools S4Vectors sparseinv SummarizedExperiment]; broken = true; };
2142   Herper = derive2 { name="Herper"; version="1.3.0"; sha256="038cavnbz7gvmv9mpnf88n8dzrg7yl306y68zsq5hpkrj6qax9vr"; depends=[reticulate rjson withr]; broken = true; };
2143   MSEADbi = derive2 { name="MSEADbi"; version="1.2.0"; sha256="1g1kg3nh7iwg5nrpmig6srw6as4yfwmbqn965pffrk0zp19llsbf"; depends=[AnnotationDbi Biobase DBI RSQLite]; broken = true; };
2144   MSGFgui = derive2 { name="MSGFgui"; version="1.28.0"; sha256="0dkj2nbv5xv4v4bbmf91av0ryh9pxdfp7fmbqlma4xyf1r7zmx4c"; depends=[MSGFplus mzID mzR shiny shinyFiles xlsx]; broken = true; };
2145   MSGFplus = derive2 { name="MSGFplus"; version="1.28.0"; sha256="1k0qm049gk4gjhd88zhxxrpc944r7ndq8dys08ai2kbaqignvb7y"; depends=[mzID ProtGenerics]; broken = true; };
2146   MSstatsTMTPTM = derive2 { name="MSstatsTMTPTM"; version="1.1.2"; sha256="16qnddwhwhjjfr5akdrmp93gkxq2r41s82hb1blbz47lwbj5kaj5"; depends=[dplyr ggplot2 gridExtra MSstatsTMT Rcpp reshape2 stringr]; broken = true; };
2147   MethCP = derive2 { name="MethCP"; version="1.7.0"; sha256="1smhwmrgckgivf6xfk54sz197cw1mar95chzkrfpf4wxw3jzbbkn"; depends=[BiocParallel bsseq DNAcopy DSS GenomeInfoDb GenomicRanges IRanges methylKit S4Vectors]; broken = true; };
2148   PanVizGenerator = derive2 { name="PanVizGenerator"; version="1.22.0"; sha256="0rhx2jc5kc9bl00v16frh8b4075n0jqn4s37pkvqp3ypcbqws32d"; depends=[igraph jsonlite pcaMethods shiny]; broken = true; };
2149   ProteomicsAnnotationHubData = derive2 { name="ProteomicsAnnotationHubData"; version="1.24.0"; sha256="0qs5hbx7pww7qxxaimp2xqvs3lwcd41ndls0xcvvlk7pnp4i4sk8"; depends=[AnnotationHub AnnotationHubData Biobase BiocManager Biostrings GenomeInfoDb MSnbase mzR RCurl]; broken = true; };
2150   RGalaxy = derive2 { name="RGalaxy"; version="1.38.0"; sha256="0vfsn8cj5c8n58ra1qz85gwmm1747lm3xdz17m20f73g8q78nymd"; depends=[Biobase BiocGenerics optparse roxygen2 XML]; broken = true; };
2151   RNASeqR = derive2 { name="RNASeqR"; version="1.12.0"; sha256="1f2rrk4lb8mawgy6pzkpdmjp85pl23mb89b45ay54jp28j16dgr5"; depends=[ballgown Biostrings clusterProfiler corrplot DESeq2 DOSE edgeR factoextra FactoMineR ggplot2 gridExtra org_Hs_eg_db org_Sc_sgd_db pathview PerformanceAnalytics pheatmap rafalib reshape2 reticulate Rsamtools stringr systemPipeR systemPipeRdata]; broken = true; };
2152   RmiR = derive2 { name="RmiR"; version="1.49.0"; sha256="16nwh4a97qvyicm4f102xs52lx8cld0b80fykgil86kkd6v8zlja"; depends=[DBI RmiR_Hs_miRNA]; broken = true; };
2153   SLGI = derive2 { name="SLGI"; version="1.54.0"; sha256="03jwdq4k44rys3f773c6l985a6v1bacbdghw97p0qpwspmzra8rs"; depends=[AnnotationDbi Biobase BiocGenerics GO_db lattice]; broken = true; };
2154   ScISI = derive2 { name="ScISI"; version="1.65.0"; sha256="0q3bbfsink5d8xslhp129qwvlq5mdzw8zkv9msd0q8qmkclsbiz1"; depends=[annotate AnnotationDbi apComplex GO_db org_Sc_sgd_db RpsiXML]; broken = true; };
2155   SwimR = derive2 { name="SwimR"; version="1.29.0"; sha256="0n58x3i4k3icvhg8z60zlhpszv8bb9pain07nl9rszyvmpi71vg2"; depends=[gplots R2HTML signal]; broken = true; };
2156   TSRchitect = derive2 { name="TSRchitect"; version="1.20.0"; sha256="1v9zz8ny9rwkyz98cv49l9ilh68h8mvm2x44n8i8rvjayc50zi9i"; depends=[AnnotationHub BiocGenerics BiocParallel dplyr GenomeInfoDb GenomicAlignments GenomicRanges gtools IRanges readxl Rsamtools rtracklayer S4Vectors SummarizedExperiment]; broken = true; };
2157   XCIR = derive2 { name="XCIR"; version="1.7.0"; sha256="0n42pw01wv1sk06hby9kwijx6zwaw4lrlpsa0wlkrkf323slkllw"; depends=[biomaRt data_table ggplot2 IRanges readxl S4Vectors seqminer VariantAnnotation]; broken = true; };
2158   affyPara = derive2 { name="affyPara"; version="1.51.0"; sha256="01165f84snc3ksk0ghw631i2l5jklp4n826jwy5926wvxy3zlwz0"; depends=[affy affyio aplpack snow vsn]; broken = true; };
2159   alsace = derive2 { name="alsace"; version="1.30.0"; sha256="17adr64g3l2syj0shi57nrvx105w7wrkiqm0qp3hwlk1ivmnadzn"; depends=[ALS ptw]; broken = true; };
2160   coexnet = derive2 { name="coexnet"; version="1.15.0"; sha256="1h3l7rjk757qbddyg0p8l21h8z3i4n3ml295lmavszsm9knyc2fk"; depends=[acde affy Biobase GEOquery igraph limma minet rmarkdown siggenes STRINGdb SummarizedExperiment vsn]; broken = true; };
2161   dualKS = derive2 { name="dualKS"; version="1.53.0"; sha256="16cfcylmmcj8x2808529lbpm7qbbrxygic0jkaglhqcdxgrqw3rw"; depends=[affy Biobase]; broken = true; };
2162   methyAnalysis = derive2 { name="methyAnalysis"; version="1.34.0"; sha256="05k3n7iy5ijidbnblbqqas8dsj8drwzbhyrbs8wl1ypkg51havi0"; depends=[annotate AnnotationDbi Biobase BiocGenerics biomaRt genefilter GenomeInfoDb GenomicFeatures GenomicRanges Gviz IRanges lumi methylumi org_Hs_eg_db rtracklayer SummarizedExperiment VariantAnnotation]; broken = true; };
2163   perturbatr = derive2 { name="perturbatr"; version="1.13.0"; sha256="0ssk8cr42hibn917s2z2nzcdan54c7xiydypbi8f3g4w68q4ly31"; depends=[assertthat diffusr doParallel dplyr foreach formula_tools ggplot2 igraph lazyeval lme4 magrittr rlang scales tibble tidyr]; broken = true; };
2164   predictionet = derive2 { name="predictionet"; version="1.40.0"; sha256="1f3ghlcfnls9mx2hbs923rdz7kn0wdhy2csp1y1286c5q5dybrgh"; depends=[catnet igraph MASS penalized RBGL]; broken = true; };
2165   scClassifR = derive2 { name="scClassifR"; version="1.2.0"; sha256="0p9l9q5ina0axrqvqn1y5wkfqi0nacxm3nm6ny34j53znv07b2zz"; depends=[ape caret data_tree dplyr e1071 ggplot2 kernlab pROC ROCR Seurat SingleCellExperiment SummarizedExperiment]; broken = true; };
2166   slinky = derive2 { name="slinky"; version="1.12.0"; sha256="05ywydvyz3jnzbhabhz1sd61hpy9nb22512zpbi48mv5wic1sv3v"; depends=[curl dplyr foreach httr jsonlite readr rhdf5 SummarizedExperiment tidyr]; broken = true; };
2167   tofsims = derive2 { name="tofsims"; version="1.22.0"; sha256="0da4843wbcr821yp8z3z4vd81qpm2lblckgd01fm89lmwj393z65"; depends=[ALS alsace KernSmooth ProtGenerics Rcpp RcppArmadillo signal]; broken = true; };
2168 }