pkgs/development/python-modules/segyio/default.nix

   1 {
   2   lib,
   3   buildPythonPackage,
   4   fetchFromGitHub,
   5   cmake,
   6   ninja,
   7   scikit-build,
   8   pytest,
   9   numpy,
  10 }:
  11
  12 buildPythonPackage rec {
  13   pname = "segyio";
  14   version = "1.9.12";
  15   pyproject = false; # Built with cmake
  16
  17   patches = [
  18     # https://github.com/equinor/segyio/pull/570
  19     ./add_missing_cstdint.patch
  20   ];
  21
  22   postPatch = ''
  23     # Removing unecessary build dependency
  24     substituteInPlace python/setup.py --replace "'pytest-runner'," ""
  25
  26     # Fixing bug making one test fail in the python 3.10 build
  27     substituteInPlace python/segyio/open.py --replace \
  28     "cube_metrics = f.xfd.cube_metrics(iline, xline)" \
  29     "cube_metrics = f.xfd.cube_metrics(int(iline), int(xline))"
  30   '';
  31
  32   src = fetchFromGitHub {
  33     owner = "equinor";
  34     repo = pname;
  35     rev = "refs/tags/v${version}";
  36     hash = "sha256-+N2JvHBxpdbysn4noY/9LZ4npoQ9143iFEzaxoafnms=";
  37   };
  38
  39   nativeBuildInputs = [
  40     cmake
  41     ninja
  42     scikit-build
  43   ];
  44
  45   # I'm not modifying the checkPhase nor adding a pytestCheckHook because the pytest is called
  46   # within the cmake test phase
  47   nativeCheckInputs = [
  48     pytest
  49     numpy
  50   ];
  51
  52   meta = with lib; {
  53     description = "Fast Python library for SEGY files";
  54     homepage = "https://github.com/equinor/segyio";
  55     license = licenses.lgpl3Only;
  56     maintainers = with maintainers; [ atila ];
  57   };
  58 }