pkgs/development/python-modules/tifffile/default.nix

   1 {
   2   lib,
   3   buildPythonPackage,
   4   dask,
   5   fetchPypi,
   6   fsspec,
   7   lxml,
   8   numpy,
   9   pytestCheckHook,
  10   pythonOlder,
  11   setuptools,
  12   zarr,
  13 }:
  14
  15 buildPythonPackage rec {
  16   pname = "tifffile";
  17   version = "2024.9.20";
  18   pyproject = true;
  19
  20   disabled = pythonOlder "3.9";
  21
  22   src = fetchPypi {
  23     inherit pname version;
  24     hash = "sha256-P7874vmVpwUaiuBaS+cMlvwHifIu1vHEEEyXPPaKZAs=";
  25   };
  26
  27   build-system = [ setuptools ];
  28
  29   dependencies = [ numpy ];
  30
  31   nativeCheckInputs = [
  32     dask
  33     fsspec
  34     lxml
  35     pytestCheckHook
  36     zarr
  37   ];
  38
  39   disabledTests = [
  40     # Test require network access
  41     "test_class_omexml"
  42     "test_write_ome"
  43     # Test file is missing
  44     "test_write_predictor"
  45     "test_issue_imagej_hyperstack_arg"
  46     "test_issue_description_overwrite"
  47     # AssertionError
  48     "test_write_bigtiff"
  49     "test_write_imagej_raw"
  50     # https://github.com/cgohlke/tifffile/issues/142
  51     "test_func_bitorder_decode"
  52     # Test file is missing
  53     "test_issue_invalid_predictor"
  54   ];
  55
  56   pythonImportsCheck = [ "tifffile" ];
  57
  58   # flaky, often killed due to OOM or timeout
  59   env.SKIP_LARGE = "1";
  60
  61   meta = with lib; {
  62     description = "Read and write image data from and to TIFF files";
  63     homepage = "https://github.com/cgohlke/tifffile/";
  64     changelog = "https://github.com/cgohlke/tifffile/blob/v${version}/CHANGES.rst";
  65     license = licenses.bsd3;
  66     maintainers = with maintainers; [ lebastr ];
  67   };
  68 }