pkgs/development/libraries/libminc/default.nix

   1 { lib, stdenv, fetchFromGitHub, cmake, zlib, netcdf, nifticlib, hdf5 }:
   2
   3 stdenv.mkDerivation rec {
   4   pname   = "libminc";
   5   version = "2.4.05";
   6
   7   owner = "BIC-MNI";
   8
   9   src = fetchFromGitHub {
  10     inherit owner;
  11     repo   = pname;
  12     rev    = "aa08255f0856e70fb001c5f9ee1f4e5a8c12d47d";  # new release, but no git tag
  13     sha256 = "XMTO6/HkyrrQ0s5DzJLCmmWheye2DGMnpDbcGdP6J+A=";
  14   };
  15
  16   postPatch = ''
  17     patchShebangs .
  18   '';
  19
  20   nativeBuildInputs = [ cmake ];
  21   buildInputs = [ zlib nifticlib ];
  22   propagatedBuildInputs = [ netcdf hdf5 ];
  23
  24   cmakeFlags = [
  25     "-DLIBMINC_MINC1_SUPPORT=ON"
  26     "-DLIBMINC_BUILD_SHARED_LIBS=ON"
  27     "-DLIBMINC_USE_NIFTI=ON"
  28     "-DLIBMINC_USE_SYSTEM_NIFTI=ON"
  29   ];
  30
  31   doCheck = !stdenv.isDarwin;
  32     # -j1: see https://github.com/BIC-MNI/libminc/issues/110
  33   checkPhase = ''
  34     ctest -j1 --output-on-failure
  35   '';
  36
  37   meta = with lib; {
  38     homepage = "https://github.com/BIC-MNI/libminc";
  39     description = "Medical imaging library based on HDF5";
  40     maintainers = with maintainers; [ bcdarwin ];
  41     platforms = platforms.unix;
  42     license = licenses.free;
  43   };
  44 }