Merge pull request #119126 from fabaff/pycomfoconnect
[NixPkgs.git] / pkgs / development / compilers / julia / 1.0.nix
blob5b1a4674a88a8f2f08ada1aca9b48e3a67d67bf5
1 { lib, stdenv, fetchpatch, fetchurl, fetchzip
2 # build tools
3 , gfortran, m4, makeWrapper, patchelf, perl, which, python2
4 , cmake
5 # libjulia dependencies
6 , libunwind, readline, utf8proc, zlib
7 # standard library dependencies
8 , curl, fftwSinglePrec, fftw, gmp, libgit2, mpfr, openlibm, openspecfun, pcre2
9 # linear algebra
10 , blas, lapack, arpack
11 # Darwin frameworks
12 , CoreServices, ApplicationServices
16 let
17   majorVersion = "1";
18   minorVersion = "0";
19   maintenanceVersion = "4";
20   src_sha256 = "1dfx68wbrrzpbh74rla7i2g3r5z6wa1pxq3ahyfm5m27vfyjbkhg";
22   libuvVersion = "ed3700c849289ed01fe04273a7bf865340b2bd7e";
23   libuvSha256 = "137w666zsjw1p0ma3lf94d75hr1q45sgkfmbizkyji2qm57cnxjs";
25   dsfmtVersion = "2.2.3";
26   dsfmt = fetchurl {
27     url = "http://www.math.sci.hiroshima-u.ac.jp/~m-mat/MT/SFMT/dSFMT-src-${dsfmtVersion}.tar.gz";
28     sha256 = "03kaqbjbi6viz0n33dk5jlf6ayxqlsq4804n7kwkndiga9s4hd42";
29   };
31   libuv = fetchurl {
32     url = "https://api.github.com/repos/JuliaLang/libuv/tarball/${libuvVersion}";
33     sha256 = libuvSha256;
34   };
36   rmathVersion = "0.1";
37   rmath-julia = fetchurl {
38     url = "https://api.github.com/repos/JuliaLang/Rmath-julia/tarball/v${rmathVersion}";
39     sha256 = "1qyps217175qhid46l8f5i1v8i82slgp23ia63x2hzxwfmx8617p";
40   };
42   virtualenvVersion = "15.0.0";
43   virtualenv = fetchurl {
44     url = "mirror://pypi/v/virtualenv/virtualenv-${virtualenvVersion}.tar.gz";
45     sha256 = "06fw4liazpx5vf3am45q2pdiwrv0id7ckv7n6zmpml29x6vkzmkh";
46   };
48   libwhichVersion = "81e9723c0273d78493dc8c8ed570f68d9ce7e89e";
49   libwhich = fetchurl {
50     url = "https://api.github.com/repos/vtjnash/libwhich/tarball/${libwhichVersion}";
51     sha256 = "1p7zg31kpmpbmh1znrk1xrbd074agx13b9q4dcw8n2zrwwdlbz3b";
52   };
54   llvmVersion = "6.0.0";
55   llvm = fetchurl {
56     url = "http://releases.llvm.org/6.0.0/llvm-${llvmVersion}.src.tar.xz";
57     sha256 = "0224xvfg6h40y5lrbnb9qaq3grmdc5rg00xq03s1wxjfbf8krx8z";
58   };
60   suitesparseVersion = "4.4.5";
61   suitesparse = fetchurl {
62     url = "http://faculty.cse.tamu.edu/davis/SuiteSparse/SuiteSparse-${suitesparseVersion}.tar.gz";
63     sha256 = "1jcbxb8jx5wlcixzf6n5dca2rcfx6mlcms1k2rl5gp67ay3bix43";
64   };
65   version = "${majorVersion}.${minorVersion}.${maintenanceVersion}";
68 stdenv.mkDerivation rec {
69   pname = "julia";
70   inherit version;
72   src = fetchzip {
73     url = "https://github.com/JuliaLang/${pname}/releases/download/v${version}/${pname}-${version}.tar.gz";
74     sha256 = src_sha256;
75   };
77   nativeBuildInputs = [ cmake curl gfortran m4 makeWrapper patchelf perl python2 which ];
78   # cmake is only used to build the bundled deps
79   dontUseCmakeConfigure = true;
81   # We assert that compatible blas and lapack are used.
82   buildInputs = assert (blas.isILP64 == lapack.isILP64); [
83     arpack fftw fftwSinglePrec gmp libgit2 libunwind mpfr
84     pcre2.dev blas lapack openlibm openspecfun readline utf8proc
85     zlib
86   ]
87   ++ lib.optionals stdenv.isDarwin [CoreServices ApplicationServices]
88   ;
90   patches = [
91     # Julia recompiles a precompiled file if the mtime stored *in* the
92     # .ji file differs from the mtime of the .ji file.  This
93     # doesn't work in Nix because Nix changes the mtime of files in
94     # the Nix store to 1. So patch Julia to accept mtimes of 1.
95     ./allow_nix_mtime.patch
96     ./diagonal-test.patch
97     ./use-system-utf8proc-julia-1.0.patch
98   ];
100   postPatch = ''
101     patchShebangs . contrib
102     for i in backtrace cmdlineargs; do
103       mv test/$i.jl{,.off}
104       touch test/$i.jl
105     done
106     rm stdlib/Sockets/test/runtests.jl && touch stdlib/Sockets/test/runtests.jl
107     rm stdlib/Distributed/test/runtests.jl && touch stdlib/Distributed/test/runtests.jl
108     sed -e 's/Invalid Content-Type:/invalid Content-Type:/g' -i ./stdlib/LibGit2/test/libgit2.jl
109     sed -e 's/Failed to resolve /failed to resolve /g' -i ./stdlib/LibGit2/test/libgit2.jl
110   '';
111   prePatch = ''
112     mkdir deps/srccache
113     cp "${dsfmt}" "./deps/srccache/dsfmt-${dsfmtVersion}.tar.gz"
114     cp "${rmath-julia}" "./deps/srccache/Rmath-julia-${rmathVersion}.tar.gz"
115     cp "${libuv}" "./deps/srccache/libuv-${libuvVersion}.tar.gz"
116     cp "${virtualenv}" "./deps/srccache/virtualenv-${virtualenvVersion}.tar.gz"
117     cp "${libwhich}" "./deps/srccache/libwhich-${libwhichVersion}.tar.gz"
118     cp "${llvm}" "./deps/srccache/llvm-${llvmVersion}.src.tar.xz"
119     cp "${suitesparse}" "./deps/srccache/SuiteSparse-${suitesparseVersion}.tar.gz"
120   '';
122   makeFlags =
123     let
124       arch = lib.head (lib.splitString "-" stdenv.system);
125       march = {
126         x86_64 = stdenv.hostPlatform.gcc.arch or "x86-64";
127         i686 = "pentium4";
128         aarch64 = "armv8-a";
129       }.${arch}
130               or (throw "unsupported architecture: ${arch}");
131       # Julia requires Pentium 4 (SSE2) or better
132       cpuTarget = { x86_64 = "x86-64"; i686 = "pentium4"; aarch64 = "generic"; }.${arch}
133                   or (throw "unsupported architecture: ${arch}");
134     in [
135       "ARCH=${arch}"
136       "MARCH=${march}"
137       "JULIA_CPU_TARGET=${cpuTarget}"
138       "PREFIX=$(out)"
139       "prefix=$(out)"
140       "SHELL=${stdenv.shell}"
142       (lib.optionalString (!stdenv.isDarwin) "USE_SYSTEM_BLAS=1")
143       "USE_BLAS64=${if blas.isILP64 then "1" else "0"}"
145       "USE_SYSTEM_LAPACK=1"
147       "USE_SYSTEM_ARPACK=1"
148       "USE_SYSTEM_FFTW=1"
149       "USE_SYSTEM_GMP=1"
150       "USE_SYSTEM_LIBGIT2=1"
151       "USE_SYSTEM_LIBUNWIND=1"
153       # We will probably never do that
154       #"USE_SYSTEM_LLVM=1"
155       "LLVM_VER=6.0.0"
157       "USE_SYSTEM_MPFR=1"
158       "USE_SYSTEM_OPENLIBM=1"
159       "USE_SYSTEM_OPENSPECFUN=1"
160       "USE_SYSTEM_PATCHELF=1"
161       "USE_SYSTEM_PCRE=1"
162       "PCRE_CONFIG=${pcre2.dev}/bin/pcre2-config"
163       "PCRE_INCL_PATH=${pcre2.dev}/include/pcre2.h"
164       "USE_SYSTEM_READLINE=1"
165       "USE_SYSTEM_UTF8PROC=1"
166       "USE_SYSTEM_ZLIB=1"
167     ];
169   LD_LIBRARY_PATH = assert (blas.isILP64 == lapack.isILP64); (lib.makeLibraryPath [
170     arpack fftw fftwSinglePrec gmp libgit2 mpfr blas lapack openlibm
171     openspecfun pcre2
172   ]);
174   doCheck = !stdenv.isDarwin;
175   checkTarget = "testall";
176   # Julia's tests require read/write access to $HOME
177   preCheck = ''
178     export HOME="$NIX_BUILD_TOP"
179   '';
181   preBuild = ''
182     sed -e '/^install:/s@[^ ]*/doc/[^ ]*@@' -i Makefile
183     sed -e '/[$](DESTDIR)[$](docdir)/d' -i Makefile
184     export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}
185   '';
187   postInstall = ''
188     # Symlink shared libraries from LD_LIBRARY_PATH into lib/julia,
189     # as using a wrapper with LD_LIBRARY_PATH causes segmentation
190     # faults when program returns an error:
191     #   $ julia -e 'throw(Error())'
192     find $(echo $LD_LIBRARY_PATH | sed 's|:| |g') -maxdepth 1 -name '*.${if stdenv.isDarwin then "dylib" else "so"}*' | while read lib; do
193       if [[ ! -e $out/lib/julia/$(basename $lib) ]]; then
194         ln -sv $lib $out/lib/julia/$(basename $lib)
195       fi
196     done
197   '';
199   passthru = {
200     inherit majorVersion minorVersion maintenanceVersion;
201     site = "share/julia/site/v${majorVersion}.${minorVersion}";
202   };
204   meta = {
205     description = "High-level performance-oriented dynamical language for technical computing";
206     homepage = "https://julialang.org/";
207     license = lib.licenses.mit;
208     maintainers = with lib.maintainers; [ raskin rob garrison ];
209     platforms = [ "i686-linux" "x86_64-linux" "x86_64-darwin" "aarch64-linux" ];
210   };