fixed writing out entries in advective bc
[OpenFOAM-1.6-ext.git] / src / meshTools / searchableSurface / searchableSurfacesQueries.C
blob952d51f4d428349ae43eaa7b2b28f81004369495
1 /*---------------------------------------------------------------------------*\
2   =========                 |
3   \\      /  F ield         | OpenFOAM: The Open Source CFD Toolbox
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25 \*----------------------------------------------------------------------------*/
27 #include "searchableSurfacesQueries.H"
28 #include "ListOps.H"
29 #include "OFstream.H"
30 #include "meshTools.H"
32 // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
34 defineTypeNameAndDebug(Foam::searchableSurfacesQueries, 0);
36 // * * * * * * * * * * * * * Private Member Functions  * * * * * * * * * * * //
38 Foam::pointIndexHit Foam::searchableSurfacesQueries::tempFindNearest
40     const searchableSurface& surf,
41     const point& pt,
42     const scalar initDistSqr
45     pointField onePoint(1, pt);
46     scalarField oneDist(1, initDistSqr);
47     List<pointIndexHit> oneHit(1);
48     surf.findNearest(onePoint, oneDist, oneHit);
49     return oneHit[0];
53 // Calculate sum of distance to surfaces.
54 Foam::scalar Foam::searchableSurfacesQueries::sumDistSqr
56     const PtrList<searchableSurface>& allSurfaces,
57     const labelList& surfacesToTest,
58     const scalar initDistSqr,
59     const point& pt
62     scalar sum = 0;
64     forAll(surfacesToTest, testI)
65     {
66         label surfI = surfacesToTest[testI];
68         pointIndexHit hit
69         (
70             tempFindNearest(allSurfaces[surfI], pt, initDistSqr)
71         );
73         // Note: make it fall over if not hit.
74         sum += magSqr(hit.hitPoint()-pt);
75     }
76     return sum;
80 // Reflects the point furthest away around the triangle centre by a factor fac.
81 // (triangle centre is the average of all points but the ihi. pSum is running
82 //  sum of all points)
83 Foam::scalar Foam::searchableSurfacesQueries::tryMorphTet
85     const PtrList<searchableSurface>& allSurfaces,
86     const labelList& surfacesToTest,
87     const scalar initDistSqr,
88     List<vector>& p,
89     List<scalar>& y,
90     vector& pSum,
91     const label ihi,
92     const scalar fac
95     scalar fac1 = (1.0-fac)/vector::nComponents;
96     scalar fac2 = fac1-fac;
98     vector ptry = pSum*fac1-p[ihi]*fac2;
100     scalar ytry = sumDistSqr(allSurfaces, surfacesToTest, initDistSqr, ptry);
102     if (ytry < y[ihi])
103     {
104         y[ihi] = ytry;
105         pSum += ptry - p[ihi];
106         p[ihi] = ptry;
107     }
108     return ytry;
112 bool Foam::searchableSurfacesQueries::morphTet
114     const PtrList<searchableSurface>& allSurfaces,
115     const labelList& surfacesToTest,
116     const scalar initDistSqr,
117     const scalar convergenceDistSqr,
118     const label maxIter,
119     List<vector>& p,
120     List<scalar>& y
123     vector pSum = sum(p);
125     autoPtr<OFstream> str;
126     label vertI = 0;
127     if (debug)
128     {
129         wordList names(surfacesToTest.size());
130         forAll(surfacesToTest, i)
131         {
132             names[i] = allSurfaces[surfacesToTest[i]].name();
133         }
134         Pout<< "searchableSurfacesQueries::morphTet : intersection of "
135             << names << " starting from points:" << p << endl;
136         str.reset(new OFstream("track.obj"));
137         meshTools::writeOBJ(str(), p[0]);
138         vertI++;
139     }
141     for (label iter = 0; iter < maxIter; iter++)
142     {
143         // Get the indices of lowest, highest and second-highest values.
144         label ilo, ihi, inhi;
145         {
146             labelList sortedIndices;
147             sortedOrder(y, sortedIndices);
148             ilo  = sortedIndices[0];
149             ihi  = sortedIndices[sortedIndices.size()-1];
150             inhi = sortedIndices[sortedIndices.size()-2];
151         }
153         if (debug)
154         {
155             Pout<< "Iteration:" << iter
156                 << " lowest:" << y[ilo] << " highest:" << y[ihi]
157                 << " points:" << p << endl;
159             meshTools::writeOBJ(str(), p[ilo]);
160             vertI++;
161             str()<< "l " << vertI-1 << ' ' << vertI << nl;
162         }
164         if (y[ihi] < convergenceDistSqr)
165         {
166             // Get point on 0th surface.
167             Swap(p[0], p[ilo]);
168             Swap(y[0], y[ilo]);
169             return true;
170         }
172         // Reflection: point furthest away gets reflected.
173         scalar ytry = tryMorphTet
174         (
175             allSurfaces,
176             surfacesToTest,
177             10*y[ihi],             // search box.
178             p,
179             y,
180             pSum,
181             ihi,
182             -1.0
183         );
185         if (ytry <= y[ilo])
186         {
187             // If in right direction (y lower) expand by two.
188             ytry = tryMorphTet
189             (
190                 allSurfaces,
191                 surfacesToTest,
192                 10*y[ihi],
193                 p,
194                 y,
195                 pSum,
196                 ihi,
197                 2.0
198             );
199         }
200         else if (ytry >= y[inhi])
201         {
202             // If inside tet try contraction.
204             scalar ysave = y[ihi];
206             ytry = tryMorphTet
207             (
208                 allSurfaces,
209                 surfacesToTest,
210                 10*y[ihi],
211                 p,
212                 y,
213                 pSum,
214                 ihi,
215                 0.5
216             );
218             if (ytry >= ysave)
219             {
220                 // Contract around lowest point.
221                 forAll(p, i)
222                 {
223                     if (i != ilo)
224                     {
225                         p[i] = 0.5*(p[i] + p[ilo]);
226                         y[i] = sumDistSqr
227                         (
228                             allSurfaces,
229                             surfacesToTest,
230                             y[ihi],
231                             p[i]
232                         );
233                     }
234                 }
235                 pSum = sum(p);
236             }
237         }
238     }
240     if (debug)
241     {
242         meshTools::writeOBJ(str(), p[0]);
243         vertI++;
244         str()<< "l " << vertI-1 << ' ' << vertI << nl;
245     }
247     // Failure to converge. Return best guess so far.
248     label ilo = findMin(y);
249     Swap(p[0], p[ilo]);
250     Swap(y[0], y[ilo]);
251     return false;
255 //// Get all intersections (in order) for single surface.
256 //void Foam::searchableSurfacesQueries::findAllIntersections
258 //    const searchableSurface& s,
259 //    const pointField& start,
260 //    const pointField& end,
261 //    const vectorField& smallVec,
262 //    List<List<pointIndexHit> >& surfaceHitInfo
265 //    surfaceHitInfo.setSize(start.size());
267 //    // Current start point of vector
268 //    pointField p0(start);
270 //    List<pointIndexHit> intersectInfo(start.size());
272 //    // For test whether finished doing vector.
273 //    const vectorField dirVec(end-start);
274 //    const scalarField magSqrDirVec(magSqr(dirVec));
276 //    while (true)
277 //    {
278 //        // Find first intersection. Synced.
279 //        s.findLine(p0, end, intersectInfo);
281 //        label nHits = 0;
283 //        forAll(intersectInfo, i)
284 //        {
285 //            if (intersectInfo[i].hit())
286 //            {
287 //                nHits++;
289 //                label sz = surfaceHitInfo[i].size();
290 //                surfaceHitInfo[i].setSize(sz+1);
291 //                surfaceHitInfo[i][sz] = intersectInfo[i];
293 //                p0[i] = intersectInfo[i].hitPoint() + smallVec[i];
295 //                // If beyond endpoint set to endpoint so as not to pick up
296 //                // any intersections. Could instead just filter out hits.
297 //                if (((p0[i]-start[i])&dirVec[i]) > magSqrDirVec[i])
298 //                {
299 //                    p0[i] = end[i];
300 //                }
301 //            }
302 //            else
303 //            {
304 //                // Set to endpoint to stop intersection test. See above.
305 //                p0[i] = end[i];
306 //            }
307 //        }
309 //        // returnReduce(nHits) ?
310 //        if (nHits == 0)
311 //        {
312 //            break;
313 //        }
314 //    }
318 // Given current set of hits (allSurfaces, allInfo) merge in those coming from
319 // surface surfI.
320 void Foam::searchableSurfacesQueries::mergeHits
322     const point& start,
323     const scalar mergeDist,
325     const label testI,                          // index of surface
326     const List<pointIndexHit>& surfHits,  // hits on surface
328     labelList& allSurfaces,
329     List<pointIndexHit>& allInfo,
330     scalarList& allDistSqr
333     // Precalculate distances
334     scalarList surfDistSqr(surfHits.size());
335     forAll(surfHits, i)
336     {
337         surfDistSqr[i] = magSqr(surfHits[i].hitPoint()-start);
338     }
340     forAll(surfDistSqr, i)
341     {
342         label index = findLower(allDistSqr, surfDistSqr[i]);
344         // Check if equal to lower.
345         if
346         (
347             index >= 0
348          && (mag(allDistSqr[index]-surfDistSqr[i]) < mergeDist)
349         )
350         {
351             // Same. Do not count.
352             //Pout<< "point:" << surfHits[i].hitPoint()
353             //    << " considered same as:" << allInfo[index].hitPoint()
354             //    << " within tol:" << mergeDist
355             //    << endl;
356         }
357         else
358         {
359             // Check if equal to higher
360             label next = index+1;
361             if
362             (
363                 next < allDistSqr.size()
364              && (mag(allDistSqr[next]-surfDistSqr[i]) < mergeDist)
365             )
366             {
367                 //Pout<< "point:" << surfHits[i].hitPoint()
368                 //    << " considered same as:" << allInfo[next].hitPoint()
369                 //    << " within tol:" << mergeDist
370                 //    << endl;
371             }
372             else
373             {
374                 // Insert after index
375                 label sz = allSurfaces.size();
376                 allSurfaces.setSize(sz+1);
377                 allInfo.setSize(allSurfaces.size());
378                 allDistSqr.setSize(allSurfaces.size());
379                 // Make space.
380                 for (label j = sz-1; j > index; --j)
381                 {
382                     allSurfaces[j+1] = allSurfaces[j];
383                     allInfo[j+1] = allInfo[j];
384                     allDistSqr[j+1] = allDistSqr[j];
385                 }
386                 // Insert new value
387                 allSurfaces[index+1] = testI;
388                 allInfo[index+1] = surfHits[i];
389                 allDistSqr[index+1] = surfDistSqr[i];
390             }
391         }
392     }
396 // * * * * * * * * * * * * * * * Member Functions  * * * * * * * * * * * * * //
398 // Find any intersection
399 void Foam::searchableSurfacesQueries::findAnyIntersection
401     const PtrList<searchableSurface>& allSurfaces,
402     const labelList& surfacesToTest,
403     const pointField& start,
404     const pointField& end,
405     labelList& hitSurfaces,
406     List<pointIndexHit>& hitInfo
409     hitSurfaces.setSize(start.size());
410     hitSurfaces = -1;
411     hitInfo.setSize(start.size());
413     // Work arrays
414     labelList hitMap(identity(start.size()));
415     pointField p0(start);
416     pointField p1(end);
417     List<pointIndexHit> intersectInfo(start.size());
419     forAll(surfacesToTest, testI)
420     {
421         // Do synchronised call to all surfaces.
422         allSurfaces[surfacesToTest[testI]].findLineAny(p0, p1, intersectInfo);
424         // Copy all hits into arguments, continue with misses
425         label newI = 0;
426         forAll(intersectInfo, i)
427         {
428             if (intersectInfo[i].hit())
429             {
430                 hitInfo[hitMap[i]] = intersectInfo[i];
431                 hitSurfaces[hitMap[i]] = testI;
432             }
433             else
434             {
435                 if (i != newI)
436                 {
437                     hitMap[newI] = hitMap[i];
438                     p0[newI] = p0[i];
439                     p1[newI] = p1[i];
440                 }
441                 newI++;
442             }
443         }
445         // All done? Note that this decision should be synchronised
446         if (newI == 0)
447         {
448             break;
449         }
451         // Trim and continue
452         hitMap.setSize(newI);
453         p0.setSize(newI);
454         p1.setSize(newI);
455         intersectInfo.setSize(newI);
456     }
460 void Foam::searchableSurfacesQueries::findAllIntersections
462     const PtrList<searchableSurface>& allSurfaces,
463     const labelList& surfacesToTest,
464     const pointField& start,
465     const pointField& end,
466     labelListList& hitSurfaces,
467     List<List<pointIndexHit> >& hitInfo
470     // Note: maybe move the single-surface all intersections test into
471     // searchable surface? Some of the tolerance issues might be
472     // lessened.
474     // 2. Currently calling searchableSurface::findLine with start==end
475     //    is expected to find no intersection. Problem if it does.
477     hitSurfaces.setSize(start.size());
478     hitInfo.setSize(start.size());
480     if (surfacesToTest.empty())
481     {
482         return;
483     }
485     // Test first surface
486     allSurfaces[surfacesToTest[0]].findLineAll(start, end, hitInfo);
488     // Set hitSurfaces and distance
489     List<scalarList> hitDistSqr(hitInfo.size());
490     forAll(hitInfo, pointI)
491     {
492         const List<pointIndexHit>& pHits = hitInfo[pointI];
494         labelList& pSurfaces = hitSurfaces[pointI];
495         pSurfaces.setSize(pHits.size());
496         pSurfaces = 0;
498         scalarList& pDistSqr = hitDistSqr[pointI];
499         pDistSqr.setSize(pHits.size());
500         forAll(pHits, i)
501         {
502             pDistSqr[i] = magSqr(pHits[i].hitPoint() - start[pointI]);
503         }
504     }
507     if (surfacesToTest.size() > 1)
508     {
509         // Small vector to increment start vector by to find next intersection
510         // along line. Constant factor added to make sure that start==end still
511         // ends iteration in findAllIntersections. Also SMALL is just slightly
512         // too small.
513         const vectorField smallVec
514         (
515             1E2*SMALL*(end-start)
516           + vector(ROOTVSMALL,ROOTVSMALL,ROOTVSMALL)
517         );
519         // Tolerance used to check whether points are equal. Note: used to
520         // compare distance^2. Note that we use the maximum possible tolerance
521         // (reached at intersections close to the end point)
522         const scalarField mergeDist(2*mag(smallVec)*mag(end-start));
524         // Test the other surfaces and merge (according to distance from start).
525         for (label testI = 1; testI < surfacesToTest.size(); testI++)
526         {
527             List<List<pointIndexHit> > surfHits;
528             allSurfaces[surfacesToTest[testI]].findLineAll
529             (
530                 start,
531                 end,
532                 surfHits
533             );
535             forAll(surfHits, pointI)
536             {
537                 mergeHits
538                 (
539                     start[pointI],          // Current segment
540                     mergeDist[pointI],
542                     testI,                  // Surface and its hits
543                     surfHits[pointI],
545                     hitSurfaces[pointI],    // Merge into overall hit info
546                     hitInfo[pointI],
547                     hitDistSqr[pointI]
548                 );
549             }
550         }
551     }
555 //// Find intersections of edge nearest to both endpoints.
556 //void Foam::searchableSurfacesQueries::findNearestIntersection
558 //    const PtrList<searchableSurface>& allSurfaces,
559 //    const labelList& surfacesToTest,
560 //    const pointField& start,
561 //    const pointField& end,
563 //    labelList& surface1,
564 //    List<pointIndexHit>& hit1,
565 //    labelList& surface2,
566 //    List<pointIndexHit>& hit2
569 //    // 1. intersection from start to end
570 //    // ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
572 //    // Initialize arguments
573 //    surface1.setSize(start.size());
574 //    surface1 = -1;
575 //    hit1.setSize(start.size());
577 //    // Current end of segment to test.
578 //    pointField nearest(end);
579 //    // Work array
580 //    List<pointIndexHit> nearestInfo(start.size());
582 //    forAll(surfacesToTest, testI)
583 //    {
584 //        // See if any intersection between start and current nearest
585 //        allSurfaces[surfacesToTest[testI]].findLine
586 //        (
587 //            start,
588 //            nearest,
589 //            nearestInfo
590 //        );
592 //        forAll(nearestInfo, pointI)
593 //        {
594 //            if (nearestInfo[pointI].hit())
595 //            {
596 //                hit1[pointI] = nearestInfo[pointI];
597 //                surface1[pointI] = testI;
598 //                nearest[pointI] = hit1[pointI].hitPoint();
599 //            }
600 //        }
601 //    }
604 //    // 2. intersection from end to last intersection
605 //    // ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
607 //    // Find the nearest intersection from end to start. Note that we
608 //    // initialize to the first intersection (if any).
609 //    surface2 = surface1;
610 //    hit2 = hit1;
612 //    // Set current end of segment to test.
613 //    forAll(nearest, pointI)
614 //    {
615 //        if (hit1[pointI].hit())
616 //        {
617 //            nearest[pointI] = hit1[pointI].hitPoint();
618 //        }
619 //        else
620 //        {
621 //            // Disable testing by setting to end.
622 //            nearest[pointI] = end[pointI];
623 //        }
624 //    }
626 //    forAll(surfacesToTest, testI)
627 //    {
628 //        // See if any intersection between end and current nearest
629 //        allSurfaces[surfacesToTest[i]].findLine(end, nearest, nearestInfo);
631 //        forAll(nearestInfo, pointI)
632 //        {
633 //            if (nearestInfo[pointI].hit())
634 //            {
635 //                hit2[pointI] = nearestInfo[pointI];
636 //                surface2[pointI] = testI;
637 //                nearest[pointI] = hit2[pointI].hitPoint();
638 //            }
639 //        }
640 //    }
644 // Find nearest. Return -1 or nearest point
645 void Foam::searchableSurfacesQueries::findNearest
647     const PtrList<searchableSurface>& allSurfaces,
648     const labelList& surfacesToTest,
649     const pointField& samples,
650     const scalarField& nearestDistSqr,
651     labelList& nearestSurfaces,
652     List<pointIndexHit>& nearestInfo
655     // Initialise
656     nearestSurfaces.setSize(samples.size());
657     nearestSurfaces = -1;
658     nearestInfo.setSize(samples.size());
660     // Work arrays
661     scalarField minDistSqr(nearestDistSqr);
662     List<pointIndexHit> hitInfo(samples.size());
664     forAll(surfacesToTest, testI)
665     {
666         allSurfaces[surfacesToTest[testI]].findNearest
667         (
668             samples,
669             minDistSqr,
670             hitInfo
671         );
673         // Update minDistSqr and arguments
674         forAll(hitInfo, pointI)
675         {
676             if (hitInfo[pointI].hit())
677             {
678                 minDistSqr[pointI] = magSqr
679                 (
680                     hitInfo[pointI].hitPoint()
681                   - samples[pointI]
682                 );
683                 nearestInfo[pointI] = hitInfo[pointI];
684                 nearestSurfaces[pointI] = testI;
685             }
686         }
687     }
691 //- Calculate point which is on a set of surfaces.
692 Foam::pointIndexHit Foam::searchableSurfacesQueries::facesIntersection
694     const PtrList<searchableSurface>& allSurfaces,
695     const labelList& surfacesToTest,
696     const scalar initDistSqr,
697     const scalar convergenceDistSqr,
698     const point& start
701     // Get four starting points. Take these as the projection of the
702     // starting point onto the surfaces and the mid point
703     List<point> nearest(surfacesToTest.size()+1);
705     point sumNearest = vector::zero;
707     forAll(surfacesToTest, i)
708     {
709         pointIndexHit hit
710         (
711             tempFindNearest(allSurfaces[surfacesToTest[i]], start, initDistSqr)
712         );
714         if (hit.hit())
715         {
716             nearest[i] = hit.hitPoint();
717             sumNearest += nearest[i];
718         }
719         else
720         {
721             FatalErrorIn
722             (
723                 "searchableSurfacesQueries::facesIntersection"
724                 "(const labelList&, const scalar, const scalar, const point&)"
725             )   << "Did not find point within distance "
726                 << initDistSqr << " of starting point " << start
727                 << " on surface "
728                 << allSurfaces[surfacesToTest[i]].IOobject::name()
729                 << abort(FatalError);
730         }
731     }
733     nearest[nearest.size()-1] = sumNearest / surfacesToTest.size();
736     // Get the sum of distances (initial evaluation)
737     List<scalar> nearestDist(nearest.size());
739     forAll(nearestDist, i)
740     {
741         nearestDist[i] = sumDistSqr
742         (
743             allSurfaces,
744             surfacesToTest,
745             initDistSqr,
746             nearest[i]
747         );
748     }
751     //- Downhill Simplex method
753     bool converged = morphTet
754     (
755         allSurfaces,
756         surfacesToTest,
757         initDistSqr,
758         convergenceDistSqr,
759         2000,
760         nearest,
761         nearestDist
762     );
765     pointIndexHit intersection;
767     if (converged)
768     {
769         // Project nearest onto 0th surface.
770         intersection = tempFindNearest
771         (
772             allSurfaces[surfacesToTest[0]],
773             nearest[0],
774             nearestDist[0]
775         );
776     }
778     //if (!intersection.hit())
779     //{
780     //    // Restart
781     //    scalar smallDist = Foam::sqr(convergenceDistSqr);
782     //    nearest[0] = intersection.hitPoint();
783     //    nearest[1] = nearest[0];
784     //    nearest[1].x() += smallDist;
785     //    nearest[2] = nearest[0];
786     //    nearest[2].y() += smallDist;
787     //    nearest[3] = nearest[0];
788     //    nearest[3].z() += smallDist;
789     //
790     //    forAll(nearestDist, i)
791     //    {
792     //        nearestDist[i] = sumDistSqr
793     //        (
794     //            surfacesToTest,
795     //            initDistSqr,
796     //            nearest[i]
797     //        );
798     //    }
799     //
800     //    intersection = morphTet
801     //    (
802     //        allSurfaces,
803     //        surfacesToTest,
804     //        initDistSqr,
805     //        convergenceDistSqr,
806     //        1000,
807     //        nearest,
808     //        nearestDist
809     //    );
810     //}
812     return intersection;
817 // ************************************************************************* //