GGI with octree search: fix bounding box extension
[OpenFOAM-1.6-ext.git] / etc / settings.sh
blob13d068e1a5e2e5cc36c7c32df0f7409fe910a689
1 #----------------------------------*-sh-*--------------------------------------
2 # ========= |
3 # \\ / F ield | OpenFOAM: The Open Source CFD Toolbox
4 # \\ / O peration |
5 # \\ / A nd | Copyright held by original author
6 # \\/ M anipulation |
7 #------------------------------------------------------------------------------
8 # License
9 # This file is part of OpenFOAM.
11 # OpenFOAM is free software; you can redistribute it and/or modify it
12 # under the terms of the GNU General Public License as published by the
13 # Free Software Foundation; either version 2 of the License, or (at your
14 # option) any later version.
16 # OpenFOAM is distributed in the hope that it will be useful, but WITHOUT
17 # ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
18 # FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License
19 # for more details.
21 # You should have received a copy of the GNU General Public License
22 # along with OpenFOAM; if not, write to the Free Software Foundation,
23 # Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA
25 # Script
26 # etc/settings.sh
28 # Description
29 # Startup file for OpenFOAM
30 # Sourced from OpenFOAM-??/etc/bashrc
32 #------------------------------------------------------------------------------
34 # prefix to PATH
35 _foamAddPath()
37 while [ $# -ge 1 ]
39 export PATH=$1:$PATH
40 shift
41 done
44 # prefix to LD_LIBRARY_PATH
45 _foamAddLib()
47 while [ $# -ge 1 ]
49 export LD_LIBRARY_PATH=$1:$LD_LIBRARY_PATH
50 if [ "$WM_ARCH_BASE" == "darwin" ]
51 then
52 export DYLD_LIBRARY_PATH=$1:$DYLD_LIBRARY_PATH
54 shift
55 done
58 # Source files, possibly with some verbosity
59 # Yes, this is the same definition as in the file etc/bash
60 # We need that definition available for scripts sourcing
61 # settings.sh directly.
62 _foamSource()
64 while [ $# -ge 1 ]
66 [ "$FOAM_VERBOSE" -a "$PS1" ] && echo "Sourcing: $1"
67 . $1
68 shift
69 done
72 # location of the jobControl directory
73 export FOAM_JOB_DIR=$WM_PROJECT_INST_DIR/jobControl
75 # wmake configuration
76 export WM_DIR=$WM_PROJECT_DIR/wmake
77 export WM_LINK_LANGUAGE=c++
78 export WM_OPTIONS=$WM_ARCH$WM_COMPILER$WM_PRECISION_OPTION$WM_COMPILE_OPTION
79 export PATH=$WM_DIR:$PATH
81 #export WM_DECOMP_INC=-DCELL_DECOMP
82 #export WM_DECOMP_LIBS="-lcellDecompFiniteElement -lcellDecompositionMotionSolver"
83 export WM_DECOMP_INC=-DFACE_DECOMP
84 export WM_DECOMP_LIBS="-lfaceDecompFiniteElement -lfaceDecompositionMotionSolver"
86 # base configuration
87 export FOAM_APP=$WM_PROJECT_DIR/applications
88 export FOAM_APPBIN=$WM_PROJECT_DIR/applications/bin/$WM_OPTIONS
89 export FOAM_LIB=$WM_PROJECT_DIR/lib
90 export FOAM_LIBBIN=$WM_PROJECT_DIR/lib/$WM_OPTIONS
91 export FOAM_SRC=$WM_PROJECT_DIR/src
93 # shared site configuration - similar naming convention as ~OpenFOAM expansion
94 export FOAM_SITE_APPBIN=$WM_PROJECT_INST_DIR/site/$WM_PROJECT_VERSION/bin/$WM_OPTIONS
95 export FOAM_SITE_LIBBIN=$WM_PROJECT_INST_DIR/site/$WM_PROJECT_VERSION/lib/$WM_OPTIONS
97 # user configuration
98 export FOAM_USER_APPBIN=$WM_PROJECT_USER_DIR/applications/bin/$WM_OPTIONS
99 export FOAM_USER_LIBBIN=$WM_PROJECT_USER_DIR/lib/$WM_OPTIONS
101 # convenience
102 export FOAM_TUTORIALS=$WM_PROJECT_DIR/tutorials
103 export FOAM_UTILITIES=$FOAM_APP/utilities
104 export FOAM_SOLVERS=$FOAM_APP/solvers
105 export FOAM_RUN=$WM_PROJECT_USER_DIR/run
107 # add OpenFOAM scripts and wmake to the path
108 export PATH=$WM_DIR:$WM_PROJECT_DIR/bin:$PATH
110 _foamAddPath $FOAM_APPBIN $FOAM_SITE_APPBIN $FOAM_USER_APPBIN
111 # Make sure to pick up dummy versions of external libraries last
112 _foamAddLib $FOAM_LIBBIN/dummy
113 _foamAddLib $FOAM_LIBBIN $FOAM_SITE_LIBBIN $FOAM_USER_LIBBIN
116 # Compiler settings
117 # ~~~~~~~~~~~~~~~~~
118 unset compilerBin compilerLib
120 # Select compiler installation
121 # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~
122 # compilerInstall = OpenFOAM | System
123 #compilerInstall=OpenFOAM
124 compilerInstall=System
126 case "${compilerInstall:-OpenFOAM}" in
127 OpenFOAM)
128 case "$WM_COMPILER" in
129 Gcc)
130 export WM_COMPILER_DIR=$WM_THIRD_PARTY_DIR/gcc-4.3.3/platforms/$WM_ARCH$WM_COMPILER_ARCH
131 _foamAddLib $WM_THIRD_PARTY_DIR/mpfr-2.4.1/platforms/$WM_ARCH$WM_COMPILER_ARCH/lib
132 _foamAddLib $WM_THIRD_PARTY_DIR/gmp-4.2.4/platforms/$WM_ARCH$WM_COMPILER_ARCH/lib
134 Gcc43)
135 export WM_COMPILER_DIR=$WM_THIRD_PARTY_DIR/gcc-4.3.3/platforms/$WM_ARCH$WM_COMPILER_ARCH
136 _foamAddLib $WM_THIRD_PARTY_DIR/mpfr-2.4.1/platforms/$WM_ARCH$WM_COMPILER_ARCH/lib
137 _foamAddLib $WM_THIRD_PARTY_DIR/gmp-4.2.4/platforms/$WM_ARCH$WM_COMPILER_ARCH/lib
139 Gcc42)
140 export WM_COMPILER_DIR=$WM_THIRD_PARTY_DIR/gcc-4.2.4/platforms/$WM_ARCH$WM_COMPILER_ARCH
142 esac
144 # Check that the compiler directory can be found
145 if [ ! -d "$WM_COMPILER_DIR" ]
146 then
147 echo
148 echo "Warning in $WM_PROJECT_DIR/etc/settings.sh:"
149 echo " Cannot find $WM_COMPILER_DIR installation."
150 echo " Please install this compiler version or if you wish to use the system compiler,"
151 echo " change the 'compilerInstall' setting to 'System' in this file"
152 echo
155 compilerBin=$WM_COMPILER_DIR/bin
156 compilerLib=$WM_COMPILER_DIR/lib$WM_COMPILER_LIB_ARCH:$WM_COMPILER_DIR/lib
158 esac
160 if [ -d "$compilerBin" ]
161 then
162 _foamAddPath $compilerBin
163 _foamAddLib $compilerLib
166 unset compilerBin compilerLib compilerInstall
169 case "$WM_COMPILER" in
170 Gcc)
171 export WM_CC='gcc'
172 export WM_CXX='g++'
174 Icc)
175 export WM_CC='icc'
176 export WM_CXX='icpc'
178 esac
181 # Communications library
182 # ~~~~~~~~~~~~~~~~~~~~~~
184 unset MPI_ARCH_PATH
185 mpi_version=unknown
186 case "$WM_MPLIB" in
187 OPENMPI)
188 if [ -e $WM_THIRD_PARTY_DIR/packages/openmpi-1.4.3 ]
189 then
190 mpi_version=openmpi-1.4.3
191 if [ "$FOAM_VERBOSE" -a "$PS1" ]
192 then
193 echo "Using openmpi-1.4.3 from the ThirdParty package: $WM_THIRD_PARTY_DIR/packages/$mpi_version"
195 _foamSource $WM_THIRD_PARTY_DIR/packages/$mpi_version/platforms/$WM_OPTIONS/etc/$mpi_version.sh
197 elif [ -e $WM_THIRD_PARTY_DIR/packages/openmpi-1.5 ]
198 then
199 mpi_version=openmpi-1.5
200 if [ "$FOAM_VERBOSE" -a "$PS1" ]
201 then
202 echo "Using openmpi-1.5 from the ThirdParty package: $WM_THIRD_PARTY_DIR/packages/$mpi_version"
204 _foamSource $WM_THIRD_PARTY_DIR/packages/$mpi_version/platforms/$WM_OPTIONS/etc/$mpi_version.sh
207 export FOAM_MPI_LIBBIN=$FOAM_LIBBIN/$mpi_version
208 unset mpi_version
211 SYSTEMOPENMPI)
212 mpi_version=openmpi-system
214 # make sure not the "old" mpi is used
215 # Not sure if this is necessary anymore.
216 # export OPAL_PREFIX=
218 # Make sure OPENMPI_BIN_DIR is set and valid
219 if [ -n "${OPENMPI_BIN_DIR}" ] && [ -d "${OPENMPI_BIN_DIR}" ]
220 then
221 # User defined value specified for OPENMPI_BIN_DIR
223 # WARNING:
224 # We assume this path specified by $OPENMPI_BIN_DIR is valid
225 # We assume the command mpicc is located somewhere under this path
226 # We assume the file mpi.h is located somewhere under this path
228 # Otherwise, please double check your openmpi installation, you are
229 # probably missing the openmpi runtime and/or development packages
230 # available for your system.
232 _foamAddPath $OPENMPI_BIN_DIR
233 else
234 # Here, we assume your environment is already set for running
235 # and developping with openmpi.
237 # Initialize OPENMPI_BIN_DIR using the path to mpicc
238 export OPENMPI_BIN_DIR=$(dirname `which mpicc`)
241 # Make sure OPENMPI_LIB_DIR is set
242 if [ ! -n "${OPENMPI_LIB_DIR}" ]
243 then
244 # Initialize OPENMPI_LIB_DIR using the path to mpicc
245 export OPENMPI_LIB_DIR="`mpicc --showme:libdirs`"
248 # Make sure the dynamic libraries are accessible
249 [ -n "${OPENMPI_LIB_DIR}" ] && _foamAddLib $OPENMPI_LIB_DIR
251 export MPI_HOME=`dirname $OPENMPI_BIN_DIR`
252 export MPI_ARCH_PATH=$MPI_HOME
253 export OPAL_PREFIX=$MPI_ARCH_PATH
255 # We initialize the rest of the environment using mpicc --showme:
256 [ ! -n "${OPENMPI_INCLUDE_DIR}" ] && export OPENMPI_INCLUDE_DIR="`mpicc --showme:incdirs`"
257 [ ! -n "${OPENMPI_COMPILE_FLAGS}" ] && export OPENMPI_COMPILE_FLAGS="`mpicc --showme:compile`"
258 [ ! -n "${OPENMPI_LINK_FLAGS}" ] && export OPENMPI_LINK_FLAGS="`mpicc --showme:link`"
261 # WARNING: We assume the file mpi.h will be available under the directories identified
262 # by the variable $OPENMPI_INCLUDE_DIR. Otherwise, please double check your
263 # system openmpi installation.
265 # Set compilation flags here instead of in wmake/rules/../mplibSYSTEMOPENMPI
266 export PINC=$OPENMPI_COMPILE_FLAGS
267 export PLIBS=$OPENMPI_LINK_FLAGS
269 # No longer needed, but we keep this as a reference, just in case...
270 #libDir=`echo "$PLIBS" | sed -e 's/.*-L\([^ ]*\).*/\1/'`
271 #_foamAddLib $libDir
273 if [ "$FOAM_VERBOSE" -a "$PS1" ]
274 then
275 echo "Using system installed OpenMPI:"
276 echo " OPENMPI_BIN_DIR : $OPENMPI_BIN_DIR"
277 echo " OPENMPI_LIB_DIR : $OPENMPI_LIB_DIR"
278 echo " OPENMPI_INCLUDE_DIR : $OPENMPI_INCLUDE_DIR"
279 echo " OPENMPI_COMPILE_FLAGS : $OPENMPI_COMPILE_FLAGS"
280 echo " OPENMPI_LINK_FLAGS : $OPENMPI_LINK_FLAGS"
281 echo ""
282 echo " MPI_HOME : $MPI_HOME"
283 echo " MPI_ARCH_PATH : $MPI_ARCH_PATH"
284 echo " OPAL_PREFIX : $OPAL_PREFIX"
285 echo " PINC : $PINC"
286 echo " PLIBS : $PLIBS"
289 export FOAM_MPI_LIBBIN=$FOAM_LIBBIN/$mpi_version
290 unset mpi_version
293 MPICH)
294 mpi_version=mpich-1.2.4
295 export MPI_HOME=$WM_THIRD_PARTY_DIR/$mpi_version
296 export MPI_ARCH_PATH=$MPI_HOME/platforms/$WM_OPTIONS
297 export MPICH_ROOT=$MPI_ARCH_PATH
299 _foamAddPath $MPI_ARCH_PATH/bin
300 _foamAddLib $MPI_ARCH_PATH/lib
302 export FOAM_MPI_LIBBIN=$FOAM_LIBBIN/$mpi_version
303 unset mpi_version
306 MPICH-GM)
307 export MPI_ARCH_PATH=/opt/mpi
308 export MPICH_PATH=$MPI_ARCH_PATH
309 export MPICH_ROOT=$MPI_ARCH_PATH
310 export GM_LIB_PATH=/opt/gm/lib64
312 _foamAddPath $MPI_ARCH_PATH/bin
313 _foamAddLib $MPI_ARCH_PATH/lib
314 _foamAddLib $GM_LIB_PATH
316 export FOAM_MPI_LIBBIN=$FOAM_LIBBIN/mpich-gm
319 HPMPI)
320 export MPI_HOME=/opt/hpmpi
321 export MPI_ARCH_PATH=$MPI_HOME
322 export MPICH_ROOT=$MPI_ARCH_PATH
324 _foamAddPath $MPI_ARCH_PATH/bin
326 case `uname -m` in
327 i686)
328 _foamAddLib $MPI_ARCH_PATH/lib/linux_ia32
331 x86_64)
332 _foamAddLib $MPI_ARCH_PATH/lib/linux_amd64
334 ia64)
335 _foamAddLib $MPI_ARCH_PATH/lib/linux_ia64
338 echo Unknown processor type `uname -m` for Linux
340 esac
342 export FOAM_MPI_LIBBIN=$FOAM_LIBBIN/hpmpi
345 GAMMA)
346 export MPI_ARCH_PATH=/usr
347 export FOAM_MPI_LIBBIN=$FOAM_LIBBIN/gamma
350 MPI)
351 export MPI_ARCH_PATH=/opt/mpi
352 export FOAM_MPI_LIBBIN=$FOAM_LIBBIN/mpi
355 FJMPI)
356 export MPI_ARCH_PATH=/opt/FJSVmpi2
357 export FOAM_MPI_LIBBIN=$FOAM_LIBBIN/mpi
359 _foamAddPath $MPI_ARCH_PATH/bin
360 _foamAddLib $MPI_ARCH_PATH/lib/sparcv9
361 _foamAddLib /opt/FSUNf90/lib/sparcv9
362 _foamAddLib /opt/FJSVpnidt/lib
365 QSMPI)
366 export MPI_ARCH_PATH=/usr/lib/mpi
367 export FOAM_MPI_LIBBIN=$FOAM_LIBBIN/qsmpi
369 _foamAddPath $MPI_ARCH_PATH/bin
370 _foamAddLib $MPI_ARCH_PATH/lib
375 export FOAM_MPI_LIBBIN=$FOAM_LIBBIN/dummy
377 esac
379 _foamAddLib $FOAM_MPI_LIBBIN
382 # Set the minimum MPI buffer size (used by all platforms except SGI MPI)
383 # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
384 minBufferSize=20000000
386 if [ "${MPI_BUFFER_SIZE:=$minBufferSize}" -lt $minBufferSize ]
387 then
388 MPI_BUFFER_SIZE=$minBufferSize
390 export MPI_BUFFER_SIZE
393 # CGAL library if available
394 # ~~~~~~~~~~~~~~~~~~~~~~~~~
395 [ -d "$CGAL_LIB_DIR" ] && _foamAddLib $CGAL_LIB_DIR
398 # Switch on the hoard memory allocator if available
399 # ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
400 #if [ -f $FOAM_LIBBIN/libhoard.so ]
401 #then
402 # export LD_PRELOAD=$FOAM_LIBBIN/libhoard.so:$LD_PRELOAD
405 # HOARD seems to crash Paraview on Mac OS X 10.6
406 #if [ -f $FOAM_LIBBIN/libhoard.dylib ]
407 #then
408 # if [ -z "$DYLD_INSERT_LIBRARIES" ]
409 # then
410 # export DYLD_INSERT_LIBRARIES=$FOAM_LIBBIN/libhoard.dylib
411 # else
412 # export DYLD_INSERT_LIBRARIES=$FOAM_LIBBIN/libhoard.dylib:$DYLD_INSERT_LIBRARIES
413 # fi
417 # Third party packages
419 # In order to use a pre-installed version of the ThirdParty packages, just set the
420 # appropriate XXX_SYSTEM environment variable for a given package in your prefs.sh
421 # file in order to disable the sourcing of the ThirdParty version of the same package.
423 # Load Mesquite library
424 # ~~~~~~~~~~~~~~~~~~~~~~
425 [ -z "$MESQUITE_SYSTEM" ] && [ -e $WM_THIRD_PARTY_DIR/packages/mesquite-2.1.2 ] && {
426 _foamSource $WM_THIRD_PARTY_DIR/packages/mesquite-2.1.2/platforms/$WM_OPTIONS/etc/mesquite-2.1.2.sh
428 [ "$FOAM_VERBOSE" -a "$PS1" ] && echo " MESQUITE_DIR is initialized to: $MESQUITE_DIR"
431 # Load Metis library
432 # ~~~~~~~~~~~~~~~~~~
433 [ -z "$METIS_SYSTEM" ] && [ -d $WM_THIRD_PARTY_DIR/packages/metis-5.0pre2 ] && {
434 _foamSource $WM_THIRD_PARTY_DIR/packages/metis-5.0pre2/platforms/$WM_OPTIONS/etc/metis-5.0pre2.sh
436 [ "$FOAM_VERBOSE" -a "$PS1" ] && echo " METIS_DIR is initialized to: $METIS_DIR"
439 # Load ParMetis library
440 # ~~~~~~~~~~~~~~~~~~~~~
441 [ -z "$PARMETIS_SYSTEM" ] && [ -e $WM_THIRD_PARTY_DIR/packages/ParMetis-3.1.1 ] && {
442 _foamSource $WM_THIRD_PARTY_DIR/packages/ParMetis-3.1.1/platforms/$WM_OPTIONS/etc/ParMetis-3.1.1.sh
444 [ "$FOAM_VERBOSE" -a "$PS1" ] && echo " PARMETIS_DIR is initialized to: $PARMETIS_DIR"
447 # Load ParMGridGen library
448 # ~~~~~~~~~~~~~~~~~~~~~~~~~
449 [ -z "$PARMGRIDGEN_SYSTEM" ] && [ -e $WM_THIRD_PARTY_DIR/packages/ParMGridGen-1.0 ] && {
450 _foamSource $WM_THIRD_PARTY_DIR/packages/ParMGridGen-1.0/platforms/$WM_OPTIONS/etc/ParMGridGen-1.0.sh
452 [ "$FOAM_VERBOSE" -a "$PS1" ] && echo " PARMGRIDGEN_DIR is initialized to: $PARMGRIDGEN_DIR"
455 # Load Libccmio library
456 # ~~~~~~~~~~~~~~~~~~~~~
457 [ -z "$LIBCCMIO_SYSTEM" ] && [ -e $WM_THIRD_PARTY_DIR/packages/libccmio-2.6.1 ] && {
458 _foamSource $WM_THIRD_PARTY_DIR/packages/libccmio-2.6.1/platforms/$WM_OPTIONS/etc/libccmio-2.6.1.sh
460 [ "$FOAM_VERBOSE" -a "$PS1" ] && echo " LIBCCMIO_DIR is initialized to: $LIBCCMIO_DIR"
463 # Load Scotch library
464 # ~~~~~~~~~~~~~~~~~~~
465 [ -z "$SCOTCH_SYSTEM" ] && [ -e $WM_THIRD_PARTY_DIR/packages/scotch-5.1.10b ] && {
466 _foamSource $WM_THIRD_PARTY_DIR/packages/scotch-5.1.10b/platforms/$WM_OPTIONS/etc/scotch-5.1.10b.sh
468 [ "$FOAM_VERBOSE" -a "$PS1" ] && echo " SCOTCH_DIR is initialized to: $SCOTCH_DIR"
471 # Load cmake
472 # ~~~~~~~~~~
473 [ -z "$CMAKE_SYSTEM" ] && [ -e $WM_THIRD_PARTY_DIR/packages/cmake-2.8.3 ] && {
474 _foamSource $WM_THIRD_PARTY_DIR/packages/cmake-2.8.3/platforms/$WM_OPTIONS/etc/cmake-2.8.3.sh
476 [ "$FOAM_VERBOSE" -a "$PS1" ] && echo " CMAKE_DIR is initialized to: $CMAKE_DIR"
479 # Load Python
480 # ~~~~~~~~~~~
481 [ -z "$PYTHON_SYSTEM" ] && [ -e $WM_THIRD_PARTY_DIR/packages/Python-2.7 ] && {
482 _foamSource $WM_THIRD_PARTY_DIR/packages/Python-2.7/platforms/$WM_OPTIONS/etc/Python-2.7.sh
484 [ "$FOAM_VERBOSE" -a "$PS1" ] && echo " PYTHON_DIR is initialized to: $PYTHON_DIR"
487 # Load QT
488 # ~~~~~~~
489 [ ! -z "$QT_THIRD_PARTY" ] && [ -e $WM_THIRD_PARTY_DIR/packages/qt-everywhere-opensource-src-4.7.0 ] && {
490 _foamSource $WM_THIRD_PARTY_DIR/packages/qt-everywhere-opensource-src-4.7.0/platforms/$WM_OPTIONS/etc/qt-everywhere-opensource-src-4.7.0.sh
492 [ "$FOAM_VERBOSE" -a "$PS1" ] && echo " QT_DIR is initialized to: $QT_DIR"
495 # Load ParaView
496 # ~~~~~~~~~~~~~
497 [ -z "$PARAVIEW_SYSTEM" ] && [ -e $WM_THIRD_PARTY_DIR/packages/ParaView-3.8.1 ] && {
498 _foamSource $WM_THIRD_PARTY_DIR/packages/ParaView-3.8.1/platforms/$WM_OPTIONS/etc/ParaView-3.8.1.sh
500 [ "$FOAM_VERBOSE" -a "$PS1" ] && echo " PARAVIEW_DIR is initialized to: $PARAVIEW_DIR"
503 # cleanup environment:
504 # ~~~~~~~~~~~~~~~~~~~~
505 unset _foamAddPath _foamAddLib minBufferSize
507 # -----------------------------------------------------------------------------