html/pontus/scm_options.php

   1   <h3 class="heading1">Options:</h3>
   2
   3     The options are given here in their long form. Any option may be
   4     abbreviated to any nonconflicting prefix. The -threads option may
   5     be abbreviated to <span class="style2">-thr</span> but <span class="style2">-debug</span> may not be abbreviated to <span class="style2">-d</span>
   6     because it conflicts with <span class="style2">-debug_packages</span> and <span class="style2">-debug_subroutines</span>.
   7
   8     The following options are valid:
   9     <p class="style2">-config_file</p>
  10
  11     A path and file name to an scm configuration file.
  12
  13
  14     <p class="style2">-do_not_drop</p>
  15
  16     Since the number of columns are restricted to 20 for NONMEM it is
  17     necessary to minimize the number of undropped columns. The scm
  18     utility uses the '=DROP' syntax of NONMEM to exclude the covariate
  19     columns that are not used. If some covariates are used in the PK
  20     or PRED code in the basic model you must list them using the
  21     do_not_drop option to prevent them from being dropped.
  22
  23
  24     <p class="style2">-fix</p>
  25
  26
  27     <p class="style2">-global_init</p>
  28
  29
  30     <p class="style2">-gof</p>
  31
  32
  33     <p class="style2">-h | -?</p>
  34
  35     With -h or -? scm will print a list of options and exit.
  36
  37
  38     <p class="style2">-help</p>
  39
  40     With -help scm will print this, longer, help message.
  41
  42
  43     <p class="style2">-logfile</p>
  44
  45     The name of the logfile.
  46
  47
  48     <p class="style2">-model</p>
  49
  50     The name of the basic model file, without any parameter-covariate
  51     relations included.
  52
  53
  54     <p class="style2">-p_backward</p>
  55
  56     Using the p_backward option, you can specify the p-value to use
  57     for the backward deletion.
  58
  59
  60     <p class="style2">-p_forward</p>
  61
  62     Using the p_forward option, you can specify the p-value to use for
  63     the forward selection.
  64
  65
  66     <p class="style2">-p_value</p>
  67
  68     Use this option to set the p_value for both forward and backward
  69     steps.
  70
  71
  72     <p class="style2">-search_direction</p>
  73
  74     Which search task to perform: backward, forward or both is allowed.
  75
  76