no placeholders in labels
[PsN.git] / html / create_extra_data_model_docs.php
blob13d7cfbb3ef3387c7cd21467c6cc3dab7a0ca1be
1 <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
2 <html>
3 <head>
4 <title>PsN :: Documentation :: create_extra_data_model</title>
5 <!--Adobe(R) LiveMotion(TM) 1.0 Generated JavaScript. Please do not edit. -->
6 <script>
8 <!--
10 function newImage(arg) {
12 if (document.images) {
14 rslt = new Image();
16 rslt.src = arg;
18 return rslt;
24 ImageArray = new Array;
26 var preloadFlag = false;
28 function preloadImages() {
30 if (document.images) {
32 ImageArray[ImageArray.length++] = newImage(/* OWNER('object', 'dflt') *//*URL*/'images/indexhome.jpg');
33 ImageArray[ImageArray.length++] = newImage(/* OWNER('object', 'movr') *//*URL*/'images/indexhomeov.jpg');
34 ImageArray[ImageArray.length++] = newImage(/* OWNER('object1', 'dflt') *//*URL*/'images/indexdocumentation.jpg');
35 ImageArray[ImageArray.length++] = newImage(/* OWNER('object1', 'movr') *//*URL*/'images/indexdocumentationov.jpg');
36 ImageArray[ImageArray.length++] = newImage(/* OWNER('object2', 'dflt') *//*URL*/'images/indexdownload.jpg');
37 ImageArray[ImageArray.length++] = newImage(/* OWNER('object2', 'movr') *//*URL*/'images/indexdownloadov.jpg');
38 ImageArray[ImageArray.length++] = newImage(/* OWNER('object3', 'dflt') *//*URL*/'images/indexbuglist.jpg');
39 ImageArray[ImageArray.length++] = newImage(/* OWNER('object3', 'movr') *//*URL*/'images/indexbuglistov.jpg');
40 ImageArray[ImageArray.length++] = newImage(/* OWNER('object4', 'dflt') *//*URL*/'images/indexmailing_list.jpg');
41 ImageArray[ImageArray.length++] = newImage(/* OWNER('object4', 'movr') *//*URL*/'images/indexmailing_listov.jpg');
42 preloadFlag = true;
45 function changeImages() {
46 if (document.images && (preloadFlag == true)) {
47 for (var i=0; i<changeImages.arguments.length; i+=2) {
48 document[changeImages.arguments[i]].src = changeImages.arguments[i+1];
52 // -->
53 </script><!-- End generated JavaScript. -->
54 <meta http-equiv="Content-Type"
55 content="text/html; charset=ISO-8859-1">
56 <style type="text/css">
57 <!--
58 body,td,th {
59 font-family: Helvetica, Arial, serif;
60 font-size: 12px;
61 color: #000000;
63 body {
64 margin-left: 6px;
65 margin-top: 0px;
66 margin-right: 0px;
67 margin-bottom: 0px;
68 background-image: url(gfx/bg.jpg);
70 .style1 {
71 font-size: 36px;
72 font-weight: bold;
74 .heading1 {
75 font-size: 16px;
76 font-weight: bold;
77 color: #333399;
78 margin-left: 40px;
80 a:link {
81 color: #656D9C;
82 text-decoration: none;
84 a:visited {
85 color: #656D9C;
86 text-decoration: none;
88 a:hover {
89 color: #AF9D49;
90 text-decoration: none;
92 a:active {
93 color: #656D9C;
94 text-decoration: none;
96 .style2 {font-family: "Courier New", Courier, mono}
97 -->
98 </style>
99 <script language="JavaScript" type="text/JavaScript">
100 <!--
101 function MM_reloadPage(init) { //reloads the window if Nav4 resized
102 if (init==true) with (navigator) {if ((appName=="Netscape")&&(parseInt(appVersion)==4)) {
103 document.MM_pgW=innerWidth; document.MM_pgH=innerHeight; onresize=MM_reloadPage; }}
104 else if (innerWidth!=document.MM_pgW || innerHeight!=document.MM_pgH) location.reload();
106 MM_reloadPage(true);
107 //-->
108 </script>
109 <meta content="Pontus Pihlgren" name="author">
110 </head>
111 <body onload="preloadImages();"
112 style="background-color: rgb(255, 255, 255);">
113 <!-- The table is not formatted nicely because some browsers cannot join images in table cells if there are any hard carriage returns in a TD. -->
114 <div id="Layer1"
115 style="position: absolute; left: 335px; top: 42px; width: 388px; height: 43px; z-index: 1; font-size: x-small;">
116 <div class="style1" align="right">Create_extra_data_model<br>
117 </div>
118 </div>
119 <div id="Layer2"
120 style="position: absolute; left: 226px; top: 188px; width: 497px; height: 431px; z-index: 2;">
121 <div align="justify">
122 <h3 class="heading1">Synopsis</h3>
123 <p class="style2">
124 $ create_extra_data_model<br>
125 --model='filename'<br>
126 --extra_data='extra_data_filename'<br>
127 --header='extra_data_header'<br>
128 --new_model_name='new_filename'
129 </p>
130 <h3 class="heading1">Description</h3>
131 <p>The create_extra_data_model utility is a Perl script that creates and adds the necessary code for additional data
132 files. This is useful when the number of columns exceeds 20 in your normal data set. With this utility the number of rows per individual is restricted to one. See the documentation for <a href="single_valued_columns_docs.php">single_valued_columns</a> on how to identify suitable columns for the extra data set. </p>
133 <h3 class="heading1">Options</h3>
134 <p><span class="style2">-model='filename'</span></p>
135 <p>Specify the name of your original model file through the <span class="style2">-model</span> option.</p>
136 <p><span class="style2"> -extra_data='extra_data_filename'</span></p>
137 <p>The name of the file holding the additional data file should be specified through the <span class="style2">-extra_data</span> option. </p>
138 <p><span class="style2">-header='extra_data_header'</span></p>
139 <p>The utility needs to know the names of the columns in the additional data file as they are used in the model. Specify this through the <span class="style2">-header</span> option. Note that no header row should be present in the extra data file itself. </p>
140 <p><span class="style2">-new_model_name='new_filename'</span></p>
141 <p>Specify the name of the new model through the <span class="style2">-new_model_name</span> option. </p>
142 <h3 class="heading1">Output</h3>
143 <p>The output from this utility is a new model file including the verbatim code necessary for reading additional data files.</p>
144 <h3 class="heading1">Example</h3>
145 <p class="style2"> $ create_extra_data_model --mod=pheno.mod --extra=cov.dta<br>
146 --header='ID,WGT,APGR' --new=pheno_extra.mod</p>
147 <p>&nbsp;</p>
148 </div>
149 </div>
150 <table border="0" cellpadding="0" cellspacing="0" width="780">
151 <tbody>
152 <tr>
153 <td height="600" width="780">
154 <table border="0" cellpadding="0" cellspacing="0" width="780">
155 <tbody>
156 <tr>
157 <td colspan="7" height="201" width="780"><img
158 src="images/indexpane1_1_.jpg" name="" alt="" border="0" height="201"
159 width="780"></td>
160 </tr>
161 <tr>
162 <td height="46" width="26"><img
163 src="images/indexpane1_2_.jpg" name="" alt="" border="0" height="46"
164 width="26"></td>
165 <td height="46" width="73"><a href="index.php"
166 onmouseover="changeImages(/*CMP*/ 'object', /*URL*/ 'images/indexhomeov.jpg'); return true;"
167 onmouseout="changeImages(/*CMP*/ 'object', /*URL*/ 'images/indexhome.jpg'); return true;"><img
168 src="images/indexhome.jpg" name="object" alt="Home" border="0"
169 height="46" width="73"></a></td>
170 <td height="46" width="11"><img
171 src="images/indexpane3_2_.jpg" name="" alt="" border="0" height="46"
172 width="11"></td>
173 <td height="46" width="25"><img
174 src="images/indexpane4_2_.jpg" name="" alt="" border="0" height="46"
175 width="25"></td>
176 <td height="46" width="15"><img
177 src="images/indexpane5_2_.jpg" name="" alt="" border="0" height="46"
178 width="15"></td>
179 <td height="46" width="40"><img
180 src="images/indexpane6_2_.jpg" name="" alt="" border="0" height="46"
181 width="40"></td>
182 <td height="46" width="590"><img
183 src="images/indexpane7_2_.jpg" name="" alt="" border="0" height="46"
184 width="590"></td>
185 </tr>
186 <tr>
187 <td colspan="7" height="7" width="780"><img
188 src="images/indexpane1_3_.jpg" name="" alt="" border="0" height="7"
189 width="780"></td>
190 </tr>
191 <tr>
192 <td height="46" width="26"><img
193 src="images/indexpane1_4_.jpg" name="" alt="" border="0" height="46"
194 width="26"></td>
195 <td colspan="5" height="46" width="164"><a href="docs.php"
196 onmouseover="changeImages(/*CMP*/ 'object1', /*URL*/ 'images/indexdocumentationov.jpg'); return true;"
197 onmouseout="changeImages(/*CMP*/ 'object1', /*URL*/ 'images/indexdocumentation.jpg'); return true;"><img
198 src="images/indexdocumentation.jpg" name="object1" alt="Documentation"
199 border="0" height="46" width="164"></a></td>
200 <td height="46" width="590"><img
201 src="images/indexpane7_4_.jpg" name="" alt="" border="0" height="46"
202 width="590"></td>
203 </tr>
204 <tr>
205 <td colspan="7" height="7" width="780"><img
206 src="images/indexpane1_5_.jpg" name="" alt="" border="0" height="7"
207 width="780"></td>
208 </tr>
209 <tr>
210 <td height="46" width="26"><img
211 src="images/indexpane1_6_.jpg" name="" alt="" border="0" height="46"
212 width="26"></td>
213 <td colspan="3" height="46" width="109"><a
214 href="download.php"
215 onmouseover="changeImages(/*CMP*/ 'object2', /*URL*/ 'images/indexdownloadov.jpg'); return true;"
216 onmouseout="changeImages(/*CMP*/ 'object2', /*URL*/ 'images/indexdownload.jpg'); return true;"><img
217 src="images/indexdownload.jpg" name="object2" alt="Download" border="0"
218 height="46" width="109"></a></td>
219 <td colspan="3" height="46" width="645"><img
220 src="images/indexpane5_6_.jpg" name="" alt="" border="0" height="46"
221 width="645"></td>
222 </tr>
223 <tr>
224 <td colspan="7" height="7" width="780"><img
225 src="images/indexpane1_7_.jpg" name="" alt="" border="0" height="7"
226 width="780"></td>
227 </tr>
228 <tr>
229 <td height="46" width="26"><img
230 src="images/indexpane1_8_.jpg" name="" alt="" border="0" height="46"
231 width="26"></td>
232 <td colspan="2" height="46" width="84"><a href="buglist.php"
233 onmouseover="changeImages(/*CMP*/ 'object3', /*URL*/ 'images/indexbuglistov.jpg'); return true;"
234 onmouseout="changeImages(/*CMP*/ 'object3', /*URL*/ 'images/indexbuglist.jpg'); return true;"><img
235 src="images/indexbuglist.jpg" name="object3" alt="Buglist" border="0"
236 height="46" width="84"></a></td>
237 <td colspan="4" height="46" width="670"><img
238 src="images/indexpane4_8_.jpg" name="" alt="" border="0" height="46"
239 width="670"></td>
240 </tr>
241 <tr>
242 <td colspan="7" height="7" width="780"><img
243 src="images/indexpane1_9_.jpg" name="" alt="" border="0" height="7"
244 width="780"></td>
245 </tr>
246 <tr>
247 <td height="46" width="26"><img
248 src="images/indexpane1_10_.jpg" name="" alt="" border="0" height="46"
249 width="26"></td>
250 <td colspan="4" height="46" width="124"><a href="list.php"
251 onmouseover="changeImages(/*CMP*/ 'object4', /*URL*/ 'images/indexmailing_listov.jpg'); return true;"
252 onmouseout="changeImages(/*CMP*/ 'object4', /*URL*/ 'images/indexmailing_list.jpg'); return true;"><img
253 src="images/indexmailing_list.jpg" name="object4" alt="Mailing List"
254 border="0" height="46" width="124"></a></td>
255 <td colspan="2" height="46" width="630"><img
256 src="images/indexpane6_10_.jpg" name="" alt="" border="0" height="46"
257 width="630"></td>
258 </tr>
259 <tr>
260 <td colspan="7" height="141" width="780"><img
261 src="images/indexpane1_11_.jpg" name="" alt="" border="0" height="141"
262 width="780"></td>
263 </tr>
264 </tbody>
265 </table>
266 </td>
267 </tr>
268 <tr>
269 <td><img src="images/is_single_pixel_gif.gif" alt="" height="1"
270 width="780"></td>
271 </tr>
272 </tbody>
273 </table>
274 <!--Adobe(R) LiveMotion(TM) DataMap1.0 DO NOT EDIT
275 end DataMap -->
276 </body>
277 </html>