html/index.php

   1 <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
   2 <html>
   3 <head>
   4   <title>PsN :: Home</title>
   5 <!--Adobe(R) LiveMotion(TM) 1.0 Generated JavaScript. Please do not edit. -->
   6   <script>
   7
   8 <!--
   9
  10 function newImage(arg) {
  11
  12 if (document.images) {
  13
  14 rslt = new Image();
  15
  16 rslt.src = arg;
  17
  18 return rslt;
  19
  20 }
  21
  22 }
  23
  24 ImageArray = new Array;
  25
  26 var preloadFlag = false;
  27
  28 function preloadImages() {
  29
  30 if (document.images) {
  31
  32 ImageArray[ImageArray.length++] = newImage(/* OWNER('object', 'dflt') *//*URL*/'images/indexhome.jpg');
  33 ImageArray[ImageArray.length++] = newImage(/* OWNER('object', 'movr') *//*URL*/'images/indexhomeov.jpg');
  34 ImageArray[ImageArray.length++] = newImage(/* OWNER('object1', 'dflt') *//*URL*/'images/indexdocumentation.jpg');
  35 ImageArray[ImageArray.length++] = newImage(/* OWNER('object1', 'movr') *//*URL*/'images/indexdocumentationov.jpg');
  36 ImageArray[ImageArray.length++] = newImage(/* OWNER('object2', 'dflt') *//*URL*/'images/indexdownload.jpg');
  37 ImageArray[ImageArray.length++] = newImage(/* OWNER('object2', 'movr') *//*URL*/'images/indexdownloadov.jpg');
  38
  39 ImageArray[ImageArray.length++] = newImage(/* OWNER('object3', 'dflt') *//*URL*/'images/indexbuglist.jpg');
  40 ImageArray[ImageArray.length++] = newImage(/* OWNER('object3', 'movr') *//*URL*/'images/indexbuglistov.jpg');
  41 ImageArray[ImageArray.length++] = newImage(/* OWNER('object4', 'dflt') *//*URL*/'images/indexmailing_list.jpg');
  42 ImageArray[ImageArray.length++] = newImage(/* OWNER('object4', 'movr') *//*URL*/'images/indexmailing_listov.jpg');
  43 preloadFlag = true;
  44 }
  45 }
  46 function changeImages() {
  47 if (document.images && (preloadFlag == true)) {
  48 for (var i=0; i<changeImages.arguments.length; i+=2) {
  49 document[changeImages.arguments[i]].src = changeImages.arguments[i+1];
  50 }
  51 }
  52 }
  53 // -->
  54   </script><!-- End generated JavaScript. -->
  55   <meta http-equiv="Content-Type"
  56  content="text/html; charset=iso-8859-1">
  57   <style type="text/css">
  58 <!--
  59 body,td,th {
  60 font-family: Helvetica, Arial, serif;
  61 font-size: 12px;
  62 color: #000000;
  63 }
  64 body {
  65 margin-left: 6px;
  66 margin-top: 0px;
  67 margin-right: 0px;
  68 margin-bottom: 0px;
  69 background-image: url(gfx/bg.jpg);
  70 }
  71 .style1 {
  72 font-size: 36px;
  73 font-weight: bold;
  74 }
  75 .heading1 {
  76 font-size: 16px;
  77 font-weight: bold;
  78 color: #333399;
  79 margin-left: 40px;
  80 }
  81 a:link {
  82 color: #656D9C;
  83 text-decoration: none;
  84 }
  85 a:visited {
  86 color: #656D9C;
  87 text-decoration: none;
  88 }
  89 a:hover {
  90 color: #AF9D49;
  91 text-decoration: none;
  92 }
  93 a:active {
  94 color: #656D9C;
  95 text-decoration: none;
  96 }
  97 .style2 {
  98 font-family: "Times New Roman", Times, serif;
  99 font-size: 13px;
 100 }
 101 -->
 102   </style>
 103   <script language="JavaScript" type="text/JavaScript">
 104 <!--
 105 function MM_reloadPage(init) { //reloads the window if Nav4 resized
 106 if (init==true) with (navigator) {if ((appName=="Netscape")&&(parseInt(appVersion)==4)) {
 107 document.MM_pgW=innerWidth; document.MM_pgH=innerHeight; onresize=MM_reloadPage; }}
 108 else if (innerWidth!=document.MM_pgW || innerHeight!=document.MM_pgH) location.reload();
 109 }
 110 MM_reloadPage(true);
 111 //-->
 112   </script>
 113 </head>
 114 <body onload="preloadImages();"
 115  style="background-color: rgb(255, 255, 255);">
 116 <!-- The table is not formatted nicely because some browsers cannot join images in table cells if there are any hard carriage returns in a TD. -->
 117 <div id="Layer1"
 118  style="position: absolute; left: 335px; top: 42px; width: 388px; height: 43px; z-index: 1; font-size: x-small;">
 119 <div class="style1" align="right">Welcome</div>
 120 </div>
 121 <div id="Layer2"
 122  style="position: absolute; left: 226px; top: 188px; width: 497px; height: 431px; z-index: 2;">
 123 <div align="justify">
 124 <h3 class="heading1">Latest News</h3>
 125 <p>The new  version 2.2 is now available for download.</p>
 126 <span class="heading1">Perl-speaks-NONMEM</span>
 127 <p>Perl-speaks-NONMEM (PsN) is a collection of Perl modules and programs aiding in the development
 128  of non-linear mixed effect models using NONMEM. The functionality ranges from solutions to simpler
 129  tasks such as parameter estimate extraction from output files, data file sub setting  and resampling,
 130  to advanced computer-intensive statistical methods. PsN includes stand-alone tools for the end-user
 131  as well as development libraries for method developers.
 132 </p>
 133 <p>
 134   Compared to previous versions of PsN 2, the ongoing work on PsN version 2.2 has brought some changes
 135   to the overall structure. PsN is now logically divided into three parts. Note, however, that you still
 136   only download and install one package.
 137 </p>
 138 <p>
 139 Most of what was included in the 2.0 release of PsN is now included in <b>PsN-Core</b>. PsN-Core is built around NONMEM's model, data and output
 140 files.  Through PsN-Core
 141 all parts of these files can be controlled in user-written Perl code. </p>
 142 <p>
 143 Using the functionality of PsN-Core we have implemented two new components: <strong>PsN-Toolkit</strong> and <strong>PsN-Utilities</strong>.</p>
 144 <p><strong>PsN-Toolkit</strong> is a collection
 145   of computer intensive statistical methods for non-linear mixed effect modeling using NONMEM.  The toolkit includes Perl modules for Bootstrapping, Jackknifing, Log-likelihood Profiling, Case-deletion Diagnostics and Stepwise Covariate Model building. Using  a module from PsN-Toolkit requires some basic
 146   knowledge of Perl and some understanding of the toolkit framework. </p>
 147 <p><b>PsN-Utilities</b> is a set of command line programs
 148 that allows the user to use the functionality of PsN-Core and PsN-Toolkit without the need to write Perl code. Apart from programs for all the tools in PsN-Toolkit, PsN-Utilities includes utilities that perform simpler tasks, such as summarizing the output from NONMEM
 149 runs.
 150 </p>
 151 <p>You can read more about the different parts under <a href="docs.php">Documentation</a>.</p>
 152 <p>
 153 Perl-speaks-NONMEM is copyright &copy; 2000-2006 by <a href="mailto:lars.lindbom@farmbio.uu.se">Lars Lindbom</a>
 154 and <a href="mailto:niclas.jonsson@farmbio.uu.se">Niclas
 155 Jonsson.</a> All rights reserved.
 156 </p>
 157 <p>
 158 PsN is maintained by <a href="mailto:pontus.pihlgren@farmbio.uu.se">Pontus
 159 Pihlgren</a> and <a href="mailto:lars.lindbom@farmbio.uu.se">Lars
 160 Lindbom</a>.
 161 </p>
 162 <p>The site is designed and implemented
 163 by <a href="mailto:justin.wilkins@farmbio.uu.se">Justin
 164 Wilkins</a>.
 165 </p>
 166 <p>
 167 Perl-speaks-NONMEM is licensed under version 2 of the GNU General
 168 Public License as published by the Free Software Foundation.
 169 </p>
 170 <h3 class="heading1">References</h3>
 171 <ul>
 172     <li class="style2"> <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=16023764&query_hl=1&itool=pubmed_docsum">Lindbom L, Pihlgren P, Jonsson EN.</a> <br>
 173                 PsN-Toolkit--a collection of computer intensive statistical methods for non-linear mixed effect modeling using NONMEM. <br>
 174                 Comput Methods Programs Biomed. 2005 Sep;79(3):241-57. </li>
 175     <li class="style2"> <a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&dopt=AbstractPlus&list_uids=15212851&query_hl=1&itool=pubmed_docsum">Lindbom L, Ribbing J, Jonsson EN. </a> <br>
 176                 Perl-speaks-NONMEM (PsN)--a Perl module for NONMEM related programming.<br>
 177         Comput Methods Programs Biomed. 2004 Aug;75(2):85-94.</li>
 178 </ul>
 179   <h3 class="heading1">Acknowledgments</h3>
 180 <p>
 181 NONMEM&reg; is a registered trademark of GloboMax. The Perl camel
 182 logo is
 183 a registered trademark of O'Reilly Media, Inc. and is used with
 184 permission. All logos and trademarks in this site are property of
 185 their respective owners.
 186 </p>
 187 <table width="100%"  border="0" cellspacing="0" cellpadding="0">
 188   <tr>
 189     <td width="20%"><a href="http://www.sourceforge.net/" target="_blank"><img src="gfx/sflogo.php.png" alt="SourceForge" width="88" height="31" vspace="10" border="0"></a></td>
 190     <td width="80%">PsN is hosted at SourceForge. </td>
 191   </tr>
 192 </table>
 193 <p>&nbsp;</p>
 194 <p align="justify">&nbsp;</p>
 195 </div>
 196 </div>
 197 <table border="0" cellpadding="0" cellspacing="0" width="780">
 198   <tbody>
 199     <tr>
 200       <td height="600" width="780">
 201       <table border="0" cellpadding="0" cellspacing="0" width="780">
 202         <tbody>
 203           <tr>
 204             <td colspan="7" height="201" width="780"><img
 205  src="images/indexpane1_1_.jpg" name="" alt="" border="0" height="201"
 206  width="780"></td>
 207           </tr>
 208           <tr>
 209             <td height="46" width="26"><img
 210  src="images/indexpane1_2_.jpg" name="" alt="" border="0" height="46"
 211  width="26"></td>
 212             <td height="46" width="73"><a href="index.php"
 213  onmouseover="changeImages(/*CMP*/ 'object', /*URL*/ 'images/indexhomeov.jpg'); return true;"
 214  onmouseout="changeImages(/*CMP*/ 'object', /*URL*/ 'images/indexhome.jpg'); return true;"><img
 215  src="images/indexhome.jpg" name="object" alt="Home" border="0"
 216  height="46" width="73"></a></td>
 217             <td height="46" width="11"><img
 218  src="images/indexpane3_2_.jpg" name="" alt="" border="0" height="46"
 219  width="11"></td>
 220             <td height="46" width="25"><img
 221  src="images/indexpane4_2_.jpg" name="" alt="" border="0" height="46"
 222  width="25"></td>
 223             <td height="46" width="15"><img
 224  src="images/indexpane5_2_.jpg" name="" alt="" border="0" height="46"
 225  width="15"></td>
 226             <td height="46" width="40"><img
 227  src="images/indexpane6_2_.jpg" name="" alt="" border="0" height="46"
 228  width="40"></td>
 229             <td height="46" width="590"><img
 230  src="images/indexpane7_2_.jpg" name="" alt="" border="0" height="46"
 231  width="590"></td>
 232           </tr>
 233           <tr>
 234             <td colspan="7" height="7" width="780"><img
 235  src="images/indexpane1_3_.jpg" name="" alt="" border="0" height="7"
 236  width="780"></td>
 237           </tr>
 238           <tr>
 239             <td height="46" width="26"><img
 240  src="images/indexpane1_4_.jpg" name="" alt="" border="0" height="46"
 241  width="26"></td>
 242             <td colspan="5" height="46" width="164"><a href="docs.php"
 243  onmouseover="changeImages(/*CMP*/ 'object1', /*URL*/ 'images/indexdocumentationov.jpg'); return true;"
 244  onmouseout="changeImages(/*CMP*/ 'object1', /*URL*/ 'images/indexdocumentation.jpg'); return true;"><img
 245  src="images/indexdocumentation.jpg" name="object1" alt="Documentation"
 246  border="0" height="46" width="164"></a></td>
 247             <td height="46" width="590"><img
 248  src="images/indexpane7_4_.jpg" name="" alt="" border="0" height="46"
 249  width="590"></td>
 250           </tr>
 251           <tr>
 252             <td colspan="7" height="7" width="780"><img
 253  src="images/indexpane1_5_.jpg" name="" alt="" border="0" height="7"
 254  width="780"></td>
 255           </tr>
 256           <tr>
 257             <td height="46" width="26"><img
 258  src="images/indexpane1_6_.jpg" name="" alt="" border="0" height="46"
 259  width="26"></td>
 260             <td colspan="3" height="46" width="109"><a
 261  href="download.php"
 262  onmouseover="changeImages(/*CMP*/ 'object2', /*URL*/ 'images/indexdownloadov.jpg'); return true;"
 263  onmouseout="changeImages(/*CMP*/ 'object2', /*URL*/ 'images/indexdownload.jpg'); return true;"><img
 264  src="images/indexdownload.jpg" name="object2" alt="Download" border="0"
 265  height="46" width="109"></a></td>
 266             <td colspan="3" height="46" width="645"><img
 267  src="images/indexpane5_6_.jpg" name="" alt="" border="0" height="46"
 268  width="645"></td>
 269           </tr>
 270           <tr>
 271             <td colspan="7" height="7" width="780"><img
 272  src="images/indexpane1_7_.jpg" name="" alt="" border="0" height="7"
 273  width="780"></td>
 274           </tr>
 275           <tr>
 276             <td height="46" width="26"><img
 277  src="images/indexpane1_8_.jpg" name="" alt="" border="0" height="46"
 278  width="26"></td>
 279             <td colspan="2" height="46" width="84"><a href="buglist.php"
 280  onmouseover="changeImages(/*CMP*/ 'object3', /*URL*/ 'images/indexbuglistov.jpg'); return true;"
 281  onmouseout="changeImages(/*CMP*/ 'object3', /*URL*/ 'images/indexbuglist.jpg'); return true;"><img
 282  src="images/indexbuglist.jpg" name="object3" alt="Buglist" border="0"
 283  height="46" width="84"></a></td>
 284             <td colspan="4" height="46" width="670"><img
 285  src="images/indexpane4_8_.jpg" name="" alt="" border="0" height="46"
 286  width="670"></td>
 287           </tr>
 288           <tr>
 289             <td colspan="7" height="7" width="780"><img
 290  src="images/indexpane1_9_.jpg" name="" alt="" border="0" height="7"
 291  width="780"></td>
 292           </tr>
 293           <tr>
 294             <td height="46" width="26"><img
 295  src="images/indexpane1_10_.jpg" name="" alt="" border="0" height="46"
 296  width="26"></td>
 297             <td colspan="4" height="46" width="124"><a href="list.php"
 298  onmouseover="changeImages(/*CMP*/ 'object4', /*URL*/ 'images/indexmailing_listov.jpg'); return true;"
 299  onmouseout="changeImages(/*CMP*/ 'object4', /*URL*/ 'images/indexmailing_list.jpg'); return true;"><img
 300  src="images/indexmailing_list.jpg" name="object4" alt="Mailing List"
 301  border="0" height="46" width="124"></a></td>
 302             <td colspan="2" height="46" width="630"><img
 303  src="images/indexpane6_10_.jpg" name="" alt="" border="0" height="46"
 304  width="630"></td>
 305           </tr>
 306           <tr>
 307             <td colspan="7" height="141" width="780"><img
 308  src="images/indexpane1_11_.jpg" name="" alt="" border="0" height="141"
 309  width="780"></td>
 310           </tr>
 311         </tbody>
 312       </table>
 313       </td>
 314     </tr>
 315     <tr>
 316       <td><img src="images/is_single_pixel_gif.gif" alt="" height="1"
 317  width="780"></td>
 318     </tr>
 319   </tbody>
 320 </table>
 321 <!--Adobe(R) LiveMotion(TM) DataMap1.0 DO NOT EDIT
 322 end DataMap -->
 323 </body>
 324 </html>