test/em_fire/fireflux_med/72x1.pbs

   1 #!/bin/bash
   2 # copy this script to your run directory and modify as desired
   3 # do NOT commit a copy!
   4
   5 # Set the number of nodes and processes per node
   6 # each node contains 12 processing cores
   7 #PBS -l nodes=6:ppn=12
   8
   9 # Set the maximum amount of the time the job will run (HH:MM:SS)
  10 #PBS -l walltime=30:00:00
  11
  12 # Give the job a name
  13 #PBS -N ffmed_72x1
  14
  15 # Keep all environment variables from the current session (PATH, LD_LIBRARY_PATH, etc)
  16 #PBS -V
  17
  18 # Merge stderr and stdout
  19 #PBS -j oe
  20
  21 # Set log file
  22 #PBS -o 72x1.log
  23
  24 # Change to the run directory (where job was submitted)
  25 cd $PBS_O_WORKDIR
  26
  27 WD=72x1.dir
  28 rm -rf $WD
  29 mkdir $WD
  30 cd $WD
  31 pwd
  32 ln -s ../ideal.exe .
  33 ln -s ../input_fc .
  34 ln -s ../input_ht .
  35 ln -s ../input_lu .
  36 ln -s ../input_sounding .
  37 ln -s ../LANDUSE.TBL .
  38 ln -s ../namelist.fire .
  39 ln -s ../namelist.input .
  40 ln -s ../wrf.exe .
  41
  42 cat $PBS_NODEFILE  > nodes
  43 mpirun_rsh -np 1 -hostfile nodes OMP_NUM_THREADS=1 ./ideal.exe
  44 mpirun_rsh -np 72 -hostfile nodes OMP_NUM_THREADS=1 ./wrf.exe
  45