test/em_fire/hill_med/2x6.pbs

   1 #!/bin/bash
   2 # copy this script to your run directory and modify as desired
   3
   4 # Set the number of nodes and processes per node
   5 # each node contains 12 processing cores
   6 #PBS -l nodes=1:ppn=12
   7
   8 # Set the maximum amount of the time the job will run (HH:MM:SS)
   9 #PBS -l walltime=03:00:00
  10
  11 # Give the job a name
  12 #PBS -N hill_m_2x6
  13
  14 # Keep all environment variables from the current session (PATH, LD_LIBRARY_PATH, etc)
  15 #PBS -V
  16
  17 # Merge stderr and stdout
  18 #PBS -j oe
  19
  20 # Set log file
  21 #PBS -o 2x6.log
  22
  23 # Change to the run directory (where job was submitted)
  24 cd $PBS_O_WORKDIR
  25
  26 WD=2x6.dir
  27 rm -rf $WD
  28 mkdir $WD
  29 cd $WD
  30 pwd
  31 ln -s ../ideal.exe .
  32 #ln -s ../input_fc .
  33 #ln -s ../input_ht .
  34 #ln -s ../input_lu .
  35 ln -s ../input_sounding .
  36 #ln -s ../LANDUSE.TBL .
  37 ln -s ../namelist.fire .
  38 ln -s ../namelist.input .
  39 ln -s ../wrf.exe .
  40
  41 cat $PBS_NODEFILE  > nodes
  42 mpirun_rsh -np 1 -hostfile nodes OMP_NUM_THREADS=1 ./ideal.exe
  43 mpirun_rsh -np 2 -hostfile nodes OMP_NUM_THREADS=6 ./wrf.exe
  44