tcoffee/PKGBUILD

   1 # Maintainer: Michael Schubert <mschu.dev at gmail>
   2 # Contributor: Mick Elliot <micke at sfu dot ca>
   3 # Contributor: Damir Perisa <damir.perisa@bluewin.ch>
   4
   5 pkgname=tcoffee
   6 pkgver=9.01
   7 pkgrel=1
   8 arch=('i686' 'x86_64')
   9 license=('GPL2')
  10 pkgdesc="An alignment tool for Protein, DNA and RNA sequences"
  11 url="http://www.tcoffee.org/Projects_home_page/t_coffee_home_page.html"
  12 depends=('gcc-libs' 'gcc-fortran')
  13 source=("http://www.tcoffee.org/Packages/Stable/Latest/T-COFFEE_distribution_Version_$pkgver.tar.gz")
  14 md5sums=('69d960b1ab6ee04819f0f0f4cc372897')
  15
  16 build() {
  17   cd "$srcdir/T-COFFEE_distribution_Version_$pkgver/t_coffee_source"
  18   make -i CC=gcc FCC=gfortran all
  19 }
  20
  21 package() {
  22   cd "$srcdir/T-COFFEE_distribution_Version_$pkgver/t_coffee_source"
  23   install -Dm755 t_coffee "$pkgdir/usr/bin/t_coffee"
  24   install -Dm755 TMalign "$pkgdir/usr/bin/TMalign"
  25 }