1 <?xml version=
"1.0" encoding=
"UTF-8"?>
2 <!DOCTYPE chaos PUBLIC
"-//Chaos//Custom XML//EN" "http://www.fruitfly.org/chaos-xml/dtd/chaos.dtd">
5 <chaos_version>1</chaos_version>
6 <chaos_flavour>chaos
</chaos_flavour>
7 <focus_feature_id>gene:EMBL/GenBank/SwissProt:AE003734:
52204:
55287</focus_feature_id>
8 <feature_unique_key>feature_id
</feature_unique_key>
9 <equiv_chado_release>chado_1_01
</equiv_chado_release>
10 <export_unixtime>1114399206</export_unixtime>
11 <export_localtime>Sun Apr
24 20:
20:
06 2005</export_localtime>
12 <export_host></export_host>
13 <export_user>cjm
</export_user>
14 <export_perl5lib>:/Users/cjm/cvs/DBIx-DBStag:/Users/cjm/stag:/Users/cjm/cvs/sqlfairy/lib:/Users/cjm/chaos-xml/lib::/Users/cjm/cabal::/Users/cjm/biostag/lib::/Users/cjm/amigo/perl::/Users/cjm/go-db-perl::/Users/cjm/go-perl::/Users/cjm/cvs/bioperl-live::/users/cjm/cvs/gmod/XML-XORT/lib:/sw/lib/perl5:/sw/lib/perl5/darwin
</export_perl5lib>
15 <export_program>/Users/cjm/chaos-xml/bin/cx-genbank2chaos.pl
</export_program>
18 <feature_id>AE003734.2
</feature_id>
19 <dbxrefstr>SEQDB:AE003734.2
</dbxrefstr>
21 <uniquename>Drosophila_melanogaster:AE003734.2
</uniquename>
22 <type>databank_entry
</type>
25 <value>On Sep
18,
2002 this sequence version replaced gi:
7300718.
</value>
27 <organismstr>Drosophila melanogaster (fruit fly)
</organismstr>
30 <feature_id>contig:AE003734.2:
55787:
51703</feature_id>
31 <name>contig-Rab1-
500-
500</name>
32 <uniquename>contig-Drosophila_melanogaster:Rab1-
500-
500</uniquename>
38 <srcfeature_id>AE003734.2
</srcfeature_id>
40 <residues>AACCTGTGCTATCTGGAGGCCATTCACAACTTCGTGGAGGTGCTCAACGAATACTTCCATAATGTGTGCGAGCTGGATCTGGTCTTCAACTTCTACAAGGTGTACAGTGTGGTGGACGAGATGTTCCTGGCGGGCGAGATCCGGGAGACCTCGCAGACGAAGGTGCTCAAGCAGCTGCTCACGCTAAATTCGCTGGAGTAGCGGCCCAATTCATACATATGTATATCGGATCTGCCAGATGCATTCCCCCAGGCGCTACACCCGCCTATCGAATCTTCTTTCATATACTATTACGCGTATTATTATTATTATCTTTAATGTGTTCTCTATGCAAACACTCAAATGTTAAAGGCCGTGTTTAGAAACAAATGATGTACCATAAGAGATTGTATGCAAAAGTTAAGTATTTTTGTTTTTATATGGGGTGTGTTAGGGGTCATTTGGCGATAATCCATATATTTTCTTCTCTGGTTCCGCCCACTCACCTCCGTAGACAAGATAATGTGTAGCCCTGGTTGGAAGAGGGCCCCGCGCATTTTCCAACACTGCCGCTAATGCCACTTCGTCATTTTTTCAGTCGCCATTGTTCTCGTTCTCGGCCGTCGAATTTGTGGAAATAAACGTATTTCCCATTTAAATTCGCTGCAATAATTACAATAGCGAACTGCAAAACACAACACAAGCCGAGTGCGTGTCGATTTCCAGTATTTCGGAACGCGCAAATCAAATAAAAACACTCTGAACAGCAGCCAGTCCAGGGCCAGAAATCGAATATTTGTTCGTGGCAAATATATAATCTTGTGAAAAAGCCAGAAAATGTCATCTGTGAATCCGGAATAGTAAGTCGTCACACGTAATTATGCGCAGTTATCTGGAGTTAAAACAGTGACTGGGCTTCCACTTCCTTTTCTGGCCTTCGAAAATAGTTTCTTTTATTTTTTCTGCGACGTCATTTCTGCTACGTTTCATTCCCATTCATTATCGAGCAGCCCCACTCCACTCCCTTTTGCCCTCGTTGGCAACTCCAAAAAAACAGACCATTTGCTAAAAACAAAATACACACTCGGACCTAACAACCGACCCAATCGAGAAACCATAACCAAAACTGTGTGTTTCAGCTGGATTTCAATGTAGTGCCCACGGGCGAGGCGATGAAAAGCGCGTTCGAAACTCTCATCGGAATCTGCATATGTATAAAGTCCACACATATATACAGCGAGATCCCAGTTGACGGGCCAAATCGCTAGTCGGGCGGATGAGTCACCTGCGTGGAGAGCCTTTCCCACCCCCAGCGCAGTGCTACGTAATCAAAGGCCATTCCAGTGCTACTTAATTGCCGCTCTCACTCAAGGCAATTAAATCTGAACCGATCTTGGTTCGCACTCTCCAGAAAGCCTCCTTCAATAGCCAGCATACATGTGTGCAGAGGATTGGAACACTATCGCATATCATTCAGCAATTGGGGGTTGATGTTGGACATAGCATGATAAGATAAAGCCTAAACCAAACCGGTTTTATGTATATATTAGTATCTGCCCGACTAAACTATGCCCGCAAAACACCTCTCTAAATGTTTTGCTTGAATCAATGATTTCTAACTGATTGTCATCCAACTTATTTCCCTTTAAATGTATACTAAACCTTTTACACTCTGATTTTAAACATTTCGTCTTGTAATATCACTATCGCAAATATGCATCATCAGTTTTATTTAGATTTCTCTGAAGTTTTATATGTTTCAGCATAGGGTCTGAACTATTCCCACATCGCAGCACAAATTTATATCATTAACTATTAAATTAACTATAATTTATTAACTATATAACTATTTTATAACATTAACTATATTAACTATCTCCAAATCCACAGCGATTATCTCTTTAAGTTGCTGCTTATTGGAGACTCGGGCGTTGGAAAGTCCTGTCTTCTGTTGCGATTTGCCGATGACACATATACAGAAAGTTATATCAGCACAATCGGAGTGGATTTCGTAAGCCAACCGGAAATTTGTGAAAATTCTTTATGTCTGACTCATAAACCTTTATCTTGCAGAAAATCAGGACTATAGAACTCGACGGAAAGACCATTAAACTGCAAATCGTAAGCATAAAAACGCCAGAGGCAATCTAGTCCAGAGCTAATTAGTCTGTTTACAGTGGGATACTGCTGGCCAGGAGCGCTTCCGCACCATCACGTCTTCATATTATAGGGGCGCCCATGGCATCATTGTCGTATACGATTGCACGGACCAGGAGTCTTTCAACAATGTGAAGCAGTGGCTGGAGGAGATCGAGCGGTATGCCTGTGAGAATGTCAACAAGTTGCTGGTTGGCAACAAGAGCGACTTGACCACCAAGAAAGTAGTCGACCACACCACAGCTGCGGTGCGTATATTGCTGGTTTAGTCCTGGGAATCATAGATGCACGTATATACTAATCTGGGTCTTTGTTTCCAAAATTCCAGGAGTACGCCGCCCAGTTAGGCATTCCATTCCTTGAAACTTCGGCCAAGAGCGCCACCAACGTTGAGCAGGCCTTCATGACGATGGCGGCGGAGATCAAGAATCGCGTCGGGCCGCCGTCCAGCGCCACTGACAACGCTAGCAAAGTGAAAATCGATCAAGGACGTCCAGTGGAAAACACCAAATCCGGTTGCTGCTGAATAACTCTGATTGTGAATCATTATTTTATTATACAATTAAACAAAATTTAAATATAATAAATTAAAACGGAAACCACACAATAATAATAAAACAAGCGAAACCGATGGCGGATCCACGAAATCGTAATTATAATAACTAATTCTGTAATAACAATAATGGTGAGGAATGACGAGTAGTGCGTTTGTATGATCCTAACCGTGATCCAATTCGATAAACAATTTAAGCAAATATGTATTAGGTACGTAGCCAACCAGCTCCAGATCCAGATCCCGATCCAGACTTCAGACATCCCCAACTAAACTCGAGCAACAAGGACATCGATCCTAATACTAACCGTCACTCTGATTTCCGCAGTTCTGTTCATAAGTAGTGCAAAGCAAGCAAATTCGGTGTAGCAATTAACCTAATATTACTTTAACCTACAATAAGAAGTTACCTATCACAGCAGCGCGAAACCATACCGAAACTAATATGTACTATTAACTACACATTAATTGAGCGCAGGCGACGGCAGGAGCAATTGTACTTGTCCTGTGTCAGCTACTACTTACCACTATGTATACATATGTATGTGTTTAAATTACAAATACAATTTTCTAAACATATTATCTCTAGCGAACGTGATCGTCACTTGAAATTTTATGTAAATCGAACCCAAAACCGAACGAACATTTTTAGATTTAACGTCGAGCGATTGTGTGTTTGAATTATCGTGTGACACAAGGGATTTGTTTAGGCACATAATTAGTGTAATAATGACGACATAGCGATGAAGTTTAATAAAAATTATTGCGTGTGCGTATTTAAATTGCAAGGTTTGGGATCAAGGACACACTTTAGTTTCGGTTTTTACTGTCGCCCGAATTTGAATCTTAATTTGACCTGAGTCTAATAAAATCGATCTGTACCGATGCCTACAAACGACTTGTTTTATTTCTTGACTTTGGAAAGATTGCAAAACTTAAGTGAAGGCCGGAACTGATCCGCACGCACCCAAATACTTGGCAGAAACTTTAAGGGCGAGGCGATTTGTGTAGAATCTTCCTGTTTTTGGAGCAAGTTTTTGGCTGATTTAAAACTTGGATCATGCCAATGTATTTAGAATATATTCAAAGCACTCTATACGAGTGCTTAGATGTTGAAGAATCAGATGTATAAATATATTTCTATTTAAAAATGTTTTATATCTGCATTATTTCACAAATCAGATTAGTTAGTGCACTGCCGTTAAGTTAACTGCACATAGGTAATCAATTTTTGTAAACCTGATACGTTGGCAAATCTTCTAGGATACTTACGAAAAATGTATGTATCCACTTATTTTATAAATTATATACATATATTCGGAAAGATATTTTTCTTTTTAGGACATACTCTACCTTTATGTATTGCATTGTATACATACAGGACTTATTATTTTT
</residues>
43 <feature_id>gene:EMBL/GenBank/SwissProt:AE003734:
52204:
55287</feature_id>
45 <uniquename>Drosophila_melanogaster:Rab1
</uniquename>
47 <organismstr>Drosophila melanogaster (fruit fly)
</organismstr>
49 <srcfeature_id>contig:AE003734.2:
55787:
51703</srcfeature_id>
56 <dbxrefstr>FLYBASE:FBgn0016700
</dbxrefstr>
60 <value>93D2-
93D2
</value>
65 <value>last curated on Mon Apr
01 10:
37:
17 PST
2002</value>
70 <value>FLYBASE:FBgn0016700
</value>
79 <type>locus_tag
</type>
85 <feature_id>mRNA:EMBL/GenBank/SwissProt:AE003734:
52204:
55287</feature_id>
86 <name>Rab1-mRNA-
2</name>
87 <uniquename>Drosophila_melanogaster:Rab1-mRNA-
2</uniquename>
89 <organismstr>Drosophila melanogaster (fruit fly)
</organismstr>
91 <srcfeature_id>contig:AE003734.2:
55787:
51703</srcfeature_id>
98 <dbxrefstr>FLYBASE:FBgn0016700
</dbxrefstr>
102 <value>CG3320-RB
</value>
107 <value>FLYBASE:FBgn0016700
</value>
116 <type>locus_tag
</type>
117 <value>CG3320
</value>
121 <feature_relationship>
122 <subject_id>mRNA:EMBL/GenBank/SwissProt:AE003734:
52204:
55287</subject_id>
123 <object_id>gene:EMBL/GenBank/SwissProt:AE003734:
52204:
55287</object_id>
125 </feature_relationship>
126 <feature_relationship>
127 <subject_id>mRNA:EMBL/GenBank/SwissProt:AE003734:
52204:
55287</subject_id>
128 <object_id>gene:EMBL/GenBank/SwissProt:AE003734:
52204:
55287</object_id>
130 </feature_relationship>
132 <feature_id>AAF55873.1
</feature_id>
133 <name>Rab1-CDS-
1</name>
134 <uniquename>Drosophila_melanogaster:Rab1-CDS-
1</uniquename>
135 <type>polypeptide
</type>
136 <residues>MSSVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDNASKVKIDQGRPVENTKSGCC
</residues>
138 <organismstr>Drosophila melanogaster (fruit fly)
</organismstr>
140 <srcfeature_id>contig:AE003734.2:
55787:
51703</srcfeature_id>
147 <dbxrefstr>GI:
7300727</dbxrefstr>
150 <dbxrefstr>FLYBASE:FBgn0016700
</dbxrefstr>
153 <dbxrefstr>protein:AAF55873.1
</dbxrefstr>
157 <value>CG3320-PA
</value>
162 <value>Rab1 gene product from transcript CG3320-RA
</value>
167 <value>GI:
7300727</value>
172 <value>FLYBASE:FBgn0016700
</value>
176 <type>protein_id
</type>
177 <value>AAF55873.1
</value>
186 <type>translation
</type>
187 <value>MSSVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDNASKVKIDQGRPVENTKSGCC
</value>
191 <type>locus_tag
</type>
192 <value>CG3320
</value>
196 <type>codon_start
</type>
201 <feature_relationship>
202 <subject_id>AAF55873.1
</subject_id>
203 <object_id>mRNA:EMBL/GenBank/SwissProt:AE003734:
52204:
55287</object_id>
204 <type>derives_from
</type>
205 </feature_relationship>
207 <feature_id>AAN13857.1
</feature_id>
208 <name>Rab1-CDS-
2</name>
209 <uniquename>Drosophila_melanogaster:Rab1-CDS-
2</uniquename>
210 <type>polypeptide
</type>
211 <residues>MSSVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHTTAAVRILLV
</residues>
213 <organismstr>Drosophila melanogaster (fruit fly)
</organismstr>
215 <srcfeature_id>contig:AE003734.2:
55787:
51703</srcfeature_id>
222 <dbxrefstr>GI:
23171868</dbxrefstr>
225 <dbxrefstr>FLYBASE:FBgn0016700
</dbxrefstr>
228 <dbxrefstr>protein:AAN13857.1
</dbxrefstr>
232 <value>CG3320-PB
</value>
237 <value>Rab1 gene product from transcript CG3320-RB
</value>
242 <value>GI:
23171868</value>
247 <value>FLYBASE:FBgn0016700
</value>
251 <type>protein_id
</type>
252 <value>AAN13857.1
</value>
261 <type>translation
</type>
262 <value>MSSVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHTTAAVRILLV
</value>
266 <type>locus_tag
</type>
267 <value>CG3320
</value>
271 <type>codon_start
</type>
276 <feature_relationship>
277 <subject_id>AAN13857.1
</subject_id>
278 <object_id>mRNA:EMBL/GenBank/SwissProt:AE003734:
52204:
55287</object_id>
279 <type>derives_from
</type>
280 </feature_relationship>
282 <feature_id>exon:EMBL/GenBank/SwissProt:AE003734:
52204:
53323</feature_id>
283 <name>Rab1-exon-
1</name>
284 <uniquename>Drosophila_melanogaster:Rab1-exon-
1</uniquename>
286 <organismstr>Drosophila melanogaster (fruit fly)
</organismstr>
288 <srcfeature_id>contig:AE003734.2:
55787:
51703</srcfeature_id>
300 <type>locus_tag
</type>
301 <value>CG3320
</value>
305 <feature_relationship>
306 <subject_id>exon:EMBL/GenBank/SwissProt:AE003734:
52204:
53323</subject_id>
307 <object_id>mRNA:EMBL/GenBank/SwissProt:AE003734:
52204:
55287</object_id>
309 </feature_relationship>
311 <feature_id>exon:EMBL/GenBank/SwissProt:AE003734:
52204:
53631</feature_id>
312 <name>Rab1-exon-
6</name>
313 <uniquename>Drosophila_melanogaster:Rab1-exon-
6</uniquename>
315 <organismstr>Drosophila melanogaster (fruit fly)
</organismstr>
317 <srcfeature_id>contig:AE003734.2:
55787:
51703</srcfeature_id>
329 <type>locus_tag
</type>
330 <value>CG3320
</value>
334 <feature_relationship>
335 <subject_id>exon:EMBL/GenBank/SwissProt:AE003734:
52204:
53631</subject_id>
336 <object_id>mRNA:EMBL/GenBank/SwissProt:AE003734:
52204:
55287</object_id>
338 </feature_relationship>
340 <feature_id>exon:EMBL/GenBank/SwissProt:AE003734:
53404:
53631</feature_id>
341 <name>Rab1-exon-
2</name>
342 <uniquename>Drosophila_melanogaster:Rab1-exon-
2</uniquename>
344 <organismstr>Drosophila melanogaster (fruit fly)
</organismstr>
346 <srcfeature_id>contig:AE003734.2:
55787:
51703</srcfeature_id>
358 <type>locus_tag
</type>
359 <value>CG3320
</value>
363 <feature_relationship>
364 <subject_id>exon:EMBL/GenBank/SwissProt:AE003734:
53404:
53631</subject_id>
365 <object_id>mRNA:EMBL/GenBank/SwissProt:AE003734:
52204:
55287</object_id>
367 </feature_relationship>
369 <feature_id>exon:EMBL/GenBank/SwissProt:AE003734:
53688:
53735</feature_id>
370 <name>Rab1-exon-
3</name>
371 <uniquename>Drosophila_melanogaster:Rab1-exon-
3</uniquename>
373 <organismstr>Drosophila melanogaster (fruit fly)
</organismstr>
375 <srcfeature_id>contig:AE003734.2:
55787:
51703</srcfeature_id>
383 <value>exon:EMBL/GenBank/SwissProt:AE003734:
53688:
53735</value>
392 <type>locus_tag
</type>
393 <value>CG3320
</value>
397 <feature_relationship>
398 <subject_id>exon:EMBL/GenBank/SwissProt:AE003734:
53688:
53735</subject_id>
399 <object_id>mRNA:EMBL/GenBank/SwissProt:AE003734:
52204:
55287</object_id>
401 </feature_relationship>
402 <feature_relationship>
403 <subject_id>exon:EMBL/GenBank/SwissProt:AE003734:
53688:
53735</subject_id>
404 <object_id>mRNA:EMBL/GenBank/SwissProt:AE003734:
52204:
55287</object_id>
406 </feature_relationship>
408 <feature_id>exon:EMBL/GenBank/SwissProt:AE003734:
53798:
53918</feature_id>
409 <name>Rab1-exon-
4</name>
410 <uniquename>Drosophila_melanogaster:Rab1-exon-
4</uniquename>
412 <organismstr>Drosophila melanogaster (fruit fly)
</organismstr>
414 <srcfeature_id>contig:AE003734.2:
55787:
51703</srcfeature_id>
422 <value>exon:EMBL/GenBank/SwissProt:AE003734:
53798:
53918</value>
431 <type>locus_tag
</type>
432 <value>CG3320
</value>
436 <feature_relationship>
437 <subject_id>exon:EMBL/GenBank/SwissProt:AE003734:
53798:
53918</subject_id>
438 <object_id>mRNA:EMBL/GenBank/SwissProt:AE003734:
52204:
55287</object_id>
440 </feature_relationship>
441 <feature_relationship>
442 <subject_id>exon:EMBL/GenBank/SwissProt:AE003734:
53798:
53918</subject_id>
443 <object_id>mRNA:EMBL/GenBank/SwissProt:AE003734:
52204:
55287</object_id>
445 </feature_relationship>
447 <feature_id>exon:EMBL/GenBank/SwissProt:AE003734:
54949:
55287</feature_id>
448 <name>Rab1-exon-
5</name>
449 <uniquename>Drosophila_melanogaster:Rab1-exon-
5</uniquename>
451 <organismstr>Drosophila melanogaster (fruit fly)
</organismstr>
453 <srcfeature_id>contig:AE003734.2:
55787:
51703</srcfeature_id>
461 <value>exon:EMBL/GenBank/SwissProt:AE003734:
54949:
55287</value>
470 <type>locus_tag
</type>
471 <value>CG3320
</value>
475 <feature_relationship>
476 <subject_id>exon:EMBL/GenBank/SwissProt:AE003734:
54949:
55287</subject_id>
477 <object_id>mRNA:EMBL/GenBank/SwissProt:AE003734:
52204:
55287</object_id>
479 </feature_relationship>
480 <feature_relationship>
481 <subject_id>exon:EMBL/GenBank/SwissProt:AE003734:
54949:
55287</subject_id>
482 <object_id>mRNA:EMBL/GenBank/SwissProt:AE003734:
52204:
55287</object_id>
484 </feature_relationship>