t/data/NC_006511-short.gbk

   1 LOCUS       NC_006511            4585229 bp    DNA     circular BCT 03-DEC-2005
   2 DEFINITION  Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC
   3             9150, complete genome.
   4 ACCESSION   NC_006511
   5 VERSION     NC_006511.1  GI:56412276
   6 KEYWORDS    .
   7 SOURCE      Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC
   8             9150
   9   ORGANISM  Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC
  10             9150
  11             Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
  12             Enterobacteriaceae; Salmonella.
  13 REFERENCE   1  (bases 1 to 4585229)
  14   AUTHORS   McClelland,M., Sanderson,K.E., Clifton,S.W., Latreille,P.,
  15             Porwollik,S., Sabo,A., Meyer,R., Bieri,T., Ozersky,P., McLellan,M.,
  16             Harkins,C.R., Wang,C., Nguyen,C., Berghoff,A., Elliott,G.,
  17             Kohlberg,S., Strong,C., Du,F., Carter,J., Kremizki,C., Layman,D.,
  18             Leonard,S., Sun,H., Fulton,L., Nash,W., Miner,T., Minx,P.,
  19             Delehaunty,K., Fronick,C., Magrini,V., Nhan,M., Warren,W.,
  20             Florea,L., Spieth,J. and Wilson,R.K.
  21   TITLE     Comparison of genome degradation in Paratyphi A and Typhi,
  22             human-restricted serovars of Salmonella enterica that cause typhoid
  23   JOURNAL   Nat. Genet. 36 (12), 1268-1274 (2004)
  24    PUBMED   15531882
  25 REFERENCE   2  (bases 1 to 4585229)
  26   AUTHORS   .
  27   CONSRTM   NCBI Genome Project
  28   TITLE     Direct Submission
  29   JOURNAL   Submitted (08-DEC-2004) National Center for Biotechnology
  30             Information, NIH, Bethesda, MD 20894, USA
  31 REFERENCE   3  (bases 1 to 4585229)
  32   AUTHORS   McClelland,M., Sanderson,K.E., Clifton,S.W., Latreille,P.,
  33             Porwollik,S., Sabo,A., Meyer,R., Bieri,T., Ozersky,P., McLellan,M.,
  34             Harkins,R., Wang,C., Nguyen,C., Burghoff,A., Elliott,G.,
  35             Kohlberg,S., Strong,C., Ali,J., Dante,M., Du,F., Layman,D.,
  36             Leonard,S., Sun,H., Fulton,L., Nash,W., Miner,T., Delehaunty,K.,
  37             Fronick,C., Florea,L., Spieth,J., Nhan,M. and Wilson,R.K.
  38   TITLE     Direct Submission
  39   JOURNAL   Submitted (01-OCT-2004) Genome Sequencing Center, Washington
  40             University, 4444 Forest Park Ave., St. Louis, MO 63108, USA
  41 COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
  42             NCBI review. The reference sequence was derived from CP000026.
  43             COMPLETENESS: full length.
  44 FEATURES             Location/Qualifiers
  45      source          1..4585229
  46                      /organism="Salmonella enterica subsp. enterica serovar
  47                      Paratyphi A str. ATCC 9150"
  48                      /mol_type="genomic DNA"
  49                      /strain="ATCC 9150"
  50                      /db_xref="ATCC:9150"
  51                      /db_xref="taxon:295319"
  52      gene            190..255
  53                      /gene="thrL"
  54                      /locus_tag="SPA0001"
  55                      /db_xref="GeneID:3175747"
  56      CDS             190..255
  57                      /gene="thrL"
  58                      /locus_tag="SPA0001"
  59                      /note="similar to Salmonella typhi CT18 thr operon leader
  60                      peptide"
  61                      /codon_start=1
  62                      /transl_table=11
  63                      /product="thr operon leader peptide"
  64                      /protein_id="YP_149352.1"
  65                      /db_xref="GI:56412277"
  66                      /db_xref="GeneID:3175747"
  67                      /translation="MNRISTTTITTITITTGNGAG"
  68                      /transl_table=11
  69                      /product="putative major fimbrial subunit"
  70                      /protein_id="YP_153436.1"
  71                      /db_xref="GI:56416361"
  72                      /db_xref="GeneID:3177061"
  73                      /translation="MRRLYLALILLFAYSSHGYASCRRSGNEGAITITPPSQLVVDSH
  74                      AYTAGEVLWQSGWVSTSEVTMDGCSRDYKVGFLYEPGSAQSNTSATINANDGNNTPVF
  75                      STGISGVDIAIKTQTNAGPYDNVMPIDNTYHNGDGNKTHHAMAPAYNVELVALGGPIT
  76                      SDTATFQSPLARVSFRDSATEDSGGDILTHLYLGNTQLIMKAMGCRVETPAITVDLGS
  77                      VNLGSFANSQTAGTGEQDILLTCEQGTAISASLSAQPASGNNPDNSVIQLSNASAPTS
  78                      ATGVGVQLGIQAPDAGFFTDSLPINQKIDLFTHTITTNADGSQTVNGGTMNMSTTLKI
  79                      SARYYKTAATVTAGQANATATLNLTYN"
  80      gene            4584519..4585205
  81                      /gene="lasT"
  82                      /locus_tag="SPA4410"
  83                      /db_xref="GeneID:3177689"
  84      CDS             4584519..4585205
  85                      /gene="lasT"
  86                      /locus_tag="SPA4410"
  87                      /note="similar to Salmonella typhi CT18 putative RNA
  88                      methyltransferase"
  89                      /codon_start=1
  90                      /transl_table=11
  91                      /product="putative RNA methyltransferase"
  92                      /protein_id="YP_153444.1"
  93                      /db_xref="GI:56416369"
  94                      /db_xref="GeneID:3177689"
  95                      /translation="MRVTIVLVAPARAENIGAAARAMKTMGFTDLRIVDSQAHLEPAT
  96                      RWVAHGSGDIIDNIEVFHTLADALHDVDFTVATTARSRAKFHYYASPAELVPLLQEKS
  97                      RWMRHAALVFGREDSGLTNDELALADVLTGVPMAADYPSLNLGQAVMVYCYQLAGLMQ
  98                      QATESVDIADESQLQALRARLLRLLTTLEAADDHKLTDWLQQRIGLLGQRDTVMLHRL
  99                      VHDIEKKLTK"
 100 ORIGIN
 101         1 agagattacg tctggtttca agagatcata acagagggaa ttggttgaaa ataaatatat
 102        61 cgccagcagc acatgaacaa atttcggaat gtgatcaatt taaaaattta ttgacttagg
 103       121 cgggcagata ctttaaccaa tataggaata caagacagac aaataaaaat gacagagtac
 104       181 acaacatcca tgaaccgcat cagcaccacc accattacca ccatcaccat taccacaggt
 105       241 aacggtgcgg gctgacgcgt acaggaaaca cagaaaaaag cccgcacctg aacagtgcgg
 106       301 gctttttttt cgaccagaga tcacgaggta acaaccatgc gagtgttgaa gttcggcggt
 107       361 acatcagtgg caaatgcaga acgttttctg cgtgttgccg atattctgga aagcaatgcc
 108       421 aggcaagggc aggtagcgac cgtactttcc gcccccgcga aaattaccaa ccatctggtg
 109       481 gcgatgattg aaaaaactat cggcggtcag gatgctttgc cgaatatcag cgatgccgaa
 110       541 cgtatttttt ctgacctgct cgcaggactt gccagcgcgc agccgggatt cccgcttgca
 111       601 cggttgaaaa tggttgtcga acaagaattc gctcagatca aacatgtttt gcatggtatc
 112       661 agcctgctgg gtcagtgccc ggacagcatc aacgccgcgc tgatttgccg tggcgaaaaa
 113       721 atgtcgatcg cgattatggc gggacttctg gaggcgcgtg ggcatcgcgt cacggtgatc
 114       781 gatccggtag aaaaactgct ggcggtgggc cattaccttg agtctaccgt cgatatcgcg
 115 //