bp_process_wormbase: move program to new Bio-DB-Ace distribution
[bioperl-live.git] / t / data / map_hem / HEM1-HEM12.fa
blobe421765e523e8a5485cde2817a51d5eebb319c04
1 >SGD_Scer_YDR232W HEM1 "5-aminolevulinate synthase, catalyzes the first step in the heme biosynthetic pathway; an N-terminal signal sequence is required for localization to the mitochondrial matrix; expression is regulated by Hap2p-Hap3p"
2 ACTGAAAAAAAAACCTAAGTACTGTTATGATTATTGAGGGACAACAACTAGCTCTATTAG
3 TTTTCCTTCCAACCAAACTTATATGGGCAATATATAGGAAAGAAAAAAGAAAAGAGTGGG
4 ATAAAAAAAAAAGAAACGCGAGCTGAGAAGGGAAGGCGTGTAAAGGAAGAACGGTTGAGA
5 GACAGCAGAGCAGGGTGCAACACACAACCGAATAGAGTATCAGCTGACGGAATGGAGAAG
6 TTTGGTATGATGCAAACGTTGTATTTCTAACAACGCATGGATCAGAACAATGGGCAAGGC
7 AAGATGAAAAATTTCCGTTCCTGCTCTTTCTTCATATATGAACAATGACCAAAAAGCGCC
8 CGCGGCCGCAGACCAATGAGCGACGAAGGCGGCCTTTCCGAGCGGTAGGGTAAGCCGTGC
9 AGGCAAGCTTATTATAGCACCGTCGGGGGTACCACCACTATATCAAACTCCACTGCTCGG
10 TAAAGCATTGTAGTGAAG
11 >MIT_Spar_c117_4603 YDR232W 5' untranslated region, Contig c117 17441 - 19440, 2000 bp (revcom)
12 ACTGAAAAAAAACCAAGTACTGTTGTGATTATTGAGGGACAACGGCTAGCTCTATTTGTT
13 TTCCTTCCAACCAAACTTATATGGGCAATATATAGGAAAGAAAAAAGAAAAGAGTAGGAT
14 AAAAAAAGAAACGCGAGCTGAGAAGAGAAGGCGTGTAAAGGAAGAACGGTTGAGAGAGAG
15 CAGAGCAGGGTGCAACACACAACCGAATAGAGTATCAGCTGACGGGATGGAGGAGTTTGG
16 TACGATGCAAACGCTATATTTGTAGCAACGCATGGGTCAGAACAATGGGCAAGGCAAGAT
17 GAAAAATTTCTGTTCCTGCTCTTTCTTCATATATGAACAATGACCAAAAAGCGCCCGCGG
18 CCGCAGACCAATGAGCGACGAAGGCGGCCTTTCCGAGTGGTAGGGTAAGCCGTGCAGGCA
19 AGCTTATTATAGCACCGTCGGGGGGACCACTATATCAAGTTCCACAGCACGGTGAAGCAT
20 TGCAGTATAGTTCACAGC
21 >MIT_Smik_c228_4055 YDR232W 5' untranslated region, Contig c228 4702 - 6701(revcom), 2000 bp (revcom)
22 ACCGAGAGAAAAACTAAGTAGTGATATGATTATTGAGGACTAATGACCAGCTTTGTTTGT
23 TTTTTCTTCCAACCTAACTTATATGGGAAATATATAGGACAGAAAAAAGAAAAGAGCACG
24 AAAAAAAAGAAATGCGACCTGAGAAGGGAGGACGTGTGAAGCCAGAACGGTTGAATGACA
25 GTAGAGGAGGGTGCAACACAACCGAGTAGAGTACCAGCTGACGGAATGGAGGAGTTTGGT
26 ATGATGCAAAAGTGATGCTTTTAGCAACGCAACATTGAATTAGAACAATGGGCAAGGCAA
27 GATGAAAATTTCCGTTCCTGCTCTTTCTTCATATATGAACAATGACCAAAAAGCGCCCGC
28 AAGCGCAGACCAATGAGCGACGAAAGCGGCCTTTTGAAGGGTAGGGTAATCCATGCAGGC
29 AAGTTTATTATAGCACCGTCGGGGGGAAGCATTATATCAAACTCCACAGTACAGCGTAAC
30 ATTGCTGTATAGGCTACA
31 >WashU_Skud_Contig2069.5 YDR232W 5' untranslated region, Contig c2069 5476 - 7475, 2000 bp (revcom)
32 ACTGAAAATAATCCGAGTCGTGCTACTGTGAATATTGAGAATAGGGACTAGCTCTATTTG
33 ATTTTTCTTCCAACCAAACTTATATGGAAAATATAAAGGAAAGAAAAAAGAAAAGAATAG
34 GAAAAAAAAAAAGAAACGCGAGAGAAGAGAACCGTGTGGAGGGAAGAACGGTTGAGAGAC
35 AGCAGAGCACAGCGCAACACAACCGAGTAGAGTACCAGCAGACGGAGTGGGTAGTTTGGT
36 ACAGTGTAAAAGCTATATTTCCACCAACGCAACACTGGATCGGAACAATGGGCAAGGCAA
37 TGTGAAAAATTTCCGTTCCTGCTCTTGCTTCATATATGACAATGACCAAAAAGCGTCCGC
38 GGCCGCAGACCAATGAGCGACGAAGGCGGCCTTTCGTAGCAGCAGGGTAAGCCGCGCAAG
39 CAAGTCCGTCATAACACCGTCGAAGGGGCACCACTATATCAGCTCTTCAGCATGGTAGGC
40 CATTACAGCACAGTCTTG
41 >WashU_Sbay_Contig461.5 YDR232W 5' untranslated region, Contig c461 4000 - 5999, 2000 bp (revcom)
42 ACTAAAAAGTCCAAGTGGTGCTGTTATTATTGAGGATAGCAACTAGCTTTATTTGTTTTT
43 TCTTCCAACCAAACTTATATGGAAATCAAAGGAAGGAAAAAAAGAAAAGAACAGGAAGAA
44 AAAAAAGAAACGTGAGCTGCCGAAAGGAGAGCGTGTGGAGGGAAGAACCGTTGAGAGACA
45 ACAGAGCAGGGTGCAAACCGATTAGAGTACCAGCAGACGAGATGGGCGATGTGGTACGGT
46 GCAGAAGGTGTGGTTCCAACAGCGCAGCACCGGGACAGAACAATGGGCAAGGCAAGATGA
47 AAAATCTCCGTTCCTGCTCTTGCTTGATATATTAACAATGACCAAAAAAACGCCGGCGGG
48 CGCAGACCAATGAGCGACGAAGACGGCTTTTGGGCGGGGCAGGGTAAGATGGGACAGGCA
49 AGGTCCGCTATAGCACCGTCGAGGGGGACCGCTATATCAGCTCCCAGTACATTGCAGCAC
50 ACTCTATAGCTAGTCAAA
51 >SGD_Scer_YDR047W HEM12 "Uroporphyrinogen decarboxylase, catalyzes the fifth step in the heme biosynthetic pathway; localizes to both the cytoplasm and nucleus; activity inhibited by Cu2+, Zn2+, Fe2+, Fe3+ and sulfhydryl-specific reagents"
52 AGCGTTATAACCTGTTCTTTGCTTTATTTTTTTTTTTTTTGTTCTTCCTTTTCTCGAAGA
53 GAGCTTACCAAACACAATTCTGAGATAATGCTTGATGAATTGAAGAACCTATCGATCACT
54 CTATGTTACCTTCGTCTGGAACATCACTAATTCGAGCGGTAAAGATGAAAATGGCAGAAC
55 ATTTCGCTGGCAAAATTAAAACTCTTGCCTCATTTTTTTTTGCTTTCCTCTCCTGCCGCC
56 AAAAACCCCGAACCCTGTCCTGTATATACGAGAAACATTGAAAAAGATCGTGTATGATAG
57 CGCCAAGATGGCGGATAAACTAACACTATTGACAGGTTGAGGCCAAGGATATATTACTTG
58 CTAACAGAAAGAGATACTGTCACCACAATTGCCCGCGTACGTATACTACAACATGTTCTC
59 TATATATCACCCACTCTTTCGCAGTGCTACGTACGCCAAAAACGCGCGCATGGAAGTAAA
60 GAAGTTTTTTCTTTTAAGAGCGAAGCTCCATTAAAAGCCTTGAATATAAACTAGTGCGAA
61 GTAGTATGATCCGAAGACACCAATTGCTGGTGCAGCATAGGAATATGTGGCGTCCGAAAA
62 AGAGCCTTTAACAATCCACGGCGAAACAAGGCACCGCTGTGCATTTAAAACATGCCGTTC
63 CCGTACCAAGTTATATTGTTACGGATGAATCCAAAATAATTTGTTAAAAAATGCTGCCGT
64 TCCGTCCCATTGAGTTTTATTTTCCTTCTCATGGCACCTTCTTCGTTTCTTCATCCTGCA
65 TTAGACTTACTAGTGTGCTTGCCGGATGCGTGCTTTTTTTTTCCGGCCGACACATATCGC
66 TGAGCTGGAAGGACACCTTTTAATGTAGCCGTGCATGCGGCTCCGCGAAAAGAGCTCTGC
67 TATATTTCTCTACCTGAACTTCGAGCCGCGATCAACGAAAGCTCTCATCCAAGGCTCGTT
68 TTTCTTGACAGAAGCATGACAGTAAAATATGCGGTCATTT
69 >MIT_Spar_c130_3923 YDR047W 5' untranslated region, Contig c130 9341 - 11340, 2000 bp (revcom)
70 AGCGTTATGATGTGTTATTTGCTTTTATTTTCTTCTTTCTTTGTCTCGAAGATAACCTAG
71 CAAACACAATTCTAAGAAAATTCTCGATGAATTGGTTGTCAGCGCTTCCTATTTACTCTA
72 TGTCCACTTCGTTTGAAACATCAGTGGTTCGAGCAGTAATGACAAAAAGGGCAGAACATT
73 TCGTTGGCAAAATTTAAACTCGTGCCTCTCATTTTTTTTACTTTTCTCTCCTGCCACCAA
74 AACCCCGAACCCTGTCCCGTATATACGAGGAACATTGAAAAAAAATCGTGTATGGTAGCG
75 CCAAGATAGCGAATAAACTATCAGTATTGGCAGGGTGAAGCTAAGGATATGTTGTTTGCT
76 AACAAAGGGAAATGCTTTCGTTATAATCGCCCGCGTGCGTCTACTAAAATATGATCTATA
77 TATACCACCCAGTCTATTGCAGTGTTACGTACATCAAAATGCGCGCATGTAAGTGAACAA
78 GTTTTTTTTGTTTAAAGAGCGATTTTCCAATAAAGGCTTTGGATATACACTGGTGCAAAA
79 TATATGGTCAATGACGCCAATTACTGGTGTAGCATGAGAATACGTCGTCCGAAAGAGTTT
80 TTTTTTACAAACTACGGCAAAGCAAAGCACCACTGGCGCAATTCAAAACATGCCGTCCCC
81 GTACTAAGTTATGTACGTTATTATGGACGGATCCAAAATTATACTCTAAAATGCTGCCGT
82 TCCGTCCCATTGAGTTTTATTTTCCTTCTCGTAGCACCTTCTTCGTGTCCTTTCCTTCTT
83 CTGCATTAGGCTTACTAGCGTCCTTTCCTTGCCGGATGCGTGCTTTTTTTTTCCGGCCGA
84 CAAATCTCGCTGAGTTGGAAAGACACCTTTTATATAGCCGTACGTGCGGCTCCTCGAGAA
85 AGGCCCTGCTATATTTCACTAGCTGATCCTCGAGCTGCGATCAACGAAAGCCCCATCCAA
86 AAGGCTCCTTTTTCTTCAAAGAAGCATGACAGTAAAATAT
87 >MIT_Sbay_c896_21277 YDR047W 5' untranslated region, Contig c896 2230 - 4229(revcom), 2000 bp (revcom)
88 AGTGTTAACAGTATCTTTTGCCTTTTTTTATTCTAATAGCTACCCCAGGAATCACTATTT
89 AGCAAAGATCGTTTGCAAATTGGCCGTCAGTACGTTCTAAGTTCTTTAGAACATCATTGG
90 CTCGAGCATTAGTGACACGAATAGGAAAGCATTTCGTTGACAAAAATAAAATTGTTTCTT
91 TATTTTTTCCCTCTTTTCCATGGCGTCAAAAAACCCCGAACCCTGTATAAACGAGGAAGC
92 TGCATGGTAGCGCCAGAAAAGGCAGATAACCTTTAACAGTGCTGACAGAACAACGTCAAA
93 CATGTGCGGATAATGCCTTCGCTGACGGCAAGAAATTATATACGCCTCGAAACTGTAGAA
94 CGTCTTTTGTGCCGCTTGGTAACAAATAAACCTAGCCGGGGCCAGAATTTCACCCGTACA
95 TACTTACTGTTACATACTGCATGCACGCTACGCATTCTCACCGAACATCGAATCTGCCTG
96 CAGAAGCGAAGAAAAGCAAGTCTTCGAAGAGCAAGCTTACATCCATCGTGTTGAACACAT
97 ATGCCCAGCAAAGGGATCGGATGACGCCCAACTAACATTGGAATTTGTGACGCAAGGCTG
98 AAAGGCACTTCTCTATAGCCCACGGTGAAGCCTTACGCTATTGACAAGACAAAACATGCC
99 GATCCAAGCCAGGCGAAACGGGCCTAGCACTACGCAGCCAAACACTGGCGTTCCGCCCGT
100 CCCATCCAGTTTCATTTCTTATTTCGTTCTGCCTTGGGCCTAGCAGCGTGCTTGCCGGAT
101 GAGTTTTTTCCATTTTCCTACCGGCTCATCTCGCTAAGCTGAAAGGTCAGTTTTATAGCC
102 GTGTGCGCGGCATCGAGAGACAGGTTCAGCTAATGATATTTGCCTAATTCTCGAGCTGAG
103 GCCAATGAAGGCAGCTTCCAGGGCTCGTTTCTGCTCGGGAAAAAGCATACCACACATTTG
104 CACGGCTTTTATGTGCCATAGTGCCACCACTAGCCCCCAG
105 >WashU_Skud_Contig1362.1 YDR047W 5' untranslated region, Contig c1362 1 - 761, 2000 bp (revcom)
106 AGTGTTGATGGTATCTTTTGATTTTTTCTAGATTGGTAGCAAGCTCAATTGGCACAGCTC
107 TAAAAAAAGCCTTGTGAATTGGATAGTACCTTCTTTCGTTTGGAACATTACTGCTTCGAG
108 CAATAAACATACGAAAGGCAGAACACCTCGTTGACAAAACTGAAACTATTTCTTCAATTT
109 TTTGGCCTTTTTTCCTGCTGCCAAAAAACCCCGAATCATGTAGAAGCGAGAAGTAAAACA
110 GAGGAAGTGTATGGTAGCGCCAAGGAAAACGGGCAATACTTAGAAAGAATGACAGAGCTC
111 AGCCAAGTGTAAGCTAAGTGTTGACAAGGGAAGGTACATTGGGCCCCGAAAAAATTTGCT
112 AATGCTCGAAGAGCTCTCAATCAATCACCCACATATATGTACTACAGTATATTTATACTT
113 TCCACGCAGTCTCACGCAGTGCCACCTTCATCACCATGCGTGTAACTAATCGAGCAAGCT
114 GTTTTACGAAGGGCAGCTTTCCTATAAGCGTTTTGAACATGCATGGCTGCACTGCAATGA
115 GATCAGGCGACTCCAATTCCATAGCCTAGCACGGGATTAAGTAACGAGAAACTGAAAGAG
116 ATAATTTTACAAACCCGGACGAAGCAGAGCACTTGCTGGAACAAATCAAACATGCCGTCC
117 CCTACCAGCTCTCGAAGCGGGCCTAGCATTACTCGATCGAACGTTGCCGTTTAGTCTTAT
118 TTTCCTTTCCGTGCTGCGCTGCTTTTTTCTTGCATTGGGCT