bp_process_wormbase: move program to new Bio-DB-Ace distribution
[bioperl-live.git] / t / data / map_hem / HEM1-HEM12.fa.revcom
blobeb606f9f05b24165c5e8d738d7e13b4676ff7c5d
1 >SGD_Scer_YDR232W HEM1 "5-aminolevulinate synthase, catalyzes the first step in the heme biosynthetic pathway; an N-terminal signal sequence is required for localization to the mitochondrial matrix; expression is regulated by Hap2p-Hap3p"
2 CTTCACTACAATGCTTTACCGAGCAGTGGAGTTTGATATAGTGGTGGTACCCCCGACGGT
3 GCTATAATAAGCTTGCCTGCACGGCTTACCCTACCGCTCGGAAAGGCCGCCTTCGTCGCT
4 CATTGGTCTGCGGCCGCGGGCGCTTTTTGGTCATTGTTCATATATGAAGAAAGAGCAGGA
5 ACGGAAATTTTTCATCTTGCCTTGCCCATTGTTCTGATCCATGCGTTGTTAGAAATACAA
6 CGTTTGCATCATACCAAACTTCTCCATTCCGTCAGCTGATACTCTATTCGGTTGTGTGTT
7 GCACCCTGCTCTGCTGTCTCTCAACCGTTCTTCCTTTACACGCCTTCCCTTCTCAGCTCG
8 CGTTTCTTTTTTTTTTATCCCACTCTTTTCTTTTTTCTTTCCTATATATTGCCCATATAA
9 GTTTGGTTGGAAGGAAAACTAATAGAGCTAGTTGTTGTCCCTCAATAATCATAACAGTAC
10 TTAGGTTTTTTTTTCAGT
11 >MIT_Spar_c117_4603 YDR232W 5' untranslated region, Contig c117 17441 - 19440, 2000 bp (revcom)
12 GCTGTGAACTATACTGCAATGCTTCACCGTGCTGTGGAACTTGATATAGTGGTCCCCCCG
13 ACGGTGCTATAATAAGCTTGCCTGCACGGCTTACCCTACCACTCGGAAAGGCCGCCTTCG
14 TCGCTCATTGGTCTGCGGCCGCGGGCGCTTTTTGGTCATTGTTCATATATGAAGAAAGAG
15 CAGGAACAGAAATTTTTCATCTTGCCTTGCCCATTGTTCTGACCCATGCGTTGCTACAAA
16 TATAGCGTTTGCATCGTACCAAACTCCTCCATCCCGTCAGCTGATACTCTATTCGGTTGT
17 GTGTTGCACCCTGCTCTGCTCTCTCTCAACCGTTCTTCCTTTACACGCCTTCTCTTCTCA
18 GCTCGCGTTTCTTTTTTTATCCTACTCTTTTCTTTTTTCTTTCCTATATATTGCCCATAT
19 AAGTTTGGTTGGAAGGAAAACAAATAGAGCTAGCCGTTGTCCCTCAATAATCACAACAGT
20 ACTTGGTTTTTTTTCAGT
21 >MIT_Smik_c228_4055 YDR232W 5' untranslated region, Contig c228 4702 - 6701(revcom), 2000 bp (revcom)
22 TGTAGCCTATACAGCAATGTTACGCTGTACTGTGGAGTTTGATATAATGCTTCCCCCCGA
23 CGGTGCTATAATAAACTTGCCTGCATGGATTACCCTACCCTTCAAAAGGCCGCTTTCGTC
24 GCTCATTGGTCTGCGCTTGCGGGCGCTTTTTGGTCATTGTTCATATATGAAGAAAGAGCA
25 GGAACGGAAATTTTCATCTTGCCTTGCCCATTGTTCTAATTCAATGTTGCGTTGCTAAAA
26 GCATCACTTTTGCATCATACCAAACTCCTCCATTCCGTCAGCTGGTACTCTACTCGGTTG
27 TGTTGCACCCTCCTCTACTGTCATTCAACCGTTCTGGCTTCACACGTCCTCCCTTCTCAG
28 GTCGCATTTCTTTTTTTTCGTGCTCTTTTCTTTTTTCTGTCCTATATATTTCCCATATAA
29 GTTAGGTTGGAAGAAAAAACAAACAAAGCTGGTCATTAGTCCTCAATAATCATATCACTA
30 CTTAGTTTTTCTCTCGGT
31 >WashU_Scas_Contig721.76 YDR232W 5' untranslated region, Contig c721 147634 - 149633(revcom), 2000 bp (revcom)
32 TCCTGCTGGGGTTCCTGCTGCTGCTGCGGTGTGCTGTTGCTTTTGAAGGATGGTAGCCAG
33 CCCATTGTATATGTAGATCTTGTAGTAGTAGCAGTAGTTGTTGTTGTTGTTGTATTCCCC
34 GTATATACAGCTCAATAAGAAGAAGAAGGGGAAACTGAATTGGGCGGCTAAAATCAAAAA
35 AATCAAAAGAGCTGGGTAACAAACAGCCTGTCACCAAACACGACAAATCACGTGCCAGAT
36 CCAAATCCCGTCTTCTGATTGGCCCAAAAGCTGTGTGCGGCAGTTTCTGAGCGCGCCTTT
37 CTTTTTTGCTCAAAGCTCTATTTTCCTTACGTAACACGCCAATCCCGTCGTTTAACAATT
38 ATTCATATATACAGCACTGTATATAACAACACATCACATCATCACATCAGCTCAGCTCAT
39 CTCAAACAGAACAGAACAAATCTAGTCTATACTTGCTTGCTCGCTGGCCGCTCTATCCAC
40 CCGTCTGCTTCACAAACA
41 >WashU_Sklu_Contig2308.6 YDR232W 5' untranslated region, Contig c2308 6692 - 8691, 2000 bp (revcom)
42 AACCCGATGGCGATGATGGCTTTGAGTGGATGGTATCTTACAGGTGCTGCTGGTGTTCTA
43 CAGCCGAACGACCAAGAGGCATTCAGCTGGGCTTTAAGGAGCTGCCAGTCCACAGAAGGT
44 AAGTTTGCCCGCGCAGAGTATGCGTTAGCTTTCTTCTACGAGCGCGGTATTGGCTGCACA
45 AAGGATCCAAGCAAGGCTCTGGAACATTATAAATGTGCTGCTCAAATGGGGCATCCAAAG
46 GCTCAAGACAGGTATCGCGAACTGAATAGCTCGTAAGTAACACCTAACATTAGCTTTAAC
47 GTCGTTCTTATTGGCTCAGGCAACTGTCCACGTGATCACATACTTGATCACACCTAAAAA
48 TTTTTCAGAAAATTTCTTTTTTCCTATTGGATGGGAAGAAAAAAATAAATATATATATGT
49 ATGTGAGTAGTGGAGAGAAGACTCACCTCCCCTCTTTACAGGAATAGAACCGTCGAAAAA
50 TAGACAGACGAAGAAGGG
51 >WashU_Skud_Contig2069.5 YDR232W 5' untranslated region, Contig c2069 5476 - 7475, 2000 bp (revcom)
52 CAAGACTGTGCTGTAATGGCCTACCATGCTGAAGAGCTGATATAGTGGTGCCCCTTCGAC
53 GGTGTTATGACGGACTTGCTTGCGCGGCTTACCCTGCTGCTACGAAAGGCCGCCTTCGTC
54 GCTCATTGGTCTGCGGCCGCGGACGCTTTTTGGTCATTGTCATATATGAAGCAAGAGCAG
55 GAACGGAAATTTTTCACATTGCCTTGCCCATTGTTCCGATCCAGTGTTGCGTTGGTGGAA
56 ATATAGCTTTTACACTGTACCAAACTACCCACTCCGTCTGCTGGTACTCTACTCGGTTGT
57 GTTGCGCTGTGCTCTGCTGTCTCTCAACCGTTCTTCCCTCCACACGGTTCTCTTCTCTCG
58 CGTTTCTTTTTTTTTTTCCTATTCTTTTCTTTTTTCTTTCCTTTATATTTTCCATATAAG
59 TTTGGTTGGAAGAAAAATCAAATAGAGCTAGTCCCTATTCTCAATATTCACAGTAGCACG
60 ACTCGGATTATTTTCAGT
61 >WashU_Sbay_Contig461.5 YDR232W 5' untranslated region, Contig c461 4000 - 5999, 2000 bp (revcom)
62 TTTGACTAGCTATAGAGTGTGCTGCAATGTACTGGGAGCTGATATAGCGGTCCCCCTCGA
63 CGGTGCTATAGCGGACCTTGCCTGTCCCATCTTACCCTGCCCCGCCCAAAAGCCGTCTTC
64 GTCGCTCATTGGTCTGCGCCCGCCGGCGTTTTTTTGGTCATTGTTAATATATCAAGCAAG
65 AGCAGGAACGGAGATTTTTCATCTTGCCTTGCCCATTGTTCTGTCCCGGTGCTGCGCTGT
66 TGGAACCACACCTTCTGCACCGTACCACATCGCCCATCTCGTCTGCTGGTACTCTAATCG
67 GTTTGCACCCTGCTCTGTTGTCTCTCAACGGTTCTTCCCTCCACACGCTCTCCTTTCGGC
68 AGCTCACGTTTCTTTTTTTTCTTCCTGTTCTTTTCTTTTTTTCCTTCCTTTGATTTCCAT
69 ATAAGTTTGGTTGGAAGAAAAAACAAATAAAGCTAGTTGCTATCCTCAATAATAACAGCA
70 CCACTTGGACTTTTTAGT
71 >SGD_Scer_YDR047W HEM12 "Uroporphyrinogen decarboxylase, catalyzes the fifth step in the heme biosynthetic pathway; localizes to both the cytoplasm and nucleus; activity inhibited by Cu2+, Zn2+, Fe2+, Fe3+ and sulfhydryl-specific reagents"
72 AAATGACCGCATATTTTACTGTCATGCTTCTGTCAAGAAAAACGAGCCTTGGATGAGAGC
73 TTTCGTTGATCGCGGCTCGAAGTTCAGGTAGAGAAATATAGCAGAGCTCTTTTCGCGGAG
74 CCGCATGCACGGCTACATTAAAAGGTGTCCTTCCAGCTCAGCGATATGTGTCGGCCGGAA
75 AAAAAAAGCACGCATCCGGCAAGCACACTAGTAAGTCTAATGCAGGATGAAGAAACGAAG
76 AAGGTGCCATGAGAAGGAAAATAAAACTCAATGGGACGGAACGGCAGCATTTTTTAACAA
77 ATTATTTTGGATTCATCCGTAACAATATAACTTGGTACGGGAACGGCATGTTTTAAATGC
78 ACAGCGGTGCCTTGTTTCGCCGTGGATTGTTAAAGGCTCTTTTTCGGACGCCACATATTC
79 CTATGCTGCACCAGCAATTGGTGTCTTCGGATCATACTACTTCGCACTAGTTTATATTCA
80 AGGCTTTTAATGGAGCTTCGCTCTTAAAAGAAAAAACTTCTTTACTTCCATGCGCGCGTT
81 TTTGGCGTACGTAGCACTGCGAAAGAGTGGGTGATATATAGAGAACATGTTGTAGTATAC
82 GTACGCGGGCAATTGTGGTGACAGTATCTCTTTCTGTTAGCAAGTAATATATCCTTGGCC
83 TCAACCTGTCAATAGTGTTAGTTTATCCGCCATCTTGGCGCTATCATACACGATCTTTTT
84 CAATGTTTCTCGTATATACAGGACAGGGTTCGGGGTTTTTGGCGGCAGGAGAGGAAAGCA
85 AAAAAAAATGAGGCAAGAGTTTTAATTTTGCCAGCGAAATGTTCTGCCATTTTCATCTTT
86 ACCGCTCGAATTAGTGATGTTCCAGACGAAGGTAACATAGAGTGATCGATAGGTTCTTCA
87 ATTCATCAAGCATTATCTCAGAATTGTGTTTGGTAAGCTCTCTTCGAGAAAAGGAAGAAC
88 AAAAAAAAAAAAAATAAAGCAAAGAACAGGTTATAACGCT
89 >MIT_Spar_c130_3923 YDR047W 5' untranslated region, Contig c130 9341 - 11340, 2000 bp (revcom)
90 ATATTTTACTGTCATGCTTCTTTGAAGAAAAAGGAGCCTTTTGGATGGGGCTTTCGTTGA
91 TCGCAGCTCGAGGATCAGCTAGTGAAATATAGCAGGGCCTTTCTCGAGGAGCCGCACGTA
92 CGGCTATATAAAAGGTGTCTTTCCAACTCAGCGAGATTTGTCGGCCGGAAAAAAAAAGCA
93 CGCATCCGGCAAGGAAAGGACGCTAGTAAGCCTAATGCAGAAGAAGGAAAGGACACGAAG
94 AAGGTGCTACGAGAAGGAAAATAAAACTCAATGGGACGGAACGGCAGCATTTTAGAGTAT
95 AATTTTGGATCCGTCCATAATAACGTACATAACTTAGTACGGGGACGGCATGTTTTGAAT
96 TGCGCCAGTGGTGCTTTGCTTTGCCGTAGTTTGTAAAAAAAAACTCTTTCGGACGACGTA
97 TTCTCATGCTACACCAGTAATTGGCGTCATTGACCATATATTTTGCACCAGTGTATATCC
98 AAAGCCTTTATTGGAAAATCGCTCTTTAAACAAAAAAAACTTGTTCACTTACATGCGCGC
99 ATTTTGATGTACGTAACACTGCAATAGACTGGGTGGTATATATAGATCATATTTTAGTAG
100 ACGCACGCGGGCGATTATAACGAAAGCATTTCCCTTTGTTAGCAAACAACATATCCTTAG
101 CTTCACCCTGCCAATACTGATAGTTTATTCGCTATCTTGGCGCTACCATACACGATTTTT
102 TTTCAATGTTCCTCGTATATACGGGACAGGGTTCGGGGTTTTGGTGGCAGGAGAGAAAAG
103 TAAAAAAAATGAGAGGCACGAGTTTAAATTTTGCCAACGAAATGTTCTGCCCTTTTTGTC
104 ATTACTGCTCGAACCACTGATGTTTCAAACGAAGTGGACATAGAGTAAATAGGAAGCGCT
105 GACAACCAATTCATCGAGAATTTTCTTAGAATTGTGTTTGCTAGGTTATCTTCGAGACAA
106 AGAAAGAAGAAAATAAAAGCAAATAACACATCATAACGCT
107 >MIT_Sbay_c896_21277 YDR047W 5' untranslated region, Contig c896 2230 - 4229(revcom), 2000 bp (revcom)
108 CTGGGGGCTAGTGGTGGCACTATGGCACATAAAAGCCGTGCAAATGTGTGGTATGCTTTT
109 TCCCGAGCAGAAACGAGCCCTGGAAGCTGCCTTCATTGGCCTCAGCTCGAGAATTAGGCA
110 AATATCATTAGCTGAACCTGTCTCTCGATGCCGCGCACACGGCTATAAAACTGACCTTTC
111 AGCTTAGCGAGATGAGCCGGTAGGAAAATGGAAAAAACTCATCCGGCAAGCACGCTGCTA
112 GGCCCAAGGCAGAACGAAATAAGAAATGAAACTGGATGGGACGGGCGGAACGCCAGTGTT
113 TGGCTGCGTAGTGCTAGGCCCGTTTCGCCTGGCTTGGATCGGCATGTTTTGTCTTGTCAA
114 TAGCGTAAGGCTTCACCGTGGGCTATAGAGAAGTGCCTTTCAGCCTTGCGTCACAAATTC
115 CAATGTTAGTTGGGCGTCATCCGATCCCTTTGCTGGGCATATGTGTTCAACACGATGGAT
116 GTAAGCTTGCTCTTCGAAGACTTGCTTTTCTTCGCTTCTGCAGGCAGATTCGATGTTCGG
117 TGAGAATGCGTAGCGTGCATGCAGTATGTAACAGTAAGTATGTACGGGTGAAATTCTGGC
118 CCCGGCTAGGTTTATTTGTTACCAAGCGGCACAAAAGACGTTCTACAGTTTCGAGGCGTA
119 TATAATTTCTTGCCGTCAGCGAAGGCATTATCCGCACATGTTTGACGTTGTTCTGTCAGC
120 ACTGTTAAAGGTTATCTGCCTTTTCTGGCGCTACCATGCAGCTTCCTCGTTTATACAGGG
121 TTCGGGGTTTTTTGACGCCATGGAAAAGAGGGAAAAAATAAAGAAACAATTTTATTTTTG
122 TCAACGAAATGCTTTCCTATTCGTGTCACTAATGCTCGAGCCAATGATGTTCTAAAGAAC
123 TTAGAACGTACTGACGGCCAATTTGCAAACGATCTTTGCTAAATAGTGATTCCTGGGGTA
124 GCTATTAGAATAAAAAAAGGCAAAAGATACTGTTAACACT
125 >WashU_Skud_Contig1362.1 YDR047W 5' untranslated region, Contig c1362 1 - 761, 2000 bp (revcom)
126 AGCCCAATGCAAGAAAAAAGCAGCGCAGCACGGAAAGGAAAATAAGACTAAACGGCAACG
127 TTCGATCGAGTAATGCTAGGCCCGCTTCGAGAGCTGGTAGGGGACGGCATGTTTGATTTG
128 TTCCAGCAAGTGCTCTGCTTCGTCCGGGTTTGTAAAATTATCTCTTTCAGTTTCTCGTTA
129 CTTAATCCCGTGCTAGGCTATGGAATTGGAGTCGCCTGATCTCATTGCAGTGCAGCCATG
130 CATGTTCAAAACGCTTATAGGAAAGCTGCCCTTCGTAAAACAGCTTGCTCGATTAGTTAC
131 ACGCATGGTGATGAAGGTGGCACTGCGTGAGACTGCGTGGAAAGTATAAATATACTGTAG
132 TACATATATGTGGGTGATTGATTGAGAGCTCTTCGAGCATTAGCAAATTTTTTCGGGGCC
133 CAATGTACCTTCCCTTGTCAACACTTAGCTTACACTTGGCTGAGCTCTGTCATTCTTTCT
134 AAGTATTGCCCGTTTTCCTTGGCGCTACCATACACTTCCTCTGTTTTACTTCTCGCTTCT
135 ACATGATTCGGGGTTTTTTGGCAGCAGGAAAAAAGGCCAAAAAATTGAAGAAATAGTTTC
136 AGTTTTGTCAACGAGGTGTTCTGCCTTTCGTATGTTTATTGCTCGAAGCAGTAATGTTCC
137 AAACGAAAGAAGGTACTATCCAATTCACAAGGCTTTTTTTAGAGCTGTGCCAATTGAGCT
138 TGCTACCAATCTAGAAAAAATCAAAAGATACCATCAACACT
139 >WashU_Scas_Contig569.6 YDR047W 5' untranslated region, Contig c569 10116 - 12115, 2000 bp (revcom)
140 CCATAGTTCCTCAATATAATTTTTTAGACTTCCTGGCCTTTAAACCGGAGAAGAAACCCT
141 CACATGAAACAAAAAGTCTTAAAAGAAGGTCATTGGACAAGTATCATTGTAATGTAGGAC
142 GAATTAGTTCAGTCTTAAGAGCGGTTAAGCATGTGTAAAAAAATTATGTGAAGAATATTT
143 GAAAACTTTTTTTTTCCACTAACTTTTGAGGAAAAACAGTTAGAACTTTGACACTCTTTT
144 TTGCCTTAATATTAATATAATTGTCATGTCTGTTTTTGATAAGAAATGAATAATGGAATC
145 TAACTTTAACTATAAGCTATGCCTCACCACAGCACCTCGAGGCTGGATTGTAAATGAAAT
146 GTTATTGTAGCTCAGAGGTTGGTGGATGTGAATATGGATATTCCATTCATGACTAAATTG
147 ACAACAACGTAATTGAATCAACCTCTTATGAAAAACGTCAGATTGTTCTCACAACTCTCT
148 AAATCAAGAAGGGAAGAAAAACTTACTGTAAAAGCGATAATATGTCATCTCCACCTCTCG
149 TATATATTTTTATTCAAAAATAAATAAAAATGATTTTGGAAGTATATTATAACTGAGTTA
150 TTGGTTTTTTTATACTGGAGATTATTCGTTTTCGTCCTCGTTTACTCGATACTAAGGTAT
151 TAAGAATCTTTTTACCGTCACACTTCCTTCTCAACCCTTAAATTTCCGTTTTGTGGGGAA
152 CAACATATTTAAGGACTTTATTTGATGGTTTGATAAAGGTTGGAGAAGTAATCACTAATG
153 TATTTTGTTATCAATTTACAAAGATTGATAGGTGACGTTAATTGATACGTAGCGTTATTT
154 GACATTCTTGGCTCGTTTATATTTGGCGCGAGCCGCAACGTTAACCGAATCGTACGGTAG
155 CTGTCAATTGGCGAATATCCTTTAAAAGGAAACAGTCATCATTTGTTCCACGTTTCCTCC
156 ACCAATCCTCCCACTATTTGACACCCAACGACTTGAAAAA