bp_process_wormbase: move program to new Bio-DB-Ace distribution
[bioperl-live.git] / t / data / map_hem / HEM1-HEM13.fa
blobdcb27339e06c1ae1e4869c9fe2228f1a65ddba7e
1 >SGD_Scer_YDR232W HEM1 "5-aminolevulinate synthase, catalyzes the first step in the heme biosynthetic pathway; an N-terminal signal sequence is required for localization to the mitochondrial matrix; expression is regulated by Hap2p-Hap3p"
2 ACTGAAAAAAAAACCTAAGTACTGTTATGATTATTGAGGGACAACAACTAGCTCTATTAG
3 TTTTCCTTCCAACCAAACTTATATGGGCAATATATAGGAAAGAAAAAAGAAAAGAGTGGG
4 ATAAAAAAAAAAGAAACGCGAGCTGAGAAGGGAAGGCGTGTAAAGGAAGAACGGTTGAGA
5 GACAGCAGAGCAGGGTGCAACACACAACCGAATAGAGTATCAGCTGACGGAATGGAGAAG
6 TTTGGTATGATGCAAACGTTGTATTTCTAACAACGCATGGATCAGAACAATGGGCAAGGC
7 AAGATGAAAAATTTCCGTTCCTGCTCTTTCTTCATATATGAACAATGACCAAAAAGCGCC
8 CGCGGCCGCAGACCAATGAGCGACGAAGGCGGCCTTTCCGAGCGGTAGGGTAAGCCGTGC
9 AGGCAAGCTTATTATAGCACCGTCGGGGGTACCACCACTATATCAAACTCCACTGCTCGG
10 TAAAGCATTGTAGTGAAG
11 >MIT_Spar_c117_4603 YDR232W 5' untranslated region, Contig c117 17441 - 19440, 2000 bp (revcom)
12 ACTGAAAAAAAACCAAGTACTGTTGTGATTATTGAGGGACAACGGCTAGCTCTATTTGTT
13 TTCCTTCCAACCAAACTTATATGGGCAATATATAGGAAAGAAAAAAGAAAAGAGTAGGAT
14 AAAAAAAGAAACGCGAGCTGAGAAGAGAAGGCGTGTAAAGGAAGAACGGTTGAGAGAGAG
15 CAGAGCAGGGTGCAACACACAACCGAATAGAGTATCAGCTGACGGGATGGAGGAGTTTGG
16 TACGATGCAAACGCTATATTTGTAGCAACGCATGGGTCAGAACAATGGGCAAGGCAAGAT
17 GAAAAATTTCTGTTCCTGCTCTTTCTTCATATATGAACAATGACCAAAAAGCGCCCGCGG
18 CCGCAGACCAATGAGCGACGAAGGCGGCCTTTCCGAGTGGTAGGGTAAGCCGTGCAGGCA
19 AGCTTATTATAGCACCGTCGGGGGGACCACTATATCAAGTTCCACAGCACGGTGAAGCAT
20 TGCAGTATAGTTCACAGC
21 >MIT_Smik_c228_4055 YDR232W 5' untranslated region, Contig c228 4702 - 6701(revcom), 2000 bp (revcom)
22 ACCGAGAGAAAAACTAAGTAGTGATATGATTATTGAGGACTAATGACCAGCTTTGTTTGT
23 TTTTTCTTCCAACCTAACTTATATGGGAAATATATAGGACAGAAAAAAGAAAAGAGCACG
24 AAAAAAAAGAAATGCGACCTGAGAAGGGAGGACGTGTGAAGCCAGAACGGTTGAATGACA
25 GTAGAGGAGGGTGCAACACAACCGAGTAGAGTACCAGCTGACGGAATGGAGGAGTTTGGT
26 ATGATGCAAAAGTGATGCTTTTAGCAACGCAACATTGAATTAGAACAATGGGCAAGGCAA
27 GATGAAAATTTCCGTTCCTGCTCTTTCTTCATATATGAACAATGACCAAAAAGCGCCCGC
28 AAGCGCAGACCAATGAGCGACGAAAGCGGCCTTTTGAAGGGTAGGGTAATCCATGCAGGC
29 AAGTTTATTATAGCACCGTCGGGGGGAAGCATTATATCAAACTCCACAGTACAGCGTAAC
30 ATTGCTGTATAGGCTACA
31 >WashU_Skud_Contig2069.5 YDR232W 5' untranslated region, Contig c2069 5476 - 7475, 2000 bp (revcom)
32 ACTGAAAATAATCCGAGTCGTGCTACTGTGAATATTGAGAATAGGGACTAGCTCTATTTG
33 ATTTTTCTTCCAACCAAACTTATATGGAAAATATAAAGGAAAGAAAAAAGAAAAGAATAG
34 GAAAAAAAAAAAGAAACGCGAGAGAAGAGAACCGTGTGGAGGGAAGAACGGTTGAGAGAC
35 AGCAGAGCACAGCGCAACACAACCGAGTAGAGTACCAGCAGACGGAGTGGGTAGTTTGGT
36 ACAGTGTAAAAGCTATATTTCCACCAACGCAACACTGGATCGGAACAATGGGCAAGGCAA
37 TGTGAAAAATTTCCGTTCCTGCTCTTGCTTCATATATGACAATGACCAAAAAGCGTCCGC
38 GGCCGCAGACCAATGAGCGACGAAGGCGGCCTTTCGTAGCAGCAGGGTAAGCCGCGCAAG
39 CAAGTCCGTCATAACACCGTCGAAGGGGCACCACTATATCAGCTCTTCAGCATGGTAGGC
40 CATTACAGCACAGTCTTG
41 >WashU_Sbay_Contig461.5 YDR232W 5' untranslated region, Contig c461 4000 - 5999, 2000 bp (revcom)
42 ACTAAAAAGTCCAAGTGGTGCTGTTATTATTGAGGATAGCAACTAGCTTTATTTGTTTTT
43 TCTTCCAACCAAACTTATATGGAAATCAAAGGAAGGAAAAAAAGAAAAGAACAGGAAGAA
44 AAAAAAGAAACGTGAGCTGCCGAAAGGAGAGCGTGTGGAGGGAAGAACCGTTGAGAGACA
45 ACAGAGCAGGGTGCAAACCGATTAGAGTACCAGCAGACGAGATGGGCGATGTGGTACGGT
46 GCAGAAGGTGTGGTTCCAACAGCGCAGCACCGGGACAGAACAATGGGCAAGGCAAGATGA
47 AAAATCTCCGTTCCTGCTCTTGCTTGATATATTAACAATGACCAAAAAAACGCCGGCGGG
48 CGCAGACCAATGAGCGACGAAGACGGCTTTTGGGCGGGGCAGGGTAAGATGGGACAGGCA
49 AGGTCCGCTATAGCACCGTCGAGGGGGACCGCTATATCAGCTCCCAGTACATTGCAGCAC
50 ACTCTATAGCTAGTCAAA
51 >SGD_Scer_YDR044W HEM13 "Coproporphyrinogen III oxidase, an oxygen requiring enzyme that catalyzes the sixth step in the heme biosynthetic pathway; localizes to the mitochondrial inner membrane; transcription is repressed by oxygen and heme (via Rox1p and Hap1p)"
52 CTTTATGTGTATTTAATTGTGTTCGAAGAGTTCGGTTTGCTATGTTTGATTTGCGAAAAG
53 AAAGCTTTTGATATGCTCAAAAAAAGAAAACCCGGAGAATAAAAGCTTAACAAAGAAAGA
54 CAATAGGTGGAAAAAAAAAGGAAAATCCGTGTCCTTATATAGCCTTTCGAAACGAGAACA
55 ATGGGCAAAGCAAGCTTTATCTTCGGATCGTCCGTCAGCGCTTTGGTTGCAGTCTTATGC
56 TTTGTTCAAGCTGGAGCGTTATTGGTGGGAGAACCAGAAAAGGCGAAAGCGTAGCGTTCT
57 TTGAAATTTGGCTTCTGTTCCTGCGACTCGTTTAAAAGTAGAAGGGCCCGCGGAGCCGCT
58 GTGAAAGATTTCTTTTACTCTTTCAGCGCAGAAATCTCGCAGGAGCTCAGCAGAAAGTGC
59 CTATGACGGTAATCCCAGGGGCTAATGGTGTGAAGGCACTTTCTAAACAATTGAAATTAA
60 AATACCGTGCCTATAGTAACTTTTTTTTACGCTGTGAACCGTTCAACACACAGTAAAAAC
61 TCCGCAGGAAATGGTTTGAAGAATCTTAATCACGAATTAGGCGTATTGTTTTTCCCAACA
62 GTGAACGAGAGGACAAACTCCAGAGGATTTGCGGGCTTGATGATAAAATGTATTGTTGAA
63 AAGATCGCGAATGCAACAATTACGGTGGGGAGAAATATCAACAAAAGGGCAAGGCTATGC
64 CTTCTGGAAAGTGGCAGACTTGCACTTTCCTCGAAAAGAAAAATGACCGCAAGATCCGGT
65 TGTTCTCAACCTTCTACATTAAGACATACTTCTACGATTTTCGAATGCCGAAGCAACTAT
66 CGCTGAAATTTGTCATGTCAAAATTGCTACTGGGGGAGAAGAATATATATGGAAGTAATT
67 ATTATTTACGTTGCTGAAATGGCAGGTTAGACGCATGTTTTGCAAAATAAGTGGTTTTGA
68 AAAGAATTGATACTAGGAATCGGTGCAATACCTTCTACCT
69 >MIT_Spar_c130_3912 YDR044W 5' untranslated region, Contig c130 4128 - 6127, 2000 bp (revcom)
70 CTTTATATGTGTGTTTTGTGGTGTTCGAAATTGGTTTCTTTTGTTCGACTTGCGAGAAGA
71 AAGCTATCAATATGCTTTCCAAAAAAAGCTGGAGAATAAAAGCTTAACAAAGAAAGACAA
72 TAGGCGGAAAAAAAGGAAAATCCGTGTCCTTATATAGCCTTTTCGAAACGAGAACAATGG
73 ACAAATCAAGCTTTATCTATGGGTTGTCAGCTCTTTGGTTGCAGTCTTGTGCTTGGTTCA
74 AGCTGGGGCATTATTGGTGGGAGAAGCCAGAAAAGGCGAAAGCGTAGCGTTCTTTGAAAT
75 TTGGATTCTGTTCCTGCGACTCGTTTAAAAGAAGAAGGGCTGCGGAGCCACTGTGAAAGA
76 CTTGTTGTGCTCTTTCAACTAAGAAATCTGGCAGGAACTCGATATAAAGTGCCTGTGACA
77 GTAATCTCAGGGGGCTAATGGTGTGAAGGCACTTTCTAAACAATTGAAAATTGAAATACC
78 GTGCCTATGGTAACTTTTTTTTACGCTGCGAACCGTTCAACACACATTGAAAACCCCGCA
79 GCAATTGTTCTGAAGAATCTTAATCACGAATTAGGCGTATTGTTTCTCCCAACAGTGTAC
80 GAGCGGACGAAACTCTAGAGGATTTGCAGGCTCGGTGATAAAATGTATTGTTGAAAAGAA
81 CGCGAATGCAACGATTGTGGTGGAGAGAAATATCAACAGGGCAAGGCAAGGCTATGCTCT
82 TTTGGAAGTGGCGGACTTGCACTTTCTTGAAAAGAAAAATGACCGCAAGATCCGGTTGTT
83 CATAACTTTCTACAATAAGGCATACTTCTACGGTTTTCCAATGCTGAGGCAACTATCGCT
84 ATAAAATCGCTGCTAGGAGAAGATTATATATGGACGTAAATATTTTTTACGTTACTAAAA
85 TTCTAGGTTAGAGGCACGTTTTGCAGAACCAGTGGCCTTGGAAAGGTGTTGCTACAAATT
86 TATGCAATTTCTTCAACTTGCCAGGTGGTCTTGGATGATC
87 >MIT_Sbay_c896_21290 YDR044W 5' untranslated region, Contig c896 7383 - 9382(revcom), 2000 bp (revcom)
88 CTTGTTATGTGTGTTTGTGGTGATTGCGGTTTGGTTTTTCTGATTCGTATGACAGAAAGA
89 AAAAAATTCAGTTTACCTTGTAAGGTGATTAGGAGAAGAAAAAAAGCTTATTGGCAGCGA
90 ACAATAGGTGAAAAAAAAAAAGAAAATGCGTGTCCTTATATAGCTTTCTCGAAGGGAGAA
91 CAATGGATAAATCAAAGCTTATCTACGGGTCAACAGCTCTTTGGTTGCTGTCTTGCTCTA
92 GGTCCAAGCTGGGGCATAATTGGTGGGAGAAGCCAGAAAATGCGAAAGCGTACCGTTCTG
93 TGAAAAATGGCTTCGGTTCCTGCGACTCGTTTAAAAAGAAAAGGGCCCGCGCAGCCTGTG
94 TGAAATGTTCGTTTTGCCCTTCCCAGAGAGAAATCTTGCAGGAGCCTCAATACAATGTGC
95 CTGCGGATGGAATACCAGGGGATAAAGGCGTGAAGGCACTCCCTGAACAATTGAAAATTG
96 GAAAAAAAAAGTGCCTGTGATGAATCTTATACGTTGGGAAAACTCCAAGACACTTTTAAA
97 ACTCCGCAGAGATTGTTTGGAGGGACCTTGACCACGAGTTGGGAGTATTGTTTTTTCCTG
98 GAAGGAACGAGCGGAACTCTTGGGGATTTGCGGGCTCGCTAATAAAAAGTGTCTTGTTGA
99 AGAAAAGTAGAATGCGACTAAAACGGTGGAGGAAAATATCAACAAGGCAAGGCTATGCCT
100 TTCGAAGAAAAGCGGACTTGCAATTGCACAACCGTATCGAAGAGAATTGAGAAGGGGGTG
101 CAAAGTGATCCGGTTGTTCATATTTCTTCACCAATTGATACAATTATCTACGTTTGTTCT
102 GTTGACCAATCCAACGGGGACTCTGTATGACATAAGTCTTCCTTACATTGCTAAGATCCA
103 AGATCAGACCCGTAGATGAGTTCTGCACCAAAGAGTTGTTAACCGTCTTGCCTGAATAAT
104 TTTAAGTTGTCGCGATCCTCTTACAAGGTGTTCTTATTTC
105 >WashU_Smik_Contig2283.3 YDR044W 5' untranslated region, Contig c2283 2261 - 4260(revcom), 2000 bp (revcom)
106 CTTTATTGAGGATTTGTGGCGTTTGAGGTTTGGTTTTTTATTCAATTTGAAAGAAGAAAA
107 CTATCGTTATACTTTCGAAGAAAACACGGGGAATAAAAGCTTAACAGGTGAGACAATAGG
108 TGGAAAAAAAGGAAAATATGTGTCTTTATATAGCCTTTTCAAAAAGAGAACAATGGTCAA
109 ATAAAGGTTTATCTACGAGTCGACAGTTCGTTGGCTGCAGTGTTACGCTTGGTTGAAGCT
110 GGGGCATTATTGGTGGAAGAAGCCAGAAAAGACGAAAGAGTAGCGTAGCGTTCTTTCAAA
111 TTTTGGTTTCGGGTTCCTGCGACTCGTTTAAAAAAGAAAAGGGCCCGCGGCCCCGCCGTG
112 AAACACTTCGTCTTGCTCTTCCCACCCAGAAAACTTGTAGGAGCCTCAGTTACAAAGTGC
113 CTGTAATGGAAATCTTAGGGGGCTACTATTGTAAAGGCAATTTCTGAACAATTGAAAGTG
114 AAAATATCGTGCCTGTGGTAACTTTCTTATACGCCGTGAAACGTTTAACATACGTTGAAA
115 ACTCCGCAGGGATTGGTTTGGAAAATTATAGTCACGAATTAGGCGTATTGTCTTTCAAGA
116 AGGTACGAGCGGATGAACTTCTTGAGGATTTGCGGGTTCGGTGATAAAAAATGTATTGTT
117 GAAAAGAACGCGAATGCAACAATTACGGTGGAGAAAAATATTAACAAGGGAAGGCAAGGC
118 TATGTTCTATTGAGAAGCGGCGGACTTGCACTTTCCTCGAAGAAAAAAATGTCTTCAAGA
119 TCCAATGTTCATATAACTTTCTACAATAAGGTATCCTTCTACGATCTTTCAATGTTAAGA
120 TTGAAATCAATGTAAAAAGCACCATGTTGAATACTACTGCTAGGAGGAGATCACATATGA
121 ATGTGATTATTATTTATATTAGTAAATTTTCAGGTTAGGAAGAAGTTATGTGACGCTTTA
122 GCTTTGGAAATTTGTTGCGGGAAACTGATAACATTCTTTT