bp_process_wormbase: move program to new Bio-DB-Ace distribution
[bioperl-live.git] / t / data / map_hem / HEM1-HEM14.fa
blob0dc553a445dabff0bed75fa6443e3d32de76bf94
1 >SGD_Scer_YDR232W HEM1 "5-aminolevulinate synthase, catalyzes the first step in the heme biosynthetic pathway; an N-terminal signal sequence is required for localization to the mitochondrial matrix; expression is regulated by Hap2p-Hap3p"
2 ACTGAAAAAAAAACCTAAGTACTGTTATGATTATTGAGGGACAACAACTAGCTCTATTAG
3 TTTTCCTTCCAACCAAACTTATATGGGCAATATATAGGAAAGAAAAAAGAAAAGAGTGGG
4 ATAAAAAAAAAAGAAACGCGAGCTGAGAAGGGAAGGCGTGTAAAGGAAGAACGGTTGAGA
5 GACAGCAGAGCAGGGTGCAACACACAACCGAATAGAGTATCAGCTGACGGAATGGAGAAG
6 TTTGGTATGATGCAAACGTTGTATTTCTAACAACGCATGGATCAGAACAATGGGCAAGGC
7 AAGATGAAAAATTTCCGTTCCTGCTCTTTCTTCATATATGAACAATGACCAAAAAGCGCC
8 CGCGGCCGCAGACCAATGAGCGACGAAGGCGGCCTTTCCGAGCGGTAGGGTAAGCCGTGC
9 AGGCAAGCTTATTATAGCACCGTCGGGGGTACCACCACTATATCAAACTCCACTGCTCGG
10 TAAAGCATTGTAGTGAAG
11 >MIT_Spar_c117_4603 YDR232W 5' untranslated region, Contig c117 17441 - 19440, 2000 bp (revcom)
12 ACTGAAAAAAAACCAAGTACTGTTGTGATTATTGAGGGACAACGGCTAGCTCTATTTGTT
13 TTCCTTCCAACCAAACTTATATGGGCAATATATAGGAAAGAAAAAAGAAAAGAGTAGGAT
14 AAAAAAAGAAACGCGAGCTGAGAAGAGAAGGCGTGTAAAGGAAGAACGGTTGAGAGAGAG
15 CAGAGCAGGGTGCAACACACAACCGAATAGAGTATCAGCTGACGGGATGGAGGAGTTTGG
16 TACGATGCAAACGCTATATTTGTAGCAACGCATGGGTCAGAACAATGGGCAAGGCAAGAT
17 GAAAAATTTCTGTTCCTGCTCTTTCTTCATATATGAACAATGACCAAAAAGCGCCCGCGG
18 CCGCAGACCAATGAGCGACGAAGGCGGCCTTTCCGAGTGGTAGGGTAAGCCGTGCAGGCA
19 AGCTTATTATAGCACCGTCGGGGGGACCACTATATCAAGTTCCACAGCACGGTGAAGCAT
20 TGCAGTATAGTTCACAGC
21 >MIT_Smik_c228_4055 YDR232W 5' untranslated region, Contig c228 4702 - 6701(revcom), 2000 bp (revcom)
22 ACCGAGAGAAAAACTAAGTAGTGATATGATTATTGAGGACTAATGACCAGCTTTGTTTGT
23 TTTTTCTTCCAACCTAACTTATATGGGAAATATATAGGACAGAAAAAAGAAAAGAGCACG
24 AAAAAAAAGAAATGCGACCTGAGAAGGGAGGACGTGTGAAGCCAGAACGGTTGAATGACA
25 GTAGAGGAGGGTGCAACACAACCGAGTAGAGTACCAGCTGACGGAATGGAGGAGTTTGGT
26 ATGATGCAAAAGTGATGCTTTTAGCAACGCAACATTGAATTAGAACAATGGGCAAGGCAA
27 GATGAAAATTTCCGTTCCTGCTCTTTCTTCATATATGAACAATGACCAAAAAGCGCCCGC
28 AAGCGCAGACCAATGAGCGACGAAAGCGGCCTTTTGAAGGGTAGGGTAATCCATGCAGGC
29 AAGTTTATTATAGCACCGTCGGGGGGAAGCATTATATCAAACTCCACAGTACAGCGTAAC
30 ATTGCTGTATAGGCTACA
31 >WashU_Skud_Contig2069.5 YDR232W 5' untranslated region, Contig c2069 5476 - 7475, 2000 bp (revcom)
32 ACTGAAAATAATCCGAGTCGTGCTACTGTGAATATTGAGAATAGGGACTAGCTCTATTTG
33 ATTTTTCTTCCAACCAAACTTATATGGAAAATATAAAGGAAAGAAAAAAGAAAAGAATAG
34 GAAAAAAAAAAAGAAACGCGAGAGAAGAGAACCGTGTGGAGGGAAGAACGGTTGAGAGAC
35 AGCAGAGCACAGCGCAACACAACCGAGTAGAGTACCAGCAGACGGAGTGGGTAGTTTGGT
36 ACAGTGTAAAAGCTATATTTCCACCAACGCAACACTGGATCGGAACAATGGGCAAGGCAA
37 TGTGAAAAATTTCCGTTCCTGCTCTTGCTTCATATATGACAATGACCAAAAAGCGTCCGC
38 GGCCGCAGACCAATGAGCGACGAAGGCGGCCTTTCGTAGCAGCAGGGTAAGCCGCGCAAG
39 CAAGTCCGTCATAACACCGTCGAAGGGGCACCACTATATCAGCTCTTCAGCATGGTAGGC
40 CATTACAGCACAGTCTTG
41 >WashU_Sbay_Contig461.5 YDR232W 5' untranslated region, Contig c461 4000 - 5999, 2000 bp (revcom)
42 ACTAAAAAGTCCAAGTGGTGCTGTTATTATTGAGGATAGCAACTAGCTTTATTTGTTTTT
43 TCTTCCAACCAAACTTATATGGAAATCAAAGGAAGGAAAAAAAGAAAAGAACAGGAAGAA
44 AAAAAAGAAACGTGAGCTGCCGAAAGGAGAGCGTGTGGAGGGAAGAACCGTTGAGAGACA
45 ACAGAGCAGGGTGCAAACCGATTAGAGTACCAGCAGACGAGATGGGCGATGTGGTACGGT
46 GCAGAAGGTGTGGTTCCAACAGCGCAGCACCGGGACAGAACAATGGGCAAGGCAAGATGA
47 AAAATCTCCGTTCCTGCTCTTGCTTGATATATTAACAATGACCAAAAAAACGCCGGCGGG
48 CGCAGACCAATGAGCGACGAAGACGGCTTTTGGGCGGGGCAGGGTAAGATGGGACAGGCA
49 AGGTCCGCTATAGCACCGTCGAGGGGGACCGCTATATCAGCTCCCAGTACATTGCAGCAC
50 ACTCTATAGCTAGTCAAA
51 >SGD_Scer_YER014W HEM14 "Protoporphyrinogen oxidase, a mitochondrial enzyme that catalyzes the seventh step in the heme biosynthetic pathway, converting protoporphyrinogen IX to protoporphyrin IX"
52 TATACAAGCTCTTTTTGGCGTTCTCAATTGCACTTTACTCGATATGTTTGAATTGGTGTT
53 CTTCGCGAATATCTCTATTGTTCTCTCTATTATACTATTTCTTTTTTTGAATACTCCGCG
54 ACTCCGAAGCAACAAAGTGTCGAAGGCAAGTTCAAAGGCGTTTTGTAACTAAACGAGCAA
55 TGGCAGCTTTCAATTAAAGAAAGGTTAGCGTTACTCTGTGATTTTTTTCATGTAAAAATT
56 CTCAAGAGAGATAAAGTTGTTAAAAAATTAAATATAGGTCTATAAAACTCGATAATTATA
57 ATGCATAAAAAGCTAACAATGT
58 >MIT_Spar_c425_6072 YER014W 5' untranslated region, Contig c425 34016 - 36015, 2000 bp (revcom)
59 TATTCGAGCCCTTTCCCGCGTTCCCAATTGTACCTTCCTCGATAGGATTGAATTGGTATC
60 CTTCGCGGATCTCTCTATTGTTCTCTCTATTATTCTTTTTCTTTTTTAAATACTCCGCGA
61 CTCCGAAGCAACAAAATGTCGAAGGCAAGATGAAAGGCGTTTTGCAACTAAACGAGTAAT
62 GGCAGCTTTTAATTAAATAACGGTCAGCATTACTCTATAACTTTTCACATAAAATCCTCG
63 AAGAAGGAAAAATTGATAATCAATTTACCGAAGAATGAATATAGGTCTATAAAAATTCAA
64 TAATTATAGATGCATAAAAAGC
65 >MIT_Smik_c283_5928 YER014W 5' untranslated region, Contig c283 42606 - 44605, 2000 bp (revcom)
66 TATTGAAGCTCTCTCCACTATTTCTTTAATCGCGCTATACTAGATATGGTTAAACTGCTA
67 TCTTTTGCAAATCCCTCTATTGTTCTTTCCATTACTCTTTTCTTTTTTAAATACGGACTC
68 CGAAGCAACAAGGTCGAAGGCAAGCTGAAAGGCATTTTACAACTAAACGAGCAATGGTAG
69 CTTTTGATTGAATAAATTATTATCATTATTTTGTTATTTGTCCCACGAAATTCTCGTTGA
70 AAGCAAGGTTCGTAAGGATTTATCAAATGTTAAATATAGATCTATAAAAATTGAATAGTA
71 ATAATAACAAGGGATGGTGTTA
72 >MIT_Sbay_c84_6418 YER014W 5' untranslated region, Contig c84 10802 - 12801(revcom), 2000 bp (revcom)
73 TGTCGAAGTTCTCCTTTATTCCGCTGTTTCTTACGGAATCCAGCGAGACTGTTGTCCTTT
74 CGCATCCTTCTATTGTTCTTCCTTATTGTTCTCGTTTTTTTTATACTCTGCGACTCCGAA
75 ACAACAAAATCTCGAAGGCAAGCTAAGGTAAAAATATTCACCACTAAACGAGCAATGACA
76 GTTATATTCAAACGTCATTCTACTTTTTTGCCAGAGAAGTCCTCACTGGAGACGAAGTTG
77 GTAAATGCTTTATTTATATTAAACGTAGATCTATAAAGTTTAAATAGTTTATAATGCTTA
78 ACAAGGGACGATGTTATCTCTT