bp_process_wormbase: move program to new Bio-DB-Ace distribution
[bioperl-live.git] / t / data / map_hem / HEM1-HEM2.fa
blob98cecbcac6a3bfafc1691815c86c3f4836e1b539
1 >SGD_Scer_YDR232W HEM1 "5-aminolevulinate synthase, catalyzes the first step in the heme biosynthetic pathway; an N-terminal signal sequence is required for localization to the mitochondrial matrix; expression is regulated by Hap2p-Hap3p"
2 ACTGAAAAAAAAACCTAAGTACTGTTATGATTATTGAGGGACAACAACTAGCTCTATTAG
3 TTTTCCTTCCAACCAAACTTATATGGGCAATATATAGGAAAGAAAAAAGAAAAGAGTGGG
4 ATAAAAAAAAAAGAAACGCGAGCTGAGAAGGGAAGGCGTGTAAAGGAAGAACGGTTGAGA
5 GACAGCAGAGCAGGGTGCAACACACAACCGAATAGAGTATCAGCTGACGGAATGGAGAAG
6 TTTGGTATGATGCAAACGTTGTATTTCTAACAACGCATGGATCAGAACAATGGGCAAGGC
7 AAGATGAAAAATTTCCGTTCCTGCTCTTTCTTCATATATGAACAATGACCAAAAAGCGCC
8 CGCGGCCGCAGACCAATGAGCGACGAAGGCGGCCTTTCCGAGCGGTAGGGTAAGCCGTGC
9 AGGCAAGCTTATTATAGCACCGTCGGGGGTACCACCACTATATCAAACTCCACTGCTCGG
10 TAAAGCATTGTAGTGAAG
11 >MIT_Spar_c117_4603 YDR232W 5' untranslated region, Contig c117 17441 - 19440, 2000 bp (revcom)
12 ACTGAAAAAAAACCAAGTACTGTTGTGATTATTGAGGGACAACGGCTAGCTCTATTTGTT
13 TTCCTTCCAACCAAACTTATATGGGCAATATATAGGAAAGAAAAAAGAAAAGAGTAGGAT
14 AAAAAAAGAAACGCGAGCTGAGAAGAGAAGGCGTGTAAAGGAAGAACGGTTGAGAGAGAG
15 CAGAGCAGGGTGCAACACACAACCGAATAGAGTATCAGCTGACGGGATGGAGGAGTTTGG
16 TACGATGCAAACGCTATATTTGTAGCAACGCATGGGTCAGAACAATGGGCAAGGCAAGAT
17 GAAAAATTTCTGTTCCTGCTCTTTCTTCATATATGAACAATGACCAAAAAGCGCCCGCGG
18 CCGCAGACCAATGAGCGACGAAGGCGGCCTTTCCGAGTGGTAGGGTAAGCCGTGCAGGCA
19 AGCTTATTATAGCACCGTCGGGGGGACCACTATATCAAGTTCCACAGCACGGTGAAGCAT
20 TGCAGTATAGTTCACAGC
21 >MIT_Smik_c228_4055 YDR232W 5' untranslated region, Contig c228 4702 - 6701(revcom), 2000 bp (revcom)
22 ACCGAGAGAAAAACTAAGTAGTGATATGATTATTGAGGACTAATGACCAGCTTTGTTTGT
23 TTTTTCTTCCAACCTAACTTATATGGGAAATATATAGGACAGAAAAAAGAAAAGAGCACG
24 AAAAAAAAGAAATGCGACCTGAGAAGGGAGGACGTGTGAAGCCAGAACGGTTGAATGACA
25 GTAGAGGAGGGTGCAACACAACCGAGTAGAGTACCAGCTGACGGAATGGAGGAGTTTGGT
26 ATGATGCAAAAGTGATGCTTTTAGCAACGCAACATTGAATTAGAACAATGGGCAAGGCAA
27 GATGAAAATTTCCGTTCCTGCTCTTTCTTCATATATGAACAATGACCAAAAAGCGCCCGC
28 AAGCGCAGACCAATGAGCGACGAAAGCGGCCTTTTGAAGGGTAGGGTAATCCATGCAGGC
29 AAGTTTATTATAGCACCGTCGGGGGGAAGCATTATATCAAACTCCACAGTACAGCGTAAC
30 ATTGCTGTATAGGCTACA
31 >WashU_Skud_Contig2069.5 YDR232W 5' untranslated region, Contig c2069 5476 - 7475, 2000 bp (revcom)
32 ACTGAAAATAATCCGAGTCGTGCTACTGTGAATATTGAGAATAGGGACTAGCTCTATTTG
33 ATTTTTCTTCCAACCAAACTTATATGGAAAATATAAAGGAAAGAAAAAAGAAAAGAATAG
34 GAAAAAAAAAAAGAAACGCGAGAGAAGAGAACCGTGTGGAGGGAAGAACGGTTGAGAGAC
35 AGCAGAGCACAGCGCAACACAACCGAGTAGAGTACCAGCAGACGGAGTGGGTAGTTTGGT
36 ACAGTGTAAAAGCTATATTTCCACCAACGCAACACTGGATCGGAACAATGGGCAAGGCAA
37 TGTGAAAAATTTCCGTTCCTGCTCTTGCTTCATATATGACAATGACCAAAAAGCGTCCGC
38 GGCCGCAGACCAATGAGCGACGAAGGCGGCCTTTCGTAGCAGCAGGGTAAGCCGCGCAAG
39 CAAGTCCGTCATAACACCGTCGAAGGGGCACCACTATATCAGCTCTTCAGCATGGTAGGC
40 CATTACAGCACAGTCTTG
41 >WashU_Sbay_Contig461.5 YDR232W 5' untranslated region, Contig c461 4000 - 5999, 2000 bp (revcom)
42 ACTAAAAAGTCCAAGTGGTGCTGTTATTATTGAGGATAGCAACTAGCTTTATTTGTTTTT
43 TCTTCCAACCAAACTTATATGGAAATCAAAGGAAGGAAAAAAAGAAAAGAACAGGAAGAA
44 AAAAAAGAAACGTGAGCTGCCGAAAGGAGAGCGTGTGGAGGGAAGAACCGTTGAGAGACA
45 ACAGAGCAGGGTGCAAACCGATTAGAGTACCAGCAGACGAGATGGGCGATGTGGTACGGT
46 GCAGAAGGTGTGGTTCCAACAGCGCAGCACCGGGACAGAACAATGGGCAAGGCAAGATGA
47 AAAATCTCCGTTCCTGCTCTTGCTTGATATATTAACAATGACCAAAAAAACGCCGGCGGG
48 CGCAGACCAATGAGCGACGAAGACGGCTTTTGGGCGGGGCAGGGTAAGATGGGACAGGCA
49 AGGTCCGCTATAGCACCGTCGAGGGGGACCGCTATATCAGCTCCCAGTACATTGCAGCAC
50 ACTCTATAGCTAGTCAAA
51 >SGD_Scer_YGL040C HEM2 "Delta-aminolevulinate dehydratase, a homo-octameric enzyme, catalyzes the conversion of delta-aminolevulinic acid to porphobilinogen, the second step in the heme biosynthetic pathway; localizes to both the cytoplasm and nucleus"
52 GGTTTTGTCAATTTTCTAGGTATGAATTACTGGAGTAAGCAATAATATGAGTAAGCAGTA
53 AAACTTTTTTTTATTTGGCTGATTGGGCAAGAAAATCAAAGACAATAGAGTGGCGCATAG
54 ATGTTGCTAGCATTTATTAGGTTGCCTTACTCTTATATAAATCAAGCGGGAAGCTTGCCT
55 CAAGCCAATCACCGCACCGAACAGGGATTGCTCGTTTACCCGTATTTTGATTTTTTTTTC
56 ACCTTTTCCAATTTTTTTTTCGGCAACAATTTTTTGGATGATTTTTATCGTCGATCTTGG
57 AATGATGATGTATTTCGGCGTCTCTACAAGACCCAATAAAGTAATTCGGTGACACAGGCT
58 TGTAGCAGATAGAAAACGTTCCGAAAGATGGGTTCCAATTGATGTAACACTTCTTTTTTA
59 TATATTCATGTGGACGTGTACGCCTTCTTCCCTTCTTTGCCTCTTGTGCCACTGTTAATC
60 CTCTTAAGCATATTGTTTTTATTTACAGACATTGGCTGACTCACCAGAAACTATAATTGA
61 CGCTGATTTCTAGTTAATTAAAAATAAAATATATGCAAGAATTAGCACCAGGCAGTCATT
62 TCTGTAAATTGCTTTGTTTTCTATTTCAAATTTGTTTTTTGTATATGTTTCAATGTTCTC
63 GTGACAATGCAGGCTTTTTTTTGTGCGAATTAAAGTAAAGCTAATCAAAACTAAACAATA
64 ATTTATCTTGTTCCCGAAAGAGTGGATCATGAGGAGGAAAGCTAACCGTCCAAGATCCTA
65 TATAATTTTTGAACTGAAAACCAACTGTTCACCTAGAAGACAGGTATCTGGATATGTAAC
66 TACACGCTCTATAAATACAGAAATCGTAAGCTAATCAATATAAATGTAAAAGAAAATAGG
67 AATTGCTGTCGATAGATTTATTTACTTTTGTATTGTCATCTGTGTTCTGTGCCAGTACAC
68 CGGACTCGTATGAGCTGTATGGTGTCGTTTCAATAGAATC
69 >MIT_Spar_c19_8512 YGL040C 5' untranslated region, Contig c19 1 - 1802, 2000 bp (revcom)
70 GGTTTTGTCAATATTCTAAATATGGATTCCTAGGGCAGGCAATAATATGGGGAAGCAGTA
71 AAACTTTTTGTTTTATGTGGCTGATTGGGCCAAAAAACAAGGACAATAGAATGACACATA
72 AAGTTTGCTAGCATTTATTAGGTTGCCTTACTCTTTTATAAATCAAGCGGGCAGCTTGCC
73 TCAGGCCAATCACCGCACCGAACAGGGATTGCTCGTTTACCCGTAGTTTGAATTTTTTTT
74 TCACCTTTTGAAATTTTTTTTTTTCGGCAACAATTTTGAATGACTTTTATCGTCAATCTT
75 GGGAGTATACCTGCCTCTTTACAACACCCAACAAAACACTTAAGTAAGACAAGCTTGTGG
76 CAGGTAGGAAAGGTTTCAAAAAAAAAAAAAAGGTTTTTATCTATGGTCATACTTTTTCTT
77 CGTATATTTATGTGAACACGTACGTCTTGTTTTGCCTTCTTTGGCTCTTGTGTCACTGAA
78 TCTTCACATATTGTTTTTATTTACAGATACTACTTGACTCGCCTAAAATTATAATCGGCG
79 ATGGTTTCTACTACCTTAGTTAAAAAATAAAATGAATCAAAACATTACCATTAATAATTC
80 AATTTTTCCACATTAGTTTGTTTTCTATTTTATGGCTTTCTTCTTGTATATTTCTCAATA
81 TACTGCATGGCAATGCAAGCTCTTCTCTTTTCTTGATTGAAAATAAAGCTGTGAAGAACT
82 AAATAATAATTTATTGATGTCCTCCACAAAATGTACACCTGCGCTAACCTTGCTTAACAG
83 ATACGGTCAAAACGAACTTGAGCATATGTAAAAATCCATGTATTTTTCTTCTTTTGCCAA
84 CTAAATCAAACTTTTTATTGTATATGTCGTACCGCCAATACAAAGATGGAGAGGTTAATG
85 AAAATAGATGTGAAAAAAAAGCAGGAACTATTGTAGATAGATATTTTTAGGGTTCGATTG
86 CTATTTTTCTGTATTATGATCTGTGTTCTATGCCAGTGTA
87 >MIT_Smik_c273_7756 YGL040C 5' untranslated region, Contig c273 1 - 1807, 2000 bp (revcom)
88 GGTTTTACCAGTTTTCTTAATACGGATATCTAGAGTAAGTCACAATTTAAGGAAATTGCA
89 AAATTTTCTTTTTATATAGCTAAATAGGCCAATAAATCAGGAACAATAGAATGACGCACC
90 GAGTTTGCTAGCAACCTACACACTTGCTTTTTTTTATAAATCAAGAGTGTATGTTGCCTC
91 AGGCCAATCACCGCACCGAATAAGGATTGCTCGTTTACCCGTTGTTCGATTTTTTTTTTC
92 ATCTTCTACCAATTTTTTTCGGCAGCGCCTTTGAATGACTTTGATCATCAATCCTGGAGT
93 AATATACACTTGTATGTTTGAAACGCCCAGTTACAATATTTATTGGAATAGCTAACTTAT
94 GAGTAAGTGGACCCAAATTTTCGAGTGATGTTTCCTGTCAACGGTGACACTTATTTTTGG
95 TTTGCAGATATGTATGTGTATATCTTATTCCCACTTTTTTATAGTTATCGTTATCTATGT
96 ATCTCAATACCTTGGACATGAATCACCGAGTAGATATTTTTCTTTACAATGCTTAAAACA
97 AGGCCGCACAGAACTAAACAATAAAGTTACCTTGATCTTTAATAAAATATTCCCCCATTA
98 ATAAGTACTCTCTTCGATTACGATTTAGCCATATTCATTTTGACCATACATTGCAGATGT
99 GAGATGGATTTTAAGTGGTGAAAGCGCTCTAAGCTATGCCATATAAGTACGTAAGGAGAG
100 ACAAAATTAAACATAATTAAGCGCCATGTGAGACTAAATGTGGCCGTCGTTTTGATTATA
101 TGATTGGGAAAAGCTCCTAAACATAGAGGTAGAATTATAGTTCGGAAATTTCGTCTTGCC
102 CTGCTCATTTTGTAGAAAACGAGTCATCATCTCCACCCTTTGTAACCGGTGTCCTGCTCA
103 CATAAATAGTCTCTACTGAGAGATTTGTGAATTTCGAGATAATTTTTGGGATTCCATTGT
104 TGATAAAGGCAATATTATTAGGTATATAAAATATACTAGA
105 >MIT_Sbay_c77_8808 YGL040C 5' untranslated region, Contig c77 1 - 1377, 2000 bp (revcom)
106 ACTTTGTCAGTGTTTTTCTGGTAAGGATATCTGGAAGAAGTAACAATACGTATAAATTAC
107 AAAATTACCGTTTTATGTCGTGGAATGGGCTATGAACTAACATTAACAATAGAGTGATGC
108 ATAGACGTCACTAGCCTTTTATTGTGTTGCCTTGCTCTTTTATAAATCAGGCAGCCTGCC
109 GCAGGCCAATCACCGCACCGCCCGGAGATGCTCGTTTACCGTTGTGCACCAAATTTTTCA
110 TTTTTTGCCTTTTTCTATTTGGCAGCGTTTTCGAAAAATTTTGATCATTAGTCTTCAATG
111 ACTGGACTGTCATATTTTAGGGCACGCAGGTAAAGATATGAACAAATCATATTGATGATG
112 GATGCCAATCCTTCAATGTAAATTCTTTCTAAACATCATGATAAAGAACTTCAGTAAGAG
113 AGTGATAAAAACTTTACATGTATGGCGGGTGTATTCTGTAATTGTTTTTTAGATCTTTTT
114 GTTGTTAACGGTGACACCATTCTTACTACAATAATTGCATGTCAAATGTAAATATCTTGC
115 TTCACATTTCGTTGTTTCTTTACGATAAATTGTTTCGTCGCAAATATATCTTATTTTGCG
116 TGGTTTATCTACAGACACTGCTTGATTTACGCATAAGTACATCATGTAGTAATTCTTATA
117 TTGAGTATAAAACCATATGAATAGAAATATTTTTGTTAATCTATCGTTAATTTACATGCT
118 AGTTTATTTGTCCCTTTAAAATTTCTTTATATATTTGTTGCAATATGTGGACAAGGAAAC
119 ACGAAATATATTGGGATAAAGTTTAAGTAGAGATACATAGAACTAAACAATAAATTCATA
120 TTCAATAATACTTCAAAAGGTACTCTCCTGTCTGAACACAGAGACTCACAGACTTTATTT
121 AGTCGTTATGGCGATGTCAGACATCATGTTTAAGGTAAGCCGAGTGGATTGATATGAAAT
122 TGTCATATCATGAATAAGCTAATTACCCAAAAACAGTAAA
123 >WashU_Skud_Contig2052.17 YGL040C 5' untranslated region, Contig c2052 29967 - 31966, 2000 bp (revcom)
124 GATTTGTCAGTGTTTTCTGATATGGATGCCTGGAGAAAATATTAATATGTGGAAACCACA
125 AAACTTCCACTTATATAGCTAATTTAGCCAGAAATCATGAACAATAGGATGACGCATAGA
126 CGTCACTACTCTTCATATAAGTTGCCTTTCTCTTTTATAAATTGGGCAGGCAGCTTGCCT
127 CAGGCCAATCACCGCACCGAACAGGGATTGCTCGTTTACCCGTTGCGTTCAAAGTTTTTC
128 ATTTTCCGCATCATCTACTTTTTTTTTTTTGACGCCGTTTTTGAATGTCTTGGTCATTGA
129 TCTTGAAATGATTTATGTTCGTGTTTTCACGGCACAAAGGTAGGCAAATCGGTAAATTTT
130 ACTCGTAATAAATAATCAAGGCCTCTAGAGGATTTAATATCAGGAAATAATAATGTGAGT
131 TTTTTGCAAATGGCCTTATATTCCTGACATCTTCTTGAATTTGTGTTTTAGCGTCGATGA
132 AGACTCTTCCTTTTTTCGTACGGTAATCTGGACATCTTGTTTCGTCTTTTCTTTTTTTTT
133 TGCGATTGCTTGTAATTCCAGATATGCAGCATTTATTTACAGGTGCTGATTGATTTACTA
134 TAGAGTTTATCAGGTAGTAGTTCTTTTTCATGTCTCAATTGAAGAAAAGGAACCCATAAA
135 TACATTAGCACTGAACAAACAATAACTGCCGCATTGGTTTGTTTTCTAACTTGAATTTTT
136 CTTTATACATATGCCACTGTATTAGGATGGGTGAATACCGTTTTCTTACTTTCTTCCTAT
137 GAAGGCGAAAGAATGGTGAAGGACAACTAAACAATAAATCGTTTTTCACACATCCCCATA
138 AAGCTTTCTCTGTTTGTCAGTTGTGACTCATCTTTCGTCGATGTTGCTTGGTAGATACAA
139 TTGAACAAGATTGAGATATCTAAAATGTTCAAAAATTATACTCTCTTATGTAGTTTCCGT
140 CATGGCTGAACGAAGGAAAACTACATCACCTGAGAATTAC